View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2786_high_4 (Length: 331)
Name: NF2786_high_4
Description: NF2786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2786_high_4 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 12 - 331
Target Start/End: Original strand, 44753932 - 44754251
Alignment:
| Q |
12 |
acatcatcaccctttgttagattcaattcaagctacaacaacaataaccaactaccaagatacccttcttccactcttagctttagttctcctgaatcaa |
111 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44753932 |
acatcatcaccctttgttagattcaattcaagctacaacaacaataaccaactaccaagatacccttcttccactcttagctttagttctcctgaatcaa |
44754031 |
T |
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| Q |
112 |
atcccatgcattggaatagcttcctcaattatgctactactcaaaatcaaccatttagtaataataggaacaataataacctaagcactttaaactttgg |
211 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44754032 |
atcccatgcattggaatagcttcctcaactatgctactactcaaaatcaaccatatagtaataataggaacaataataacctaagcactttaaactttgg |
44754131 |
T |
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| Q |
212 |
tagacaaaacacaatggaaagtatataccaaacctacatgcnnnnnnncaacaatagttcaaacatttcacaacatgtaggtttacaagatagtactata |
311 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44754132 |
tagacaaaacacaatggaaagtatataccaaacctacatgcaaaaaaacaacaatagttcaaacatttcacaacatgtaggtttacaagatagtactata |
44754231 |
T |
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| Q |
312 |
tctgcagcaacaaaagctat |
331 |
Q |
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|||||||||||||||||||| |
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| T |
44754232 |
tctgcagcaacaaaagctat |
44754251 |
T |
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