View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2787_high_4 (Length: 410)
Name: NF2787_high_4
Description: NF2787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2787_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 9 - 199
Target Start/End: Original strand, 49732579 - 49732765
Alignment:
| Q |
9 |
gaaatgaaaggatgtgtcgttgtatagtcttttgcggcgttgtttaatagggtgacctgacacaaacaagcaatgaccctgaaaatcagattaggttcgg |
108 |
Q |
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| T |
49732579 |
gaaatgaaaggatgtgtcgttgtatagtcttttgcggcgttgtttaatagggtgacctgacacaa----gcaatgaccctgaaaatcagattaggttcgg |
49732674 |
T |
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| Q |
109 |
ggatgtgtatttatttgtttcttctcacttggctggttgcttattactcaagtcaaaattaaggttattcaaagatgaaccatgtctttat |
199 |
Q |
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| T |
49732675 |
ggacgtgtatttatttgtttcttctcacttggctggttgcttattactcaagtcaaaattaaggttattcaaagatgaaccatgtctttat |
49732765 |
T |
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