View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2784-Insertion-9 (Length: 558)
Name: NF2784-Insertion-9
Description: NF2784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2784-Insertion-9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 539; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 8 - 558
Target Start/End: Original strand, 49123447 - 49123997
Alignment:
| Q |
8 |
acgacttgcctttcgggctctattctccagagaggtgttgccccaaagcttttcacctcctcatgatttgataagtaaggataatcagatggacagcatg |
107 |
Q |
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| T |
49123447 |
acgacttgcctttcgggctctattctccagagaggtgttgccccaaagcttttcacctcctcatgatttgataaataaggataatcagatggacaacatg |
49123546 |
T |
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| Q |
108 |
aaggataacgagcaaaaaacagaccacaaagatcaccttgagagcaagaaatgcatttgtaattgtgaccaggcacagcaaaacctaccatttgtacaaa |
207 |
Q |
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| T |
49123547 |
aaggataacgagcaaaaaacagaccacaaagatcaccttgagagcaagaaatgcatttgtaattgtgaccaggcacagcaaaacctaccatttgtacaaa |
49123646 |
T |
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| Q |
208 |
ataacaatgaggagggatttctaaccatgggtcttggacaaggtaagcttaagactcgtcgaacagggttcaaaccttacaaaagatgtttagtagaggc |
307 |
Q |
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| T |
49123647 |
ataacaatgaggagggatttctaaccatgggtcttggacaaggtaaacttaagactcgtcgaacagggttcaaaccttacaaaagatgtttagtagaggc |
49123746 |
T |
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| Q |
308 |
caaggaaaacaggggcggaacggcttgcaaccaagttgaagagacgggtcccaagaggatacgcctggaaggggggacttctatttgatgcttgatatat |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49123747 |
caaggaaaacaggggcggaacggcttgcaaccaagttgaagagacgggtcccaagaggatacgcctggaaggggggacttctatttgatgcttgatatat |
49123846 |
T |
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| Q |
408 |
gcatgcaatcacgcaaagaaaatctttgagttttgtgcatcatttctaactacctcttggtgtctgtattgttaattttctaattcggcagctcatgaaa |
507 |
Q |
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| T |
49123847 |
gcatgcaatcacgcaaagaaaatctttgagttttgtgcatcatttctaactacctcttggtgtctgtattgttaattttctaattcggcagctcatgaaa |
49123946 |
T |
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| Q |
508 |
cttgtcgtgtaggtgtgtgtaccatattaaattactacctacgttctttta |
558 |
Q |
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| T |
49123947 |
cttgtcgtgtaggtgtgtgtaccatattaaattactacctacgttctttta |
49123997 |
T |
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