View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2786-Insertion-8 (Length: 344)

Name: NF2786-Insertion-8
Description: NF2786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2786-Insertion-8
NF2786-Insertion-8
[»] chr8 (1 HSPs)
chr8 (6-344)||(41847690-41848021)


Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 6 - 344
Target Start/End: Original strand, 41847690 - 41848021
Alignment:
Q  6 caataatcaatactatcactattatccttatttataacccgtatggaggttgcatgtggtagaactgcaacgctggcacaacaattaaaaatgaaaaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41847690 caataatcaatactattactattatccttatttataaccagtatggaggttgcatgtggtagaactgcaacgctggcacaacaattaaaaatgaaaaagt 41847789  T
Q  106 tgccacacggatttaatgcttgcttaaacgtagtagtaacagtcaaataccttggggacgtgtgtgaaactcttataagcagaaacaccttttatatttt 205  Q
    |||||||||||||||||||||    |||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41847790 tgccacacggatttaatgctt----aaacgtagtaata---gtcaaataccttggggacgtgtgtgaaactcttataagcagaaacaccttttatatttt 41847882  T
Q  206 ctaaatgacaagtgcacattactaattaacgcgttaaacccttcaccacccattcatcaactcaaaacatatcccttctctaaaactctcttcttctcaa 305  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41847883 ctaagtgacaagtgcacattactaattaacgcgttaaacccttcaccacccattcatcaactcaaaacaaatcccttctctaaaactctcttcttctcaa 41847982  T
Q  306 ttcctatcttagaagaaaatttaacaaacatggagaaat 344  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41847983 ttcctatcttagaagaaaatttaacaaacatggagaaat 41848021  T

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