View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2791_high_7 (Length: 245)
Name: NF2791_high_7
Description: NF2791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2791_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 28859613 - 28859399
Alignment:
| Q |
12 |
aatgacaaatatttataattagttgttagactaannnnnnnctccttcgttagggtttgaacctaacacctctaacttctttttcttttaagtcaaggtt |
111 |
Q |
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| T |
28859613 |
aatgacaaatgtttataattagttgttagactaattttttccaccttcgttagggtttgaacgtaattcctctaatttctttttcttt-aactcaaggtt |
28859515 |
T |
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| Q |
112 |
ttcaatttctattgagaaatcaatatattgaaacttaataaaataagataaacatatatagttatatacttattctttcnnnnnnntaatatagttatag |
211 |
Q |
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| T |
28859514 |
ttcaatttctattgagaaatcaatatattgaaacttaataaaataagataaacatatatagttatag--ttattctttcaaaaaaataatatagttatag |
28859417 |
T |
|
| Q |
212 |
ttattaattaggtataat |
229 |
Q |
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|||||||||||||||||| |
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| T |
28859416 |
ttattaattaggtataat |
28859399 |
T |
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