View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2788_low_3 (Length: 442)
Name: NF2788_low_3
Description: NF2788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2788_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 13 - 426
Target Start/End: Original strand, 32760655 - 32761068
Alignment:
| Q |
13 |
aatattgaaactgcaaaatttgctacttttgaagatggcatcatgctttagcaaaaagggaaaagagattcttattggttctgttgtacagaagagatgg |
112 |
Q |
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| T |
32760655 |
aatattgaaactgcaaaatttgctacttttgaagatggcatcatgctttagcaaaaagggaaaagagattcttattggttctgttgtacagaagagatgg |
32760754 |
T |
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| Q |
113 |
aggaaaggactacatgcttaattgatctatgaataaatatcaaaagagagaacctggctggctctacctaaactctttttgtcagactcaaacgtacatg |
212 |
Q |
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| T |
32760755 |
aggaaaggactacatgcttaattgatctatgaataaatatcaaaagagagaacctggctggctctacctaaactctttttgtcagactcaaacgtacatg |
32760854 |
T |
|
| Q |
213 |
atagccaccaacaatggcctaaaattttcctcattacaaattgttgcatgtgtgtttattacttctatgacaattaatggtgatgataagttgaccatgt |
312 |
Q |
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| T |
32760855 |
atagccaccaacaatggcctaaaatcttcctcattacaaattgttgcatgtgtgtttattacttctatgacaattaatggtgatgataagttgaccatgt |
32760954 |
T |
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| Q |
313 |
aacatatatataccttaaagctggaatgcagagaaaaacatctttgaggggccagggttagatacaatagtataaatgtggggtgtgtttttgtttcaca |
412 |
Q |
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| T |
32760955 |
aacatatatataccttaaagctggaatgcagagaaaaacatctttgaggggccagggttagatacaatagtataaatgtggggtgtgtttttgtttcaca |
32761054 |
T |
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| Q |
413 |
attggaatcaatta |
426 |
Q |
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| T |
32761055 |
attggaatcaatta |
32761068 |
T |
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