View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2791_high_4 (Length: 263)
Name: NF2791_high_4
Description: NF2791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2791_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 28859872 - 28859620
Alignment:
| Q |
1 |
tccagttgtatgatattcgatcagagacaacaatccagggcacaacaacaacataatccagcacaactgcaaaaagaaataaatatacaaaacaaaagtc |
100 |
Q |
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| T |
28859872 |
tccagttgtatgatattcgatcagagacaacaatccagggcacaacaacaacataatccagcacaactgcaaaaagaaaaatatatacaaaacaaaagtc |
28859773 |
T |
|
| Q |
101 |
agatatatttatactaaacaatgtttggaatacaannnnnnnnnnnntcatagacga----aaaactataaaaataaatctttaatttaatcactgattt |
196 |
Q |
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| T |
28859772 |
agatatatttatactaaaaaatgtttggactacaa----atatatattcatagacgaaattaaaactataaaaataaatctttaatttaatcactgattt |
28859677 |
T |
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| Q |
197 |
tattactataattaccacagtgttacatatatcaaaaatctaagttcaacttcatttt |
254 |
Q |
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| T |
28859676 |
tattactataattactacagtgttacatatatc-aaaatctaagctcaacttcgtttt |
28859620 |
T |
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