View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2787_high_25 (Length: 243)
Name: NF2787_high_25
Description: NF2787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2787_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 44729871 - 44730099
Alignment:
| Q |
1 |
cctctcttcttcatttatctgcaaactagtttcatattctccaatttcaactttctttttcttcaaaaaccttacaagccaaggaacaaagccttgagag |
100 |
Q |
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| T |
44729871 |
cctctcttcttcatttatctgcaaactagtttcaacttctccaatttcaactttctttttcttcaaaaaccttacaagccaaggaacaaagccttgagag |
44729970 |
T |
|
| Q |
101 |
ctcatgagataattattggtattaagagctgagttagcgatcgaaagaattcgacgacaatcttcggcgcttaatccgacaggcttccctggtttcattg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44729971 |
ctcatgagataattattggtattaagagctgagttagcgatcgaaagaattcgactacaatcttcggcgcttaatccgacaggcttccctggtttcattg |
44730070 |
T |
|
| Q |
201 |
gaaccatgacatattttttgttcatttct |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
44730071 |
gaaccatgacatattttttgttcatttct |
44730099 |
T |
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