View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2787_high_20 (Length: 254)
Name: NF2787_high_20
Description: NF2787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2787_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 10760336 - 10760108
Alignment:
| Q |
20 |
gccatttcaaagctgcaattgggatgtgaaatcgagggaggtagaaggggtggatggatgaaataattagggaggtaaagataatggaagataagacaac |
119 |
Q |
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| T |
10760336 |
gccatttcaaagctgcaattgggatgtgaaatcgagggaggtagaaggggtggatggatgaaataattagggaggtaaagataatggaagataagacaac |
10760237 |
T |
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| Q |
120 |
cacaatagtgaaccagaagaatgtgctccatgaaatggctctgctatgttttctatgatctttcatgagagaaacccaaaacgagaagaaaaatgtaata |
219 |
Q |
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| T |
10760236 |
cacaatagtgaaccaaaagaatgtgctccatgaaatggctctgctatgttttctatgatctttcatgagagaaacccaaaacgagaagaaaaatgtaata |
10760137 |
T |
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| Q |
220 |
gtaatgttctttgggttgcttcatctcac |
248 |
Q |
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| T |
10760136 |
gtaatgttctttgggttgcttcatgtcac |
10760108 |
T |
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