View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2784R-Insertion-2 (Length: 765)

Name: NF2784R-Insertion-2
Description: NF2784R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2784R-Insertion-2
NF2784R-Insertion-2
[»] chr1 (22 HSPs)
chr1 (9-297)||(43566163-43566454)
chr1 (9-245)||(43473848-43474084)
chr1 (472-645)||(30054445-30054618)
chr1 (471-647)||(30370061-30370237)
chr1 (471-648)||(45323961-45324138)
chr1 (478-645)||(21090077-21090244)
chr1 (472-648)||(12025137-12025313)
chr1 (472-648)||(20014414-20014590)
chr1 (508-647)||(30850841-30850980)
chr1 (496-648)||(4573359-4573511)
chr1 (543-650)||(22024130-22024237)
chr1 (316-473)||(43566481-43566646)
chr1 (472-648)||(33763254-33763430)
chr1 (545-648)||(14498079-14498182)
chr1 (478-645)||(35617942-35618104)
chr1 (560-639)||(35371754-35371833)
chr1 (543-648)||(33762540-33762645)
chr1 (672-754)||(43566634-43566716)
chr1 (505-645)||(44438553-44438693)
chr1 (588-650)||(17015192-17015254)
chr1 (472-562)||(15034411-15034501)
chr1 (574-644)||(17291828-17291897)
[»] chr7 (19 HSPs)
chr7 (472-648)||(35109647-35109823)
chr7 (472-650)||(38265235-38265413)
chr7 (478-648)||(21577098-21577268)
chr7 (469-645)||(16059356-16059532)
chr7 (472-648)||(34721790-34721966)
chr7 (483-644)||(41151139-41151301)
chr7 (478-645)||(38405157-38405324)
chr7 (471-645)||(18116947-18117121)
chr7 (470-643)||(11216723-11216896)
chr7 (478-648)||(45278414-45278584)
chr7 (510-644)||(12472115-12472249)
chr7 (543-648)||(37095210-37095315)
chr7 (529-648)||(245264-245383)
chr7 (478-645)||(48176362-48176529)
chr7 (554-648)||(28407546-28407636)
chr7 (517-648)||(23028684-23028815)
chr7 (554-644)||(24123021-24123117)
chr7 (606-648)||(39234853-39234895)
chr7 (471-525)||(40038620-40038674)
[»] chr3 (29 HSPs)
chr3 (472-648)||(8400811-8400987)
chr3 (469-648)||(7417751-7417930)
chr3 (478-648)||(35198727-35198897)
chr3 (507-648)||(50823689-50823830)
chr3 (507-648)||(50852030-50852171)
chr3 (471-648)||(22855842-22856019)
chr3 (470-645)||(34824510-34824685)
chr3 (470-648)||(52545275-52545453)
chr3 (481-645)||(55467964-55468129)
chr3 (487-645)||(43334057-43334215)
chr3 (478-612)||(48077977-48078111)
chr3 (545-649)||(22371728-22371832)
chr3 (563-648)||(37330607-37330692)
chr3 (563-655)||(30534895-30534987)
chr3 (543-648)||(29635895-29636001)
chr3 (563-648)||(37454744-37454829)
chr3 (505-642)||(50726003-50726140)
chr3 (505-642)||(50786708-50786845)
chr3 (545-648)||(19872483-19872586)
chr3 (490-644)||(42876189-42876343)
chr3 (576-648)||(25910666-25910738)
chr3 (548-648)||(25589253-25589346)
chr3 (555-645)||(30203657-30203744)
chr3 (488-579)||(5548970-5549061)
chr3 (605-648)||(773666-773709)
chr3 (598-643)||(31297529-31297574)
chr3 (573-648)||(39438829-39438903)
chr3 (601-650)||(358940-358989)
chr3 (576-644)||(14848552-14848620)
[»] chr4 (28 HSPs)
chr4 (471-645)||(51066448-51066622)
chr4 (471-645)||(46494401-46494575)
chr4 (471-648)||(7173585-7173762)
chr4 (492-648)||(36192517-36192673)
chr4 (496-648)||(51713965-51714117)
chr4 (471-648)||(39863778-39863955)
chr4 (476-644)||(32139124-32139292)
chr4 (496-648)||(30970384-30970536)
chr4 (471-618)||(8740403-8740550)
chr4 (470-648)||(50905702-50905880)
chr4 (480-645)||(2294719-2294878)
chr4 (545-648)||(29576444-29576547)
chr4 (544-648)||(55231715-55231819)
chr4 (572-648)||(22304091-22304167)
chr4 (554-648)||(676766-676860)
chr4 (531-648)||(2570216-2570333)
chr4 (510-648)||(47626993-47627133)
chr4 (543-645)||(41523424-41523526)
chr4 (554-646)||(51279035-51279127)
chr4 (553-648)||(4080552-4080647)
chr4 (511-619)||(22423371-22423479)
chr4 (526-650)||(50399640-50399764)
chr4 (583-645)||(23084468-23084530)
chr4 (580-644)||(37990599-37990663)
chr4 (602-645)||(51066240-51066283)
chr4 (553-644)||(40012550-40012640)
chr4 (595-640)||(28202598-28202643)
chr4 (561-642)||(28202701-28202782)
[»] chr5 (12 HSPs)
chr5 (472-648)||(17064279-17064455)
chr5 (472-645)||(20983006-20983179)
chr5 (505-648)||(37976535-37976682)
chr5 (483-648)||(41910793-41910956)
chr5 (553-643)||(31673867-31673956)
chr5 (472-568)||(35237103-35237199)
chr5 (713-765)||(33001304-33001356)
chr5 (533-648)||(5009417-5009531)
chr5 (553-644)||(39162859-39162947)
chr5 (605-648)||(35237059-35237102)
chr5 (592-647)||(38255559-38255614)
chr5 (711-765)||(33014624-33014677)
[»] chr2 (24 HSPs)
chr2 (469-648)||(44650346-44650525)
chr2 (472-648)||(17136343-17136519)
chr2 (478-648)||(2754051-2754221)
chr2 (471-648)||(40155995-40156172)
chr2 (467-648)||(10745232-10745413)
chr2 (472-648)||(5039376-5039552)
chr2 (472-639)||(6672802-6672969)
chr2 (471-648)||(2357076-2357252)
chr2 (472-648)||(25987661-25987838)
chr2 (488-648)||(21637869-21638029)
chr2 (469-648)||(36380132-36380311)
chr2 (509-648)||(45136970-45137109)
chr2 (505-648)||(36836329-36836472)
chr2 (470-648)||(7860146-7860324)
chr2 (472-646)||(30372682-30372856)
chr2 (472-648)||(26690110-26690286)
chr2 (543-648)||(558439-558544)
chr2 (508-648)||(33066582-33066722)
chr2 (481-648)||(3200847-3201013)
chr2 (472-649)||(13047155-13047324)
chr2 (471-648)||(21487105-21487281)
chr2 (473-645)||(4553561-4553734)
chr2 (599-648)||(2098826-2098875)
chr2 (472-549)||(2098939-2099016)
[»] chr6 (9 HSPs)
chr6 (478-648)||(35163750-35163920)
chr6 (471-648)||(2711740-2711911)
chr6 (475-648)||(19686827-19687000)
chr6 (543-648)||(20685352-20685457)
chr6 (543-648)||(17948707-17948812)
chr6 (542-645)||(15070151-15070254)
chr6 (470-648)||(14505525-14505700)
chr6 (478-570)||(14496314-14496406)
chr6 (543-619)||(24336642-24336718)
[»] chr8 (21 HSPs)
chr8 (472-648)||(19723267-19723443)
chr8 (468-648)||(11403953-11404133)
chr8 (469-648)||(4840093-4840272)
chr8 (472-648)||(22711465-22711641)
chr8 (472-648)||(32296639-32296815)
chr8 (473-645)||(28739564-28739736)
chr8 (505-648)||(29767177-29767318)
chr8 (543-645)||(17095577-17095679)
chr8 (492-648)||(41553261-41553417)
chr8 (470-648)||(11610234-11610412)
chr8 (472-615)||(24475029-24475172)
chr8 (472-648)||(30682795-30682970)
chr8 (553-648)||(36261683-36261778)
chr8 (471-592)||(27881044-27881165)
chr8 (471-592)||(28021225-28021346)
chr8 (545-628)||(21355004-21355087)
chr8 (562-645)||(11909426-11909509)
chr8 (553-644)||(43288109-43288200)
chr8 (588-648)||(27879560-27879620)
chr8 (588-648)||(28019741-28019801)
chr8 (601-644)||(44741924-44741967)
[»] scaffold0021 (1 HSPs)
scaffold0021 (469-648)||(107692-107870)
[»] scaffold0691 (1 HSPs)
scaffold0691 (518-623)||(6994-7099)


Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 9 - 297
Target Start/End: Original strand, 43566163 - 43566454
Alignment:
Q  9 gctttcgactagaattccatgcaaatccagtattccaaatacgcctatttttgtagtctaaggcgatgaatttggaaacggtttgcttctcttgttcttc 108  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43566163 gctttcgaccagaattccatgcaaatccactattccaaatacgcctatttttgtagtctaaggcgatgaatttggaaacggtttgtttctcttgttcttc 43566262  T
Q  109 aagagggaaatcatgtaacttcattctgtattcatctatctgacattggagattggggcagatattcttcccctcaactttattcttcttaccatcaacc 208  Q
    ||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43566263 aagggagaaatcatttaacttcattctgtattcatctatctgacattggagattggggcagatattcttcccctcaactttattcttcttaccatcaacc 43566362  T
Q  209 attgaattcattgagtttgtttgaaagtgaagaacgc---atgagagagtgatattgttagggttaagggagagtgtgcacttatatgggat 297  Q
    ||||||||||||||||||||||||||||||||  |||   |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43566363 attgaattcattgagtttgtttgaaagtgaagggcgcgcaatgagagagtgatattgttagggttaagggagagtgtgcatttatatgggat 43566454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 43474084 - 43473848
Alignment:
Q  9 gctttcgactagaattccatgcaaatccagtattccaaatacgcctatttttgtagtctaaggcgatgaatttggaaacggtttgcttctcttgttcttc 108  Q
    ||||| |||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||    
T  43474084 gcttttgactagaattccatgcaaatccatgactccgaatacgcctatttttgtagtctaaggcgatgaagttgaaaacggtttgtttctcttcttcttc 43473985  T
Q  109 aagagggaaatcatgtaacttcattctgtattcatctatctgacattggagattggggcagatattcttcccctcaactttattcttcttaccatcaacc 208  Q
    ||||| ||||||||||||||||||||| ||||||||||||||   ||||||||| |||||||||||||||| |||||||| ||| ||| ||| | |||||    
T  43473984 aagagagaaatcatgtaacttcattctatattcatctatctggagttggagattagggcagatattcttcctctcaacttcatttttcctactaccaacc 43473885  T
Q  209 attgaattcattgagtttgtttgaaagtgaagaacgc 245  Q
    |||||||||| | | ||| ||||||||||||| ||||    
T  43473884 attgaattcacttaatttatttgaaagtgaaggacgc 43473848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 472 - 645
Target Start/End: Complemental strand, 30054618 - 30054445
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||||||||| |  | ||||||||||||||||||| ||||||||||| ||  ||||||||| |||||||||||||||||||    
T  30054618 aactccaaaggcttggtctagtggtaaaaagtcaagtcttgaatccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaat 30054519  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30054518 tacctttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 30054445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 471 - 647
Target Start/End: Complemental strand, 30370237 - 30370061
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||||||||||||||||||||| || | || |||||| ||||||||  ||||||||||| ||| ||||| ||| ||||||||||||||||||    
T  30370237 taactccaaaggcttggtctagtggtaaaaagacaagttttgaattcgagagaatccgggttcgagccccactagtgtctttggagggaggtaaatgtaa 30370138  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatt 647  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30370137 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccttaaaatt 30370061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 471 - 648
Target Start/End: Original strand, 45323961 - 45324138
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||||||||  |||||| ||| ||  |||||| || ||||||||||||||||||    
T  45323961 taactccaaaggcttggtctagtggtaaaacgacaggtcttgaatccgagagaacctgggttccagccccgctagtgcttttggagggaggtaaatgtaa 45324060  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45324061 atacctttgtaagtgctccttgagcccgaaggtcttccctgctttggactggggcaccatcccctcaccctaaaattt 45324138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 478 - 645
Target Start/End: Original strand, 21090077 - 21090244
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| ||  ||||||| | |||||||||||||||||| ||| ||    
T  21090077 aaaggcttggtctagtggtaaaatgacaggtcttgaattcgagagaattcgggttcgagccccgctagtgccgttggagggaggtaaatgtaaatacatt 21090176  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21090177 tgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcactctaaaa 21090244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 12025137 - 12025313
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| |||| ||||||||||||||||||  | || |||||||| |||||||||  |||||||||| ||||||||||||| ||||| |||||||||||||    
T  12025137 aactccaaagacttggtctagtggtaaaaatacagatcttgaattcgagagaacctgggttcgagccccattagtgcctttggaggaaggtaaatgtaat 12025236  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12025237 tacctttgtaagtactatttgagcccgaaggtcttccctgccttggactggggcaccaccccctcaccctaaaattt 12025313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 20014414 - 20014590
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| |||| |||||||||||||||||| || || |||||||||||||||||| ||||||||||  ||  |||| |||| |||||||||||||||||||    
T  20014414 aactccaaagtcttggtctagtggtaaaaagacagatcttgaatccgagagaacccgggttcgagtcccgctagtacctttggagggaggtaaatgtaat 20014513  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||| ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20014514 tacatttgtaaatgctctttgagcctgaaggtcttccctgccttggactgaggcaccatcccctcaccctaaaattt 20014590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 508 - 647
Target Start/End: Complemental strand, 30850980 - 30850841
Alignment:
Q  508 tcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttc 607  Q
    |||| ||||||||||||||||||||||||| || |||||| ||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||     
T  30850980 tcttaaatccgagagaactcgggttcgagccccgttagtgtctttggagggaggtaaatataattgcctttgtaagtgctctttgaacccgaaggtcttt 30850881  T
Q  608 cctgccttggactggggcaccatcccctcaccctaaaatt 647  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  30850880 cctgtcttggactggggcaccatcccctcaccctaaaatt 30850841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 496 - 648
Target Start/End: Original strand, 4573359 - 4573511
Alignment:
Q  496 taaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagc 595  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| || || ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  4573359 taaaaagacaggtcttgaatccgagagaacccgggttcgagccccactaatgtctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagc 4573458  T
Q  596 ccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     |||||||||||||||  |||||||| ||||| ||||||||||||||||||||    
T  4573459 tcgaaggtcttccctgttttggactgaggcactatcccctcaccctaaaattt 4573511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 543 - 650
Target Start/End: Original strand, 22024130 - 22024237
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22024130 tagtgcctttggatggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttctctgccttggactggggcaccatcccctcacccta 22024229  T
Q  643 aaatttat 650  Q
    ||||||||    
T  22024230 aaatttat 22024237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 316 - 473
Target Start/End: Original strand, 43566481 - 43566646
Alignment:
Q  316 gctattttgccctttgtaacttgattgatcccacacaacaacctgctttcgataatataaaagagtaaattnnnnnnnntccccgttaacttatctc--- 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||       
T  43566481 gctattttgccctttgtaacttgattgatcccacacaacaacctgctttcgataatataaaagagtaaatt-aaaaaaatccccgttaacttatctcagg 43566579  T
Q  413 -----aggttcgaaccccgacacctcacttctcca-ttttttagcttctaaaaccacgtctaattaa 473  Q
         ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  43566580 ggccgaggttcgaaccccgacaccccacttctccatttttttagcttttaaaaccacgtctaattaa 43566646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 472 - 648
Target Start/End: Complemental strand, 33763430 - 33763254
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||| |||||||||| |||||| || ||||||||||| ||||||||    ||||||||| ||  |||||||||  |||||||| |||||||||    
T  33763430 aactctaaaggtttggtctagtagtaaaaagacaggtcttgaattcgagagaatctaggttcgagccccgctagtgcctttagagggaggcaaatgtaat 33763331  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||| | |||||||||||| || |||||||||||| ||||||||| |||||||||||||||||||||    
T  33763330 tacctttgtaagtgttttttgagcccgaaagttttccctgccttgaactggggcatcatcccctcaccctaaaattt 33763254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 545 - 648
Target Start/End: Complemental strand, 14498182 - 14498079
Alignment:
Q  545 gtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14498182 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagaccaaaggtcttccctgccttggactggggcgccatcccctcaccctaaa 14498083  T
Q  645 attt 648  Q
    ||||    
T  14498082 attt 14498079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 478 - 645
Target Start/End: Original strand, 35617942 - 35618104
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||   | |||||||||| ||||||||||   ||||| |||||||||     |||    
T  35617942 aaaggtttggtctagtggtaaaatgacaggtcttgaatccaagagaacctagattcgagctccgttagtgcctttc-agggatgtaaatgtag----ctt 35618036  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  35618037 tgtaagtgctctttgagcccgaaggtcttccttgctttggactggggtaccatcccctcaccctaaaa 35618104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 560 - 639
Target Start/End: Complemental strand, 35371833 - 35371754
Alignment:
Q  560 ggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacc 639  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35371833 ggtaaatgtaattacctttgtaagtgctctttgagcccgaagttcttccctgccttggactggggcaccatcccctcacc 35371754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 543 - 648
Target Start/End: Complemental strand, 33762645 - 33762540
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    |||||||||  |||||||| ||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  33762645 tagtgcctttagagggaggcaaatgtaattacctttgtaagtgttttttgagcccgaaagttttccctgccttggactggggcatcatcccctcacccta 33762546  T
Q  643 aaattt 648  Q
    ||||||    
T  33762545 aaattt 33762540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 672 - 754
Target Start/End: Original strand, 43566634 - 43566716
Alignment:
Q  672 cacgtctaattaatcttcaatctagttataggacattaattatgggaaatactatttaacgcgagaaaataatcccgaccttg 754  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43566634 cacgtctaattaatcttcactttagttgtaggacattaattatgggaaatactatttaacgcgagaaaataatcccgaacttg 43566716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 505 - 645
Target Start/End: Complemental strand, 44438693 - 44438553
Alignment:
Q  505 aggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtc 604  Q
    |||||||||||   |||||| | |||||||||||||  || |||||| |||||||||||||||||||||| |||||||||| ||||| |   ||||||||    
T  44438693 aggtcttgaatttaagagaatttgggttcgagctccgctaatgcctttggagggaggtaaatgtaattacttttgtaagtgttctttaaattcgaaggtc 44438594  T
Q  605 ttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||||||||||| ||||||| ||||||||||| || |||||    
T  44438593 ttccctgccttgaactggggtaccatcccctcgccttaaaa 44438553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 17015192 - 17015254
Alignment:
Q  588 ctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttat 650  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  17015192 ctttgagcccgaaggtcttccctgctttggactggggcaccatcccctcatcctaaaatttat 17015254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 472 - 562
Target Start/End: Original strand, 15034411 - 15034501
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggt 562  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||| ||||| | ||||||||| | | ||||||||| ||||||||||    
T  15034411 aactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgaaagaacccaggttcgagccctactagtgcctttggagggaggt 15034501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 574 - 644
Target Start/End: Complemental strand, 17291897 - 17291828
Alignment:
Q  574 cctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    ||||||||| |||||||||| || ||||||||| ||||||||||||| |||   ||||||| |||||||||    
T  17291897 cctttgtaaatgctctttgaaccagaaggtctt-cctgccttggactagggtgacatccccgcaccctaaa 17291828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 3e-78; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 35109647 - 35109823
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||    
T  35109647 aactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaat 35109746  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35109747 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 35109823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 472 - 650
Target Start/End: Complemental strand, 38265413 - 38265235
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||  |||||||||| ||  ||||||||| |||||||||||||||||||    
T  38265413 aactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacctgggttcgagccccgctagtgcctttggagggaggtaaatgtaat 38265314  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttat 650  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38265313 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttat 38265235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 478 - 648
Target Start/End: Complemental strand, 21577268 - 21577098
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||| || |||||| |||||||||||||||||| ||||||    
T  21577268 aaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccactaatgcctttggagggaggtaaatgtaaatacctt 21577169  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21577168 tgtaagtgctctttgagtccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 21577098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 469 - 645
Target Start/End: Complemental strand, 16059532 - 16059356
Alignment:
Q  469 attaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgt 568  Q
    |||||||| |||||||||| |||||||||||| || ||||||||||||||||||||| ||||||||||| ||  ||||||||| | ||||||||||||||    
T  16059532 attaactccaaaggcttggactagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccgctagtgcctttgcagggaggtaaatgt 16059433  T
Q  569 aattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16059432 aattacctttgtaagtgctctctgagcccgaaggtcttccctaccttggactggggcaccatcccctcaccctaaaa 16059356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 34721790 - 34721966
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||| ||| ||| ||  ||||||||| |||||||||||||||||||    
T  34721790 aactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccggattcaagccccgctagtgcctttggagggaggtaaatgtaat 34721889  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  34721890 tacctttgtaagtgctctttgagcccgaaggacttccctgccttggactcgggcaccatcccctcaccctaaaattt 34721966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 483 - 644
Target Start/End: Original strand, 41151139 - 41151301
Alignment:
Q  483 cttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattaccttt-gta 581  Q
    |||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||  ||||| ||| |||||||||||||||||||||||||| |||    
T  41151139 cttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccgctagtgtctttggagggaggtaaatgtaattaccttttgta 41151238  T
Q  582 agtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41151239 agtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 41151301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 478 - 645
Target Start/End: Complemental strand, 38405324 - 38405157
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    |||||||| |||||||||||||| || |||||||||||||||||||| ||| ||||||||  |  ||||||||| ||||||||||||||||||||| |||    
T  38405324 aaaggcttcgtctagtggtaaaaagacaggtcttgaatccgagagaattcgagttcgagcctcgctagtgcctttggagggaggtaaatgtaattatctt 38405225  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38405224 tgtaagtgctctttgaacccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 38405157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 471 - 645
Target Start/End: Complemental strand, 18117121 - 18116947
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||||||| ||||||||||||| || ||||||||||||||||||||| |||||||||||  |  |||||||||  |||||||||||||||||    
T  18117121 taactccaaaggcttgttctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccacgctagtgcctttagagggaggtaaatgtaa 18117022  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18117021 ttacctttgtaggtgctctttgaggtcgaagatcttccctgccttggactggggcaccatcccctcaccctaaaa 18116947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 470 - 643
Target Start/End: Original strand, 11216723 - 11216896
Alignment:
Q  470 ttaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgta 569  Q
    ||||||| ||||| |||||||||||||||| ||| |||||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  11216723 ttaactccaaaggtttggtctagtggtaaagtgacaggtcttgaatctgagagaacccgggttcgagccccattagtgcctttggagggaggtaaatgta 11216822  T
Q  570 attacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaa 643  Q
    | |||||||||||||||||||||||||||||||||||| || | ||||||| ||||| ||| ||||||||||||    
T  11216823 aatacctttgtaagtgctctttgagcccgaaggtcttctctactttggactagggcatcattccctcaccctaa 11216896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 478 - 648
Target Start/End: Original strand, 45278414 - 45278584
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||  ||||||||| | ||||| ||||||||||||| |||    
T  45278414 aaagtcttggtctagtggtaaaaagataggtcttgaatccgagataacccgggttcgagccccgctagtgcctttgaagggaagtaaatgtaattatctt 45278513  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  45278514 tgtaagtgctctttaaacccgaatgtcttccctgccttggactggagcaccatcccctcaccctaaaattt 45278584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 510 - 644
Target Start/End: Original strand, 12472115 - 12472249
Alignment:
Q  510 ttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccc 609  Q
    |||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  12472115 ttgaatccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatataattacctttgtaagtgctctttgagcacgaaggtcttccc 12472214  T
Q  610 tgccttggactggggcaccatcccctcaccctaaa 644  Q
    || |||||||||||| |||||||||||||||||||    
T  12472215 tgtcttggactggggtaccatcccctcaccctaaa 12472249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 543 - 648
Target Start/End: Complemental strand, 37095315 - 37095210
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37095315 tagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 37095216  T
Q  643 aaattt 648  Q
    ||||||    
T  37095215 aaattt 37095210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 529 - 648
Target Start/End: Complemental strand, 245383 - 245264
Alignment:
Q  529 ggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacc 628  Q
    ||||||||| ||  ||||||| | ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  245383 ggttcgagccccgctagtgcccttggagggaggtaaatgtaattatctttgtaaacgctctttgagcccgaaggtcttccctgccttggactggggcacc 245284  T
Q  629 atcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||    
T  245283 atcccctcaccctaaaattt 245264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 478 - 645
Target Start/End: Original strand, 48176362 - 48176529
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    |||||||||||||| |||||||| || || |||| ||||||||||||  ||||||||||| ||  ||||||||| ||| |||||||||||||| ||| ||    
T  48176362 aaaggcttggtcta-tggtaaaaagacagatcttaaatccgagagaatccgggttcgagccccgctagtgcctttggaaggaggtaaatgtaaatacttt 48176460  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccct-gccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||||||| | |||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  48176461 tgtaagtgttttttgagccggaaggttttccctccccttggactggggcaccatcccctcaccctaaaa 48176529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 554 - 648
Target Start/End: Original strand, 28407546 - 28407636
Alignment:
Q  554 gagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||    |  |||||||| |||||||||||||||||||||||||||||    
T  28407546 gagggaggtaaatgtaaatacttttgtaagtgctctttgagcccgaaggt----caagccttggattggggcaccatcccctcaccctaaaattt 28407636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 648
Target Start/End: Original strand, 23028684 - 23028815
Alignment:
Q  517 cgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttg 616  Q
    ||||||||  ||||||||| ||||  || ||||||  |||||| |||||||||||||||||| |||||| | ||||| |||||||| ||||||| ||||     
T  23028684 cgagagaatccgggttcgaactcctctaatgcctttagagggatgtaaatgtaattacctttataagtgttttttgaacccgaaggccttccctacctta 23028783  T
Q  617 gactggggcaccatcccctcaccctaaaattt 648  Q
    ||||| | |||||||| |||| ||||||||||    
T  23028784 gactgagacaccatcctctcatcctaaaattt 23028815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 554 - 644
Target Start/End: Original strand, 24123021 - 24123117
Alignment:
Q  554 gagggaggtaaatgtaattacctttgtaagtgctctttgagcc------cgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    |||| ||||||||||||||||||||||||||  |||||||  |      ||||||||||| |||||||||| |||| |||||||| |||||||||||    
T  24123021 gaggaaggtaaatgtaattacctttgtaagtattctttgaatctgaattcgaaggtcttctctgccttggattgggtcaccatcctctcaccctaaa 24123117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 648
Target Start/End: Original strand, 39234853 - 39234895
Alignment:
Q  606 tccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  39234853 tccctgccatggactggggcaccatcccctcacccaaaaattt 39234895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 471 - 525
Target Start/End: Original strand, 40038620 - 40038674
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaac 525  Q
    |||||| |||| |||| ||||||||||||| || |||||||||||| ||||||||    
T  40038620 taactccaaagacttgatctagtggtaaaaagacaggtcttgaatctgagagaac 40038674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 6e-76; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 8400811 - 8400987
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||  ||||||||| |||||||||||||||||||    
T  8400811 aactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaat 8400910  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8400911 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 8400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 469 - 648
Target Start/End: Original strand, 7417751 - 7417930
Alignment:
Q  469 attaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgt 568  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||  ||||||||| ||||||||||||||||    
T  7417751 attaactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgt 7417850  T
Q  569 aattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7417851 aattacctttgtaagtgctctttgagcccgaaggtcttcactgccttggactggggcaccatcccctcaccctaaaattt 7417930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 478 - 648
Target Start/End: Original strand, 35198727 - 35198897
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||| || |||||| | |||||||||||||||| ||||||    
T  35198727 aaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccactaatgcctttgcagggaggtaaatgtaaatacctt 35198826  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35198827 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggagcaccatcccctcaccctaaaattt 35198897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 507 - 648
Target Start/End: Original strand, 50823689 - 50823830
Alignment:
Q  507 gtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 606  Q
    ||||||||||||||||||  ||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50823689 gtcttgaatccgagagaatccgggttcgagtcccgttagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 50823788  T
Q  607 ccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  50823789 ccctgccttggactggggcaccatcccctcaccctaaaattt 50823830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 507 - 648
Target Start/End: Complemental strand, 50852171 - 50852030
Alignment:
Q  507 gtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 606  Q
    ||||||||||||||||||  ||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50852171 gtcttgaatccgagagaatccgggttcgagtcccgttagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 50852072  T
Q  607 ccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  50852071 ccctgccttggactggggcaccatcccctcaccctaaaattt 50852030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 471 - 648
Target Start/End: Original strand, 22855842 - 22856019
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||| ||||||||||||||||| || ||||||| ||| ||||||||| | ||||||||| ||  ||||| ||| ||||||||||||||||||    
T  22855842 taactccaaaggtttggtctagtggtaaaaagacaggtcttaaattcgagagaacccaggttcgagccccgctagtgtctttggagggaggtaaatgtaa 22855941  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22855942 ttacctttgtaagtgctctttaagcccaaaggtcttccctgccttggactggagcaccatcccctcaccctaaaattt 22856019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 470 - 645
Target Start/End: Original strand, 34824510 - 34824685
Alignment:
Q  470 ttaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgta 569  Q
    ||||||| ||||  ||||||||||||||||| ||||| ||||||||||||||||||  | |||||||  || |||||||||| | |||||||||||||||    
T  34824510 ttaactccaaagatttggtctagtggtaaaaagatagatcttgaatccgagagaacctgagttcgagtcccgttagtgcctttgaagggaggtaaatgta 34824609  T
Q  570 attacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34824610 attatctttgtaagtgctctttgatcccgaaggtcttcccggccttggactggggcaccatcccctcaccctaaaa 34824685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 470 - 648
Target Start/End: Original strand, 52545275 - 52545453
Alignment:
Q  470 ttaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgta 569  Q
    ||||||| ||||| ||||||| ||| |||||||| ||||||||||||||||| || |||||||||||| ||  |||||||||   |||||||||||||||    
T  52545275 ttaactcgaaaggtttggtctggtgataaaatgacaggtcttgaatccgagaaaattcgggttcgagccccgctagtgcctttaaagggaggtaaatgta 52545374  T
Q  570 attacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    | ||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52545375 aatacttttgtaagtagtctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 52545453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 481 - 645
Target Start/End: Original strand, 55467964 - 55468129
Alignment:
Q  481 ggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgt 580  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||  ||||||||||| ||| || ||| || |||||||||||||||||| |||||||||    
T  55467964 ggcttggtctagtggtaaaatgacatgtcttgaattcgagagaatccgggttcgagccccactaatgcgtttggagggaggtaaatgtaaatacctttgt 55468063  T
Q  581 aagtgctctttgag-cccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55468064 aagtgctctttgagccccgaaggtcttctctgccttggactggggcaccatcccctcaccctaaaa 55468129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 487 - 645
Target Start/End: Complemental strand, 43334215 - 43334057
Alignment:
Q  487 gtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgc 586  Q
    |||||| |||||||||| | || |||||||||||||||| || |||||||| ||  ||||| ||| |||||||||||||||||| ||| |||||||||||    
T  43334215 gtctagaggtaaaatgacaagttttgaatccgagagaacccgagttcgagccccgctagtgtcttgggagggaggtaaatgtaaatacttttgtaagtgc 43334116  T
Q  587 tctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43334115 tatttgagcccgaaggtcttccctgccttggactggggtaccatcccctcaccctaaaa 43334057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 478 - 612
Target Start/End: Complemental strand, 48078111 - 48077977
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  || ||||||||| ||||| |||||||||||| || |||    
T  48078111 aaaggcttggtctagtggtaaaatgacaggtcttgaattcgagagaactcgggttcgagcctcactagtgcctttggaggaaggtaaatgtaaatatctt 48078012  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgc 612  Q
    ||||||||||||||||||| |||||||||||||||    
T  48078011 tgtaagtgctctttgagcctgaaggtcttccctgc 48077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 545 - 649
Target Start/End: Complemental strand, 22371832 - 22371728
Alignment:
Q  545 gtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  22371832 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaagatcttccctgctttagactggggcaccatcccctcaccctaaa 22371733  T
Q  645 attta 649  Q
    |||||    
T  22371732 attta 22371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 563 - 648
Target Start/End: Complemental strand, 37330692 - 37330607
Alignment:
Q  563 aaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37330692 aaatgtaattacctttgtaagtgctctttgagtccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 37330607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 563 - 655
Target Start/End: Complemental strand, 30534987 - 30534895
Alignment:
Q  563 aaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatttatttcat 655  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  30534987 aaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttggactggggtaccatcccctcaccctaaaatttctttcat 30534895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 543 - 648
Target Start/End: Original strand, 29635895 - 29636001
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacc-atcccctcaccct 641  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| || ||||||| ||    
T  29635895 tagtgcctttgaagggaggtaaatgtaattacctttgtaagtgctctttaagcccgaatgtcttccctgccttggagtggggcaccaattccctcacgct 29635994  T
Q  642 aaaattt 648  Q
    |||||||    
T  29635995 aaaattt 29636001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 563 - 648
Target Start/End: Complemental strand, 37454829 - 37454744
Alignment:
Q  563 aaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  37454829 aaatataattacctttgtaagtgctctttgagcccgaaggtcttccctaccttagattggggcaccatcccctcaccctaaaattt 37454744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 505 - 642
Target Start/End: Complemental strand, 50726140 - 50726003
Alignment:
Q  505 aggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtc 604  Q
    |||||||||||||||||||| |||||||||||| || |||||| ||| ||||| |||||||| ||||||| ||||||||| || ||||||  |||| |||    
T  50726140 aggtcttgaatccgagagaattcgggttcgagccccgttagtgtctttggaggaaggtaaatataattacttttgtaagttctttttgagttcgaaagtc 50726041  T
Q  605 ttccctgccttggactggggcaccatcccctcacccta 642  Q
    |||||| | ||||| |||||||||||||| ||||||||    
T  50726040 ttccctactttggattggggcaccatcccttcacccta 50726003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 505 - 642
Target Start/End: Original strand, 50786708 - 50786845
Alignment:
Q  505 aggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtc 604  Q
    |||||||||||||||||||| |||||||||||| || |||||| ||| ||||| |||||||| ||||||| ||||||||| || ||||||  |||| |||    
T  50786708 aggtcttgaatccgagagaattcgggttcgagccccgttagtgtctttggaggaaggtaaatataattacttttgtaagttctttttgagttcgaaagtc 50786807  T
Q  605 ttccctgccttggactggggcaccatcccctcacccta 642  Q
    |||||| | ||||| |||||||||||||| ||||||||    
T  50786808 ttccctactttggattggggcaccatcccttcacccta 50786845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 545 - 648
Target Start/End: Complemental strand, 19872586 - 19872483
Alignment:
Q  545 gtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    ||||||| ||||| |||||||  ||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  19872586 gtgcctttggaggaaggtaaaattaattacctttgtaagtactctttgaatccgaaggtcttccctgtcttggactggggcaccatcccctcatcctaaa 19872487  T
Q  645 attt 648  Q
    ||||    
T  19872486 attt 19872483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 490 - 644
Target Start/End: Original strand, 42876189 - 42876343
Alignment:
Q  490 tagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctct 589  Q
    ||||||||||| ||||| ||||| || |||| || |||| |||||||| | | ||||| |||  || |||||||||||||||||||||||||||||||||    
T  42876189 tagtggtaaaaagatagatcttgtattcgagggatctcgagttcgagcccgactagtgtctttagatggaggtaaatgtaattacctttgtaagtgctct 42876288  T
Q  590 ttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    |||| |  ||| |||||||||  |||||||| ||||||||||| |||||||||||    
T  42876289 ttgaacttgaatgtcttccctatcttggactagggcaccatcctctcaccctaaa 42876343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 576 - 648
Target Start/End: Complemental strand, 25910738 - 25910666
Alignment:
Q  576 tttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  25910738 tttgtaagtgctctttgagtccgaagatcttccctgccttggactgaggcaccatcccctcaccctaaaattt 25910666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 548 - 648
Target Start/End: Original strand, 25589253 - 25589346
Alignment:
Q  548 ccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatt 647  Q
    |||| ||| |||||||||||||| |||||| |||||||||||||||| ||||       ||||||||||||| |||||||| ||||||||||||||||||    
T  25589253 cctttggaaggaggtaaatgtaaataccttagtaagtgctctttgagtccga-------ccctgccttggacgggggcaccctcccctcaccctaaaatt 25589345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 645
Target Start/End: Complemental strand, 30203744 - 30203657
Alignment:
Q  555 agggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||||||||||||||  |||||||||| || ||||||||| ||||||| |||| || |||| ||||||||||||||||||||| ||||||    
T  30203744 agggaggtaaatgtaa--acctttgtaaatgttctttgagctcgaaggttttcc-tgtcttgaactggggcaccatcccctcactctaaaa 30203657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 488 - 579
Target Start/End: Original strand, 5548970 - 5549061
Alignment:
Q  488 tctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttg 579  Q
    ||||||||||||| |||||||||| ||||||||||| || || ||||||||  | || ||| || |||||||| ||||||||| ||||||||    
T  5548970 tctagtggtaaaaagataggtcttcaatccgagagatcttggattcgagctttactaatgcttttggagggagataaatgtaaatacctttg 5549061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 648
Target Start/End: Original strand, 773666 - 773709
Alignment:
Q  605 ttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  773666 ttcccttccttggactggggcaccatcccctcaccctagaattt 773709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 643
Target Start/End: Complemental strand, 31297574 - 31297529
Alignment:
Q  598 gaaggtcttccctgccttggactggggcaccatcccctcaccctaa 643  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  31297574 gaaggtcttccttgccttggactggggaaccatgccctcaccctaa 31297529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 648
Target Start/End: Complemental strand, 39438903 - 39438829
Alignment:
Q  573 acctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||| ||||| |  || || ||||| ||| ||||| ||||||||||||| |||||||||||||||||    
T  39438903 acctttgtaagtgttctttaaatccaaaagtctttcctaccttgaactggggcaccat-ccctcaccctaaaattt 39438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 650
Target Start/End: Complemental strand, 358989 - 358940
Alignment:
Q  601 ggtcttccctgccttggactggggcaccatcccctcaccctaaaatttat 650  Q
    ||||||| ||| ||| ||||  ||||||||||||||||||||||||||||    
T  358989 ggtcttctctgtcttagactatggcaccatcccctcaccctaaaatttat 358940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 644
Target Start/End: Original strand, 14848552 - 14848620
Alignment:
Q  576 tttgtaagtgctctttgagcccgaaggtcttccctgccttggact-ggggcaccatcccctcaccctaaa 644  Q
    ||||| ||||| ||||||||| |||||| || ||||||||||||| ||||||||| ||||| ||||||||    
T  14848552 tttgtgagtgccctttgagcctgaaggtttttcctgccttggactaggggcacca-ccccttaccctaaa 14848620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 1e-74; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 471 - 645
Target Start/End: Original strand, 51066448 - 51066622
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||    
T  51066448 taactccaaagacttggtctagtggtaaaaagacaggtcttgaatccgagagaactcgggttcgagctccgctagtgcctttggagggaggtaaatataa 51066547  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51066548 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 51066622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 471 - 645
Target Start/End: Complemental strand, 46494575 - 46494401
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  46494575 taactccaaaggtttggtctagtggtaaaatgacaggtcttgaatccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaa 46494476  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46494475 atacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactggggcaccatcccctcaccctaaaa 46494401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 471 - 648
Target Start/End: Complemental strand, 7173762 - 7173585
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||  ||  ||||||||| ||| |||||||||||| |    
T  7173762 taactccaaaggcttggtctagtggtaaaatgacaggtcttgaatccgagagaacctaggttcaagacccgctagtgcctttggaaggaggtaaatgtca 7173663  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7173662 atacctttgtaagtgctctttgagcccgaaggtcttccctgcgttggactggggcaccatcccctcaccctaaaattt 7173585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 492 - 648
Target Start/End: Original strand, 36192517 - 36192673
Alignment:
Q  492 gtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctcttt 591  Q
    ||||||||| || ||||||||||| ||||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  36192517 gtggtaaaaagacaggtcttgaattcgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaattacttttgtaaatgctcttt 36192616  T
Q  592 gagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36192617 gagcccgaaggtcttccctaccttggactggggcaccatcccctcaccctaaaattt 36192673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 496 - 648
Target Start/End: Complemental strand, 51714117 - 51713965
Alignment:
Q  496 taaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagc 595  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | |||||||||||| ||| ||||||||||||||||||||||||    
T  51714117 taaaatgacaggtcttgaatccgagagaacccgggttcgagccccactagtgcctttgaagggaggtaaatataaatacctttgtaagtgctctttgagc 51714018  T
Q  596 ccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  51714017 ccgaaggtcttccctgctttgaactggggcaccatcccctcaccctaaaattt 51713965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 471 - 648
Target Start/End: Complemental strand, 39863955 - 39863778
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||  | ||  ||||||||| ||||||| ||||||||||    
T  39863955 taactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcggaccccgctagtgcctttggagggaagtaaatgtaa 39863856  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||| | ||| ||||||||||||||||||||    
T  39863855 ttacctttgtaagtgctctttgaacccgaaggtcttctctaccttggactgagacactatcccctcaccctaaaattt 39863778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 476 - 644
Target Start/End: Original strand, 32139124 - 32139292
Alignment:
Q  476 caaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacc 575  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||  |||||||| | ||  ||||| ||| |||||||||||||||||||||||    
T  32139124 caaaaggcttggtctagtggtaaaaggacaggtcatgaatccgagagaacctgggttcgaaccccgctagtgtctttggagggaggtaaatgtaattacc 32139223  T
Q  576 tttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  32139224 tttgtaagtgttctttgagcctgaaggtcttctctgccttggactggggcaccatcccttcaccctaaa 32139292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 496 - 648
Target Start/End: Complemental strand, 30970536 - 30970384
Alignment:
Q  496 taaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagc 595  Q
    |||||||| ||||||||||||||||||||  |||||||||||  || ||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  30970536 taaaatgacaggtcttgaatccgagagaatccgggttcgagcctcactagtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttgagc 30970437  T
Q  596 ccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  30970436 tcgaaggtcttccctaccttagactggggcaccatcccctcaccctaaaattt 30970384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 471 - 618
Target Start/End: Original strand, 8740403 - 8740550
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||||||||| | ||||||||||| ||  ||||||||| ||||||||||||||||||    
T  8740403 taactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagatcccgggttcgagccccgctagtgcctttggagggaggtaaatgtaa 8740502  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttgga 618  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||    
T  8740503 atacctttgtaagtgctctttgagcccgaaggtcttccatgccttgga 8740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 470 - 648
Target Start/End: Original strand, 50905702 - 50905880
Alignment:
Q  470 ttaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgta 569  Q
    ||||||| ||||| || |||||||||||||| || ||||||||||||||||||||   |||||||||| ||  ||||||||| |||| ||||||||||||    
T  50905702 ttaactccaaaggtttagtctagtggtaaaaagacaggtcttgaatccgagagaatctgggttcgagccccgctagtgcctttggagagaggtaaatgta 50905801  T
Q  570 attacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||| ||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||  ||||||||||||||    
T  50905802 attatctttgtaggtgctctttgagtccgaaggtcttccatgccttgaactggggcaccatcctttcaccctaaaattt 50905880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 480 - 645
Target Start/End: Complemental strand, 2294878 - 2294719
Alignment:
Q  480 aggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttg 579  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| | |  ||||||||| ||||| ||||||||||||||||         
T  2294878 aggcttggtctagtggtaaaaagacaggtcttgaattcgagagaactcgggttcgagtttcgctagtgcctttggaggaaggtaaatgtaattac----- 2294784  T
Q  580 taagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
     ||||| || ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||    
T  2294783 -aagtgttcgttgagcccgaaagtcttcactgccttagactggggcaccatcccctcaccctaaaa 2294719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 545 - 648
Target Start/End: Original strand, 29576444 - 29576547
Alignment:
Q  545 gtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    ||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  29576444 gtgcctttggagggaggtaaatgtaaataactttgtaagtgctctttgagcccgaaggtcttccctgccttggattggggcaccaccccctcaccctaaa 29576543  T
Q  645 attt 648  Q
    ||||    
T  29576544 attt 29576547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 544 - 648
Target Start/End: Original strand, 55231715 - 55231819
Alignment:
Q  544 agtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaa 643  Q
    |||||||| | |||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  55231715 agtgcctttgaagggaggtaaatgtaaatacttttgtaagtgctctttgagcctgaatgtcttccctgccttggactggggcaccatcccctcaccctaa 55231814  T
Q  644 aattt 648  Q
    |||||    
T  55231815 aattt 55231819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 572 - 648
Target Start/End: Complemental strand, 22304167 - 22304091
Alignment:
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  22304167 tacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactggggcaccatcctctcaccctaaaattt 22304091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 554 - 648
Target Start/End: Original strand, 676766 - 676860
Alignment:
Q  554 gagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||| ||||||||    
T  676766 gagggaggtaagtgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactgtaacaccatccccttaccttaaaattt 676860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 531 - 648
Target Start/End: Original strand, 2570216 - 2570333
Alignment:
Q  531 ttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccat 630  Q
    ||||||||||  | ||||||| |||||||||||||| ||| || | || ||| || |||||||| |||||| ||||||||||||||||||||||||||||    
T  2570216 ttcgagctccgctggtgcctttggagggaggtaaatataaatatcattataaatgttctttgagtccgaagatcttccctgccttggactggggcaccat 2570315  T
Q  631 cccctcaccctaaaattt 648  Q
    ||||||||||||||||||    
T  2570316 cccctcaccctaaaattt 2570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 510 - 648
Target Start/End: Complemental strand, 47627133 - 47626993
Alignment:
Q  510 ttgaatccgagagaactcgggttcgag--ctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttc 607  Q
    |||||||||||||||| ||| ||||||  | ||| ||||||||| | |||||||||||||||| ||||| | ||| | |||||||| | |||||||||||    
T  47627133 ttgaatccgagagaacccggattcgagagccccactagtgcctttgaagggaggtaaatgtaaatacctctataaatactctttgaactcgaaggtcttc 47627034  T
Q  608 cctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||  ||||||| ||||||||||||||||    
T  47627033 cctgccttggactggaacaccatctcctcaccctaaaattt 47626993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 543 - 645
Target Start/End: Original strand, 41523424 - 41523526
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    ||||| ||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||  |||||| |||| ||||||||| ||| ||||    
T  41523424 tagtgtctttggagggaggtaaatgtaaatacctttataagtgctctttgagctcgaaggtcttccctatcttggattgggacaccatcccttcatccta 41523523  T
Q  643 aaa 645  Q
    |||    
T  41523524 aaa 41523526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 554 - 646
Target Start/End: Complemental strand, 51279127 - 51279035
Alignment:
Q  554 gagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaat 646  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||  ||||||| |  ||||||||||||||||||||||||    
T  51279127 gagggaggtcaatgtaaatacttttgtaagtgctctttgagcccaaaggtcttcccaaccttggattaaggcaccatcccctcaccctaaaat 51279035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 553 - 648
Target Start/End: Complemental strand, 4080647 - 4080552
Alignment:
Q  553 ggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||| ||||||| ||||||||||| | ||| |||||| ||| |||||| ||| ||||||||||||| || ||||||||    
T  4080647 ggagggaggtaaatgtaattacatttgtaaatgctctttgagtctgaatgtcttctctgtcttggattggagcaccatcccctcgccttaaaattt 4080552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 619
Target Start/End: Original strand, 22423371 - 22423479
Alignment:
Q  511 tgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccct 610  Q
    |||||| |||||| ||||| ||||||| |  ||||| |||| |||||||||||||||||| ||| |||||||||| |||||| |  ||||||||||||||    
T  22423371 tgaatctgagagatctcggattcgagcccggttagtacctttggagggaggtaaatgtaaatacttttgtaagtgttctttgtgttcgaaggtcttccct 22423470  T
Q  611 gccttggac 619  Q
    || ||||||    
T  22423471 gctttggac 22423479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 526 - 650
Target Start/End: Complemental strand, 50399764 - 50399640
Alignment:
Q  526 tcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggc 625  Q
    |||||||||||| ||  ||||||  | ||||| |||||||||||| |||||||||||||| ||||||||||  || |||||| || |||||||   ||||    
T  50399764 tcgggttcgagccccgctagtgctcttggaggaaggtaaatgtaaatacctttgtaagtgttctttgagcctaaatgtcttctctaccttggataagggc 50399665  T
Q  626 accatcccctcaccctaaaatttat 650  Q
    | ||||| ||||||||||| |||||    
T  50399664 atcatccgctcaccctaaattttat 50399640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 583 - 645
Target Start/End: Complemental strand, 23084530 - 23084468
Alignment:
Q  583 gtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||||||||||| ||||||||||||||| ||||| ||||||| |||||| |||||||||||||    
T  23084530 gtgctctttgagtccgaaggtcttccctaccttgaactggggtaccatctcctcaccctaaaa 23084468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 580 - 644
Target Start/End: Complemental strand, 37990663 - 37990599
Alignment:
Q  580 taagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    ||||| ||||||||||| |||| |||||||| ||||||||||||||||||| |||||| ||||||    
T  37990663 taagtactctttgagcctgaagatcttccctaccttggactggggcaccattccctcatcctaaa 37990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 602 - 645
Target Start/End: Original strand, 51066240 - 51066283
Alignment:
Q  602 gtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  51066240 gtcttccctgccttgaactggggcaccatcccctcaccctaaaa 51066283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 644
Target Start/End: Original strand, 40012550 - 40012640
Alignment:
Q  553 ggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    |||||||||||||||||| | ||||||| ||||||| ||||| |  |||||||||||| | ||||||| || |||| ||| ||||| |||||    
T  40012550 ggagggaggtaaatgtaaatccctttgtgagtgctc-ttgagtcataaggtcttccctacgttggactaggacaccgtcctctcacactaaa 40012640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 640
Target Start/End: Complemental strand, 28202643 - 28202598
Alignment:
Q  595 cccgaaggtcttccctgccttggactggggcaccatcccctcaccc 640  Q
    |||||||||||| |||| ||| |||||| |||||||||||||||||    
T  28202643 cccgaaggtctttcctgtcttagactggagcaccatcccctcaccc 28202598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 642
Target Start/End: Original strand, 28202701 - 28202782
Alignment:
Q  561 gtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    |||||||||| | | |||||||||| ||| |||||| |||| |||||| ||||||  | ||  |||||||||||||||||||    
T  28202701 gtaaatgtaaatgcatttgtaagtgttctatgagcctgaagatcttccttgcctttaattgatgcaccatcccctcacccta 28202782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 4e-71; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 17064279 - 17064455
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |  ||||||||| ||||||||||||||||||     
T  17064279 aactccaaaggcttggtctagtggtaaaatgacaggtcttgaatccgagagaacccgggttcgagcctcgctagtgcctttggagggaggtaaatgtaaa 17064378  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17064379 tacctttgtaagtgctctttaagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 17064455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 472 - 645
Target Start/End: Complemental strand, 20983179 - 20983006
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||| ||||| || ||||||||||||| ||||||  ||||||||||| ||  |||||||||||||| |||||||||| |||    
T  20983179 aactccaaaggcttggtctagtgataaaaagacaggtcttgaatccaagagaatccgggttcgagccccgctagtgccttcggagagaggtaaatgcaat 20983080  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20983079 tacatttgtaagtgctctttgagcccgaaagtcttccctgccttggactggggcaccatcccctcaccctaaaa 20983006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 505 - 648
Target Start/End: Original strand, 37976535 - 37976682
Alignment:
Q  505 aggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaat----gtaattacctttgtaagtgctctttgagcccgaa 600  Q
    |||||||||||||||||||||  |||||||||| ||  |||||| || | ||||||||||||    |||| |||||||||||||||| ||||||||||||    
T  37976535 aggtcttgaatccgagagaacctgggttcgagccccgctagtgcatttgaagggaggtaaattaatgtaaatacctttgtaagtgctatttgagcccgaa 37976634  T
Q  601 ggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||| || ||||||||| |||||||||||||||||||||||||||||||    
T  37976635 ggtttttcctgccttgaactggggcaccatcccctcaccctaaaattt 37976682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 483 - 648
Target Start/End: Original strand, 41910793 - 41910956
Alignment:
Q  483 cttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaa 582  Q
    |||| ||||||||||||| || |||||||||||| ||||||| | ||||| ||| |   |||||  ||| ||||| ||||||||||||||| ||||||||    
T  41910793 cttgctctagtggtaaaaagacaggtcttgaatctgagagaatttgggtttgagtttg-ttagtatctttggagg-aggtaaatgtaattaactttgtaa 41910890  T
Q  583 gtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||| |||||||||||||| |||||| |||||||| |||||||||||||||||||||| ||||||||    
T  41910891 gtgttctttgagcccgaatgtcttctctgccttgaactggggcaccatcccctcaccttaaaattt 41910956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 553 - 643
Target Start/End: Original strand, 31673867 - 31673956
Alignment:
Q  553 ggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaa 643  Q
    |||| |||| |||||||| | |||||| |||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  31673867 ggagagaggaaaatgtaaatccctttg-aagtgccctttgagccctaaggtcctccctgccttggactggggcaccaacccctcaccctaa 31673956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 472 - 568
Target Start/End: Complemental strand, 35237199 - 35237103
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgt 568  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||   || ||||||| ||  ||||| ||| | ||||||||||||||    
T  35237199 aactctaaaggcttggtctagtggtaaaatgatacgtcttgaattcgagagaatctggattcgagccccgctagtgtctttgaagggaggtaaatgt 35237103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 713 - 765
Target Start/End: Original strand, 33001304 - 33001356
Alignment:
Q  713 atgggaaatactatttaacgcgagaaaataatcccgaccttgaactctactct 765  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  33001304 atgggaaatactatttaacgcgagaaaataatcccgaacttgtattctactct 33001356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 533 - 648
Target Start/End: Complemental strand, 5009531 - 5009417
Alignment:
Q  533 cgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcc 632  Q
    ||||| || |||||| ||| |||| ||| ||||||||| ||  ||||||| || |||||||  ||||||||||||| ||||||| ||||| ||| |||||    
T  5009531 cgagccccgttagtgtctttggagagagataaatgtaaatatttttgtaaatgttctttgaatccgaaggtcttccatgccttgaactggtgcatcatcc 5009432  T
Q  633 cctcaccctaaaattt 648  Q
    || |||||||||||||    
T  5009431 cc-caccctaaaattt 5009417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 553 - 644
Target Start/End: Complemental strand, 39162947 - 39162859
Alignment:
Q  553 ggagggaggtaaatgtaattacctt-tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    ||||| |||||||||||| |||||| ||||| |||||||||||||    |||||||  ||||||||||||||||||| |||| ||||||||||    
T  39162947 ggaggaaggtaaatgtaaataccttgtgtaaatgctctttgagcc----ggtcttctgtgccttggactggggcaccgtcccatcaccctaaa 39162859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 605 - 648
Target Start/End: Complemental strand, 35237102 - 35237059
Alignment:
Q  605 ttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  35237102 ttccctgccttggactgaggcaccatcccctcactctaaaattt 35237059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 647
Target Start/End: Complemental strand, 38255614 - 38255559
Alignment:
Q  592 gagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatt 647  Q
    |||||| ||||||||||||   |||||||||||||||||| ||||||| |||||||    
T  38255614 gagcccaaaggtcttccctattttggactggggcaccatctcctcaccttaaaatt 38255559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 765
Target Start/End: Original strand, 33014624 - 33014677
Alignment:
Q  711 ttatgggaaatactatttaacgcgagaaaataatcccgaccttgaactctactct 765  Q
    |||||||||||||||||||| ||||| |||||||||||| |||| | ||||||||    
T  33014624 ttatgggaaatactatttaatgcgag-aaataatcccgaacttgtattctactct 33014677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 2e-70; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 469 - 648
Target Start/End: Original strand, 44650346 - 44650525
Alignment:
Q  469 attaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgt 568  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||  |||||||||| |||||||||| ||||||||||||||||    
T  44650346 attaactccaaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgatttcgagctccgttagtgcctttggagggaggtaaatgt 44650445  T
Q  569 aattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  44650446 aattacctttgtaagtgctctttgagtccgaagatcttccctgccttggaccggggcaccatcccctcaccctaaaattt 44650525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 17136343 - 17136519
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||| |||||||| |||| ||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||||||||     
T  17136343 aactccaaaggcttggtctagtgataaaatgacaggttttgaatctgagagaacccgggttcgagccccgttagtgcctttggagggaggtaaatgtaaa 17136442  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17136443 tacctttgtaagtgctctttgagcccgaaggtcttccccgccttggactggggcaccatcccctcaccctaaaattt 17136519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 478 - 648
Target Start/End: Complemental strand, 2754221 - 2754051
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||  ||| || |||||| |||||||||||||||||| ||||||    
T  2754221 aaaggcttggtttagtggtaaaatgacaggtcttgaatccgagagaacccggattcgagtcccactaatgcctttggagggaggtaaatgtaaatacctt 2754122  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754121 tgtaagtgctctttgagctcgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 2754051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 471 - 648
Target Start/End: Original strand, 40155995 - 40156172
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||| ||||||||||||||||| || ||||||||||||||||||||  ||||||||||| ||  ||||||||| ||||||||||||||||||    
T  40155995 taactccaaaggtttggtctagtggtaaaaagacaggtcttgaatccgagagaatccgggttcgagccccgctagtgcctttggagggaggtaaatgtaa 40156094  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  40156095 ttacctttgtaagtgctctttgagcccgaaggtcttccctaccttgaactggggcaccatcccctcaccataaaattt 40156172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 467 - 648
Target Start/End: Complemental strand, 10745413 - 10745232
Alignment:
Q  467 taattaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaat 566  Q
    |||||||||| ||||||||||| ||||||||||| || ||||||||||| ||||||||| ||||| ||||| ||  |||||||||  |||||||||||||    
T  10745413 taattaactccaaaggcttggtttagtggtaaaaagacaggtcttgaattcgagagaacccgggtccgagccccgctagtgcctttagagggaggtaaat 10745314  T
Q  567 gtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10745313 gtaattatctttgtaagtgctctttgaacccgaaggtattccctgccttggactggggcaccatcccctcaccctaaaattt 10745232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 5039376 - 5039552
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||  |||||| ||  |||||||||||| |||||    
T  5039376 aactccaaaggcttggtatagtggtaaaaagacaggtcttgaatccgagagaactcgggttcgagctccgctagtgcttttagagggaggtaaacgtaat 5039475  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||    
T  5039476 tacctttgtaagtgctctttgagcccgaagatcttccctaccttggactagggcaccatcccctcactctaaaattt 5039552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 472 - 639
Target Start/End: Complemental strand, 6672969 - 6672802
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||| ||| ||  ||||||||| |||||||||||||||||||    
T  6672969 aactccaaaggtttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcaagccccgctagtgcctttggagggaggtaaatgtaat 6672870  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacc 639  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6672869 tacctttgtacgcgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacc 6672802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 471 - 648
Target Start/End: Complemental strand, 2357252 - 2357076
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||| |||| ||||||||||||||||||    
T  2357252 taactccaaaggcttggtctagtggtaaaatgacaggtcttgaatccgagagaacccgggttcgagttccactagtacctttggagggaggtaaatgtaa 2357153  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     |||| |||||| |||| ||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2357152 ataccattgtaaatgct-tttgagttcgaaggtcttccatgccttggactggggcaccatcccctcaccctaaaattt 2357076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 472 - 648
Target Start/End: Complemental strand, 25987838 - 25987661
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||| |  | |||||||| || ||||||||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||    
T  25987838 aactccaaaggcttgatacaatggtaaaaagacaggtcttgaatccgagagaactcgggttcgagccccgctagtgcctttggagggaggtaaatgtaat 25987739  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtc-ttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  25987738 tacctttgtaagtgctctttgagtccgaaggtctttccctgccttggtctggggcaccatcccctcaccctaaaattt 25987661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 488 - 648
Target Start/End: Original strand, 21637869 - 21638029
Alignment:
Q  488 tctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgct 587  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| |||| ||  ||||||||| |||||||||||||||||| ||||||||||||||||    
T  21637869 tctagtggtaaaatgataggtcttgaattcgagagaacccgggtttgagccccgctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgct 21637968  T
Q  588 ctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  21637969 ctttgagcccaaaggtcttctctgccttggactagggcaccatcccctcaccctaaaattt 21638029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 469 - 648
Target Start/End: Complemental strand, 36380311 - 36380132
Alignment:
Q  469 attaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgt 568  Q
    |||||||  ||||||||||||||||||||||  || ||||||||||| ||||| |||||||||| || | ||  ||||||||| ||||||||||||||||    
T  36380311 attaacttcaaaggcttggtctagtggtaaacagacaggtcttgaattcgagaaaactcgggtttgaaccccgctagtgcctttggagggaggtaaatgt 36380212  T
Q  569 aattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  36380211 aattccctttgtaagtgctctttgagcccgaaggtcttccctaccttggactgaggcaccatcccctcaccctaaaattt 36380132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 509 - 648
Target Start/End: Complemental strand, 45137109 - 45136970
Alignment:
Q  509 cttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttcc 608  Q
    ||||||||||||||||| ||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45137109 cttgaatccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttcc 45137010  T
Q  609 ctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  45137009 ctgccttggactggggcaccatcccttcaccctaaaattt 45136970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 505 - 648
Target Start/End: Complemental strand, 36836472 - 36836329
Alignment:
Q  505 aggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtc 604  Q
    ||||||||||||||||||||| || |||||||  ||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  36836472 aggtcttgaatccgagagaacccgagttcgagtcccgctggtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatc 36836373  T
Q  605 ttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  36836372 ttccctgccttggactggggcaccatcccctcaccttaaaattt 36836329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 470 - 648
Target Start/End: Complemental strand, 7860324 - 7860146
Alignment:
Q  470 ttaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgta 569  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||| ||  ||||||||| |||||||||||||||||    
T  7860324 ttaactccaaaggcttggtctagtggtaaaatgacaggtcttgaatccgagagaacctgggtttgagccccgctagtgcctttggagggaggtaaatgta 7860225  T
Q  570 attacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
      ||| |||||||||| ||||||||||||||| | ||| ||||||||||||| |||| ||||||||| |||||||||||    
T  7860224 catacatttgtaagtgttctttgagcccgaagattttctctgccttggactgaggcatcatcccctctccctaaaattt 7860146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 472 - 646
Target Start/End: Complemental strand, 30372856 - 30372682
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||| |  |||||||||||||  ||||||||| ||| ||||||||||||||     
T  30372856 aactccaaaggtttggtctagtggtaaaaagataggtcttgaattcgagagatcctgggttcgagctccgctagtgcctttggaaggaggtaaatgtaaa 30372757  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaat 646  Q
    || |||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  30372756 tatctttgttagtgctctttgagcccgaaggtcttccatgccttgaactggggtaccataccctcaccctaaaat 30372682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 26690110 - 26690286
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||||||||||||||||||||| || |||| || ||| ||||||||   |||||||||  ||  |||||| || |||||||||||||||||||    
T  26690110 aactccaaaggcttggtctagtggtaaaaagacaggttttaaattcgagagaatctgggttcgagtcccgctagtgcttttggagggaggtaaatgtaat 26690209  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||| |||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26690210 tacctttgtaagtgatctttgtgttcgaaggtcttccctgccttggactgaggcaccatcccctcaccctaaaattt 26690286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 543 - 648
Target Start/End: Complemental strand, 558544 - 558439
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||    
T  558544 tagtgcctttggagggaggtaaatgtaattacttttgtaagtgctctttgagctagaaggtcttcccttccttggaatggggcaccatcccctcacccta 558445  T
Q  643 aaattt 648  Q
    ||||||    
T  558444 aaattt 558439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 508 - 648
Target Start/End: Original strand, 33066582 - 33066722
Alignment:
Q  508 tcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttc 607  Q
    ||||||||  |||||||  |||||||||||| || ||||| ||| |||| ||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  33066582 tcttgaatttgagagaatccgggttcgagcttcactagtgtctttggagagaggtaaatgtaaatatctttgtaagtgctctttgagcctgaaggtcttc 33066681  T
Q  608 cctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     || |||||||||||||||||||||||||| ||||||||||    
T  33066682 tctaccttggactggggcaccatcccctcatcctaaaattt 33066722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 481 - 648
Target Start/End: Original strand, 3200847 - 3201013
Alignment:
Q  481 ggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgt 580  Q
    |||||||||| ||||||||| || || |||||||||  |||||||  || |||||||  |  ||||||||| ||||||||||||||||||||||||||||    
T  3200847 ggcttggtct-gtggtaaaaagacagatcttgaatctaagagaacctggattcgagcctcgctagtgcctttggagggaggtaaatgtaattacctttgt 3200945  T
Q  581 aagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||| |||||||||| |||| ||||| ||||||| ||||||||||||||| |||| |||||||||||    
T  3200946 aagtgttctttgagcctgaagatcttctctgccttagactggggcaccatctcctcgccctaaaattt 3201013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 472 - 649
Target Start/End: Complemental strand, 13047324 - 13047155
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| |||||||||||||   ||||||| || ||||||||||| ||||||||  ||||||||||| ||    ||  ||| |||||||||||||| ||||    
T  13047324 aactctaaaggcttggtct---ggtaaaaagacaggtcttgaattcgagagaatccgggttcgagccccgcatgt--ctttggagggaggtaaatataat 13047230  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattta 649  Q
    ||||||   ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  13047229 tacctt---aagtgctctttgagcccaaagatcttccctgccttggactggagcaccatcccctcaccctaaaattta 13047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 471 - 648
Target Start/End: Original strand, 21487105 - 21487281
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| ||||| || ||| ||||||||||||| ||||||||||||| |||  ||    ||| |||||||| | ||  ||| ||||||||||||||||||    
T  21487105 taactccaaaggtttagtcaagtggtaaaatgacaggtcttgaatccaaga--acctaagtttgagctccactggtatctttggagggaggtaaatgtaa 21487202  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccat-cccctcaccctaaaattt 648  Q
     ||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  21487203 atatttttgtaagtgctctttgagcccgaaagtcttccctgccttagactggggcaccatccccctcatcctaaaattt 21487281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 473 - 645
Target Start/End: Complemental strand, 4553734 - 4553561
Alignment:
Q  473 actcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagg-gaggtaaatgtaat 571  Q
    |||||||| | |||||||| |||||||| || | ||||||||| |||||||  || |||||||| ||   |||||  || ||||| ||||||||| |||     
T  4553734 actcaaaatgattggtctaatggtaaaaagacatgtcttgaattcgagagatttcaggttcgagttcagctagtgtttttggaggagaggtaaatataaa 4553635  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||| ||||||||| ||||||||| ||| |||||||| ||| ||| |||||||||||||||||||||| ||||||    
T  4553634 tacatttgtaagtactctttgagtccggaggtcttctctgtcttagactggggcaccatcccctcactctaaaa 4553561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 599 - 648
Target Start/End: Complemental strand, 2098875 - 2098826
Alignment:
Q  599 aaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2098875 aaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 2098826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 472 - 549
Target Start/End: Complemental strand, 2099016 - 2098939
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgcc 549  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||| ||||  |||||||    
T  2099016 aactccaaaggcttggtctattggtaaaatgataggtcttgaattcgagagaacccaggttcgaactccgctagtgcc 2098939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 6e-70; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 478 - 648
Target Start/End: Complemental strand, 35163920 - 35163750
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctt 577  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||  |||||||||| ||| || |||||| |||||||||||||||||| ||||||    
T  35163920 aaaggcttggtctagtggtaaaaagacaggtcttgaatccgagagaaccagggttcgagccccactaatgcctttggagggaggtaaatgtaaatacctt 35163821  T
Q  578 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35163820 tgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 35163750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 471 - 648
Target Start/End: Complemental strand, 2711911 - 2711740
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||  || ||||||| ||| |||||| || ||||||||||||||||||    
T  2711911 taactcgaaaggcttggtctagtggtaaaatgacaggtcttgaatccgatagaacctggattcgagccccactagtgcttttggagggaggtaaatgtaa 2711812  T
Q  571 ttacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||      ||||||||||||||||||||||||    
T  2711811 atacctttgtaagtgctctttgagctcgaaggtcttccctgccttgga------caccatcccctcaccctaaaattt 2711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 475 - 648
Target Start/End: Complemental strand, 19687000 - 19686827
Alignment:
Q  475 tcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattac 574  Q
    |||||||| |||||||||||||||||  | |||||||||||| ||||||||  |||||||||| ||  ||||||||| | ||||||||||||||||||||    
T  19687000 tcaaaaggtttggtctagtggtaaaaaaacaggtcttgaatctgagagaacctgggttcgagcccctctagtgcctttgtagggaggtaaatgtaattac 19686901  T
Q  575 ctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||| |||| ||| |||| |||||||||| |||||||||||||||||||||    
T  19686900 ctttgtaagtgctctttgagcccgaagatctttcctcccttagactggggcatcatcccctcaccctaaaattt 19686827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 543 - 648
Target Start/End: Original strand, 20685352 - 20685457
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20685352 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccttcacccta 20685451  T
Q  643 aaattt 648  Q
    ||||||    
T  20685452 aaattt 20685457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 543 - 648
Target Start/End: Original strand, 17948707 - 17948812
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    ||||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||    
T  17948707 tagtgtctttggagagaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactgggacaccatcccctcacctta 17948806  T
Q  643 aaattt 648  Q
    ||||||    
T  17948807 aaattt 17948812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 542 - 645
Target Start/End: Original strand, 15070151 - 15070254
Alignment:
Q  542 ttagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccct 641  Q
    |||||||||| |||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  15070151 ttagtgcctttggagggaggtaaatataattacatttgtaagtgttcattgagcccgaaggtcttccctgccttagactggggcaccatcccctcaccca 15070250  T
Q  642 aaaa 645  Q
    ||||    
T  15070251 aaaa 15070254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 470 - 648
Target Start/End: Complemental strand, 14505700 - 14505525
Alignment:
Q  470 ttaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgta 569  Q
    ||||||| ||||||||||||||| |||||||  | | || |||||||||||||| | ||  ||||||| ||  |||||| || |||||||||||||||||    
T  14505700 ttaactccaaaggcttggtctagaggtaaaaaaacaagt-ttgaatccgagagatcccgaattcgagccccgctagtgcttttggagggaggtaaatgta 14505602  T
Q  570 attacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    || |||||||||| |  |||||| || ||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  14505601 at-acctttgtaaatattctttgggcgcgaagatcttccgtgccttggactggggcaccatcccctca-cctaaaattt 14505525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 478 - 570
Target Start/End: Original strand, 14496314 - 14496406
Alignment:
Q  478 aaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    ||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  14496314 aaaggtttggtctagtggtaaaaagaaaggtcttgaatccgagagaacccgggttcgagccccactagtgcctttggagggaggtaaatgtaa 14496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 543 - 619
Target Start/End: Original strand, 24336642 - 24336718
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggac 619  Q
    |||| |||| |||||||||||||||||| ||| |||||||||| | |||||||| |||| |||||||||||||||||    
T  24336642 tagtccctttggagggaggtaaatgtaaatacttttgtaagtgttttttgagcctgaagatcttccctgccttggac 24336718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 9e-69; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 19723267 - 19723443
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||  ||||||||| |||||||||||||||||||    
T  19723267 aactccaaaggtttggtctagtggtaaaaagacaggtcttgaatccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgtaat 19723366  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19723367 tacctttgtaagtgctctttgagcccaaagatcttccctgccttggactggggcaccatcccctcaccctaaaattt 19723443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 468 - 648
Target Start/End: Original strand, 11403953 - 11404133
Alignment:
Q  468 aattaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatg 567  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||  |  ||||| ||| |||||||||||||||    
T  11403953 aattaactccaaagacttggtctagtggtaaaatgacaggtcttgaattcgagagaacctgggttcgagcctcgctagtgtctttggagggaggtaaatg 11404052  T
Q  568 taattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11404053 taaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 11404133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 469 - 648
Target Start/End: Original strand, 4840093 - 4840272
Alignment:
Q  469 attaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgt 568  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||  ||||||||| ||||||||||||||||    
T  4840093 attaactccaaaggcttggtctagtggtaaaaagataggttttgaatccgagagaacccgggttcgagccccgctagtgcctttggagggaggtaaatgt 4840192  T
Q  569 aattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
     |||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4840193 cattaccattgtaagtgctctttgagtccaaaggtcttccctgccttggactagggcaccatcccctcaccctaaaattt 4840272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 22711465 - 22711641
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||||| |||  | | || |||||| ||||||||||||||||||     
T  22711465 aactccaaaggtttggtctagtggtaaaaagacaggtcttgaatccgagagaactcgggtttgagtccaactaatgcctttggagggaggtaaatgtaaa 22711564  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  22711565 tacctttgtaagtgctctttgagcccgaaggtcttccttgccttggactggggcaccatcccctcatcctaaaattt 22711641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 472 - 648
Target Start/End: Complemental strand, 32296815 - 32296639
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| ||||| ||||||||||||||||| || |||||||||||  |||||||| ||||||| ||| |   ||||||||| | |||||||||||||||||    
T  32296815 aactccaaaggtttggtctagtggtaaaaagacaggtcttgaatttgagagaacccgggttcaagccctgctagtgcctttgaagggaggtaaatgtaat 32296716  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32296715 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggattggggcaccatcccctcaccctaaaattt 32296639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 473 - 645
Target Start/End: Complemental strand, 28739736 - 28739564
Alignment:
Q  473 actcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaatt 572  Q
    |||| |||||||||||||||||||||||||| ||||||||||| | |||||||  |||||| ||| ||| ||||||||| ||||| | |||||||||| |    
T  28739736 actccaaaggcttggtctagtggtaaaatgacaggtcttgaattctagagaacctgggttcaagccccactagtgcctttggaggaaagtaaatgtaaat 28739637  T
Q  573 acctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  28739636 acctttgtaagtgctctttgagcccgaaggtcttccctaccttggactgcagcaccatcccctcaccctaaaa 28739564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 505 - 648
Target Start/End: Original strand, 29767177 - 29767318
Alignment:
Q  505 aggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtc 604  Q
    |||||||||||| |||||||| |||| |||||| ||  ||||||||| | ||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  29767177 aggtcttgaatctgagagaacccggggtcgagccccgctagtgcctttgaagggaggtaaat--aattacctttgtaagtgttctttgagcccgaaggtc 29767274  T
Q  605 ttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  29767275 ttccctgccttggactggggcaccatcccctcaccctaaaattt 29767318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 543 - 645
Target Start/End: Original strand, 17095577 - 17095679
Alignment:
Q  543 tagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 642  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17095577 tagtgcctttggagggaggtaaatgtaattacctttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 17095676  T
Q  643 aaa 645  Q
    |||    
T  17095677 aaa 17095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 492 - 648
Target Start/End: Original strand, 41553261 - 41553417
Alignment:
Q  492 gtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctcttt 591  Q
    |||||||||||||||||||||||| ||||||||| || |||||||  ||| || || ||| ||||| | |||||||||| |||||||||||||| |||||    
T  41553261 gtggtaaaatgataggtcttgaattcgagagaacccgagttcgagtcccactaatgtctttggaggaacgtaaatgtaaatacctttgtaagtgttcttt 41553360  T
Q  592 gagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  41553361 gagctcgaaggtcttccctgccttagactggagcaccatcccctcaccctaaaattt 41553417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 470 - 648
Target Start/End: Original strand, 11610234 - 11610412
Alignment:
Q  470 ttaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgta 569  Q
    ||||||| ||||| ||||||||||||||||| || ||||||||||||||||||| ||||| |||||||  |  ||||||||| ||||  |||||||| ||    
T  11610234 ttaactccaaaggtttggtctagtggtaaaaagacaggtcttgaatccgagagatctcggattcgagcctcgctagtgcctttggagaaaggtaaatata 11610333  T
Q  570 attacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    | || ||||||||||||| ||| |||||||||||||| | |  ||||||||||||||||||||||||||||||||||||    
T  11610334 aatatctttgtaagtgctgtttaagcccgaaggtcttacttatcttggactggggcaccatcccctcaccctaaaattt 11610412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 472 - 615
Target Start/End: Complemental strand, 24475172 - 24475029
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| |||||||||||||||| |||| |||| ||||||||||||||| |||| |||  ||||||||||  ||||||||| ||||||||||||||||||     
T  24475172 aactccaaaggcttggtctagtagtaagatgacaggtcttgaatccgatagaattcgaattcgagctccgctagtgcctttggagggaggtaaatgtaaa 24475073  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgcctt 615  Q
    |||||||||||||| |||||||||||||||||||| ||||||||    
T  24475072 tacctttgtaagtgttctttgagcccgaaggtctttcctgcctt 24475029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 472 - 648
Target Start/End: Original strand, 30682795 - 30682970
Alignment:
Q  472 aactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaat 571  Q
    ||||| |||||||||||||||||||| ||||  || |||||||| | ||||| | || |||||||| ||| | ||||||| |||| ||| |||||||||     
T  30682795 aactccaaaggcttggtctagtggtacaatggcagttcttgaattcaagagagcccgtgttcgagccccactggtgcctttggagagagataaatgtaaa 30682894  T
Q  572 tacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||| |||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  30682895 tacttttgtaagtgttctttgagcccgaagatcttccctgccttggact-gggcaccatcccctcaccttaaaattt 30682970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 553 - 648
Target Start/End: Original strand, 36261683 - 36261778
Alignment:
Q  553 ggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  36261683 ggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttgaactggggcaccatcccctcaccttaaaattt 36261778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 471 - 592
Target Start/End: Complemental strand, 27881165 - 27881044
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||  ||||||||| | ||||||||||||||||    
T  27881165 taactccaaaggcttggtctagtggtaaaatgacaggtcttgaatctgagagaacccgggttcgagccccgctagtgcctttgaagggaggtaaatgtaa 27881066  T
Q  571 ttacctttgtaagtgctctttg 592  Q
     |||||||||||||||||||||    
T  27881065 atacctttgtaagtgctctttg 27881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 471 - 592
Target Start/End: Complemental strand, 28021346 - 28021225
Alignment:
Q  471 taactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaa 570  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||  ||||||||| | ||||||||||||||||    
T  28021346 taactccaaaggcttggtctagtggtaaaatgacaggtcttgaatctgagagaacccgggttcgagccccgctagtgcctttgaagggaggtaaatgtaa 28021247  T
Q  571 ttacctttgtaagtgctctttg 592  Q
     |||||||||||||||||||||    
T  28021246 atacctttgtaagtgctctttg 28021225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 545 - 628
Target Start/End: Complemental strand, 21355087 - 21355004
Alignment:
Q  545 gtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcacc 628  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21355087 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaaggtcttccctgccttggactggggcacc 21355004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 562 - 645
Target Start/End: Complemental strand, 11909509 - 11909426
Alignment:
Q  562 taaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 645  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11909509 taaatgtaaatacctttctaagtgctctttgagctcgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 11909426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 553 - 644
Target Start/End: Original strand, 43288109 - 43288200
Alignment:
Q  553 ggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    |||||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43288109 ggagggaggtaaatgtaattacctttgtaattgatttttgagtccgaaggtcttccctgccttggactggagcaccatcccctcaccctaaa 43288200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 648
Target Start/End: Complemental strand, 27879620 - 27879560
Alignment:
Q  588 ctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  27879620 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaattt 27879560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 648
Target Start/End: Complemental strand, 28019801 - 28019741
Alignment:
Q  588 ctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  28019801 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaattt 28019741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 644
Target Start/End: Complemental strand, 44741967 - 44741924
Alignment:
Q  601 ggtcttccctgccttggactggggcaccatcccctcaccctaaa 644  Q
    |||||| |||||||||||||||||  ||||||||||||||||||    
T  44741967 ggtcttacctgccttggactggggtgccatcccctcaccctaaa 44741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 469 - 648
Target Start/End: Complemental strand, 107870 - 107692
Alignment:
Q  469 attaactcaaaaggcttggtctagtggtaaaatgataggtcttgaatccgagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgt 568  Q
    |||||||| |||| |||||||||||||||||| || ||||||||||| ||||||||| || |||||||| ||  ||||||||| ||||||||||||||||    
T  107870 attaactccaaagacttggtctagtggtaaaaagacaggtcttgaattcgagagaacccgagttcgagccccgctagtgcctttggagggaggtaaatgt 107771  T
Q  569 aattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaattt 648  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  107770 aattacctttgtaagtgctctttgagcccgaaggtctaccctgccttggactggggcaccatcccctca-cctaaaattt 107692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0691 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 623
Target Start/End: Complemental strand, 7099 - 6994
Alignment:
Q  518 gagagaactcgggttcgagctccattagtgccttcggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttgg 617  Q
    |||||||  ||||||||||  ||  |||||| || ||||||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||    
T  7099 gagagaatccgggttcgagtcccgctagtgcgtttggagggaagtaaatgtaattacctttgcaagtgttctttgagtccgaaggtcttccctaccttgg 7000  T
Q  618 actggg 623  Q
    ||||||    
T  6999 actggg 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University