View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2786-Insertion-11 (Length: 249)
Name: NF2786-Insertion-11
Description: NF2786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2786-Insertion-11 |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 2889776 - 2890007
Alignment:
| Q |
8 |
caagccaccaaaatgatcataaactttgtaatatatatgacctcaaaattatcatttatgttacgaaaattctaaaaaacgatccttgaatttgtaaaac |
107 |
Q |
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| T |
2889776 |
caagccaccaaaatgatcataaactttgtaatatatatgacctcaaaattatcatttatgttacgaaaattctaaaaaacgatccttgaatttgtaaaac |
2889875 |
T |
|
| Q |
108 |
attaccaaagttggtatatttacgttcctccgtcagttgacacctcttttccatactcttaatacgtaaaaccnnnnnnnnnnctttccatatgtattac |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
2889876 |
attaccaaagttggtatatttacgttcctccgtcagttgacacctcttttccatactcttaatacgtaaaacc-tttttttttctttccatatgtattac |
2889974 |
T |
|
| Q |
208 |
ctacaatctcccttaacattcttccacaaacat |
240 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
2889975 |
ctacaatctcccttaacattcttccacaaacat |
2890007 |
T |
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