View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2793_high_11 (Length: 331)
Name: NF2793_high_11
Description: NF2793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2793_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 219 - 330
Target Start/End: Original strand, 35443538 - 35443649
Alignment:
| Q |
219 |
ataaaattatatattcaaggtacaaaatcaaattatttgactttttgaataaataacatttttatttagatattataattcacagtttgacattttagat |
318 |
Q |
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| T |
35443538 |
ataaaattatatattcaatgtacaaaatcaaattatttaactttttgaataaataacatttttatttagatattctaattcacagtttgactttttagat |
35443637 |
T |
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| Q |
319 |
ttattagataat |
330 |
Q |
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|||||||||||| |
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| T |
35443638 |
ttattagataat |
35443649 |
T |
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Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35443334 - 35443393
Alignment:
| Q |
1 |
tcttgacgagtaataagagtatgcattgcggatccacttgacgtatcgcaaatattagag |
60 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35443334 |
tcttgacgagtaataagagtatgcattgcggatccacttgacgtatcgcaaatattagag |
35443393 |
T |
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