View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2792-Insertion-20 (Length: 68)
Name: NF2792-Insertion-20
Description: NF2792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2792-Insertion-20 |
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Alignment Details
Target: chr7 (Bit Score: 35; Significance: 0.00000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 36966550 - 36966516
Alignment:
| Q |
14 |
tgtcatcaattaaaatacaaatatgaaaaaggata |
48 |
Q |
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| T |
36966550 |
tgtcatcaattaaaatacaaatatgaaaaaggata |
36966516 |
T |
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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 36965527 - 36965499
Alignment:
| Q |
40 |
aaaaggatataatctttttgacaaatata |
68 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
36965527 |
aaaaggatataatctttttgacaaatata |
36965499 |
T |
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