View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2794_high_14 (Length: 255)

Name: NF2794_high_14
Description: NF2794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2794_high_14
NF2794_high_14
[»] chr7 (71 HSPs)
chr7 (4-247)||(42805554-42805797)
chr7 (4-111)||(47716489-47716596)
chr7 (112-247)||(42763053-42763191)
chr7 (4-113)||(43557502-43557612)
chr7 (5-113)||(7879669-7879775)
chr7 (1-82)||(46354221-46354302)
chr7 (4-112)||(21172008-21172112)
chr7 (16-113)||(42391098-42391193)
chr7 (5-114)||(42798700-42798807)
chr7 (4-111)||(2541019-2541124)
chr7 (1-111)||(48735122-48735228)
chr7 (4-113)||(32758291-32758396)
chr7 (1-110)||(11617589-11617696)
chr7 (4-113)||(27629664-27629771)
chr7 (4-111)||(10693073-10693176)
chr7 (5-111)||(22698967-22699074)
chr7 (4-110)||(29907449-29907552)
chr7 (1-107)||(33871914-33872017)
chr7 (4-110)||(16341308-16341413)
chr7 (4-113)||(19426888-19426994)
chr7 (4-102)||(21566465-21566562)
chr7 (1-112)||(31591108-31591215)
chr7 (4-111)||(23419674-23419779)
chr7 (4-102)||(28362155-28362250)
chr7 (15-113)||(34626206-34626302)
chr7 (1-109)||(18512455-18512560)
chr7 (5-113)||(38262194-38262300)
chr7 (14-110)||(3469176-3469272)
chr7 (8-110)||(18747520-18747621)
chr7 (26-113)||(27889314-27889399)
chr7 (10-109)||(35334818-35334915)
chr7 (5-112)||(40463908-40464012)
chr7 (15-113)||(19265855-19265950)
chr7 (16-110)||(42476913-42477005)
chr7 (1-113)||(32233133-32233242)
chr7 (4-112)||(35787268-35787373)
chr7 (4-103)||(38604557-38604654)
chr7 (16-110)||(11741835-11741927)
chr7 (4-113)||(1408487-1408594)
chr7 (11-111)||(14732821-14732920)
chr7 (7-90)||(19266483-19266564)
chr7 (26-111)||(45018923-45019010)
chr7 (26-112)||(39123945-39124031)
chr7 (64-113)||(36602535-36602584)
chr7 (17-114)||(39093436-39093532)
chr7 (10-114)||(13792147-13792250)
chr7 (4-111)||(23231587-23231692)
chr7 (17-108)||(33500556-33500645)
chr7 (49-113)||(47077853-47077917)
chr7 (4-87)||(48123508-48123589)
chr7 (4-101)||(2662946-2663038)
chr7 (14-92)||(28078151-28078227)
chr7 (3-71)||(8148985-8149052)
chr7 (49-114)||(23618974-23619039)
chr7 (5-66)||(35203470-35203531)
chr7 (8-52)||(1423967-1424011)
chr7 (8-67)||(14099050-14099107)
chr7 (8-67)||(14409067-14409124)
chr7 (49-113)||(45811920-45811983)
chr7 (4-66)||(7644986-7645047)
chr7 (1-47)||(12473331-12473377)
chr7 (1-109)||(27697464-27697572)
chr7 (80-113)||(44171635-44171668)
chr7 (22-113)||(13805149-13805237)
chr7 (11-67)||(17048859-17048914)
chr7 (5-112)||(23065924-23066029)
chr7 (49-113)||(25198799-25198863)
chr7 (5-100)||(25434050-25434144)
chr7 (5-98)||(21139761-21139851)
chr7 (4-97)||(5180169-5180262)
chr7 (60-108)||(42495865-42495913)
[»] chr4 (87 HSPs)
chr4 (125-247)||(33049064-33049187)
chr4 (4-113)||(16408599-16408708)
chr4 (4-113)||(23501817-23501926)
chr4 (4-108)||(21646994-21647098)
chr4 (4-115)||(13256395-13256506)
chr4 (4-113)||(20639656-20639764)
chr4 (19-111)||(20225119-20225211)
chr4 (5-114)||(25629080-25629187)
chr4 (5-111)||(48327763-48327869)
chr4 (4-112)||(16911592-16911700)
chr4 (1-111)||(20225011-20225117)
chr4 (4-111)||(20405116-20405224)
chr4 (4-111)||(44363130-44363237)
chr4 (4-114)||(54175094-54175203)
chr4 (4-113)||(47443987-47444094)
chr4 (5-113)||(30639411-30639516)
chr4 (4-114)||(5648289-5648396)
chr4 (4-109)||(29207900-29208001)
chr4 (13-111)||(30690176-30690272)
chr4 (1-113)||(9987832-9987942)
chr4 (4-114)||(9832310-9832416)
chr4 (4-110)||(6430627-6430730)
chr4 (18-110)||(8473621-8473713)
chr4 (34-113)||(33836485-33836564)
chr4 (4-113)||(47528528-47528633)
chr4 (4-113)||(48598823-48598928)
chr4 (4-113)||(17043393-17043499)
chr4 (1-113)||(10660431-10660543)
chr4 (1-113)||(10874576-10874688)
chr4 (1-101)||(19027875-19027973)
chr4 (4-112)||(51865037-51865143)
chr4 (7-113)||(35567203-35567307)
chr4 (16-113)||(11054146-11054241)
chr4 (14-113)||(30352578-30352681)
chr4 (4-112)||(14983864-14983970)
chr4 (50-113)||(32484307-32484370)
chr4 (4-110)||(40915859-40915962)
chr4 (16-102)||(16494259-16494345)
chr4 (1-114)||(25463149-25463259)
chr4 (4-113)||(54730279-54730389)
chr4 (1-97)||(37494878-37494972)
chr4 (46-111)||(38755908-38755973)
chr4 (4-93)||(39029078-39029166)
chr4 (13-113)||(20908634-20908733)
chr4 (5-113)||(25343218-25343326)
chr4 (49-113)||(38786682-38786746)
chr4 (5-110)||(7909281-7909384)
chr4 (1-95)||(30581481-30581575)
chr4 (2-108)||(54967049-54967151)
chr4 (4-106)||(21489117-21489218)
chr4 (4-113)||(5306658-5306768)
chr4 (11-114)||(10277754-10277855)
chr4 (49-111)||(11394925-11394987)
chr4 (49-111)||(11404652-11404714)
chr4 (15-113)||(36816382-36816479)
chr4 (60-114)||(56322984-56323038)
chr4 (50-111)||(40553937-40553998)
chr4 (50-111)||(44718641-44718702)
chr4 (49-113)||(28494224-28494288)
chr4 (1-111)||(32478792-32478893)
chr4 (4-113)||(39077794-39077899)
chr4 (18-111)||(2813169-2813263)
chr4 (6-112)||(7038084-7038188)
chr4 (51-113)||(19027986-19028048)
chr4 (49-111)||(25388249-25388311)
chr4 (35-93)||(49938611-49938668)
chr4 (61-113)||(35532077-35532129)
chr4 (1-110)||(12711450-12711558)
chr4 (16-90)||(49796839-49796911)
chr4 (46-113)||(50555654-50555721)
chr4 (17-111)||(55766466-55766558)
chr4 (2-91)||(3580860-3580947)
chr4 (43-112)||(47482849-47482918)
chr4 (4-108)||(36589773-36589876)
chr4 (46-97)||(8820578-8820629)
chr4 (22-100)||(30496333-30496409)
chr4 (8-67)||(35894505-35894563)
chr4 (1-98)||(41018807-41018901)
chr4 (6-66)||(17079696-17079754)
chr4 (5-73)||(47441568-47441634)
chr4 (1-46)||(51420601-51420646)
chr4 (14-60)||(14590878-14590922)
chr4 (17-111)||(55830721-55830813)
chr4 (1-102)||(487135-487243)
chr4 (4-88)||(7385499-7385581)
chr4 (50-110)||(21003410-21003469)
chr4 (59-111)||(34256982-34257034)
[»] chr3 (75 HSPs)
chr3 (4-113)||(13730600-13730709)
chr3 (4-113)||(49013471-49013580)
chr3 (10-109)||(353351-353450)
chr3 (4-112)||(13628789-13628897)
chr3 (1-113)||(40272810-40272920)
chr3 (4-111)||(14987009-14987116)
chr3 (4-113)||(46421032-46421142)
chr3 (4-112)||(29366719-29366827)
chr3 (4-111)||(45786214-45786321)
chr3 (1-114)||(53996562-53996674)
chr3 (4-94)||(9607255-9607345)
chr3 (4-112)||(12914034-12914140)
chr3 (4-114)||(54484742-54484851)
chr3 (4-111)||(10795423-10795530)
chr3 (4-113)||(516461-516571)
chr3 (4-109)||(8247688-8247794)
chr3 (1-110)||(45139479-45139586)
chr3 (1-101)||(45948848-45948946)
chr3 (4-114)||(1217142-1217248)
chr3 (1-113)||(54374343-54374454)
chr3 (4-113)||(15797274-15797379)
chr3 (16-114)||(34771361-34771457)
chr3 (4-111)||(31592901-31593004)
chr3 (4-111)||(39203568-39203671)
chr3 (1-113)||(5173717-5173828)
chr3 (16-110)||(22122918-22123010)
chr3 (4-110)||(22609818-22609921)
chr3 (4-114)||(34420640-34420749)
chr3 (15-113)||(26869769-26869865)
chr3 (4-109)||(26573179-26573282)
chr3 (4-100)||(6411833-6411926)
chr3 (15-112)||(16735503-16735598)
chr3 (24-113)||(52926217-52926304)
chr3 (4-113)||(25944521-25944629)
chr3 (6-113)||(7943044-7943149)
chr3 (49-113)||(24851299-24851363)
chr3 (4-95)||(33926135-33926224)
chr3 (4-112)||(25517169-25517276)
chr3 (51-112)||(30452892-30452953)
chr3 (4-111)||(9276316-9276419)
chr3 (4-107)||(19731054-19731155)
chr3 (1-112)||(54032570-54032667)
chr3 (1-101)||(829452-829551)
chr3 (4-107)||(55401228-55401330)
chr3 (4-114)||(44403552-44403661)
chr3 (4-73)||(47624094-47624160)
chr3 (8-113)||(4495674-4495765)
chr3 (56-112)||(10484615-10484671)
chr3 (49-113)||(24577930-24577994)
chr3 (49-113)||(24578020-24578084)
chr3 (4-114)||(26292384-26292490)
chr3 (4-91)||(30928167-30928252)
chr3 (49-113)||(35417999-35418063)
chr3 (10-91)||(8410887-8410966)
chr3 (4-113)||(12525459-12525566)
chr3 (63-113)||(47624208-47624258)
chr3 (4-113)||(50624951-50625058)
chr3 (11-110)||(31904857-31904955)
chr3 (4-107)||(19751630-19751731)
chr3 (4-110)||(33235583-33235687)
chr3 (78-113)||(40390365-40390400)
chr3 (49-112)||(40968613-40968676)
chr3 (4-47)||(52428539-52428582)
chr3 (4-97)||(43114882-43114975)
chr3 (4-48)||(45620889-45620934)
chr3 (69-113)||(6242283-6242327)
chr3 (69-113)||(43956470-43956514)
chr3 (69-111)||(31831301-31831343)
chr3 (52-113)||(10696211-10696272)
chr3 (78-111)||(14266372-14266405)
chr3 (78-111)||(23871490-23871523)
chr3 (6-110)||(16130329-16130432)
chr3 (1-44)||(21875062-21875106)
chr3 (4-47)||(31831251-31831292)
chr3 (49-97)||(46169981-46170029)
[»] chr8 (55 HSPs)
chr8 (1-113)||(7136525-7136637)
chr8 (5-113)||(20869954-20870062)
chr8 (4-113)||(6760852-6760961)
chr8 (4-112)||(26954162-26954271)
chr8 (4-112)||(39460993-39461101)
chr8 (4-111)||(16225049-16225156)
chr8 (8-114)||(25250556-25250662)
chr8 (1-112)||(44530176-44530285)
chr8 (4-114)||(28817623-28817731)
chr8 (1-112)||(12625916-12626026)
chr8 (5-113)||(35261710-35261816)
chr8 (4-112)||(36720826-36720932)
chr8 (1-113)||(8897762-8897872)
chr8 (4-111)||(29521685-29521790)
chr8 (4-113)||(12670248-12670353)
chr8 (14-105)||(20284075-20284166)
chr8 (14-105)||(21070703-21070794)
chr8 (1-102)||(8483947-8484046)
chr8 (1-98)||(44781517-44781614)
chr8 (4-111)||(13160732-13160836)
chr8 (4-113)||(30454095-30454200)
chr8 (4-110)||(45071295-45071398)
chr8 (8-109)||(29877128-29877227)
chr8 (4-114)||(10857858-10857967)
chr8 (4-114)||(5135287-5135394)
chr8 (14-111)||(2626562-2626657)
chr8 (4-108)||(17250879-17250982)
chr8 (4-111)||(17823606-17823711)
chr8 (35-114)||(16013515-16013594)
chr8 (16-112)||(19729382-19729476)
chr8 (9-114)||(44742515-44742619)
chr8 (34-113)||(26102577-26102654)
chr8 (4-106)||(5689661-5689761)
chr8 (4-71)||(43942354-43942421)
chr8 (1-112)||(31457200-31457308)
chr8 (4-113)||(18164758-18164864)
chr8 (4-100)||(24365071-24365165)
chr8 (1-99)||(22598184-22598279)
chr8 (49-111)||(28407476-28407538)
chr8 (4-101)||(389673-389770)
chr8 (4-111)||(23000228-23000323)
chr8 (8-111)||(33866983-33867087)
chr8 (62-113)||(27468090-27468141)
chr8 (51-110)||(27507985-27508044)
chr8 (49-112)||(35107310-35107373)
chr8 (21-113)||(26457776-26457864)
chr8 (4-88)||(20869523-20869601)
chr8 (5-90)||(14017989-14018073)
chr8 (1-66)||(35105950-35106014)
chr8 (50-110)||(36486567-36486627)
chr8 (69-111)||(23286337-23286379)
chr8 (8-110)||(42083699-42083800)
chr8 (49-113)||(2351719-2351780)
chr8 (56-113)||(18595918-18595975)
chr8 (6-47)||(36918156-36918197)
[»] chr5 (64 HSPs)
chr5 (4-112)||(4619103-4619211)
chr5 (4-111)||(13801767-13801874)
chr5 (4-112)||(38879611-38879719)
chr5 (4-110)||(20135634-20135740)
chr5 (1-110)||(12006329-12006438)
chr5 (4-112)||(41014349-41014454)
chr5 (14-114)||(43334243-43334342)
chr5 (5-112)||(27328783-27328890)
chr5 (8-113)||(24448924-24449027)
chr5 (4-112)||(32703454-32703558)
chr5 (16-114)||(8169981-8170077)
chr5 (4-111)||(16880647-16880752)
chr5 (4-108)||(7368428-7368528)
chr5 (20-111)||(34154814-34154903)
chr5 (5-102)||(43574637-43574732)
chr5 (4-112)||(28516432-28516539)
chr5 (4-112)||(29334425-29334532)
chr5 (40-111)||(25622524-25622595)
chr5 (4-113)||(35710343-35710448)
chr5 (35-112)||(16957375-16957450)
chr5 (1-102)||(208936-209035)
chr5 (1-113)||(19142941-19143050)
chr5 (1-111)||(42924830-42924942)
chr5 (8-71)||(41425982-41426043)
chr5 (24-113)||(11657697-11657785)
chr5 (52-113)||(16028622-16028683)
chr5 (4-99)||(7097772-7097864)
chr5 (14-112)||(3771379-3771475)
chr5 (4-111)||(22187315-22187422)
chr5 (16-101)||(9794388-9794471)
chr5 (51-112)||(39801591-39801652)
chr5 (1-111)||(1565458-1565566)
chr5 (4-111)||(12575660-12575767)
chr5 (47-111)||(30877564-30877628)
chr5 (1-91)||(24323725-24323813)
chr5 (1-91)||(24360349-24360437)
chr5 (1-113)||(1405214-1405324)
chr5 (1-102)||(39301150-39301249)
chr5 (8-91)||(22600488-22600569)
chr5 (6-88)||(2838811-2838890)
chr5 (1-107)||(30006352-30006456)
chr5 (55-113)||(10943843-10943900)
chr5 (10-99)||(31694120-31694207)
chr5 (4-111)||(5873322-5873426)
chr5 (36-92)||(10306493-10306548)
chr5 (60-112)||(32354211-32354263)
chr5 (49-108)||(21784335-21784394)
chr5 (49-112)||(22861668-22861731)
chr5 (25-99)||(12477132-12477205)
chr5 (8-113)||(24903694-24903797)
chr5 (4-71)||(22907904-22907969)
chr5 (2-101)||(1850668-1850764)
chr5 (78-110)||(29184062-29184094)
chr5 (47-99)||(29297862-29297914)
chr5 (49-99)||(4654427-4654477)
chr5 (75-109)||(11462924-11462958)
chr5 (64-106)||(18684361-18684403)
chr5 (11-64)||(2432342-2432395)
chr5 (69-110)||(19438759-19438800)
chr5 (57-113)||(19093894-19093950)
chr5 (4-32)||(22025573-22025601)
chr5 (1-33)||(23974807-23974839)
chr5 (4-102)||(34074573-34074667)
chr5 (35-107)||(39079755-39079826)
[»] chr1 (79 HSPs)
chr1 (4-112)||(20004089-20004197)
chr1 (4-112)||(30395725-30395833)
chr1 (4-112)||(35005176-35005284)
chr1 (4-113)||(18944696-18944806)
chr1 (4-112)||(10668278-10668386)
chr1 (14-114)||(18741954-18742054)
chr1 (4-113)||(46247951-46248058)
chr1 (12-111)||(4349699-4349796)
chr1 (4-113)||(27201700-27201809)
chr1 (1-113)||(46991854-46991964)
chr1 (4-114)||(35253184-35253290)
chr1 (4-106)||(23768325-23768425)
chr1 (4-112)||(34725097-34725201)
chr1 (16-113)||(45812535-45812630)
chr1 (4-112)||(14617091-14617197)
chr1 (4-112)||(32632556-32632661)
chr1 (37-113)||(50606487-50606563)
chr1 (4-113)||(1517309-1517417)
chr1 (4-113)||(38478280-38478385)
chr1 (4-113)||(23796518-23796625)
chr1 (4-113)||(31382212-31382318)
chr1 (15-113)||(42304205-42304303)
chr1 (1-99)||(45264411-45264508)
chr1 (16-112)||(19414502-19414596)
chr1 (8-109)||(19932755-19932856)
chr1 (17-113)||(43768205-43768299)
chr1 (5-112)||(41319805-41319910)
chr1 (4-113)||(6925153-6925260)
chr1 (16-113)||(47214574-47214669)
chr1 (1-117)||(9939511-9939628)
chr1 (16-108)||(10378738-10378828)
chr1 (16-112)||(12126836-12126930)
chr1 (4-109)||(22324946-22325049)
chr1 (1-113)||(35019280-35019389)
chr1 (4-109)||(15511150-15511256)
chr1 (4-111)||(35117765-35117873)
chr1 (30-113)||(45402175-45402256)
chr1 (1-108)||(39214961-39215067)
chr1 (4-113)||(19701623-19701731)
chr1 (5-112)||(27474335-27474439)
chr1 (4-113)||(8197096-8197203)
chr1 (1-89)||(25468285-25468371)
chr1 (4-91)||(18724565-18724650)
chr1 (1-101)||(27136661-27136760)
chr1 (1-91)||(11596563-11596650)
chr1 (7-112)||(20999849-20999952)
chr1 (14-104)||(31442396-31442485)
chr1 (13-112)||(6983810-6983907)
chr1 (1-97)||(43207545-43207640)
chr1 (6-113)||(50811994-50812100)
chr1 (15-114)||(6358185-6358283)
chr1 (4-66)||(17470390-17470451)
chr1 (1-102)||(44485119-44485217)
chr1 (4-101)||(2435796-2435892)
chr1 (49-106)||(4587568-4587625)
chr1 (51-112)||(33594130-33594191)
chr1 (4-112)||(19656104-19656211)
chr1 (19-100)||(15505632-15505710)
chr1 (4-116)||(20169084-20169194)
chr1 (23-99)||(7074588-7074663)
chr1 (49-113)||(30555211-30555275)
chr1 (1-109)||(34679217-34679327)
chr1 (14-113)||(46859129-46859227)
chr1 (1-47)||(24564394-24564440)
chr1 (6-47)||(4430088-4430129)
chr1 (56-113)||(16120819-16120876)
chr1 (15-112)||(19974073-19974169)
chr1 (1-57)||(22327149-22327204)
chr1 (49-99)||(1693222-1693273)
chr1 (75-114)||(21773636-21773675)
chr1 (4-102)||(34148969-34149065)
chr1 (58-108)||(28894561-28894611)
chr1 (4-62)||(33223037-33223093)
chr1 (15-67)||(21910693-21910743)
chr1 (69-114)||(24564450-24564495)
chr1 (35-102)||(23371207-23371271)
chr1 (49-113)||(41440600-41440664)
chr1 (78-114)||(50760237-50760273)
chr1 (4-48)||(50760287-50760331)
[»] chr6 (52 HSPs)
chr6 (4-114)||(29355852-29355962)
chr6 (4-112)||(12221913-12222022)
chr6 (1-113)||(2166408-2166520)
chr6 (1-113)||(2178041-2178153)
chr6 (38-113)||(12892071-12892146)
chr6 (16-113)||(1347004-1347099)
chr6 (4-112)||(1354756-1354860)
chr6 (4-113)||(9161153-9161261)
chr6 (4-114)||(26097190-26097296)
chr6 (4-114)||(25557755-25557861)
chr6 (30-112)||(12885967-12886049)
chr6 (37-107)||(14975094-14975164)
chr6 (1-111)||(7947371-7947480)
chr6 (4-79)||(6024263-6024338)
chr6 (4-102)||(19340858-19340954)
chr6 (1-113)||(1941882-1941992)
chr6 (48-113)||(6808467-6808532)
chr6 (37-114)||(13267788-13267863)
chr6 (4-113)||(18277191-18277298)
chr6 (36-113)||(3116127-3116204)
chr6 (4-113)||(9671082-9671190)
chr6 (4-113)||(24097611-24097714)
chr6 (23-94)||(32579474-32579543)
chr6 (15-110)||(2755422-2755518)
chr6 (50-112)||(23930126-23930188)
chr6 (35-111)||(383760-383834)
chr6 (56-113)||(20906784-20906841)
chr6 (3-47)||(13905041-13905085)
chr6 (1-100)||(33138860-33138957)
chr6 (4-111)||(12889456-12889562)
chr6 (6-89)||(14553543-14553626)
chr6 (21-111)||(17432393-17432483)
chr6 (4-112)||(28007658-28007761)
chr6 (2-64)||(32068121-32068182)
chr6 (8-104)||(3815084-3815178)
chr6 (51-111)||(10734905-10734965)
chr6 (1-112)||(32728156-32728264)
chr6 (12-109)||(15866041-15866134)
chr6 (14-93)||(24734682-24734760)
chr6 (4-42)||(8409273-8409311)
chr6 (1-67)||(11849080-11849145)
chr6 (31-104)||(16895704-16895778)
chr6 (76-114)||(25997749-25997787)
chr6 (34-101)||(16915996-16916064)
chr6 (7-113)||(24751066-24751176)
chr6 (78-113)||(30786372-30786407)
chr6 (51-101)||(11395836-11395886)
chr6 (15-109)||(18254559-18254651)
chr6 (52-114)||(33922854-33922916)
chr6 (5-116)||(12228389-12228498)
chr6 (13-45)||(14341134-14341166)
chr6 (56-92)||(29016301-29016337)
[»] chr2 (66 HSPs)
chr2 (4-111)||(10543728-10543835)
chr2 (4-111)||(14530348-14530455)
chr2 (8-112)||(5841062-5841166)
chr2 (4-112)||(8455315-8455421)
chr2 (14-113)||(10546203-10546300)
chr2 (4-112)||(24200622-24200730)
chr2 (4-112)||(9671211-9671315)
chr2 (4-112)||(21779260-21779364)
chr2 (4-114)||(31158436-31158546)
chr2 (4-112)||(11514466-11514571)
chr2 (4-113)||(14444759-14444865)
chr2 (16-113)||(36871534-36871628)
chr2 (2-113)||(17668030-17668139)
chr2 (4-111)||(40762234-40762339)
chr2 (1-91)||(32781308-32781396)
chr2 (1-113)||(17623591-17623701)
chr2 (17-113)||(25249736-25249830)
chr2 (1-111)||(25079717-25079826)
chr2 (1-114)||(17896286-17896398)
chr2 (14-112)||(44643563-44643659)
chr2 (4-108)||(4516354-4516456)
chr2 (4-111)||(23397796-23397899)
chr2 (14-98)||(24890451-24890533)
chr2 (1-112)||(39914305-39914414)
chr2 (4-114)||(21377071-21377178)
chr2 (9-111)||(25632544-25632644)
chr2 (1-111)||(40416871-40416979)
chr2 (51-112)||(34080176-34080237)
chr2 (5-113)||(7214565-7214673)
chr2 (4-99)||(19615022-19615116)
chr2 (37-112)||(23488544-23488619)
chr2 (50-109)||(41409936-41409995)
chr2 (57-111)||(3633708-3633762)
chr2 (4-113)||(30826067-30826172)
chr2 (1-91)||(33795312-33795400)
chr2 (4-111)||(14544093-14544201)
chr2 (50-110)||(40579750-40579810)
chr2 (5-92)||(44521392-44521477)
chr2 (3-116)||(26684615-26684727)
chr2 (4-114)||(27573651-27573758)
chr2 (4-101)||(12023929-12024023)
chr2 (4-101)||(17471578-17471675)
chr2 (51-113)||(34766330-34766392)
chr2 (11-95)||(99281-99363)
chr2 (5-73)||(23145736-23145802)
chr2 (5-73)||(23557526-23557592)
chr2 (1-113)||(24859986-24860094)
chr2 (60-113)||(39189502-39189555)
chr2 (23-110)||(13245096-13245181)
chr2 (15-73)||(22371095-22371151)
chr2 (47-112)||(1289093-1289159)
chr2 (4-113)||(19977712-19977819)
chr2 (1-99)||(44449395-44449492)
chr2 (8-113)||(15296404-15296508)
chr2 (63-112)||(22371199-22371248)
chr2 (1-66)||(5450312-5450376)
chr2 (56-111)||(8575975-8576030)
chr2 (49-108)||(31525779-31525838)
chr2 (16-113)||(25641543-25641638)
chr2 (49-103)||(31523304-31523358)
chr2 (63-107)||(124918-124962)
chr2 (17-111)||(19185743-19185837)
chr2 (64-114)||(23052962-23053012)
chr2 (49-98)||(4794875-4794924)
chr2 (1-47)||(29419947-29419997)
chr2 (49-113)||(45235815-45235879)
[»] scaffold0057 (4 HSPs)
scaffold0057 (1-113)||(46858-46968)
scaffold0057 (4-113)||(24770-24877)
scaffold0057 (21-97)||(46721-46796)
scaffold0057 (16-112)||(43699-43794)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-111)||(59007-59114)
[»] scaffold0015 (1 HSPs)
scaffold0015 (4-112)||(48633-48737)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-112)||(10837-10946)
[»] scaffold0168 (1 HSPs)
scaffold0168 (4-113)||(30609-30714)
[»] scaffold0258 (1 HSPs)
scaffold0258 (15-114)||(13021-13118)
[»] scaffold1176 (1 HSPs)
scaffold1176 (1-107)||(1591-1693)
[»] scaffold0180 (1 HSPs)
scaffold0180 (22-113)||(24131-24220)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-111)||(72867-72971)
[»] scaffold0223 (1 HSPs)
scaffold0223 (4-111)||(11161-11264)
[»] scaffold0187 (2 HSPs)
scaffold0187 (4-109)||(10052-10153)
scaffold0187 (4-109)||(20380-20481)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-73)||(4184-4257)
[»] scaffold0954 (1 HSPs)
scaffold0954 (4-111)||(3574-3679)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-72)||(23626-23695)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-66)||(35062-35110)
[»] scaffold0028 (1 HSPs)
scaffold0028 (2-61)||(32958-33016)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-60)||(226456-226500)
[»] scaffold0194 (1 HSPs)
scaffold0194 (22-113)||(24696-24785)


Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 4 - 247
Target Start/End: Original strand, 42805554 - 42805797
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42805554 cctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggt 42805653  T
Q  104 tgccctttttagtgaaaattataaaaataatatttctaactgaagttcaaaataagtaactcaagaccagttttttacatgtaactcttgcatatcctaa 203  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42805654 tgccctttttagtgaaaattataaaaataatatttctaagtgaagttcaaaataagtaactcaagaccagttttttacatgtaactcttgcatatcctaa 42805753  T
Q  204 gcactccataccttgaaccgcacactgtttcaaatgtctgtgct 247  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  42805754 gcactccataccttgaaccgcacactgtttcaaatgtctttgct 42805797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 47716489 - 47716596
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  47716489 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggt 47716588  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  47716589 tgcccttt 47716596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 247
Target Start/End: Original strand, 42763053 - 42763191
Alignment:
Q  112 ttagtgaaaattataaaaataatatttctaac---tgaagttcaaaataagtaactcaagaccagttttttacatgtaactcttgcatatcctaagcact 208  Q
    ||||| |||||||||||| ||||||||||||    |||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| ||    
T  42763053 ttagtaaaaattataaaattaatatttctaaaaagtgaagttcaaaataagtaactcaagaccagttttttacatctagctcttgcatatcttaagcgct 42763152  T
Q  209 ccataccttgaaccgcacactgtttcaaatgtctgtgct 247  Q
    ||||||||||||| |||||| ||||||||||||| ||||    
T  42763153 ccataccttgaactgcacacagtttcaaatgtctttgct 42763191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 43557502 - 43557612
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagc-tttagtgcaccggg 102  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||| | || ||||||||||| ||||||||||||||    
T  43557502 cctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccggg 43557601  T
Q  103 ttgcccttttt 113  Q
    |||||||||||    
T  43557602 ttgcccttttt 43557612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 7879669 - 7879775
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||| ||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||||||||| |||||||||||||    
T  7879669 ctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcaccgggtt 7879766  T
Q  105 gcccttttt 113  Q
    |||||||||    
T  7879767 gcccttttt 7879775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 46354221 - 46354302
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgc 82  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46354221 caacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 46354302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 21172112 - 21172008
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  21172112 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 21172017  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  21172016 tgccctttt 21172008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 42391193 - 42391098
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  42391193 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 42391098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 42798700 - 42798807
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||| ||||||||||| |||||||||||||  |||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||||||    
T  42798700 ctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa--atggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggtt 42798797  T
Q  105 gcccttttta 114  Q
    ||||||||||    
T  42798798 gcccttttta 42798807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 2541124 - 2541019
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||||||| | ||| || ||||||||||||||||||||||||||    
T  2541124 cctcttgtgtaaaaaacagggtaaggctgcgtactatacaccaa--atggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggt 2541027  T
Q  104 tgcccttt 111  Q
    | ||||||    
T  2541026 ttcccttt 2541019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 48735228 - 48735122
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||| ||  ||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  48735228 caacctcttgtgtaaaacac--ggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 48735133  T
Q  101 ggttgcccttt 111  Q
    |||||||||||    
T  48735132 ggttgcccttt 48735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 32758291 - 32758396
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||  |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  32758291 cctcttgtgtaaaa--cagggtaaggctgtgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 32758386  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  32758387 tgcccttttt 32758396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11617696 - 11617589
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||||  ||||| || ||||| ||| |||||||||||||    
T  11617696 caacctcttgtgtaaaaaacagggtaagactgcgtacaatacacca--aatggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccg 11617599  T
Q  101 ggttgccctt 110  Q
    ||||||||||    
T  11617598 ggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 27629664 - 27629771
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||| ||| || ||||||||||  |||||||||||||||||| | ||| |||||||||| ||||| ||||||||||||    
T  27629664 cctcttgtgtaaaaaacagggtaaggttgcgtaaaatacaccaa--atggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggt 27629761  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  27629762 tgcccttttt 27629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 10693176 - 10693073
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| |  |||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||    
T  10693176 cctcttgtgtaaaaga--gggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggt 10693081  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  10693080 tgcccttt 10693073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 22699074 - 22698967
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccc-cttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||  ||||| ||||| |  |||||||||||| |||||||||||||    
T  22699074 ctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccgggt 22698975  T
Q  104 tgcccttt 111  Q
    | ||||||    
T  22698974 tacccttt 22698967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 29907449 - 29907552
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||| || |||||||||| | ||||||||||| |||||||||||||| |||| ||||| |  ||||||||||||||||||||||||||    
T  29907449 cctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaa-aatggtgggaccccatcccggaccctg--tatgcgggagctttagtgcaccgggt 29907545  T
Q  104 tgccctt 110  Q
    |||||||    
T  29907546 tgccctt 29907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33872017 - 33871914
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||  |||||||||||||||||||||||| |  |||||| |||||||||||||||     
T  33872017 caacctcttgtgtaaaaa-caggataaggctgcgtacaatacaccaa--atggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcacca 33871921  T
Q  101 ggttgcc 107  Q
    |||||||    
T  33871920 ggttgcc 33871914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 16341308 - 16341413
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||| | ||||||||||||| ||||||||| || |||||| ||||   |||||||||||||||| ||||||||||     
T  16341308 cctcttgtgtaaaaaacagggtaaggctacgtacaatacaccaa-aatggtgggccctcttcccggacctatcatatgcgggagctttggtgcaccgggc 16341406  T
Q  104 tgccctt 110  Q
    |||||||    
T  16341407 tgccctt 16341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 19426994 - 19426888
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||| |||||||| |||| |||||||||||||  |||||||||||| ||| | ||||| ||||||||| |||||| ||||||||||||    
T  19426994 cctcttgtgtaaaaaatagggtaagactgcgtacaatacaccaa--atggtgggaccc-ttctcggaccctgcatatgcgagagcttcagtgcaccgggt 19426898  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  19426897 tgcccttttt 19426888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 21566465 - 21566562
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||||||||||||||| | ||| |||| ||||||||||||| |||||| ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  21566465 cctcttgtgtaaaaaacagaggaagactgcgtacaatacaccaa-aatggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccggg 21566562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 31591215 - 31591108
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||  ||| |||||||||| |||||||||  ||  |||||||||||||||||| ||||  ||||||||||||||| ||||||||||    
T  31591215 caacctcttgtgtaaaa--cagagtaaggctgcgtacaatacaataa--atggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccg 31591120  T
Q  101 ggttgccctttt 112  Q
    ||||||||||||    
T  31591119 ggttgccctttt 31591108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 23419779 - 23419674
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||||||||||| |||| ||||||||||||  |||||||||||||||||| |||||  || | |||||| ||||||||||| ||||     
T  23419779 cctcttgtgtaaaaaacagggtaagactgcgtacaatacacca--aatggtgggaccccttcctagaccttgcgtgtgcgggggctttagtgcatcgggc 23419682  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  23419681 tgcccttt 23419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 28362250 - 28362155
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||||||  ||||||||||| ||||||||||||  ||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||    
T  28362250 cctcttgtgtaaaaaacttggtaaggctgcgtacaatacacca--aatggtgggaccccttcccagaccttgcatatgtgggagcttt-gtgcaccggg 28362155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 34626302 - 34626206
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||||| | |||||||||||  ||||||||| |||||||| ||||| || ||||||||||||||||| || |||||||||||||||    
T  34626302 aaaaacagggtaaggctgcgttcaatacaccaa--atggtgggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgcccttttt 34626206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18512560 - 18512455
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||| |||||||||||||  ||||||||||||| ||||||||||| |  |||||||||||||||||| ||||| || |||||||||||||| |||||| |    
T  18512560 caacatcttgtgtaaaaat-agggtaaggctgcgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcactg 18512464  T
Q  101 ggttgccct 109  Q
    |||||||||    
T  18512463 ggttgccct 18512455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 38262300 - 38262194
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||| | ||||| | |||||||||||||||||  ||| ||||||||||||||  || | || |||||||||||||||||||||||| ||    
T  38262300 ctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaa--atgatgggaccccttcccgaacactgcgtatgcgggagctttagtgcaccggatt 38262203  T
Q  105 gcccttttt 113  Q
    |||||||||    
T  38262202 gcccttttt 38262194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 3469272 - 3469176
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    ||||||||||||| || ||| ||||||||||||| ||||| |||||||||||| |||||| |  ||||||||||||||||||| | |||||||||||    
T  3469272 aaaaaacagggtacggttgcgtacaatacaccaaaaatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgcgctgggttgccctt 3469176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 18747520 - 18747621
Alignment:
Q  8 ttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgc 106  Q
    |||||||||||| |||||||||||||| || |||||||||||  ||||||||||||||||   |||| || ||||||||||||||||||||||||| |||    
T  18747520 ttgtgtaaaaaagcagggtaaggctgcgtataatacaccaat--tggtgggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgc 18747617  T
Q  107 cctt 110  Q
    ||||    
T  18747618 cctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 27889399 - 27889314
Alignment:
Q  26 aaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||| |||||||||||||  |||||||||||||||||| ||||| || |||||||||||||| || ||||||||||||||||||    
T  27889399 aaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgcccttttt 27889314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 35334915 - 35334818
Alignment:
Q  10 gtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    ||||||||||||||||||| |||  ||||||||||| |  |||||||||||||||||| ||||| || ||||| ||||||||||||||||||||| ||||    
T  35334915 gtgtaaaaaacagggtaagactgtgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggtttccct 35334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 40463908 - 40464012
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||||| | |||||||||||| || ||||||||||  |||||||||||||||| | ||||| || ||||||||||||| ||||||||| |||    
T  40463908 ctcttgtgtaaaaa-ctgggtaaggctgcgtataatacaccaa--atggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagtt 40464004  T
Q  105 gccctttt 112  Q
    ||||||||    
T  40464005 gccctttt 40464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 19265855 - 19265950
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||| ||||||||||||| |||||||||||||  |||||||||||||||||| ||||   |||||| |||||||||||||||||||| ||||||||||    
T  19265855 aaaaagagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccta-catatgtgggagctttagtgcaccgggctgcccttttt 19265950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 42476913 - 42477005
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||||| ||||||||||| |||||||||||||  ||||||||||||||||| || | | ||||||||||||||| ||||||||| ||||||||||    
T  42476913 aaaacaaggtaaggctgcgtacaatacaccaa--atggtgggaccccttcctaggctctgcatatgcgggagctctagtgcaccaggttgccctt 42477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 32233242 - 32233133
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||| ||||||||||| || || | ||||||||  |||||||||  |||||||| |||| ||||||| |||||||| |||||||||    
T  32233242 caacctcttgtgtaaaaa-cagggtaaggcagcgtatattacaccaa--atggtgggattccttcccaaaccctgcatatgagggagcttcagtgcaccg 32233146  T
Q  101 ggttgcccttttt 113  Q
    || ||||||||||    
T  32233145 ggctgcccttttt 32233133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 35787373 - 35787268
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| || ||||||| ||| |||||||||||||  |||| ||||||||||||| ||||  || ||||||||||||| | ||||||||||    
T  35787373 cctcttgtgtaaaaa-catggtaaggttgcgtacaatacaccaa--atggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgggt 35787277  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  35787276 tgccctttt 35787268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 38604557 - 38604654
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcaccggg 102  Q
    |||||||||||||| ||||||||||||||| ||||||||||||  ||||||| |||||||| || ||||| || |||||||||||||| |||||||||||    
T  38604557 cctcttgtgtaaaa-acagggtaaggctgcgtacaatacacca--aatggtgagacccctttccggaccctgcgtatgcgggagctttaagtgcaccggg 38604653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 11741835 - 11741927
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||| ||||||||||||| |||||||||||||  ||||||||| |||||||| ||  | ||| ||||||||||| ||||||||||||||||||||    
T  11741835 aaaatagggtaaggctgcgtacaatacaccaa--atggtgggatcccttcccggattctgcacatgcgggagctctagtgcaccgggttgccctt 11741927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 1408487 - 1408594
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||||||||  ||||||||| |||  |||||||||||||||||| ||||| || ||||| | | ||||||| |||||| |    
T  1408487 cctcttgtgtaaaaaacaaggtaaggctgtgtacaatacagcaa--atggtgggaccccttcccggaccctgcgtatgcagaatctttagttcaccggat 1408584  T
Q  104 tgcccttttt 113  Q
    |||| |||||    
T  1408585 tgcctttttt 1408594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 14732920 - 14732821
Alignment:
Q  11 tgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||  || |||||||  |||| |  |||||||||||||||||||||||| ||| ||||    
T  14732920 tgtaaaaaacagggtaaggctgcgt-caatacaccaaaaatggtgaaactccttcccgaaccctgtttatgcgggagctttagtgcaccggattgtcctt 14732822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 19266483 - 19266564
Alignment:
Q  7 cttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctt 90  Q
    |||| |||||||||||||||||||||| ||||||||||||  ||| |||||| |||||||| ||||| || |||||||||||||    
T  19266483 cttgcgtaaaaaacagggtaaggctgcgtacaatacacca--aattgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 45019010 - 45018923
Alignment:
Q  26 aaggctgcatacaatacaccaataa--tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||| ||||||| ||||| ||  |||||| |||||||||| ||||| || |||||||||||||||||||||| |||||||||||    
T  45019010 aaggctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgcccttt 45018923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 39123945 - 39124031
Alignment:
Q  26 aaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||| || |||||||||| ||||||||||||||||||| ||||| || |||| ||||||||| |||||||  | |||||||||    
T  39123945 aaggctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagctttggtgcaccaagctgccctttt 39124031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 36602535 - 36602584
Alignment:
Q  64 tcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  36602535 tcccagaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 36602584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 39093532 - 39093436
Alignment:
Q  17 aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||||||| |||  |||||||||||| |||| |||||| |||||||| || |  |||||||| | ||||||||||||||||| |||||||||||    
T  39093532 aaacagggtaagactgtgtacaatacacca-taatagtgggaacccttcccggaacttgcatatgcagaagctttagtgcaccgggctgcccttttta 39093436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 13792250 - 13792147
Alignment:
Q  10 gtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    |||||||||||  |||||| |||||||||||||||| | ||||| ||||||||||| |  |||| || ||||| |||||||| |||||||| | ||||||    
T  13792250 gtgtaaaaaacttggtaagactgcatacaatacaccca-aatggcgggaccccttctcgaaccctgcgtatgctggagcttttgtgcaccgagctgccct 13792152  T
Q  110 tttta 114  Q
    |||||    
T  13792151 tttta 13792147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 23231587 - 23231692
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| | | ||||||||||| || |||||||| |  ||| ||||||||||||||  |||| || ||||||| ||||||||||||||| ||    
T  23231587 cctcttgtgtaaaatataaggtaaggctgcgtataatacaccga--atgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagt 23231684  T
Q  104 tgcccttt 111  Q
    | ||||||    
T  23231685 ttcccttt 23231692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 33500556 - 33500645
Alignment:
Q  17 aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    |||||||||||| |||| ||| |||||| || ||||||||||||||||||| ||||| || ||||||||| ||| ||||  |||||||||||    
T  33500556 aaacagggtaagactgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgggatcttcagtg--ccgggttgccc 33500645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 47077917 - 47077853
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||| ||||  |||||||||||||| ||||||||||| ||||| |||||    
T  47077917 aatggtgggaccccttcccaaaccctacatatgcgggagctctagtgcaccggattgcctttttt 47077853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 48123589 - 48123508
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggag 87  Q
    ||||||||||||| ||||||||||  |||||||||||||||||  |||||||||||||||| |  ||||  |||||||||||||    
T  48123589 cctcttgtgtaaataacagggtaaaactgcatacaatacacca--aatggtgggacccctttctggaccatgcatatgcgggag 48123508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 2663038 - 2662946
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    |||||||||||||| |  |||||||||||| ||||||||||||  |||||||||| |||||  ||||||| ||||||||||||||| ||| |||||||    
T  2663038 cctcttgtgtaaaata--gggtaaggctgcgtacaatacacca--aatggtggga-cccttttcagaccctgcatatgcgggagctctagcgcaccgg 2662946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 28078227 - 28078151
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttta 92  Q
    |||||||||||||||| ||||| ||||||||||  |||||||||||||||||||  | || ||||||||| ||||||||    
T  28078227 aaaaaacagggtaaggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 28078151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 8149052 - 8148985
Alignment:
Q  3 acctcttgtgt-aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagac 71  Q
    ||||||||||| |||||| ||||||||| ||| |||||||||||||  ||||||||||||||||||||||    
T  8149052 acctcttgtgttaaaaaatagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccagac 8148985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 23619039 - 23618974
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    ||||||||||||||||| ||||||  || | ||| |||||||||||||| ||||||||||||||||    
T  23619039 aatggtgggaccccttcgcagaccttgcgtttgcaggagctttagtgcagcgggttgcccttttta 23618974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 35203470 - 35203531
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcc 66  Q
    ||||||||||||||||||| |||| |||| ||||||| ||||| |||||||||| |||||||    
T  35203470 ctcttgtgtaaaaaacaggataagactgcgtacaatataccaaaaatggtgggatcccttcc 35203531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 1424011 - 1423967
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatg 52  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  1424011 ttgtgtaaaaaacagggtaatgctgcatacactacaccaataatg 1423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 14099107 - 14099050
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttccc 67  Q
    |||||||||||||||| |||| |||| ||||||||||||  |||||||||||||||||||    
T  14099107 ttgtgtaaaaaacaggttaagactgcgtacaatacacca--aatggtgggaccccttccc 14099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 14409124 - 14409067
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttccc 67  Q
    |||||||||||||||| |||| |||| ||||||||||||  |||||||||||||||||||    
T  14409124 ttgtgtaaaaaacaggttaagactgcgtacaatacacca--aatggtgggaccccttccc 14409067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 45811920 - 45811983
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||| ||||| |||||||| || ||||| |||||||||||||| |||||||||||||||    
T  45811920 aatggtgggatccctttccagaccctgcttatgcaggagctttagtgca-cgggttgcccttttt 45811983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 7644986 - 7645047
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcc 66  Q
    |||||||||||||||||||||||||   || ||||||||||||| ||| ||||||||||||||    
T  7644986 cctcttgtgtaaaaaacagggtaagatagcgtacaatacaccaa-aattgtgggaccccttcc 7645047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12473331 - 12473377
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 47  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  12473331 caacctcttgtgtcaaaaacagggtaaggatgcgtacaatacaccaa 12473377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27697464 - 27697572
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtggg--accccttccc-agaccccgcatatgcgggagctttagtgca 97  Q
    |||||||||||||||||| ||||| |||||||  ||  ||||||||| |||||||||  |||| ||||| |||||| || ||||||||||||| | ||||    
T  27697464 caacctcttgtgtaaaaatcagggcaaggctgtgta--atacaccaa-aatggtgggggaccctttccccagaccctgcgtatgcgggagcttaaatgca 27697560  T
Q  98 ccgggttgccct 109  Q
    ||||| ||||||    
T  27697561 ccgggatgccct 27697572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 44171668 - 44171635
Alignment:
Q  80 tgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||||||||||||||||||||    
T  44171668 tgcgggagctttagtgcaccgggttgcccttttt 44171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 13805149 - 13805237
Alignment:
Q  22 gggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||  |||||||||||||  ||||||||||| |||||  ||||| || |||||||||||||| |||||| ||| | ||||||||    
T  13805149 gggtaaggctgtgtacaatacaccaa--atggtgggaccacttcctggaccctgcgtatgcgggagcttt-gtgcactgggctacccttttt 13805237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 17048914 - 17048859
Alignment:
Q  11 tgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttccc 67  Q
    ||||||||||||||||||| | | ||||||||||||| |||||||| ||||||||||    
T  17048914 tgtaaaaaacagggtaaggttacgtacaatacaccaa-aatggtggaaccccttccc 17048859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 23066029 - 23065924
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||| ||||||||||| ||| | ||| ||||||||||||   ||| ||||| ||||| ||  | || ||||||| ||||||||| ||||||||| ||    
T  23066029 ctcttgtttaaaaaacaggataaagttgcgtacaatacacca--tatgatgggatccctttccgaatcctgcatatgtgggagctttggtgcaccggatt 23065932  T
Q  105 gccctttt 112  Q
    ||||||||    
T  23065931 gccctttt 23065924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 25198799 - 25198863
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||| ||| ||||||||||||||  | |||| | |||||||||||||||||||||| ||||||    
T  25198799 aatggtaggatcccttcccagacccttcgtatgtgagagctttagtgcaccgggttgcacttttt 25198863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 25434050 - 25434144
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||| |||||||| ||||||  ||||||||| ||||||| ||||||  |||  ||||   ||||| || |||||||||||||||||||||||    
T  25434050 ctcttgtgcaaaaaacatggtaagagtgcatacaacacaccaa-aatggtatgacttcttcttggaccctgcgtatgcgggagctttagtgcaccg 25434144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 21139851 - 21139761
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcac 98  Q
    |||||||||||||| ||| |||||| || ||||| ||||||||  ||||||||||||||||||  || | |  ||||||| |||||||||||||    
T  21139851 ctcttgtgtaaaaa-cagagtaaggttggatacagtacaccaa--atggtgggaccccttcccgaactctgtgtatgcggaagctttagtgcac 21139761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 5180262 - 5180169
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgca 97  Q
    |||||||||| |||||||||||||| |||  ||||| ||||||| |||| | ||||||||| ||| | ||  | ||||| ||||||||| ||||    
T  5180262 cctcttgtgtcaaaaacagggtaagactgtgtacaacacaccaaaaatgattggacccctttccaaatcctacgtatgcaggagctttaatgca 5180169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 42495913 - 42495865
Alignment:
Q  60 cccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    |||||||| ||||| || ||||||||||||||||||||||  |||||||    
T  42495913 cccttcccggaccctgcgtatgcgggagctttagtgcaccccgttgccc 42495865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 33049064 - 33049187
Alignment:
Q  125 taaaaataatatttct-aactgaagttcaaaataagtaactcaagaccagttttttacatgtaactcttgcatatcctaagcactccataccttgaaccg 223  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  33049064 taaaaataatatttcttaagtgaagttcaaaataagtaactgaagaccagttttttacatgtaactcttgcatatcctaagcactccataccttgaacca 33049163  T
Q  224 cacactgtttcaaatgtctgtgct 247  Q
    ||||||||||||||||||| ||||    
T  33049164 cacactgtttcaaatgtctttgct 33049187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 16408708 - 16408599
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  16408708 cctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggt 16408609  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  16408608 tgcccttttt 16408599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 23501817 - 23501926
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  23501817 cctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggt 23501916  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  23501917 tgcccttttt 23501926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 21646994 - 21647098
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21646994 cctcttgtgtaaaaaatagggtaaggctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 21647093  T
Q  104 tgccc 108  Q
    |||||    
T  21647094 tgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 13256506 - 13256395
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  13256506 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggt 13256407  T
Q  104 tgccctttttag 115  Q
    ||||||||||||    
T  13256406 tgccctttttag 13256395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 20639764 - 20639656
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  20639764 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa-aatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 20639666  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  20639665 tgcccttttt 20639656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 20225119 - 20225211
Alignment:
Q  19 acagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 25629080 - 25629187
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||| ||||||||||||  |||||||||||||  |||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  25629080 ctcttgtgtaaaaaatagggtaaggctgtgtacaatacaccaa--atggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggtt 25629177  T
Q  105 gcccttttta 114  Q
    ||||||||||    
T  25629178 gcccttttta 25629187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 48327869 - 48327763
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||| || ||||||||||||||||    
T  48327869 ctcttgtgtaaaaaacagggtaagactgcatacaatacaccaataatggtgggacctcttcccgaaccccacatatgcggaagttttagtgcaccgggtt 48327770  T
Q  105 gcccttt 111  Q
     ||||||    
T  48327769 acccttt 48327763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 16911592 - 16911700
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || || ||||||||||||||  |||||||    
T  16911592 cctcttgtgtacaaatcagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggt 16911691  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  16911692 tgccctttt 16911700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20225011 - 20225117
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  20225011 caacctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccg 20225106  T
Q  101 ggttgcccttt 111  Q
    |||||||||||    
T  20225107 ggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 20405116 - 20405224
Alignment:
Q  4 cctcttgtgtaaaa-aacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||| |||||||||||  ||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||  |||    
T  20405116 cctcttgtgtaaaaaaacagggtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcattggg 20405215  T
Q  103 ttgcccttt 111  Q
    |||||||||    
T  20405216 ttgcccttt 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 44363237 - 44363130
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||| |||||||||||||||||| |||||| |||||  |||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  44363237 cctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 44363138  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  44363137 tgcccttt 44363130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 54175094 - 54175203
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccag-accccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||    
T  54175094 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa-aatggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccggg 54175191  T
Q  103 ttgcccttttta 114  Q
     |||||||||||    
T  54175192 ctgcccttttta 54175203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 47443987 - 47444094
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||||| ||||||| ||||||| ||||    
T  47443987 cctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcaggagcttcagtgcactgggt 47444084  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  47444085 tgcccttttt 47444094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 30639411 - 30639516
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||||| |||||||||||||| |||||||||||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  30639411 ctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggtt 30639507  T
Q  105 gcccttttt 113  Q
    |||||||||    
T  30639508 gcccttttt 30639516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 5648289 - 5648396
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||||||||| ||||||| ||||    
T  5648289 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggt 5648385  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  5648386 tgcccttttta 5648396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 29208001 - 29207900
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  29208001 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 29207906  T
Q  104 tgccct 109  Q
    ||||||    
T  29207905 tgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 30690272 - 30690176
Alignment:
Q  13 taaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| || |||||||||||||||||||||| || ||||||||    
T  30690272 taaaaaacagggtaaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgcccttt 30690176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9987942 - 9987832
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||| || ||||||||||||||||||||||||||  ||||||||||||||||||  ||||  |||||||||||||||||| |||||||    
T  9987942 caacctcttgtgtaaacaatagggtaaggctgcatacaatacacca--aatggtgggaccccttccttgaccttgcatatgcgggagctttaatgcaccg 9987845  T
Q  101 ggttgcccttttt 113  Q
    || |||| |||||    
T  9987844 ggctgcctttttt 9987832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 9832416 - 9832310
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||||| ||| || |||||||||||||    
T  9832416 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggt 9832321  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  9832320 tgcccttttta 9832310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 6430730 - 6430627
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||| |||||| ||||| || |||||||||||||||| |||||||||    
T  6430730 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggt 6430634  T
Q  104 tgccctt 110  Q
    |||||||    
T  6430633 tgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 8473713 - 8473621
Alignment:
Q  18 aacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccag-acccc-gcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||    
T  8473713 aacagggtaaggctgcatacaatacaccaa--atggtgggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 33836564 - 33836485
Alignment:
Q  34 atacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||||||||||||||    
T  33836564 atacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgcccttttt 33836485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 47528633 - 47528528
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| | ||||| ||||||| |||||||||||||    
T  47528633 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggt 47528538  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  47528537 tgcccttttt 47528528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 48598928 - 48598823
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||  |||||||| |||||| |||||||||||||    
T  48598928 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggt 48598833  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  48598832 tgcccttttt 48598823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 17043499 - 17043393
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||| |||||| ||     
T  17043499 cctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccagaccctgcatatgctggagcttta-tgcaccaggc 17043403  T
Q  104 tgcccttttt 113  Q
    ||||| ||||    
T  17043402 tgcccctttt 17043393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10660431 - 10660543
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcacc 99  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||| || || |||||||||||||| |||||| |    
T  10660431 caacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggagctttaagtgcatc 10660529  T
Q  100 gggttgcccttttt 113  Q
    ||||||||| ||||    
T  10660530 gggttgcccctttt 10660543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10874576 - 10874688
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcacc 99  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||| || || |||||||||||||| |||||| |    
T  10874576 caacctcttatgtaaaaaatagggtatggctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggagctttaagtgcatc 10874674  T
Q  100 gggttgcccttttt 113  Q
    ||||||||| ||||    
T  10874675 gggttgcccctttt 10874688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19027875 - 19027973
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||| | || |||| ||||||||||||||||||    
T  19027875 caacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaat--tggtgggacccctttccagactctgcgtatgtgggagctttagtgcaccg 19027972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 51865143 - 51865037
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||||||||| |||||||||||||  |||||||| ||||||||| ||||| || ||||||||||||||| ||||||||      
T  51865143 cctcttgtgtaaaaaacatggtaaggctgcgtacaatacaccaa--atggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggac 51865046  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  51865045 tgccctttt 51865037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 35567203 - 35567307
Alignment:
Q  7 cttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgc 106  Q
    ||||||||||||||||||||||||||  ||||| |||||||  ||||||||||||||||||  |||| || | ||||||||||||||||||||||| |||    
T  35567203 cttgtgtaaaaaacagggtaaggctgtgtacaacacaccaa--atggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgc 35567300  T
Q  107 ccttttt 113  Q
    |||||||    
T  35567301 ccttttt 35567307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 11054241 - 11054146
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||| |||| |||||||||||||  |||| || |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  11054241 aaaacagggtaagactgcgtacaatacaccaa--atggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 11054146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 30352681 - 30352578
Alignment:
Q  14 aaaaaacagggtaag----gctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    |||||||||||||||    ||||| ||||||||||||| ||||||||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||    
T  30352681 aaaaaacagggtaagtaaagctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccct 30352582  T
Q  110 tttt 113  Q
    ||||    
T  30352581 tttt 30352578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 14983864 - 14983970
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||| ||||||||| ||| |||||||||| ||  |||||||||||||||||| ||||| || |||||||||||||||||| |||  ||    
T  14983864 cctcttgtgtaaaaaatagggtaaggttgcctacaatacactaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccatgt 14983961  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  14983962 tgccctttt 14983970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 32484307 - 32484370
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgcccttttt 32484370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 40915859 - 40915962
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| || ||||||||||| |||||||||||||  ||||||||| |||||||| ||||| || ||||||||||||| |||||||||| |    
T  40915859 cctcttgtgtaaaaa-caaggtaaggctgcgtacaatacaccaa--atggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccggat 40915955  T
Q  104 tgccctt 110  Q
    |||||||    
T  40915956 tgccctt 40915962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 16494259 - 16494345
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| |  ||||||| |||||||||| ||||||    
T  16494259 aaaacagggtaaagctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcggaagctttagtgtaccggg 16494345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25463149 - 25463259
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||||| ||| |||| ||| ||||| |||||||  |||||||||||||||||| ||||| ||||||||||||||||| |||||||     
T  25463149 caacctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagcttt-gtgcacca 25463245  T
Q  101 ggttgcccttttta 114  Q
    || | |||||||||    
T  25463246 ggctacccttttta 25463259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 54730279 - 54730389
Alignment:
Q  4 cctcttgtgtaaaaaac-agggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||||||||||||  ||| ||||||||| || ||||||||||||||| ||| |||||||||| ||||| || |||||||||||||||||||||||      
T  54730279 cctcttgtgtaaaaaaataggataaggctgcgtataatacaccaataatgatggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccgaa 54730378  T
Q  103 ttgcccttttt 113  Q
    || ||||||||    
T  54730379 ttacccttttt 54730389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 37494878 - 37494972
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgca 97  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||| |  ||||| || ||||| ||||||||||||||    
T  37494878 caacctcttgtgtaaaaaacagggtaaggttgcatacaatatacca--aatggtgggacccctttcgggaccctgcgtatgcaggagctttagtgca 37494972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 38755973 - 38755908
Alignment:
Q  46 aataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  38755973 aataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 39029166 - 39029078
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttag 93  Q
    |||||||||||||||||||||||||||||  |||||||||| || |||||||||||| ||| || ||||| |||||||||||||||||||    
T  39029166 cctcttgtgtaaaaaacagggtaaggctgtgtacaatacacgaa-aatggtgggaccactttccggaccctgcatatgcgggagctttag 39029078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 20908733 - 20908634
Alignment:
Q  13 taaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||  |||| || |||||||||||||||||||||  || |||||||||    
T  20908733 taaaaaagaaggtaaggctgcgtacaatacaccaa-aatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctttt 20908635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 25343218 - 25343326
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||| ||| || || |||| | ||||||||| ||||| || |    
T  25343218 ctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaagggttggaccccttcctagatcctgcgtatgtgagagctttagagcacccggct 25343317  T
Q  105 gcccttttt 113  Q
    |||| ||||    
T  25343318 gcccctttt 25343326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 38786682 - 38786746
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  38786682 aatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 38786746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 7909384 - 7909281
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgc-gggagctttagtgcaccgggt 103  Q
    |||||||||||||| |||||||||| ||| ||||||||||||  |||||||||||||||||||  |||| || ||||| ||||||||||||||| |||||    
T  7909384 ctcttgtgtaaaaa-cagggtaaggttgcgtacaatacacca--aatggtgggaccccttcccgaaccctgcgtatgcggggagctttagtgcatcgggt 7909288  T
Q  104 tgccctt 110  Q
    |||||||    
T  7909287 tgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 30581575 - 30581481
Alignment:
Q  1 caacctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtg 95  Q
    ||||||||||||||||||| |||||||||| ||  ||||||||||||| ||||||||||||||||||| ||||| |||||||  ||||||||||||    
T  30581575 caacctcttgtgtaaaaaaacagggtaagggtgtgtacaatacaccaa-aatggtgggaccccttcccggaccctgcatatgtaggagctttagtg 30581481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 54967049 - 54967151
Alignment:
Q  2 aacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||  |||||||||||||||||||  ||||  |||||||||||||||| |||||||||    
T  54967049 aacctcttgtgtaaaaaacagggtaaggttgc-tacaatatacca--aatggtgggaccccttcccgtaccctacatatgcgggagcttt-gtgcaccgg 54967144  T
Q  102 gttgccc 108  Q
    | |||||    
T  54967145 gctgccc 54967151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 21489117 - 21489218
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||| ||||||||||| ||||| |||| |||||| |||||| |||||||||||||||||||  |||| || |||||||||||||| |||||| ||||    
T  21489117 cctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaa-aatggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcactgggt 21489215  T
Q  104 tgc 106  Q
    |||    
T  21489216 tgc 21489218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 5306768 - 5306658
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatg----cgggagctttagtgcacc 99  Q
    ||||||||||||||  |||||||||| ||| |||||||||||||  |||||||||||||||||| ||||| || ||||    ||||||||||| ||||||    
T  5306768 cctcttgtgtaaaat-cagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgtggacgggagctttaatgcacc 5306672  T
Q  100 gggttgcccttttt 113  Q
    ||||||||||||||    
T  5306671 gggttgcccttttt 5306658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 10277855 - 10277754
Alignment:
Q  11 tgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||| |||| ||| ||||||||| |||||||||||||  ||||||  |||||||||||||||| ||||||||||||| | ||||| ||||| ||||||||    
T  10277855 tgtataaaataggataaggctgcgtacaatacaccaa--atggtgaaaccccttcccagaccctgcatatgcgggagttctagtgaaccggattgccctt 10277758  T
Q  111 ttta 114  Q
    ||||    
T  10277757 ttta 10277754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 11394925 - 11394987
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||    
T  11394925 aatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11394987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 11404652 - 11404714
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||    
T  11404652 aatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 36816479 - 36816382
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||| | |||||| ||||||||||||| || |||||||| ||||||  ||||| |  |||||||||||||||||| |||||||||||||||||    
T  36816479 aaaaacagggcagggctgcgtacaatacaccaaaaa-ggtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgcccttttt 36816382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 56322984 - 56323038
Alignment:
Q  60 cccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  56322984 cccttcccggaccccggatatgcgggagctttagtgcaccgggttgcccttttta 56323038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 40553998 - 40553937
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  40553998 atggtgtgaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 40553937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 44718641 - 44718702
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||||||    
T  44718641 atggtgggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgcccttt 44718702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 28494224 - 28494288
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||||| || ||||||||||||||| |||||||||||| |||| |||||    
T  28494224 aatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgcctttttt 28494288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 32478893 - 32478792
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||| ||||||||| |||||||||||||     ||||||||||  |||||||||||||||||| ||||| || |||||||||||||| ||||||||    
T  32478893 caacctctagtgtaaaaa-cagggtaaggctg-----aatacaccaa--atggtgggaccccttcccggacccagcgtatgcgggagcttt-gtgcaccg 32478803  T
Q  101 ggttgcccttt 111  Q
    ||| |||||||    
T  32478802 ggtggcccttt 32478792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 39077899 - 39077794
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||| ||| ||||||| |||||  |||||| |||  ||| || ||||| ||||||||||||||| |||||||||||||    
T  39077899 cctcttgtgtaaaa--cagggtaaggttgcgtacaatataccaa--atggtgagacatctttccggaccctgcatatgcgggagctctagtgcaccgggt 39077804  T
Q  104 tgcccttttt 113  Q
    |||| |||||    
T  39077803 tgcctttttt 39077794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 2813169 - 2813263
Alignment:
Q  18 aacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 111  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||| |||||  ||   || |||||||||||||| |||||||||| |||||||||    
T  2813169 aacagggtaagactgcgtacaatacatcaataatggtgggaccctttcccgaacgatgcgtatgcgggagctttaagtgcaccggattgcccttt 2813263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 7038084 - 7038188
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttg 105  Q
    |||||||||||||| |||||||| || | ||||||||||||| ||||||||| | ||| ||| ||||| || ||| | ||||||||||||||| ||||||    
T  7038084 tcttgtgtaaaaaatagggtaagacttcgtacaatacaccaa-aatggtggggcacctacccggaccctgcgtatac-ggagctttagtgcactgggttg 7038181  T
Q  106 ccctttt 112  Q
    |||||||    
T  7038182 ccctttt 7038188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 19027986 - 19028048
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||| ||||||| |||||| | ||||||||||||||||||||||||| ||||||||||    
T  19027986 tggtgggactccttcccggaccccacttatgcgggagctttagtgcaccgggctgcccttttt 19028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 25388249 - 25388311
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||||||||| ||||| || |||||  |||||||||||||||||||||||||||    
T  25388249 aatggtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttt 25388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 49938668 - 49938611
Alignment:
Q  35 tacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttag 93  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  49938668 tacaatacaccaa-aatggtgggaccccttcccataccctgcatatgcgggagctttag 49938611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 35532077 - 35532129
Alignment:
Q  61 ccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 35532129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12711558 - 12711450
Alignment:
Q  1 caacctcttgtgtaaaaaac-agggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||| ||||||||||||||  |||||||| |||| |||||||||||||  |||| ||||||||||| ||||||  || ||||||| | ||||||||||||    
T  12711558 caacatcttgtgtaaaaaaatagggtaagactgcgtacaatacaccaa--atggcgggaccccttctcagacctagcgtatgcggaaactttagtgcacc 12711461  T
Q  100 gggttgccctt 110  Q
      |||||||||    
T  12711460 cagttgccctt 12711450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 49796839 - 49796911
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctt 90  Q
    |||||| ||||||||||| |||||||||||||  ||||||||||||||||||  |||| || |||||||||||||    
T  49796839 aaaacatggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 50555721 - 50555654
Alignment:
Q  46 aataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||| |||||||||| ||||| || ||||| |||| |||||||||||||| ||||||||||    
T  50555721 aataatggtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgcccttttt 50555654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 55766558 - 55766466
Alignment:
Q  17 aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||||||| ||||||||||  |  ||||||| ||||| |||| ||||  || |||||| |||||||||||||||||| ||||||||    
T  55766558 aaacagggtaaggctgcgtacaatacactga--atggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccgggatgcccttt 55766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 3580947 - 3580860
Alignment:
Q  2 aacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    ||||||||||||||||| || ||||||||||  | ||||||||||  |||| | |||||||||||| ||||| ||||||| |||||||||    
T  3580947 aacctcttgtgtaaaaaccatggtaaggctgtgtgcaatacacca--aatgctaggaccccttcccggaccctgcatatgtgggagcttt 3580860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 47482918 - 47482849
Alignment:
Q  43 accaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||| ||||||||||||||||||| ||||| || |||||||||||||| ||||| || | |||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgccctttt 47482849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 36589773 - 36589876
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||| ||||   ||| |||||||| ||||||||||||||||||   ||||    |||||||||||||| ||||||||||     
T  36589773 cctcttgtgtaaaaaacatggtaatgctgttgacagtacaccaa-aatggtgggaccccttcctgaaccctatgtatgcgggagctttggtgcaccgggc 36589871  T
Q  104 tgccc 108  Q
    |||||    
T  36589872 tgccc 36589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 8820578 - 8820629
Alignment:
Q  46 aataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgca 97  Q
    |||||||||||||||||||||||||||| || |||||| ||| |||||||||    
T  8820578 aataatggtgggaccccttcccagaccctgcgtatgcgagagttttagtgca 8820629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 30496409 - 30496333
Alignment:
Q  22 gggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||||||||||  ||||| ||||| ||||||| ||||  || ||||  |||||||||||||||||    
T  30496409 gggtaaggctgcatacaatacacca--aatggggggactccttcccggaccgtgcttatgatggagctttagtgcaccg 30496333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 35894563 - 35894505
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttccc 67  Q
    |||||||||||||| ||||||  ||| ||||||||||||| |||||||||||||||||||    
T  35894563 ttgtgtaaaaaacacggtaagtgtgcgtacaatacaccaa-aatggtgggaccccttccc 35894505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41018901 - 41018807
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcac 98  Q
    |||||||||||||||||   ||||||||||| | |||||||||||||  || ||||||||||||||||||||  || ||||  || ||||||||||||    
T  41018901 caacctcttgtgtaaaatt-agggtaaggctacgtacaatacaccaa--atagtgggaccccttcccagaccttgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 17079754 - 17079696
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcc 66  Q
    ||||||||| ||||||||||||||||||||||||||| | |  ||||||||||||| ||||    
T  17079754 tcttgtgtataaaacagggtaaggctgcatacaatacgcta--aatggtgggaccctttcc 17079696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 47441634 - 47441568
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccc 73  Q
    ||||| |||||||| |||||||||||||  ||||||||||||  |||||| |||||||||||| |||||    
T  47441634 ctcttttgtaaaaatcagggtaaggctgtgtacaatacacca--aatggttggaccccttcccggaccc 47441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51420601 - 51420646
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacacca 46  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||    
T  51420601 caacctcttgtgtagaaaacagggtaaggctgggtacaatacacca 51420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 14590878 - 14590922
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggacc 60  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||    
T  14590878 aaaaaacagggtaaggctgcatacaatacatca--aatggtgggacc 14590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 55830813 - 55830721
Alignment:
Q  17 aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||| ||||| ||||||||||  |  ||||||| ||||| |||| ||||  || |||||| ||||||||||||||| || ||||||||    
T  55830813 aaacagggtaatgctgcgtacaatacactga--atggtggaaccccatcccggaccttgcgtatgcgagagctttagtgcaccaggatgcccttt 55830721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 487243 - 487135
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaata-------atggtgggaccccttcccagaccccgcatatgcgggagctttag 93  Q
    |||||||||||||| |||||| ||||| ||||| |||||||||| || |       |||| ||||||||||||| ||  | ||  |||||||||||||||    
T  487243 caacctcttgtgtataaaacaaggtaaagctgcgtacaatacactaaaatggtgggatggcgggaccccttcccggattctgcgaatgcgggagctttag 487144  T
Q  94 tgcaccggg 102  Q
    |||||||||    
T  487143 tgcaccggg 487135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 7385581 - 7385499
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagc 88  Q
    |||| ||||||||||| ||||||||| ||  | |||||||||||  |||||||||||| ||||| ||||| |  |||||||||||    
T  7385581 cctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaa--atggtgggaccctttcccggaccctgtgtatgcgggagc 7385499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 21003410 - 21003469
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||||| |||| |||||||||||| || | |||||||||||| |||||||||| |||||||    
T  21003410 atggtgtgacctcttcccagaccctgcgtgtgcgggagcttt-gtgcaccgggctgccctt 21003469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 34257034 - 34256982
Alignment:
Q  59 ccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||| ||||||  ||| |||||||||||||||||||||||| ||| ||||    
T  34257034 ccccttctcagaccttgcacatgcgggagctttagtgcaccgggctgctcttt 34256982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 13730709 - 13730600
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13730709 cctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggt 13730610  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  13730609 tgcccttttt 13730600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 49013580 - 49013471
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  49013580 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggt 49013481  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  49013480 tgcccttttt 49013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 353450 - 353351
Alignment:
Q  10 gtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  353450 gtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 13628897 - 13628789
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  13628897 cctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 13628798  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  13628797 tgccctttt 13628789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40272920 - 40272810
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  40272920 caacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccg 40272823  T
Q  101 ggttgcccttttt 113  Q
    |||||||||||||    
T  40272822 ggttgcccttttt 40272810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 14987009 - 14987116
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||    
T  14987009 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagctttagtgcaccgggt 14987108  T
Q  104 tgcccttt 111  Q
    | ||||||    
T  14987109 ttcccttt 14987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 46421142 - 46421032
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcaccggg 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||     
T  46421142 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaagtgcaccggt 46421043  T
Q  103 ttgcccttttt 113  Q
    |||||||||||    
T  46421042 ttgcccttttt 46421032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 29366827 - 29366719
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||||||| ||||    
T  29366827 cctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggt 29366728  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  29366727 tgccctttt 29366719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 45786321 - 45786214
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||  |||| ||||||||||||||||||||    
T  45786321 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggt 45786222  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  45786221 tgcccttt 45786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 53996674 - 53996562
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| | || |||| ||||||||||||||||||    
T  53996674 caacctcttgtgtaaaaaacagggtaaggctgcttacaatacaccaa-aatggtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccg 53996576  T
Q  101 ggttgcccttttta 114  Q
    || |||||||||||    
T  53996575 ggctgcccttttta 53996562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 9607255 - 9607345
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagt 94  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9607255 cctcttgcgtaaaaaacagggtaaggctgcgtagaatacaccaataatgttgggaccccttcccagaccccgcatatgcgggagctttagt 9607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 12914140 - 12914034
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||||||||||||| || |||||||||||||  |||||| ||||||||||||||||| |||||||||||||||| | ||||||||||    
T  12914140 cctcttgtgtaaaaaacagggtaaggcggcgtacaatacaccaa--atggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggt 12914043  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  12914042 tgccctttt 12914034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 54484742 - 54484851
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||||| || ||||||||||| |||||||||||||  |||||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  54484742 cctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggg 54484839  T
Q  103 ttgcccttttta 114  Q
    ||||||||||||    
T  54484840 ttgcccttttta 54484851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 10795530 - 10795423
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||| || ||||||||||||| |||||||| |||    
T  10795530 cctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggt 10795431  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  10795430 tgcccttt 10795423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 516461 - 516571
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataa-tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||||||||||||||||||||||||||  |||||| ||||| || ||| ||||||||||||| ||||| || |||||||||||||||||||||||||    
T  516461 cctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccccgaccctgcgtatgcgggagctttagtgcaccggg 516560  T
Q  103 ttgcccttttt 113  Q
    |||||||||||    
T  516561 ttgcccttttt 516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 8247794 - 8247688
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcaccggg 102  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||| ||||||| |||    
T  8247794 cctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggagctttaagtgcactggg 8247695  T
Q  103 ttgccct 109  Q
    |||||||    
T  8247694 ttgccct 8247688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45139586 - 45139479
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||| |||| ||||||||    
T  45139586 caacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccaga-cctgcgtatgcgggaacttt-gtgcaccg 45139489  T
Q  101 ggttgccctt 110  Q
    || |||||||    
T  45139488 ggctgccctt 45139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45948946 - 45948848
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| | ||||| || |||||||||||||||||||||||    
T  45948946 caacctcttgtgtaaaaaatagggtaaggctgcatacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 45948849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 1217142 - 1217248
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  1217142 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 1217237  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  1217238 tgcccttttta 1217248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 54374454 - 54374343
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||     
T  54374454 caacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaa-aatggtgggaccccttcccggaccctgcatatgcgggagctttagttcacca 54374356  T
Q  101 ggttgcccttttt 113  Q
    || |||| |||||    
T  54374355 ggctgccattttt 54374343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 15797274 - 15797379
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  15797274 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggt 15797369  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  15797370 tgcccttttt 15797379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 34771457 - 34771361
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||||||||    
T  34771457 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttttta 34771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 31592901 - 31593004
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||| |||||||||||||    
T  31592901 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggactccttcccggaccctgcatatgcgggagctctagtgcaccgggt 31592996  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  31592997 tgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 39203568 - 39203671
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||| ||| |||||||||||||  |||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  39203568 cctcttgtgtaaaa--cagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggt 39203663  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  39203664 tgcccttt 39203671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5173828 - 5173717
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||| ||  |||||| ||||| ||||||||||| ||||||||| ||||||||| ||||  || |||||||||||||||||||||||    
T  5173828 caacctcttgtgtaaaaa-caaagtaaggttgcatgcaatacaccaaaaatggtggggccccttcccggaccttgcgtatgcgggagctttagtgcaccg 5173730  T
Q  101 ggttgcccttttt 113  Q
    |||||||||||||    
T  5173729 ggttgcccttttt 5173717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 22123010 - 22122918
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  22123010 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 22609818 - 22609921
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||||| ||||  || ||||||||||||| ||||||||||||    
T  22609818 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggt 22609914  T
Q  104 tgccctt 110  Q
    |||||||    
T  22609915 tgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 34420749 - 34420640
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||  || |||| ||||||||||||||||  ||     
T  34420749 cctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaa-aatggtgggaccccttcccggaccttgcgtatgtgggagctttagtgcacatggc 34420651  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  34420650 tgcccttttta 34420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 26869769 - 26869865
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||| || ||||  || |||||||||||||| |||||||||||||||||||||    
T  26869769 aaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgcccttttt 26869865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 26573179 - 26573282
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||  |||||||||||| |||| ||||| || |||||| ||||||||||||||| ||     
T  26573179 cctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaat--tggtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggc 26573276  T
Q  104 tgccct 109  Q
    ||||||    
T  26573277 tgccct 26573282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 6411926 - 6411833
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  ||| |||||||||||||||||||  || |||||||||||||||||||||||    
T  6411926 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atgatgggaccccttcccagaccttgcgtatgcgggagctttagtgcaccg 6411833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 16735503 - 16735598
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||| | || ||||||| ||||| ||||||| |||||||||||||    
T  16735503 aaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttt 16735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 52926304 - 52926217
Alignment:
Q  24 gtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||| |||||||||||||  |||||||||| ||||||| ||||| || |||||||||||||||| |||||||||||||||||||    
T  52926304 gtaaggctgcgtacaatacaccaa--atggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgcccttttt 52926217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 25944521 - 25944629
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||| ||||||||||| ||| |||||||  ||||||||||||| ||||||||||||||||||| ||||| || |||| ||||||||||| ||||| ||     
T  25944521 cctctcgtgtaaaaaactgggcaaggctgagtacaatacaccaa-aatggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcaccaggc 25944619  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  25944620 tgcccttttt 25944629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 7943044 - 7943149
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttg 105  Q
    |||||| |||||||||||||||| |||| ||||||||| |||  ||||||||| ||||| |||||||  || ||||||||||||||||||||| ||||||    
T  7943044 tcttgtctaaaaaacagggtaagactgcgtacaatacatcaa--atggtgggatccctttccagaccatgcgtatgcgggagctttagtgcactgggttg 7943141  T
Q  106 cccttttt 113  Q
    || |||||    
T  7943142 cctttttt 7943149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 24851363 - 24851299
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||    
T  24851363 aatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgcccttttt 24851299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 33926135 - 33926224
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtg 95  Q
    ||||||||||||||| |||||||||||||  |||||||||||| |||||||||||||||||||  ||||| ||||||||| |||||||||||    
T  33926135 cctcttgtgtaaaaa-cagggtaaggctgtgtacaatacacca-taatggtgggaccccttcctggaccctgcatatgcgagagctttagtg 33926224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 25517276 - 25517169
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||||| || | || |||||| |||||||||| ||  |||||||||||||||||| || || || ||||| |||||||||||||||||||    
T  25517276 cctcttgtgtaaaaaaacaagatatggctgcgtacaatacacaaa--atggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccggg 25517179  T
Q  103 ttgccctttt 112  Q
    ||||||||||    
T  25517178 ttgccctttt 25517169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 30452892 - 30452953
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30452953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 9276316 - 9276419
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||| ||||| ||||| || ||||||||| ||||| ||| | ||||    
T  9276316 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacacca--aatggt-ggaccctttcccggaccctgcgtatgcgggaacttta-tgcgcagggt 9276411  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  9276412 tgcccttt 9276419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 19731054 - 19731155
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||||| ||| |||||||||||  || ||||||||||| ||||||||| | |  ||||| |||||||||||||||||||     
T  19731054 cctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacc--tattggtgggaccctttcccagactctgtgtatgcaggagctttagtgcaccgggc 19731151  T
Q  104 tgcc 107  Q
    ||||    
T  19731152 tgcc 19731155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 54032667 - 54032570
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||            ||||| || |||||||||||||||||||||||    
T  54032667 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacacc--gaatggtgg------------gaccctgcgtatgcgggagctttagtgcaccg 54032582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 829551 - 829452
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||| |||| ||||  |||| | ||| ||||||||||||| |||||||||||||||||||  |||| || ||||| |||||||||||||||||    
T  829551 caacctcttgtctaaagaacatagtaaagttgcgtacaatacaccaa-aatggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccg 829453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 55401228 - 55401330
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||| |||| |||| || |||||||||| ||||||||||||||||| | ||||   | ||||||||||||||  |||||||||     
T  55401228 cctcttgtgtaaaaaacaggttaagactgcgtataatacaccaa-aatggtgggaccccttctcggaccttccgtatgcgggagcttttttgcaccgggc 55401326  T
Q  104 tgcc 107  Q
    ||||    
T  55401327 tgcc 55401330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 44403661 - 44403552
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| ||| |||||||||||  | |||||  ||| ||||||||||||||||||| |||||  | ||||| | |||||||||||||||||     
T  44403661 cctcttgtgtaaaagacaaggtaaggctgcggagaataccacaa-aatggtgggaccccttcccggaccctacgtatgctgaagctttagtgcaccgggc 44403563  T
Q  104 tgcccttttta 114  Q
    |||| ||||||    
T  44403562 tgcctttttta 44403552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 47624094 - 47624160
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccc 73  Q
    |||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  47624094 cctcttgtgtaaaa-acagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccc 47624160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 4495765 - 4495674
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||            ||||| || ||||||||||||||||||||||||||||||    
T  4495765 ttgtgtaaaaaacagggtaaggctgcgtacaatacacca--aatggtgg------------gaccctgcgtatgcgggagctttagtgcaccgggttgcc 4495680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 10484671 - 10484615
Alignment:
Q  56 ggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||||||  ||||| || |||||||||||||||||||||||||||||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10484615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 24577930 - 24577994
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||| || ||||||||||| |||||| |||||||| ||||||||||| |||||||||||    
T  24577930 aatggtgggatcctttcccagaccctgcatatacgggagctctagtgcaccggattgcccttttt 24577994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 24578020 - 24578084
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||| | |||||||||||  ||||||||||| || |||||||||||||||||||||||    
T  24578020 aatggtgggactctttcccagaccctacatatgcgggaactctagtgcaccgggttgcccttttt 24578084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 26292384 - 26292490
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  ||||||||| | || ||| |||||||||  ||| ||||| ||||||||  |||| |||||||||||| || |||||||||||||    
T  26292384 cctcttgtgtaaaa--cagggtaagaccgcgtacgatacaccaa--atgatgggatcccttcccgaaccctgcatatgcgggaactctagtgcaccgggt 26292479  T
Q  104 tgcccttttta 114  Q
    || ||||||||    
T  26292480 tgtccttttta 26292490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 30928252 - 30928167
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    |||||||||||||||||| ||||||| ||  || |||||||||||  ||| ||||||||||||| ||||| ||||||| |||||||||    
T  30928252 cctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacaccaat--tggcgggaccccttcccggaccctgcatatgtgggagcttt 30928167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 35417999 - 35418063
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||| |||| ||||| ||||    
T  35417999 aatggtgggaccccttcccggaccccgcaaatgcgagagctttagtgcatcgggctgcccatttt 35418063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 8410966 - 8410887
Alignment:
Q  10 gtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    ||||||||||||||||||||||||  |||||||||||  | |||||||||| |||| ||||||| ||||| |||| ||||||    
T  8410966 gtgtaaaaaacagggtaaggctgctcacaatacacca--actggtgggacctcttctcagaccctgcataggcggaagcttt 8410887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 12525459 - 12525566
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| ||||||||||||||  |   |||||||| ||||||||||| |||||| |||||| |  ||| ||||||||| | |||||| |||    
T  12525459 cctcttgtgtaaaaatcagggtaaggctgcgaag--tacaccaaaaatggtgggacaccttcctagaccctgtgtatacgggagcttcactgcaccaggt 12525556  T
Q  104 tgcccttttt 113  Q
    ||| ||||||    
T  12525557 tgctcttttt 12525566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 47624208 - 47624258
Alignment:
Q  63 ttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 47624258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 50625058 - 50624951
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||| |||| |||||||||  || |||||||||||| |  ||||||||| ||||||  | ||| || || | ||||||||||||||||||||     
T  50625058 cctcttgtgtataaaaaagggtaaggtagcgtacaatacaccatt--tggtgggacgccttcctgggccctgcgtaagtgggagctttagtgcaccgggc 50624961  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  50624960 tgcccttttt 50624951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 31904955 - 31904857
Alignment:
Q  11 tgtaaaaaacagggtaaggctgcatacaatacaccaataatggtggga-ccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    |||||||||||||||| | |||| ||||||||||||  |||||||||| |||||||||||| |   | | |||||||||||||||||||| || ||||||    
T  31904955 tgtaaaaaacagggtatgactgcgtacaatacacca--aatggtgggacccccttcccagatcttacgtgtgcgggagctttagtgcaccaggctgccct 31904858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 19751630 - 19751731
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| || ||||||| ||| |||||||||||  || ||||||||||| |||||||||   |  |||||  ||||||||||||||||||     
T  19751630 cctcttgtgtaaaaatcaaggtaaggttgcgtacaatacacc--tattggtgggaccctttcccagactttgtgtatgcatgagctttagtgcaccgggc 19751727  T
Q  104 tgcc 107  Q
    ||||    
T  19751728 tgcc 19751731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 33235583 - 33235687
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||||| ||||||||| |||  |||||||||| ||  |||||||||||||| | ||||||   | ||||||| |||||||||||||| ||    
T  33235583 cctcttgtgtaaaaaaacagggtaagactgtgtacaatacactaa--atggtgggacccct-cgcagaccttacgtatgcggaagctttagtgcaccagg 33235679  T
Q  103 ttgccctt 110  Q
    ||||||||    
T  33235680 ttgccctt 33235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 40390365 - 40390400
Alignment:
Q  78 tatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||||||||||||||||||||||    
T  40390365 tatgcgggagctttagtgcaccgggttgcccttttt 40390400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 40968613 - 40968676
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||| |||||||||| ||||||  |||||||||||||||||||||| || | |||||||||    
T  40968613 aatggtgagaccccttcctagaccctacatatgcgggagctttagtgcatcgagctgccctttt 40968676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 52428582 - 52428539
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 47  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  52428582 cctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaa 52428539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 43114975 - 43114882
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaagg-ctgcatacaatacaccaataatggtgggaccccttcccagacccc-gcatatgcgggagctttagtgca 97  Q
    |||||||||||||||| |||||||||| || | |||||||||||||  |||||||||||| ||||  |||||| || ||||||||||||||||||||    
T  43114975 cctcttgtgtaaaaaaacagggtaagggctacctacaatacaccaa--atggtgggaccc-ttcctggacccctgcgtatgcgggagctttagtgca 43114882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 45620934 - 45620889
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaat 48  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||    
T  45620934 cctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaat 45620889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 6242327 - 6242283
Alignment:
Q  69 gaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||    
T  6242327 gaccctgcatatgcaggagctctagtgcaccgggttgcccttttt 6242283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 43956514 - 43956470
Alignment:
Q  69 gaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||    
T  43956514 gacccagcgtatgcgggagctttagtgcaccgggctgcccttttt 43956470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 31831301 - 31831343
Alignment:
Q  69 gaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||    
T  31831301 gaccctgcatatgcgggtgctctagtgcaccgggttgcccttt 31831343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 10696272 - 10696211
Alignment:
Q  52 ggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||||| || | | ||||||| |||||||||  || ||||||||||    
T  10696272 ggtgggaccccttcccagaccctgcgtctacgggagcattagtgcactaggctgcccttttt 10696211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 14266405 - 14266372
Alignment:
Q  78 tatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||||||||||| ||||||||||||    
T  14266405 tatgcgggagctttagtgcactgggttgcccttt 14266372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 23871490 - 23871523
Alignment:
Q  78 tatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||| ||||||||||||||||||||||||    
T  23871490 tatgcgggaactttagtgcaccgggttgcccttt 23871523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 16130329 - 16130432
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttg 105  Q
    |||| |||||||| |||| |||||||||  |||||||||||| |||||||||||||  ||| |||||  || ||  | ||||||||||||||  ||| ||    
T  16130329 tcttctgtaaaaagcaggataaggctgcgaacaatacaccaa-aatggtgggaccctgtcctagaccttgcgtacacaggagctttagtgcattgggctg 16130427  T
Q  106 ccctt 110  Q
    |||||    
T  16130428 ccctt 16130432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21875062 - 21875106
Alignment:
Q  1 caacctcttgtgt-aaaaaacagggtaaggctgcatacaatacac 44  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||||    
T  21875062 caacctcttgtgttaaaaaagagggtaaggctgcgtacaatacac 21875106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 31831251 - 31831292
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 47  Q
    |||||||||||||| |  ||||||||||||||||||||||||||    
T  31831251 cctcttgtgtaaaata--gggtaaggctgcatacaatacaccaa 31831292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 46170029 - 46169981
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgca 97  Q
    |||||| |||||||||||| ||||| ||||||| |||||||| ||||||    
T  46170029 aatggtaggaccccttcccggaccctgcatatgtgggagcttcagtgca 46169981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 9e-48; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7136637 - 7136525
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7136637 caacctcttgtgtaaaaaccagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccg 7136538  T
Q  101 ggttgcccttttt 113  Q
    |||| ||||||||    
T  7136537 ggttacccttttt 7136525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 20869954 - 20870062
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20869954 ctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtgcaccgggtt 20870053  T
Q  105 gcccttttt 113  Q
    |||||||||    
T  20870054 gcccttttt 20870062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 6760852 - 6760961
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  6760852 cctcttgtgtaaaaaacagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggt 6760951  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  6760952 tgcccttttt 6760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 26954162 - 26954271
Alignment:
Q  4 cctcttgtgtaaaa-aacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  26954162 cctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactggg 26954261  T
Q  103 ttgccctttt 112  Q
    ||||||||||    
T  26954262 ttgccctttt 26954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 39461101 - 39460993
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||    
T  39461101 cctcttgtgtaaaaaacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 39461002  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  39461001 tgccctttt 39460993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 16225049 - 16225156
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  16225049 cctcttatgtaaaaaacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccgggt 16225148  T
Q  104 tgcccttt 111  Q
    || |||||    
T  16225149 tgtccttt 16225156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 25250556 - 25250662
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  25250556 ttgtgtaaaaaatagggtatggctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgcc 25250655  T
Q  108 cttttta 114  Q
    |||||||    
T  25250656 cttttta 25250662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 44530176 - 44530285
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  ||||| || |||||||||||||||||||||||    
T  44530176 caacctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccg 44530273  T
Q  101 ggttgccctttt 112  Q
    ||||| ||||||    
T  44530274 ggttgacctttt 44530285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 28817731 - 28817623
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||| |  |||||||||||||||||| ||||| || |||||||||||||||||||| |||||    
T  28817731 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccca--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggt 28817634  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  28817633 tgcccttttta 28817623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12625916 - 12626026
Alignment:
Q  1 caacctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||| |||| ||||| || ||||||||||||||||||||||    
T  12625916 caacctcttgtgtaaaaaaacagggtaagactgcatacaatacaccaa--atggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcacc 12626013  T
Q  100 gggttgccctttt 112  Q
    |||||||||||||    
T  12626014 gggttgccctttt 12626026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 35261710 - 35261816
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||||  ||||| || |||||||||||||||||||||||||||    
T  35261710 ctcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggtt 35261807  T
Q  105 gcccttttt 113  Q
    |||||||||    
T  35261808 gcccttttt 35261816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 36720826 - 36720932
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||| |||||||||||||| |||    
T  36720826 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggt 36720923  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  36720924 tgccctttt 36720932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 8897872 - 8897762
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||| ||||||||||||| ||||||||||| | |||||||||||||  |||||||||||||||||| ||||| |||||||||||||||||| ||||||     
T  8897872 caaccgcttgtgtaaaaaatagggtaaggctacgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctttactgcaccc 8897775  T
Q  101 ggttgcccttttt 113  Q
    |||||||||||||    
T  8897774 ggttgcccttttt 8897762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 29521790 - 29521685
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||| ||||||||||||||||||||| |||||||||||||  ||||||||| ||| |||||||||| || ||||||||||||||||||||||||||    
T  29521790 cctcttgtttaaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccgggt 29521693  T
Q  104 tgcccttt 111  Q
    ||| ||||    
T  29521692 tgctcttt 29521685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 12670353 - 12670248
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  12670353 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 12670258  T
Q  104 tgcccttttt 113  Q
    | ||||||||    
T  12670257 tacccttttt 12670248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 20284166 - 20284075
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttg 105  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||||    
T  20284166 aaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 21070794 - 21070703
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttg 105  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||||    
T  21070794 aaaaaaaagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8484046 - 8483947
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||| |||||||||| || |||||||||||||||| ||||||    
T  8484046 caacctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaat--tggtgggaccccatcccagaccctgcgtatgcgggagctttagggcaccg 8483949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44781614 - 44781517
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcac 98  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||| |||| ||||||||| |||||||||| || |||||||||||||||||||||    
T  44781614 caacctcttgtgtaaaagacagggtaaggctgtgtacaatacaccaaaaatgttgggaccccgtcccagaccctgcgtatgcgggagctttagtgcac 44781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 13160732 - 13160836
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||||||||| ||||| ||||||    
T  13160732 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggt 13160828  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  13160829 tgcccttt 13160836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 30454200 - 30454095
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  || ||||||||||| ||| |||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  30454200 cctcttgtgtaaaa--caaggtaaggctgcgtacgatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 30454105  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  30454104 tgcccttttt 30454095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 45071295 - 45071398
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||||| ||||  || ||||||||||||| ||||||||||||    
T  45071295 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggt 45071391  T
Q  104 tgccctt 110  Q
    |||||||    
T  45071392 tgccctt 45071398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 29877128 - 29877227
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||||||| |||||||||| || ||||    
T  29877128 ttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgcc 29877225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 10857858 - 10857967
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||  |||||||||| |||||  ||||  || |||||||||||||||||||||||||    
T  10857858 cctcttgtgtaaaaaaacagggtaaggctgcgcacaatacaccaat--tggtgggaccacttcctggaccttgcgtatgcgggagctttagtgcaccggg 10857955  T
Q  103 ttgcccttttta 114  Q
    ||||||||||||    
T  10857956 ttgcccttttta 10857967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 5135394 - 5135287
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||| ||||||||||||  ||||||||||||  ||||||||||||||||||| ||||| || ||||| |||||||| ||||||||||     
T  5135394 cctcttgtgtaaaaaagagggtaaggctgtgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcaggagcttt-gtgcaccgggc 5135298  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  5135297 tgcccttttta 5135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 2626562 - 2626657
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||||| |||| |||||||||||||  ||| |||||||||||||||||||| |||||||||||||||| |||||||| | |||||||||    
T  2626562 aaaaaacagggtaagactgcgtacaatacaccaa--atgatgggaccccttcccagaccctgcatatgcgggagcttcagtgcaccagattgcccttt 2626657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 17250982 - 17250879
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| |||||  |||| || ||||  |||||||||||||| |||||    
T  17250982 cctcttgtgtaaaaaacaggttaaggcagcgtacaatacaccaataatggtgggaccctttcccgaaccctgcgtatgaaggagctttagtgca-cgggt 17250884  T
Q  104 tgccc 108  Q
    |||||    
T  17250883 tgccc 17250879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 17823606 - 17823711
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||| |||| |||| || ||||||||||  ||||||| ||||||||||  |||| |||||||| ||||||||||||||||||||    
T  17823606 cctcttgtgtaaaaaccaggataagactgcgtaaaatacaccaa--atggtggaaccccttcccgaaccctgcatatgcaggagctttagtgcaccgggt 17823703  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  17823704 tgcccttt 17823711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 16013515 - 16013594
Alignment:
Q  35 tacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||||| || ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  16013515 tacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccgggttgtccttttta 16013594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 19729382 - 19729476
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||||||||||||  |||||||||||||  |||||||||||||||||| ||||| |||||| |||||||| |||||||| || ||||||||||    
T  19729382 aaaacagggtaaggctgtgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatacgggagctctagtgcactggattgccctttt 19729476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 44742619 - 44742515
Alignment:
Q  9 tgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||   |||||  |  |||||||||| ||||||||||||| |||||    
T  44742619 tgtgtaaaaaacagggtaaggctgcgtacaatacaccaa-aatggtgggaccccttcttggaccctacggatgcgggagcattagtgcaccggggtgccc 44742521  T
Q  109 ttttta 114  Q
     |||||    
T  44742520 ctttta 44742515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 26102577 - 26102654
Alignment:
Q  34 atacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||  |||||||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||    
T  26102577 atacaatacaccaa--atggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgcccttttt 26102654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 5689661 - 5689761
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||||||||  |||  || |||| ||||||||||||||||||| |    
T  5689661 cctcttgtgtaaaaagcagggtaaggctgcgtacaatacacca--aatggtggaaccccttcccgaaccatgcgtatgtgggagctttagtgcaccggtt 5689758  T
Q  104 tgc 106  Q
    |||    
T  5689759 tgc 5689761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 43942354 - 43942421
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagac 71  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  43942354 cctcttatgtcaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagac 43942421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31457200 - 31457308
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||  |||  |||||||| ||||||||| |||  ||||| ||||||||||||| |||| || |||||||||||| ||||||||||    
T  31457200 caacctcttgtgtaaaaat-aggaaaaggctgcgtacaatacatcaa--atggtaggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccg 31457296  T
Q  101 ggttgccctttt 112  Q
    | ||||||||||    
T  31457297 gattgccctttt 31457308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 18164864 - 18164758
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||  | | || ||||  ||||| ||||| || ||||||||||||||||||||||||||    
T  18164864 cctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaa--aggatgtgaccatttcccggaccctgcgtatgcgggagctttagtgcaccgggt 18164768  T
Q  104 tgcccttttt 113  Q
    |||| |||||    
T  18164767 tgccattttt 18164758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24365165 - 24365071
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||  |||||||||||||||||| ||||| || |||| ||||||||| ||||||||    
T  24365165 cctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgtgggagcttt-gtgcaccg 24365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22598184 - 22598279
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||  ||||| ||||| ||||| ||||  || ||||||||| ||||||||||||    
T  22598184 caacctcttgtgtaaaaaacagggtaaggctatgtacaatacaccaat--tggtgagaccctttcccggaccttgcgtatgcggga-ctttagtgcacc 22598279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 28407476 - 28407538
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||||||||| |||||  | ||||||||||||||| ||||||||||||||||||    
T  28407476 aatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcccttt 28407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 389673 - 389770
Alignment:
Q  4 cctcttgtgt--aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||  |||||||||||||||| ||| ||||||||||||  |||| ||||| ||||| || ||||| || |||||| |||||||||||||||||    
T  389673 cctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacacca--aatgatgggatccctttcctgaccctgcgtatgcgagagctttagtgcaccgg 389770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 23000323 - 23000228
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| || ||||||| | |||||||||||||||  |||||||||||||||||| ||         ||||||||||||||||||||||||    
T  23000323 cctcttgtgtaaaaa-cacggtaaggttccatacaatacaccaa--atggtgggaccccttcccgga---------tgcgggagctttagtgcaccgggt 23000236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 33866983 - 33867087
Alignment:
Q  8 ttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgc 106  Q
    |||||||||||| ||||||||| ||||||||||||||  || |||||||  ||  ||||||  |||| || ||||| | |||||||||||||||||||||    
T  33866983 ttgtgtaaaaaagcagggtaagactgcatacaatacataaaaaatggtgacacttcttcccgaaccctgcgtatgcagaagctttagtgcaccgggttgc 33867082  T
Q  107 ccttt 111  Q
    |||||    
T  33867083 ccttt 33867087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 27468141 - 27468090
Alignment:
Q  62 cttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 27468090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 27507985 - 27508044
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||||||||||||||||  |||| || |||||||||||||||||||||||||||| ||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccgggttgtcctt 27508044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 35107373 - 35107310
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||||| ||| | |  ||||||| |||||||||||||||||||||||||||    
T  35107373 aatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgccctttt 35107310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 26457776 - 26457864
Alignment:
Q  21 agggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||| ||||||||||||||  |||||||||||||  || ||||  || |||| |||||||||||||||||||||| || |||||    
T  26457776 agggtaaggctgcgtacaatacaccaat--tggtgggacccct--cctgaccttgcgtatgagggagctttagtgcaccgggtttcctttttt 26457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 20869601 - 20869523
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagc 88  Q
    ||||||||||||||  |||||||||||||  |||||||||||||    |||| ||||||||||| ||||| ||||||||||||||    
T  20869601 cctcttgtgtaaaa--cagggtaaggctgtgtacaatacaccaa----ggtgagaccccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 14018073 - 14017989
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctt 90  Q
    ||||||||||||||||||||| || |||| |||||||||| || | |||||||||| |||||  ||||| ||| |||||| |||||    
T  14018073 ctcttgtgtaaaaaacagggtgagactgcgtacaatacactaa-attggtgggaccacttcctggaccctgcagatgcggtagctt 14017989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35105950 - 35106014
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcc 66  Q
    ||||||||||||||||| | || |||||||||| ||||||||||| | |||||||||||| |||||    
T  35105950 caacctcttgtgtaaaagagagtgtaaggctgcgtacaatacacc-agaatggtgggacctcttcc 35106014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 36486627 - 36486567
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    ||||||||||| |||||| ||||  || ||||| ||||||||||||| |||||||||||||    
T  36486627 atggtgggacctcttcccggaccttgcgtatgcaggagctttagtgccccgggttgccctt 36486567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 23286379 - 23286337
Alignment:
Q  69 gaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||    
T  23286379 gaccctgcatatgcgggagctctagtgcaccgggctgcccttt 23286337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 42083800 - 42083699
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    ||||||||||||  ||| |||||||| |||| || ||||| |||||||||||||||||||  |||| |  || | |||||||||||||||  ||| ||||    
T  42083800 ttgtgtaaaaaatggggcaaggctgcgtacagtataccaa-aatggtgggaccccttcccgaaccctgtgtacgtgggagctttagtgcattgggctgcc 42083702  T
Q  108 ctt 110  Q
    |||    
T  42083701 ctt 42083699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 2351780 - 2351719
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||| |||| |||||| ||||  |||||||||||||||||||| |||| |||||||    
T  2351780 aatggtgggaccc-ttcctagaccctgcat--gcgggagctttagtgcaccgagttgtccttttt 2351719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 18595918 - 18595975
Alignment:
Q  56 ggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||| ||||| |  |||||||||| ||||||||| ||||||||| |||||    
T  18595918 ggaccccttcccggaccctgtgtatgcgggagttttagtgcatcgggttgcctttttt 18595975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 36918156 - 36918197
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 47  Q
    |||| ||||||||||||||||||||||  |||||||||||||    
T  36918156 tcttatgtaaaaaacagggtaaggctgtgtacaatacaccaa 36918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 9e-48; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 4619211 - 4619103
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  4619211 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggt 4619112  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  4619111 tgccctttt 4619103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 13801874 - 13801767
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  13801874 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggt 13801775  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  13801774 tgcccttt 13801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 38879611 - 38879719
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  38879611 cctcttgtataaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 38879710  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  38879711 tgccctttt 38879719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 20135634 - 20135740
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  20135634 cctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggt 20135733  T
Q  104 tgccctt 110  Q
    |||||||    
T  20135734 tgccctt 20135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12006438 - 12006329
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  12006438 caacctcttatgtaaaaaatagggtaaggctccatacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgcaccg 12006339  T
Q  101 ggttgccctt 110  Q
     |||||||||    
T  12006338 tgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 41014349 - 41014454
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  41014349 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggt 41014445  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  41014446 tgccctttt 41014454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 43334243 - 43334342
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||  |||||||||||||||||||||||||||||||||||    
T  43334243 aaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgc-gatgcgggagctttagtgcaccgggttgcccttttt 43334341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 27328783 - 27328890
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| || ||||||||||||||| |||| ||| ||    
T  27328783 ctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggagctttaatgcatcggatt 27328882  T
Q  105 gccctttt 112  Q
    ||| ||||    
T  27328883 gccttttt 27328890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 24448924 - 24449027
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||| ||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||    
T  24448924 ttgtgtaaaaaatagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgcc 24449021  T
Q  108 cttttt 113  Q
    ||||||    
T  24449022 cttttt 24449027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 32703454 - 32703558
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  32703454 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 32703549  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  32703550 tgccctttt 32703558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 8170077 - 8169981
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||    
T  8170077 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgcccttttta 8169981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 16880752 - 16880647
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||| |||||| ||||  || ||||||||||||||||||||||||||    
T  16880752 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacacca--aatggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccgggt 16880655  T
Q  104 tgcccttt 111  Q
    | ||||||    
T  16880654 ttcccttt 16880647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 7368428 - 7368528
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||  ||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  7368428 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggt 7368523  T
Q  104 tgccc 108  Q
    |||||    
T  7368524 tgccc 7368528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 34154903 - 34154814
Alignment:
Q  20 cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||    
T  34154903 cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttt 34154814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 43574637 - 43574732
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||| |||||||||||||||||| ||||||| |||||  |||||||||||||||||| ||||| || |||||||||||||||| ||||||||    
T  43574637 ctcttgtgtagaaaacagggtaaggctgcgtacaatataccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagagcaccggg 43574732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 28516539 - 28516432
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||| || |||||| ||||||||| ||| ||||||||||||| ||||||||||| ||  |||| |||||||||||| ||| |||    
T  28516539 cctcttgtgtaaaaaacaggctagggctgcgtacaatacatcaa-aatggtgggacccattcccagaccctgcgcatgcaggagctttagtggaccaggt 28516441  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  28516440 tgccctttt 28516432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 29334425 - 29334532
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||||||||| ||||||||||| | ||||||||||||| ||||| ||||| || |||| |||| ||||| |||||||||     
T  29334425 cctcttgtgtaaaaaacaaggtaaggctgcgtacaatacacc-agaatggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggc 29334523  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  29334524 tgccctttt 29334532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 25622524 - 25622595
Alignment:
Q  40 tacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||| |||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgcccttt 25622595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 35710343 - 35710448
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| |  |||||||||||| | |||||||||||  |||||||||||||||||| || |  ||||||||||||||| |||||||||||||    
T  35710343 cctcttgtgtaaaata--gggtaaggctgcgttcaatacaccaa--atggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggt 35710438  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  35710439 tgcccttttt 35710448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 16957375 - 16957450
Alignment:
Q  35 tacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||||||||  |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  16957375 tacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 16957450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 209035 - 208936
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||  ||||| |  |||||  ||||||||||||||||    
T  209035 caacctcttgtgtaaaaa-cagggtaaggctgcattcaatacaccaa-aatggtgggaccccttcctggaccctgggtatgcaagagctttagtgcaccg 208938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19143050 - 19142941
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||  |||||||||||||||||| ||||  || |||||||||| |||||||||| |    
T  19143050 caacctcttgtgtaaaaa-cagggtaaggctgcgtacagtacaccaa--atggtgggaccccttcccggaccatgcgtatgcgggagatttagtgcactg 19142954  T
Q  101 ggttgcccttttt 113  Q
    |  ||||||||||    
T  19142953 gcctgcccttttt 19142941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 42924942 - 42924830
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccag--accccgcatatgcgggagctttagtgcac 98  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||||| |||| ||| | ||||||||||  |||| || ||||||| |||||||||||||    
T  42924942 caacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaaaaatgatggaatcccttcccagacaccctgcgtatgcggaagctttagtgcac 42924843  T
Q  99 cgggttgcccttt 111  Q
    ||| ||| |||||    
T  42924842 cggattgtccttt 42924830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 41425982 - 41426043
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagac 71  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  41425982 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaat--tggtgggaccccttcccagac 41426043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 11657785 - 11657697
Alignment:
Q  24 gtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||| ||| | |||||| ||||||| ||||||| ||||||||||    
T  11657785 gtaaggctgcatacaatacaccaa-aatggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgcccttttt 11657697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 16028683 - 16028622
Alignment:
Q  52 ggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 16028622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 7097864 - 7097772
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||  |||||| |||||||||||  |||| || ||||||||||||||||||||||    
T  7097864 cctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaa--atggtgagaccccttcccgaaccctgcgtatgcgggagctttagtgcacc 7097772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 3771379 - 3771475
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||||||||||||||   |||||||||||||  ||||||||||||||||| ||| | |  |||| |||||||||||||||||||| |||||||||    
T  3771379 aaaaaacagggtaaggctgtgaacaatacaccaat--tggtgggaccccttcccggactctgtgtatgtgggagctttagtgcaccgggctgccctttt 3771475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 22187315 - 22187422
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| | |||| |||| ||||||||||||| ||   || |||||||||||| ||||  ||||||| |||||||||||||| | |||    
T  22187315 cctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaaacaatgagaccccttcccaaaccctacatatgcaggagctttagtgcatcaggt 22187414  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  22187415 tgcccttt 22187422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 9794471 - 9794388
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||||| ||||||||||||||||||  || |||||| |||||| ||||||| |||||||| | ||||||||||||||||    
T  9794471 aaaacagggtaagactgcatacaatacaccaa--atagtgggatcccttcacagacccagcatatgcagaagctttagtgcaccgg 9794388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 39801591 - 39801652
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||||||||||| ||||    
T  39801591 tggtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgccatttt 39801652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 1565458 - 1565566
Alignment:
Q  1 caacctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||||| |||||||| ||   ||||||||| |||||| ||||||  |||| ||||||||||||| ||||| ||||||| |||||| ||||||||||    
T  1565458 caacctcttgagtaaaaaaacatattaaggctgcgtacaatgcaccaa--atggcgggaccccttcccggaccctgcatatgtgggagc-ttagtgcacc 1565554  T
Q  100 gggttgcccttt 111  Q
    ||||||||||||    
T  1565555 gggttgcccttt 1565566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 12575767 - 12575660
Alignment:
Q  4 cctcttgtgtaaa-aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||| ||||| ||||||| ||| | ||| ||||||||||||| ||||||||||||||||||  ||||| || ||||| |||||||| ||||||||||    
T  12575767 cctcttgcgtaaataaacaggctaaagttgcgtacaatacaccaa-aatggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccggg 12575669  T
Q  103 ttgcccttt 111  Q
     ||||||||    
T  12575668 ctgcccttt 12575660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 30877628 - 30877564
Alignment:
Q  47 ataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||| |||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||    
T  30877628 ataaaggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 30877564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24323813 - 24323725
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    ||||||||||||||||| ||||||||||  ||| || ||||| ||||  || ||||||||||||||||||||| | |||||||||||||||    
T  24323813 caacctcttgtgtaaaagacagggtaagcttgcgtataatactccaa--atagtgggaccccttcccagaccctgtatatgcgggagcttt 24323725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24360437 - 24360349
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    ||||||||||||||||| ||||||||||  ||| || ||||| ||||  || ||||||||||||||||||||| | |||||||||||||||    
T  24360437 caacctcttgtgtaaaagacagggtaagcttgcgtataatactccaa--atagtgggaccccttcccagaccctgtatatgcgggagcttt 24360349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1405214 - 1405324
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||| | ||||||| || |||||  ||| |||||||||||||  |||||||||||| ||||   |||| ||||||||||||||| |||| |||||    
T  1405214 caacctcttatataaaaaatagagtaagtttgcgtacaatacaccaa--atggtgggaccctttcctgaaccctgcatatgcgggagctctagtacaccg 1405311  T
Q  101 ggttgcccttttt 113  Q
    | |||||||||||    
T  1405312 gattgcccttttt 1405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 39301150 - 39301249
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||| |||||||||||||| ||| || ||| |||||| || |||||||||||||||| |||||  | |||| ||||| ||||||||||||    
T  39301150 caacctcttgtgtataaaacagggtaaggatgcgtataatgcaccaa-aaaggtgggaccccttcccggaccctccgtatgtgggag-tttagtgcaccg 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 22600488 - 22600569
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    |||||||||| ||||||||||||||  ||||||||||||  |||||||||| |||||||| || || || ||||||||||||||    
T  22600488 ttgtgtaaaacacagggtaaggctgtgtacaatacacca--aatggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 2838811 - 2838890
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagc 88  Q
    |||||||||||| ||||||||||||||| ||||||||||||  |||||||||| |||||| | ||||| || |||||||||||    
T  2838811 tcttgtgtaaaa-acagggtaaggctgcgtacaatacacca--aatggtgggatcccttctcggaccctgcgtatgcgggagc 2838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 30006352 - 30006456
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||| | |||| |||||||||||||||  |||| ||||| ||  |||||||||||||||||| |  ||    |||||||||||||||||||||||    
T  30006352 caacctcttatataaacaacagggtaaggctgtgtacattacactaa--atggtgggaccccttcccggggcctatgtatgcgggagctttagtgcaccg 30006449  T
Q  101 ggttgcc 107  Q
    |||||||    
T  30006450 ggttgcc 30006456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 10943900 - 10943843
Alignment:
Q  55 gggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||||||    
T  10943900 gggaccccttcccggaccctgca-atgcgggagctttagtgcaccgggctgcccttttt 10943843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 31694207 - 31694120
Alignment:
Q  10 gtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||||| ||| ||| ||||||||||||||||| ||  || |||||| ||||||||||||  || |||||||||| |||||||||||    
T  31694207 gtgtaaaaaataggctaaagctgcatacaatacacctat--tgatgggactccttcccagaccttgcgtatgcgggagatttagtgcacc 31694120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 5873426 - 5873322
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||  |||||||||||   |||| |||||||||  ||||||||| ||| ||| ||| | || |||||||||||||||||||| ||||     
T  5873426 cctcttgtgtaaaaat-agggtaaggctaagtacactacaccaat--tggtgggactcctccccggacactgcgtatgcgggagctttagtgcatcggga 5873330  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  5873329 tgcccttt 5873322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 10306548 - 10306493
Alignment:
Q  36 acaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttta 92  Q
    |||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||    
T  10306548 acaatacaccaa-aatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 32354211 - 32354263
Alignment:
Q  60 cccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||| ||||| |  |||||||||||||||||||||||||||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttt 32354263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 21784394 - 21784335
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    |||||||||||||||| || ||||| || |||||||||| |||||||||||| |||||||    
T  21784394 aatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 22861731 - 22861668
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||| |  |||| ||||||||||||||| ||||||||||  ||||||||||    
T  22861731 aatggtgggaccccttctcgaaccctgcatatgcgggagctctagtgcaccgaattgccctttt 22861668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 12477205 - 12477132
Alignment:
Q  25 taaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||  | || |||||  |||||||||||||||    
T  12477205 taaggctgcgtacaatacaccaa-aatggtgggaccccttcccggattctgcgtatgcaagagctttagtgcacc 12477132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 24903797 - 24903694
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||| ||||||||  ||  |||||| |||||||  ||||| ||||||||||| ||| | ||||| |||||| |||| |||||||||| || |    
T  24903797 ttgtgtaaaaaatagggtaagattgtgtacaatccaccaat--tggtgagaccccttcccggacactgcatacgcgggaactttggtgcaccgggctgtc 24903700  T
Q  108 cttttt 113  Q
    ||||||    
T  24903699 cttttt 24903694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 22907969 - 22907904
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggacccct-tcccagac 71  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||  ||||||||||||||| ||||||||    
T  22907969 cctcttgtgtaaaaa-cagagtaaggttgcatacaatacacca--aatggtgggacccctctcccagac 22907904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 1850668 - 1850764
Alignment:
Q  2 aacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||||||||| |||  ||||| ||| ||||||||| |||  ||||||||||| |||||  ||||| ||  |||||| ||||||||||||||||    
T  1850668 aacctcttgtgtaaaaa-cagaataagggtgcgtacaatacatcaa--atggtgggaccacttcctggaccctgcggatgcggaagctttagtgcaccgg 1850764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 29184094 - 29184062
Alignment:
Q  78 tatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||||||||||||||||||||||||||||||||    
T  29184094 tatgcgggagctttagtgcaccgggttgccctt 29184062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 29297862 - 29297914
Alignment:
Q  47 ataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||||||| |||||||| ||||||||| || |||| |||||||||||||    
T  29297862 ataatggtgggatcccttcccggaccccgcaaatacgggtgctttagtgcacc 29297914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 4654477 - 4654427
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||||| |||||| |  |||| |||||||||||||||||||||||||    
T  4654477 aatggtgggatcccttctcgaaccctgcatatgcgggagctttagtgcacc 4654427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 11462924 - 11462958
Alignment:
Q  75 gcatatgcgggagctttagtgcaccgggttgccct 109  Q
    ||||||||||||||| |||||||||||||||||||    
T  11462924 gcatatgcgggagctctagtgcaccgggttgccct 11462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 18684361 - 18684403
Alignment:
Q  64 tcccagaccccgcatatgcgggagctttagtgcaccgggttgc 106  Q
    |||||||||| || |||||||||||||||||||| ||||||||    
T  18684361 tcccagaccctgcgtatgcgggagctttagtgcatcgggttgc 18684403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 2432395 - 2432342
Alignment:
Q  11 tgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggacccctt 64  Q
    ||||||||||| || |||| |||||| |||||||||| |||||||| |||||||    
T  2432395 tgtaaaaaacaaggcaagggtgcatataatacaccaaaaatggtggaacccctt 2432342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 19438759 - 19438800
Alignment:
Q  69 gaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||    
T  19438759 gaccctgcatatgcgggagctctagtgcaccaggttgccctt 19438800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 19093894 - 19093950
Alignment:
Q  57 gaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||| ||| ||||| || ||||  ||||||||||||||||||| ||||||||||    
T  19093894 gacccctacccggaccctgcgtatgttggagctttagtgcaccgggctgcccttttt 19093950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 22025573 - 22025601
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctg 32  Q
    |||||||||||||||||||||||||||||    
T  22025573 cctcttgtgtaaaaaacagggtaaggctg 22025601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23974807 - 23974839
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgc 33  Q
    ||||||||||||||||||| |||||||||||||    
T  23974807 caacctcttgtgtaaaaaagagggtaaggctgc 23974839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 34074667 - 34074573
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||||||||||||||  |||||| ||| | ||||||||||  |||||  || |||||||||| |||| || |||| ||||||  ||||||||||||    
T  34074667 cctcttgtgtaaaaaacacagtaaggttgcgttcaatacacca--aatggcagggccccttcccaaaccctgcgtatgggggagc--tagtgcaccggg 34074573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 39079826 - 39079755
Alignment:
Q  35 tacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    ||||||||||||| ||||||||||||||||||| ||||  |  ||| |||||| |||||||||| ||| ||||    
T  39079826 tacaatacaccaa-aatggtgggaccccttcccggaccatgtgtatacgggagttttagtgcacagggctgcc 39079755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 20004197 - 20004089
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20004197 cctctcgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 20004098  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  20004097 tgccctttt 20004089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 30395833 - 30395725
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  30395833 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagt 30395734  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  30395733 tgccctttt 30395725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 35005176 - 35005284
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||| |||||||||||||||||    
T  35005176 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggcgctttagtgcaccgggt 35005275  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  35005276 tgccctttt 35005284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 18944696 - 18944806
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagc-tttagtgcaccggg 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||    
T  18944696 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccggg 18944795  T
Q  103 ttgcccttttt 113  Q
    |||||||||||    
T  18944796 ttgcccttttt 18944806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 10668278 - 10668386
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||||    
T  10668278 cctcttgtgtaaaaaacaaggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggt 10668377  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  10668378 tgccctttt 10668386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 18742054 - 18741954
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || |||||| |||||||||||||||||||| ||||||||    
T  18742054 aaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtttcccttttt 18741955  T
Q  114 a 114  Q
    |    
T  18741954 a 18741954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 46248058 - 46247951
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||| ||||| || |||||||||||||||||| |||||||    
T  46248058 cctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggt 46247961  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  46247960 tgcccttttt 46247951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 4349699 - 4349796
Alignment:
Q  12 gtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  4349699 gtaaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 27201700 - 27201809
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||  || ||||||||||||||||||||  ||||    
T  27201700 cctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgcattgggt 27201799  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  27201800 tgcccttttt 27201809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 46991854 - 46991964
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| |  |||||||||||||||||| ||||| || |||| ||||||||||||||||||    
T  46991854 caacctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccg 46991951  T
Q  101 ggttgcccttttt 113  Q
    |||||||| ||||    
T  46991952 ggttgcccatttt 46991964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 35253290 - 35253184
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| ||||||||||| |    
T  35253290 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggat 35253195  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  35253194 tgcccttttta 35253184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 23768425 - 23768325
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||||||||||||| || |||||||||||||||||||| ||| |    
T  23768425 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacacca--aatggtgggacaccttcccagaccctgcgtatgcgggagctttagtgcagcggat 23768328  T
Q  104 tgc 106  Q
    |||    
T  23768327 tgc 23768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 34725201 - 34725097
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||| ||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  34725201 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacactaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 34725106  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  34725105 tgccctttt 34725097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 45812630 - 45812535
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| |||||    
T  45812630 aaaagagggtaaggctgcatacaatacaccaa--atggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccgggttgcctttttt 45812535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 14617091 - 14617197
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||| |||| ||||||| ||| |||||||||||||  ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  14617091 cctcttgtgtaaataacaaggtaaggttgcgtacaatacaccaa--atggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggt 14617188  T
Q  104 tgccctttt 112  Q
    | |||||||    
T  14617189 taccctttt 14617197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 32632661 - 32632556
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||| |||| |||||||||||||||| |||||||| |||    
T  32632661 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcaccaggt 32632565  T
Q  104 tgccctttt 112  Q
    | |||||||    
T  32632564 ttccctttt 32632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 50606487 - 50606563
Alignment:
Q  37 caatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  50606487 caatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgcccttttt 50606563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 1517417 - 1517309
Alignment:
Q  4 cctcttgtgt-aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||| |||||||| | ||||||||| ||||||||||||||  ||||||||||||||| ||||||| || ||||| |||||||||||||||||||    
T  1517417 cctcttgtgttaaaaaacatgataaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccggg 1517320  T
Q  103 ttgcccttttt 113  Q
    |||||||||||    
T  1517319 ttgcccttttt 1517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 38478385 - 38478280
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  ||||||| |||||||| | ||||| ||||||||||||||| |||||||||||||    
T  38478385 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggt 38478290  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  38478289 tgcccttttt 38478280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 23796518 - 23796625
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| ||  |||||| ||| |||||||||||||  |||||| ||||||||||||||||| |||||||| |||||||||||||||||||     
T  23796518 cctcttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaa--atggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggc 23796615  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  23796616 tgcccttttt 23796625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 31382318 - 31382212
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||  |||||||||||||||||  ||||| |||||||||||||||||| || |||||||    
T  31382318 cctcttgtgtaaaaa-caggataaggctgcgtacaatacaccaa--atggtgggaccccttcctggaccctgcatatgcgggagctttactgtaccgggt 31382222  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  31382221 tgcccttttt 31382212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 42304303 - 42304205
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||| ||| |||||||||| || ||||||||||||||||||| ||||| || |||| ||||||||||||||||||| |||||||||||    
T  42304303 aaaaacagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgcccttttt 42304205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45264508 - 45264411
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||||||| ||||||||| |||||||||  | ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  45264508 caacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaa-aatggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 19414502 - 19414596
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||| ||||||||| |||||||||||||  ||||||||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||||    
T  19414502 aaaacaggttaaggctgcgtacaatacaccaa--atggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttt 19414596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 19932856 - 19932755
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| || |||||  || | |||||||||| |||||||    
T  19932856 ttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcaagatcattagtgcaccaggttgcc 19932757  T
Q  108 ct 109  Q
    ||    
T  19932756 ct 19932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 43768205 - 43768299
Alignment:
Q  17 aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||||||    
T  43768205 aaacagggtaaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgcccttttt 43768299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 41319910 - 41319805
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||  ||||  |||||||||||| || ||||||| |||||    
T  41319910 ctcttgtgtaaaaaacagggtaaggctgcgtacaatacacca--aatgatgggaccccttcccgaacccttcatatgcgggagtttcagtgcactgggtt 41319813  T
Q  105 gccctttt 112  Q
    ||||||||    
T  41319812 gccctttt 41319805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 6925153 - 6925260
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||| |||||||||||||  |||||||||| |  |||||||||||||||||| | ||| || ||||||||||||||||||||||| ||    
T  6925153 cctcttgtgtaaaaaatagggtaaggctgcggacaatacaccga--atggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagt 6925250  T
Q  104 tgcccttttt 113  Q
    |||| |||||    
T  6925251 tgcctttttt 6925260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 47214574 - 47214669
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||| ||||||||||||||| ||||||||| | || ||||||||    
T  47214574 aaaacagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccagaccctgcatatgcgggagctctagtgcaccagattacccttttt 47214669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 9939511 - 9939628
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggacccc-ttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    ||||||||||| ||| ||||| ||||||| ||| | ||||||||||| |||||||||||||| ||| | ||||| || ||||||||||||||||||||||    
T  9939511 caacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaaatggtgggacccccttctcggaccctgcgtatgcgggagctttagtgcacc 9939610  T
Q  100 gggttgccctttttagtg 117  Q
    ||||| ||||||| ||||    
T  9939611 gggttacccttttaagtg 9939628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 10378828 - 10378738
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||   ||||| |||||||||||||||||||||||||||| |||||    
T  10378828 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcttggaccctgcatatgcgggagctttagtgcaccgggctgccc 10378738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 12126930 - 12126836
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||||||||||||| |||||||||||||  || ||||||||||||||| ||||| ||||||||||||||| |||||||| | |||||||||||    
T  12126930 aaaacagggtaaggctgcgtacaatacaccaa--attgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgccctttt 12126836  T

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Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 22324946 - 22325049
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||  |||| |||| ||||| || |||||||||||||||||||||| ||     
T  22324946 cctcttgtgtaaaa-acagggtaaggctgcatacaatacaccaaaaatggtggagccccgtccc-gaccctgcgtatgcgggagctttagtgcaccaggc 22325043  T
Q  104 tgccct 109  Q
    ||||||    
T  22325044 tgccct 22325049  T

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Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35019280 - 35019389
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||| |||||| |||  ||||||||||||||||||||||||  |||||||||||| |||||||||| || |||||| ||||||||||||||||    
T  35019280 caacctcttgtataaaaatcagtataaggctgcatacaatacaccaat--tggtgggacccc-tcccagaccctgcgtatgcgagagctttagtgcaccg 35019376  T
Q  101 ggttgcccttttt 113  Q
    || |||| |||||    
T  35019377 ggctgccattttt 35019389  T

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Target: chr1; HSP #35
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 15511256 - 15511150
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgc--atacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| |||||||| |||||||||  ||||| || |||| | |||||||||||||||||    
T  15511256 cctcttgtgtaaaaaacagggtaaggctgcggatacaatacaccaa-aatggtggtaccccttcctggaccctgcgtatgtgtgagctttagtgcaccgg 15511158  T
Q  102 gttgccct 109  Q
    | ||||||    
T  15511157 gctgccct 15511150  T

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Target: chr1; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 35117873 - 35117765
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcat-atgcgggagctttagtgcaccggg 102  Q
    |||||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||||| ||||| || | |||| |||||||||||||||||||    
T  35117873 cctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccggg 35117774  T
Q  103 ttgcccttt 111  Q
     | ||||||    
T  35117773 cttcccttt 35117765  T

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Target: chr1; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 45402175 - 45402256
Alignment:
Q  30 ctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||| |||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  45402175 ctgcgtacaatacaccaa--atggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccgggttgcccgtttt 45402256  T

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Target: chr1; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39215067 - 39214961
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||||| |||||||||||| |||||||  |||| ||||||||| |||||||||| |||| || |||| || |||||||||||||||    
T  39215067 caacctcttgtgtaaaaaactgggtaaggctgcgtacaatattccaa-aatggtgggtccccttcccaaaccctgcgtatgtggaagctttagtgcaccg 39214969  T
Q  101 ggttgccc 108  Q
    || |||||    
T  39214968 ggctgccc 39214961  T

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Target: chr1; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 19701623 - 19701731
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||  ||||||| ||  ||||||||||||| ||||||||| ||||||||| ||||| || |||||||||||||||||||||| ||     
T  19701623 cctcttgtgtaaaaaacttggtaaggatgggtacaatacaccaa-aatggtggggccccttcccggaccctgcgtatgcgggagctttagtgcaccaggc 19701721  T
Q  104 tgcccttttt 113  Q
    | ||||||||    
T  19701722 tacccttttt 19701731  T

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Target: chr1; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 27474335 - 27474439
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||||| ||||| || ||||| ||||||||||  |  |||||||||||||||||| ||||| || |||||||||||||||||||||||| ||    
T  27474335 ctcttgtgtaaaaa-cagggcaaagctgcgtacaatacactga--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggatt 27474431  T
Q  105 gccctttt 112  Q
    ||||||||    
T  27474432 gccctttt 27474439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 8197096 - 8197203
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||||||| | |||| ||||||||  ||||| |||||||||| | ||||| || ||||  |||||||||||| |||||||    
T  8197096 cctcttgtgtaaaaaacatggtaaggctacgtacagtacaccaa--atggtaggaccccttctcggaccctgcgtatgttggagctttagtgtaccgggt 8197193  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  8197194 tgcccttttt 8197203  T

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Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25468371 - 25468285
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagct 89  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||  |||||| ||||| |||||||||||| || ||||||||||||    
T  25468371 caacctcttgtgtaaaaatcagggtaaggttgcgtacaatacacca--aatggttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

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Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 18724650 - 18724565
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    |||||||||||||||||||||||||||||  ||||||||||||  |||  |||||||||||||| |||||  ||||||||||||||||    
T  18724650 cctcttgtgtaaaaaacagggtaaggctgtgtacaatacacca--aatcttgggaccccttcccggaccctacatatgcgggagcttt 18724565  T

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Target: chr1; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27136760 - 27136661
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||| ||| |  |  ||||||||||||  |||||||||    
T  27136760 caacctcttgtgtaaaaaacatggtaaggttgcgtacaatacaccaa-aatggtgggaccccttcctagatcatgtgtatgcgggagctccagtgcaccg 27136662  T

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Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11596563 - 11596650
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||  |||||||||||||||||  ||||| || ||||||||||||||    
T  11596563 caacctcttgtgtaaaaa-cagggtaaggctgcgtataatacaccaa--atggtgggaccccttcctggaccctgcgtatgcgggagcttt 11596650  T

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Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 20999952 - 20999849
Alignment:
Q  7 cttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgc 106  Q
    ||||||||||||||| || |||||||| ||||||||||||  |||| |||| ||||||||   |||| || || |||||||||||||||||||||| |||    
T  20999952 cttgtgtaaaaaacaaggcaaggctgcgtacaatacacca--aatgatggggccccttccggcaccctgcgtacgcgggagctttagtgcaccgggctgc 20999855  T
Q  107 cctttt 112  Q
    ||||||    
T  20999854 cctttt 20999849  T

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Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 31442485 - 31442396
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||||||||||| ||| | |  |||| ||||||||| ||||||||||||    
T  31442485 aaaaaacagggtaaggatgcgtacaatacaccaa-aatggtgggaccccttcccggacactgtgtatgtgggagctttggtgcaccgggtt 31442396  T

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Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 6983907 - 6983810
Alignment:
Q  13 taaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||  ||| |||||||||||||  ||||||||||||||| || ||||| || || || |||||||| |||||||||| |||||||||    
T  6983907 taaaaaacagggtaagtatgcgtacaatacaccaa--atggtgggacccctttccggaccctgcgtaggcaggagctttggtgcaccgggctgccctttt 6983810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43207545 - 43207640
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgca 97  Q
    ||||||||| ||| |||||||||||||| | |||||||||||||||| | |||||||||| ||||||||||||    |||||| |||||||||||||    
T  43207545 caacctcttatgtgaaaaacagggtaagacggcatacaatacaccaa-attggtgggacctcttcccagaccctatgtatgcgagagctttagtgca 43207640  T

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Target: chr1; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 50811994 - 50812100
Alignment:
Q  6 tcttgtgtaaaa-aacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||| |||||||||||| ||| ||||||||||||| |||||| ||||||||||||   ||| || ||||||||||||||| ||||| ||| |    
T  50811994 tcttgtgtaaaaaaacagggtaaggttgcgtacaatacaccaa-aatggt-ggaccccttcccgcgccctgcgtatgcgggagctttaatgcactgggct 50812091  T
Q  105 gcccttttt 113  Q
    |||||||||    
T  50812092 gcccttttt 50812100  T

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Target: chr1; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 6358185 - 6358283
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||| |||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||| || ||||| ||| ||||||||  | ||| |||||||||||    
T  6358185 aaaatcagggtaaagctgcgtacaaaacaccaa-aatggtgggaccccttcccagaccctgcgtatgcaggatctttagtgatcggggctgcccttttta 6358283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 17470451 - 17470390
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcc 66  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||    
T  17470451 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa-aatagtgggacccgttcc 17470390  T

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Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 44485217 - 44485119
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||| ||||||||||| ||| ||||||||||| ||||||||||||  |||||| |||||||||||| || ||  | |||||||||||||| ||||||||    
T  44485217 caaccacttgtgtaaaagacatggtaaggctgcgtacaatacacca--aatggttggaccccttcccggatcctacgtatgcgggagcttt-gtgcaccg 44485121  T

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Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 2435892 - 2435796
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    |||| ||||| ||||| |||||||| |||| ||||||||||||| |||||||||||||||| ||  ||||  |  |||||||||||||||||||||||    
T  2435892 cctcctgtgtgaaaaatagggtaagcctgcgtacaatacaccaa-aatggtgggacccctttccgtaccctccgcatgcgggagctttagtgcaccgg 2435796  T

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Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 4587625 - 4587568
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgc 106  Q
    ||||||||||||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  4587625 aatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccgggttgc 4587568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 33594191 - 33594130
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||| | |||||||    
T  33594191 tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccctttt 33594130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 19656211 - 19656104
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||| ||||| |||   ||||||||||||| |||||| |||||| |||   ||||| ||||||||  |||||||| |||||||||     
T  19656211 cctcttgtgtaaaaaacatggtaacgctatgtacaatacaccaa-aatggtaggaccctttcttggaccctgcatatgcaagagctttaatgcaccgggc 19656113  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  19656112 tgccctttt 19656104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 15505632 - 15505710
Alignment:
Q  19 acagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||| |||| |||||||||||||  ||||||||||||||||||  |||| || |||||||||||||| ||||||||    
T  15505632 acagggtaagactgcgtacaatacaccaa--atggtgggaccccttcccgaaccctgcgtatgcgggagcttt-gtgcaccg 15505710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 20169194 - 20169084
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||| | |||||| |||  |||||||| |||||   |||||||| ||||||| ||||| ||||||||||||||||| |||  || ||     
T  20169194 cctcttgtgtaaaaaaaaaggtaagactgtgtacaataccccaatc--ggtgggactccttcccggaccctgcatatgcgggagcttttgtgtccctggc 20169097  T
Q  104 tgccctttttagt 116  Q
    |||||||| ||||    
T  20169096 tgccctttatagt 20169084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 7074588 - 7074663
Alignment:
Q  23 ggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||| |||||| ||||||||||||| ||| |||||||| ||| | |||||| |||||| ||||||||||||||||||    
T  7074588 ggtatggctgcgtacaatacaccaa-aattgtgggacctctttctagaccctgcatatccgggagctttagtgcacc 7074663  T

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Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 30555211 - 30555275
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||| | ||||| || |||||| |||||||||||||||||| || |||||||    
T  30555211 aatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcaccgggctgaccttttt 30555275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34679327 - 34679217
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagac----cccgcatatgcgggagctttagtgc 96  Q
    |||||||||||||||||||||||||||| |||| ||| ||||| ||  ||||||||  |||| | ||||||    || || ||||||||||||||||| |    
T  34679327 caacctcttgtgtaaaaaacagggtaagactgcgtactatacatca--aatggtggagccccgttccagacccggcctgcgtatgcgggagctttagtac 34679230  T
Q  97 accgggttgccct 109  Q
    |||||| ||||||    
T  34679229 accgggctgccct 34679217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 46859129 - 46859227
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||| | ||  ||| ||  || |||| ||||| |||||||||||||| | ||||||||    
T  46859129 aaaaaacagggtaagactgcgtacaatacaccaa-aatggtgggactcattttcaggccttgcgtatgtgggagttttagtgcaccgggcttcccttttt 46859227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24564394 - 24564440
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 47  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  24564394 caacctcttgtgtaaaaaacagggtaagggtgcgtacaattcaccaa 24564440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 4430129 - 4430088
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 47  Q
    ||||||||||||||||||||||| |||| |||||||||||||    
T  4430129 tcttgtgtaaaaaacagggtaagactgcgtacaatacaccaa 4430088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 16120819 - 16120876
Alignment:
Q  56 ggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||| | ||| |||||||||||||||||| |||||| || ||||||||||    
T  16120819 ggaccccttcccggcccctgcatatgcgggagctttaatgcaccaggctgcccttttt 16120876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 19974169 - 19974073
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||| |||| |||| ||| ||||||||||||| |||| |||||||| ||||| ||| |    ||||||||||||||||||||| ||| |||||||||    
T  19974169 aaaaatagggcaaggttgcgtacaatacaccaa-aatgatgggacccattcccggactctatgtatgcgggagctttagtgcacggggctgccctttt 19974073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22327149 - 22327204
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtggg 57  Q
    ||||||||||||||||||||||||||||||||  ||| || |||||| |||||||||    
T  22327149 caacctcttgtgtaaaaaacagggtaaggctgtgtacgatgcaccaa-aatggtggg 22327204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 1693222 - 1693273
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagc-tttagtgcacc 99  Q
    ||||||||||||||||||||||||| ||| |||| ||||| |||||||||||    
T  1693222 aatggtgggaccccttcccagacccggcagatgcaggagcttttagtgcacc 1693273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 21773675 - 21773636
Alignment:
Q  75 gcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  21773675 gcatatgtgggagctttggtgcaccgggttgcccttttta 21773636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 34149065 - 34148969
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||||||| |||| ||||||||| ||| ||||| | ||||  ||||||| ||||||||||  ||||| |||||||| |||||  ||||||| ||||    
T  34149065 cctcttgtgtagaaaatagggtaaggttgcgtacaaaagacca--aatggtgagaccccttcctggaccctgcatatgcaggagcgctagtgcaacggg 34148969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 28894611 - 28894561
Alignment:
Q  58 accccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    ||||||||| |||||| ||||||||| ||||||||||||||| || |||||    
T  28894611 accccttcctagaccctgcatatgcgagagctttagtgcaccaggctgccc 28894561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 33223037 - 33223093
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggacccc 62  Q
    ||||||||||||||| ||||| |||| ||| ||||||||||||| ||||||||||||||    
T  33223037 cctcttgtgtaaaaa-cagggaaaggttgcgtacaatacaccaa-aatggtgggacccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 21910743 - 21910693
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttccc 67  Q
    ||||| ||||||||| ||| ||||||||||||  |||||||||||||||||||    
T  21910743 aaaaatagggtaaggttgcgtacaatacacca--aatggtgggaccccttccc 21910693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 24564450 - 24564495
Alignment:
Q  69 gaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    ||||| || ||||| ||||| |||||||||||||||||||||||||    
T  24564450 gaccctgcctatgcaggagcgttagtgcaccgggttgcccttttta 24564495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 23371207 - 23371271
Alignment:
Q  35 tacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||  ||| ||||||||||||| |||||| || |||| || |||||||||||||||||    
T  23371207 tacaatacaccaa--atgctgggaccccttcc-agaccctgcgtatgtggtagctttagtgcaccggg 23371271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 41440664 - 41440600
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||| ||||||||| |||| | |  |||||||||||||||||| |||||  ||||||||||    
T  41440664 aatggtggaaccccttcctagactctgtgtatgcgggagctttagtgaaccggactgcccttttt 41440600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 50760273 - 50760237
Alignment:
Q  78 tatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  50760273 tatgcgggagctttaatgcaccgggctgcccttttta 50760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 50760331 - 50760287
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaat 48  Q
    ||||||||||| ||||| |||||||||||| || |||||||||||    
T  50760331 cctcttgtgtataaaactgggtaaggctgcgtataatacaccaat 50760287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 29355962 - 29355852
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  29355962 cctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 29355863  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  29355862 tgcccttttta 29355852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 12222022 - 12221913
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagc-tttagtgcaccggg 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||    
T  12222022 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccggg 12221923  T
Q  103 ttgccctttt 112  Q
    ||||||||||    
T  12221922 ttgccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2166520 - 2166408
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||   |||| |||||||||||||||||||    
T  2166520 caacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccg 2166421  T
Q  101 ggttgcccttttt 113  Q
    |||||||||||||    
T  2166420 ggttgcccttttt 2166408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2178153 - 2178041
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||   |||| |||||||||||||||||||    
T  2178153 caacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccg 2178054  T
Q  101 ggttgcccttttt 113  Q
    |||||||||||||    
T  2178053 ggttgcccttttt 2178041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 12892071 - 12892146
Alignment:
Q  38 aatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12892071 aatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 12892146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 1347004 - 1347099
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  1347004 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 1347099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 1354860 - 1354756
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  1354860 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 1354765  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  1354764 tgccctttt 1354756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 9161153 - 9161261
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| ||| |||||||||| ||||||||| ||||||||||||||||||||| | ||||| || ||||||| |||||||||||||| |||    
T  9161153 cctcttgtgtaaaaa-cagagtaaggctgcgtacaatacatcaataatggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggt 9161251  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  9161252 tgcccttttt 9161261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 26097190 - 26097296
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  26097190 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atgaagggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 26097285  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  26097286 tgcccttttta 26097296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 25557755 - 25557861
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||  || |||||||||| ||||| ||||||||||||||| |||||||||||||    
T  25557755 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atgaaggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 25557850  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  25557851 tgcccttttta 25557861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 12885967 - 12886049
Alignment:
Q  30 ctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||| |||||||||| || ||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctttt 12886049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 14975164 - 14975094
Alignment:
Q  37 caatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  14975164 caatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagttttagtgcaccgggttgcc 14975094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7947480 - 7947371
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||| ||||  || |||| ||||||||||||||||      
T  7947480 caacctcctgtgtaaaaaccagggtaaggctgcgtacaatacaccaa-aatggtgggcccccttcccggaccttgcgtatgtgggagctttagtgcactt 7947382  T
Q  101 ggttgcccttt 111  Q
    || ||||||||    
T  7947381 ggctgcccttt 7947371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 6024263 - 6024338
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcata 79  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||| ||||||| |||||| |||||||||||    
T  6024263 cctcttgtgtaaaaaacatggtaagactgcgtacaatacaccaataatgatgggacctcttcccggaccccgcata 6024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 19340858 - 19340954
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    |||||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||  ||||| || ||||||| |||||||||||| ||||    
T  19340858 cctcttgtgtaaaaaacagggtaaggttgca-acaatacaccaa-aatgatgggaccccttcctggacccggcgtatgcggaagctttagtgcaacggg 19340954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1941882 - 1941992
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||| |||  || |  |  |||||||||| ||| ||||||||    
T  1941882 caacctcttgtgtaaaaaacagggtaaggctgcgtacaatacacc--gaatggtgggaccccatcctggatcttgtgtatgcgggagtttttgtgcaccg 1941979  T
Q  101 ggttgcccttttt 113  Q
     ||||||||||||    
T  1941980 tgttgcccttttt 1941992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 6808467 - 6808532
Alignment:
Q  48 taatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||    
T  6808467 taatggtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttttt 6808532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 13267788 - 13267863
Alignment:
Q  37 caatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||||||  |||||||||||||||||  ||||| || ||||||||||||| |||||||||||||||||||||||    
T  13267788 caatacaccaa--atggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgcccttttta 13267863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 18277298 - 18277191
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||| ||  ||||  |||||||  ||||||||||||||||| |||| |  | ||||||||||||||| ||||||||||    
T  18277298 cctcttgtgtaaaaatcagggtaaggttgagtacagaacaccaa--atggtgggaccccttcctagactctacgtatgcgggagctttactgcaccgggt 18277201  T
Q  104 tgcccttttt 113  Q
    || |||||||    
T  18277200 tgtccttttt 18277191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 3116204 - 3116127
Alignment:
Q  36 acaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||| ||||||||||||||||| | ||||  || ||||||||||||||||| |||||| |||||||||||    
T  3116204 acaatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccggattgcccttttt 3116127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 9671190 - 9671082
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| |||  |||| ||| |||||| ||||||||| ||  |||| ||| || ||||||||||| |||| ||||     
T  9671190 cctcttgtgtaaaaaacagggtaaggctgcctactttacatcaa-aatggtaggacccctttccgaaccctgcaaatacgggagctttaatgcatcgggc 9671092  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  9671091 tgcccttttt 9671082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 24097611 - 24097714
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||| ||||||||||||||||||||| |||||    ||||  |||||||||||||||||| ||||| || ||||||| ||||||||||  || |||    
T  24097611 cctcttgtataaaaaacagggtaaggctgcttacaa----ccaa--atggtgggaccccttcccggaccctgcgtatgcggaagctttagtgtcccaggt 24097704  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  24097705 tgcccttttt 24097714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 32579474 - 32579543
Alignment:
Q  23 ggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagt 94  Q
    |||||| |||| |||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  32579474 ggtaagcctgcgtacaataccccaa--atggtgggaccccttcccagaccctgcatatgcgggagctttagt 32579543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 2755518 - 2755422
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatat--gcgggagctttagtgcaccgggttgccctt 110  Q
    ||||| ||| ||||||||| ||||||||||||| ||||||||||  |||||||| | || ||||||  ||||||||||||||||||| ||||||||||    
T  2755518 aaaaataggctaaggctgcgtacaatacaccaaaaatggtgggagtccttcccaaatcctgcatatgcgcgggagctttagtgcacc-ggttgccctt 2755422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 23930188 - 23930126
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||||||||||| | ||||| || ||||||||||||||||||||||| |||||||||||    
T  23930188 atggtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttt 23930126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 383834 - 383760
Alignment:
Q  35 tacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||||  || ||||||||||||| ||||||| || ||||||||||||| ||| ||||||||||||||||    
T  383834 tacaatacaccaa--attgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttt 383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 20906841 - 20906784
Alignment:
Q  56 ggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||| ||||||    
T  20906841 ggaccccttcccagaccccgcatatgcgggagctttagtgaaccaagttgctcttttt 20906784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 13905085 - 13905041
Alignment:
Q  3 acctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 47  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  13905085 acctcttgtgtaaaaaacagggtaaggctgcatacaattcaccaa 13905041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 33138860 - 33138957
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||| |||||||||| ||||||| || ||||||||||||  ||||||||||||| || || ||||| |  ||||| | |||||||||||||||    
T  33138860 caacctcttgtataaaaaacagagtaaggccgcgtacaatacacca--aatggtgggacccttttccggaccctgtgtatgcagtagctttagtgcaccg 33138957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 12889456 - 12889562
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||| |||||||||| |||||||||||||||||||| | || | ||||||||||| || |||||    | || ||||||||||||||| ||||     
T  12889456 cctcttgtgttaaaaacagggcaaggctgcatacaatacaccta-aacgatgggacccctttccggaccctctgtgtgtgggagctttagtgcatcgggc 12889554  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  12889555 tgcccttt 12889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 14553543 - 14553626
Alignment:
Q  6 tcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagct 89  Q
    |||||||||||||| ||||||||||||  || |||||||||| | |||||||||||||||  |||||| |  ||||||||||||    
T  14553543 tcttgtgtaaaaaatagggtaaggctgtgtataatacaccaaaactggtgggaccccttcgtagaccctgtgtatgcgggagct 14553626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 17432393 - 17432483
Alignment:
Q  21 agggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||||  |||||||||| || ||||||| ||||  ||||| || || |   |||||||||||||||||||||||||||||||||    
T  17432393 agggtaaggctgtgtacaatacactaaaaatggtgagaccttttcccggatcctgtgcatgcgggagctttagtgcaccgggttgcccttt 17432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 28007658 - 28007761
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||| ||||||| ||||||||||||  |||| ||||||||||||||  ||| | ||||||||| |||| ||||||||||| |    
T  28007658 cctcttgtgtaaaa--cagggtcaggctgcgtacaatacacca--aatgctgggaccccttccctaacctc-catatgcggaagctctagtgcaccggat 28007752  T
Q  104 tgccctttt 112  Q
    | |||||||    
T  28007753 taccctttt 28007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 32068121 - 32068182
Alignment:
Q  2 aacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggacccctt 64  Q
    |||||||||||||||||||||| ||| ||||  ||||||||||||| ||||||||||||||||    
T  32068121 aacctcttgtgtaaaaaacaggataatgctgtttacaatacaccaa-aatggtgggacccctt 32068182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 3815178 - 3815084
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||| | |||| | |||| |||||||||||||  |||||||||||| |||||  ||||  | ||||||| |||||||||||||||||||    
T  3815178 ttgtgtaaaaaatatggtacgactgcgtacaatacaccaa--atggtgggaccctttcccgaaccctacgtatgcggaagctttagtgcaccgggtt 3815084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 10734965 - 10734905
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||| ||||||||| ||||| || ||||||||||||||||| ||||||| ||||||||    
T  10734965 tggtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttt 10734905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 32728264 - 32728156
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||| |||||||||||||||||| |||  ||||||| |||||  || ||||  ||| |||||||||||  | ||||||||| ||||||||||||     
T  32728264 caacctcttatgtaaaaaacagggtaagactgtgtacaatataccaa--atagtggt-ccctttcccagaccctacgtatgcgggaactttagtgcacca 32728168  T
Q  101 ggttgccctttt 112  Q
     |||||||||||    
T  32728167 tgttgccctttt 32728156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 15866134 - 15866041
Alignment:
Q  12 gtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    |||||||||||||||| ||||| ||  |||||||||  |||||||||||||||||| ||||| || | ||||||| || |||||||| | ||||||||    
T  15866134 gtaaaaaacagggtaaagctgcgta--atacaccaa--atggtgggaccccttcccggaccctgcgtttgcgggatctatagtgcactgagttgccct 15866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 24734682 - 24734760
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttag 93  Q
    |||||||||||||||| ||| ||||||||| ||| || |||||||||||||||| || || || ||||| ||||||||||    
T  24734682 aaaaaacagggtaaggttgcgtacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatgc-ggagctttag 24734760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 8409273 - 8409311
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatac 42  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  8409273 cctcttgtgtaaaaaacagggtaaggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11849080 - 11849145
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttccc 67  Q
    ||||||||||||| ||||||||| ||| | |||  |||||||||||| |||||||||||||||||||    
T  11849080 caacctcttgtgttaaaaacaggataaagttgcccacaatacaccaa-aatggtgggaccccttccc 11849145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 16895778 - 16895704
Alignment:
Q  31 tgcatacaatacaccaataatggtggga-ccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    |||||||||||||| || |||||||||| ||||||||| |||||  |||||| || || ||||||||||||||||    
T  16895778 tgcatacaatacactaaaaatggtgggacccccttcccggaccctacatatgtggaagttttagtgcaccgggtt 16895704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 25997749 - 25997787
Alignment:
Q  76 catatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  25997749 catatgcgggagctctagtgcaccgggttgcccttttta 25997787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 16916064 - 16915996
Alignment:
Q  34 atacaatacaccaataatggtgggacc-ccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||| || |||||| ||||| |||||| ||||||  |||||| |||||||||||||||||||    
T  16916064 atacaatacactaaaaatggtaggacctccttcctagaccctacatatgtgggagctttagtgcaccgg 16915996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 24751176 - 24751066
Alignment:
Q  7 cttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcg-----ggagctttagtgcaccgg 101  Q
    ||||||||||||| |||||||| |||| |||||||||| || ||||||| ||||||||| |  |||  || ||||||     | ||||||||||||||||    
T  24751176 cttgtgtaaaaaatagggtaagactgcgtacaatacactaa-aatggtgagaccccttcacgaaccgtgcgtatgcgtatgagcagctttagtgcaccgg 24751078  T
Q  102 gttgcccttttt 113  Q
    |||||| |||||    
T  24751077 gttgccattttt 24751066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 30786407 - 30786372
Alignment:
Q  78 tatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||||||||||||| |||||    
T  30786407 tatgcgggagctttagtgcaccgggttgcctttttt 30786372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 11395836 - 11395886
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||||||||| || || || ||||||||||||||||| ||||||    
T  11395836 tggtgggaccccttcccggatcctgcgtatgcgggagctttagtccaccgg 11395886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 18254559 - 18254651
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||||||||| ||||| |  | |||  ||||| ||| |||||||||| ||||||    
T  18254559 aaaaacagggtaaagctgcatacaatac-ccaa-aatagtgggaccccttcacagactctacgtatatgggagttttggtgcaccgggctgccct 18254651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 33922916 - 33922854
Alignment:
Q  52 ggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    ||||| |||||||||| ||||| || ||||  |||||||||||||||  ||||||||||||||    
T  33922916 ggtggcaccccttcccggaccctgcttatgttggagctttagtgcacatggttgcccttttta 33922854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 12228389 - 12228498
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||| ||||||| ||| ||| | ||| ||||||||||||   || |||||||||||||||| | ||  | || | ||||| ||||||| || |||||    
T  12228389 ctcttgtttaaaaaataggataaagttgcgtacaatacaccag--atagtgggaccccttcccataacctacgtaagtgggagttttagtgtactgggtt 12228486  T
Q  105 gccctttttagt 116  Q
    ||||||||||||    
T  12228487 gccctttttagt 12228498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 14341166 - 14341134
Alignment:
Q  13 taaaaaacagggtaaggctgcatacaatacacc 45  Q
    ||||||||||||||||||||| |||||||||||    
T  14341166 taaaaaacagggtaaggctgcgtacaatacacc 14341134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 29016337 - 29016301
Alignment:
Q  56 ggaccccttcccagaccccgcatatgcgggagcttta 92  Q
    |||||||||||||||||| || |||||||||||||||    
T  29016337 ggaccccttcccagaccctgcgtatgcgggagcttta 29016301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 10543728 - 10543835
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  10543728 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 10543827  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  10543828 tgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 14530348 - 14530455
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  14530348 cctcttgtataaaaaacagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 14530447  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  14530448 tgcccttt 14530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 5841062 - 5841166
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  5841062 ttgtgtaaaaaatagggtaaggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcc 5841161  T
Q  108 ctttt 112  Q
    |||||    
T  5841162 ctttt 5841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 8455421 - 8455315
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||| ||||||||||||||||||||    
T  8455421 cctcttgtgtaaaacacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggt 8455324  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  8455323 tgccctttt 8455315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 10546203 - 10546300
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  10546203 aaaaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 10546300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 24200730 - 24200622
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| ||||| |  |||| | |||||||||||||||||||    
T  24200730 cctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggt 24200631  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  24200630 tgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 9671211 - 9671315
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  9671211 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggt 9671306  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  9671307 tgccctttt 9671315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 21779364 - 21779260
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||| ||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  21779364 cctcttgtgtaaaa--cagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 21779269  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  21779268 tgccctttt 21779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 31158546 - 31158436
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||| |||||||||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||| | |    
T  31158546 cctcttgcgtaaaaaacagggtaagattgcatacaataaaccaaaaatggtgggaccccttcccagaccctgcgtatgcgggagctttagtacacctgat 31158447  T
Q  104 tgcccttttta 114  Q
    || ||||||||    
T  31158446 tgtccttttta 31158436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 11514466 - 11514571
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||||  |||||||||| |||||||||||||  |||||||||||| ||||||||||| || |||||||||||||||||||||||| |    
T  11514466 cctcttgtgtaaaaaacaaagtaaggctgcgtacaatacaccaa--atggtgggaccc-ttcccagaccctgcgtatgcgggagctttagtgcaccggat 11514562  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  11514563 tgccctttt 11514571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 14444759 - 14444865
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||| |||||||||||||  ||| |||||||||  |||||||||||||||||| ||||| || |||||||||||||||||||||| |||    
T  14444759 cctcttgtgtaaaaa-cagggtaaggctgtgtacgatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggt 14444855  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  14444856 tgcccttttt 14444865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 36871534 - 36871628
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||  || ||||||||||||||||||||||||||||||||||||    
T  36871534 aaaacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggacct-gcgtatgcgggagctttagtgcaccgggttgcccttttt 36871628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 17668030 - 17668139
Alignment:
Q  2 aacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| |||||||| |  |||| || |||  |||||||||||||||||||    
T  17668030 aacctcttgtgtaaaaatcagggtaaggctgcgtacaatacacca--aatggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgg 17668127  T
Q  102 gttgcccttttt 113  Q
    ||||||||||||    
T  17668128 gttgcccttttt 17668139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 40762339 - 40762234
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||| |||||||||| | |||||||||||||  |||||||||||| ||||  ||||| || |||| |||||||||||||||||||||    
T  40762339 cctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaa--atggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggt 40762242  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  40762241 tgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32781396 - 32781308
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||||||||||| |  ||||||||||||||    
T  32781396 caacctcttgtgtaaaaaacagggtaagactgcgtacaatacacca--aatggtgggaccccttcccagaccctgtgtatgcgggagcttt 32781308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 17623591 - 17623701
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||  |||||||| ||||||||||  | || || |||| || ||||||||||||| |    
T  17623591 caacctcttgtgtaaaaatcagggtaaggctgcgtacaatacacca--aatggtggaaccccttcccgaatcctgcgtatgtggaagctttagtgcactg 17623688  T
Q  101 ggttgcccttttt 113  Q
    |||||||||||||    
T  17623689 ggttgcccttttt 17623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 25249830 - 25249736
Alignment:
Q  17 aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||| |||||||||||||  ||||||||| ||||||||  |||| || |||||| |||||||||||||||||||||||||||||    
T  25249830 aaacagggtaaggctgcgtacaatacaccaa--atggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgcccttttt 25249736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25079826 - 25079717
Alignment:
Q  1 caacctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||| |  |||||||||||||||||| ||||| || |||||  |||||||||||||||    
T  25079826 caacctcttgtgtaaaaaaacaaggtaaggatgcgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgcaagagctttagtgcacc 25079729  T
Q  100 gggttgcccttt 111  Q
    ||||||||||||    
T  25079728 gggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17896286 - 17896398
Alignment:
Q  1 caacctcttgtgtaaaaaac-agggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||||||||||||||  ||||||||||||| ||||||| |||||  |||||||||||||||| | ||||| || |||| ||||||||||||||| |    
T  17896286 caacctcttgtgtaaaaaaatagggtaaggctgcgtacaatataccaa--atggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcatc 17896383  T
Q  100 gggttgcccttttta 114  Q
    | |||||||||||||    
T  17896384 gagttgcccttttta 17896398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 44643563 - 44643659
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||| |||||||||| ||||||  |||||  |||||||||||||||||||||||| || ||||||||||| ||||||||||||| |||||||||    
T  44643563 aaaaaacagagtaaggctgcgtacaatgtaccaa--atggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctttt 44643659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 4516456 - 4516354
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||  ||||||||||||||||| ||||| || |||| || |||||||||| ||||||     
T  4516456 cctcttgtgtaaaaaacagggcaacgctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgtggaagctttagtgtaccgggc 4516359  T
Q  104 tgccc 108  Q
    |||||    
T  4516358 tgccc 4516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 23397796 - 23397899
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| |  |||||||||| | |||||||||||||  |||||||||||||||| | |||||  |||||||||||||| |||||||||||||    
T  23397796 cctcttgtgtaaaata--gggtaaggctacgtacaatacaccaa--atggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggt 23397891  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  23397892 tgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 24890451 - 24890533
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcac 98  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||| || ||||| |||||||||||||||    
T  24890451 aaaaaacaaggtaaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcac 24890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 39914414 - 39914305
Alignment:
Q  1 caacctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    ||||||||||||||||||| |||||||||| ||  ||||||||||| |  |||||||||||||||||  ||||| || |||||||||||||||||||| |    
T  39914414 caacctcttgtgtaaaaaaacagggtaaggatgtgtacaatacaccga--atggtgggaccccttcct-gaccctgcgtatgcgggagctttagtgcatc 39914318  T
Q  100 gggttgccctttt 112  Q
    |||||||||||||    
T  39914317 gggttgccctttt 39914305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 21377178 - 21377071
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||  |||||| |||||  |||||||||||||||||||  |||| || |||| ||||||||| |||||||| |     
T  21377178 cctcttgtgtaaaaaacagggtaaggctgggtacaatgcacca--aatggtgggaccccttcccgaaccctgcgtatgtgggagcttt-gtgcaccgagc 21377082  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  21377081 tgcccttttta 21377071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 25632544 - 25632644
Alignment:
Q  9 tgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    ||||||||||||||| ||||||||| |||||||||||||  |||||||||  |||||||  |||   | |||||||||||||||||||||||||||||||    
T  25632544 tgtgtaaaaaacaggataaggctgcgtacaatacaccaa--atggtgggattccttcccgaaccttacgtatgcgggagctttagtgcaccgggttgccc 25632641  T
Q  109 ttt 111  Q
    |||    
T  25632642 ttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 40416979 - 40416871
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||| |||||||||||| |||||||  ||||||||||||||  || |||||||| ||    ||||| ||||||||| ||||||||||||||||    
T  40416979 caacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaat--tgatgggacccttttttggaccctgcatatgcgagagctttagtgcaccg 40416882  T
Q  101 ggttgcccttt 111  Q
    |||||||||||    
T  40416881 ggttgcccttt 40416871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 34080176 - 34080237
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttt 34080237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 7214565 - 7214673
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||| ||||||||||||||| |||||||||| || ||||||| || |||||| | ||| | || |||||| ||| ||||||||||| ||||    
T  7214565 ctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaaatggtgagatcccttctcggacactgcgtatgcgagagttttagtgcaccaggtt 7214664  T
Q  105 gcccttttt 113  Q
    ||| |||||    
T  7214665 gcctttttt 7214673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 19615022 - 19615116
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    |||||||| |||||||||||||||| |||| ||||||| ||||||||| || ||||||||||||  |||| || ||||| ||||||||||||||||    
T  19615022 cctcttgtataaaaaacagggtaagactgcgtacaatataccaataatagt-ggaccccttcccgaaccctgcgtatgcaggagctttagtgcacc 19615116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 23488544 - 23488619
Alignment:
Q  37 caatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||||| || ||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||| |||||    
T  23488544 caatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgctctttt 23488619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 41409936 - 41409995
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccct 109  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 3633762 - 3633708
Alignment:
Q  57 gaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  3633762 gaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgcccttt 3633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 30826067 - 30826172
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||  ||||||||| ||| |||||||||||||  ||||||| |||| |||||||||||  |||||||||||||||||||||||| | |    
T  30826067 cctcttgtgtaaaaat-agggtaaggttgcgtacaatacaccaa--atggtggaaccc-ttcccagaccctacatatgcgggagctttagtgcaccagat 30826162  T
Q  104 tgcccttttt 113  Q
    || |||||||    
T  30826163 tgtccttttt 30826172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33795312 - 33795400
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatac-aatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt 91  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||    |||||||||||||||||||||||| |  ||||||||||||||    
T  33795312 caacctcttgggtaaaaaacagggtaaggctgcgtacaaatacacc---tatggtgggaccccttcccagaccctgtgtatgcgggagcttt 33795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 14544093 - 14544201
Alignment:
Q  4 cctcttgtgta-aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccggg 102  Q
    ||||||||||| |||||||||||||| |||| | |||||  | || |||||| |||||||||||  ||||| || ||||||||||||||||||||||  |    
T  14544093 cctcttgtgtagaaaaacagggtaagactgcgtgcaataaccaaaaaatggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaag 14544192  T
Q  103 ttgcccttt 111  Q
    |||||||||    
T  14544193 ttgcccttt 14544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 40579810 - 40579750
Alignment:
Q  50 atggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    |||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||    
T  40579810 atggtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 44521477 - 44521392
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttta 92  Q
    ||||||||||||||||| |||||||||||||| |||||||||  ||||| |||| ||||||||||||   |||||| |||||||||||    
T  44521477 ctcttgtgtaaaaaacaaggtaaggctgcatataatacacca--aatggcgggagcccttcccagacattgcatatacgggagcttta 44521392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 26684727 - 26684615
Alignment:
Q  3 acctcttgtgtaaaaaac-agggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    |||||||||||||||||  | ||||||||||| ||||||| || ||  ||||||||||| ||||||  |||| || ||||||||||||||| ||||||||    
T  26684727 acctcttgtgtaaaaaaatatggtaaggctgcgtacaatatactaa--atggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccgg 26684630  T
Q  102 gttgccctttttagt 116  Q
     ||| ||||||||||    
T  26684629 attgtcctttttagt 26684615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 27573651 - 27573758
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||| ||| || ||||||||||| |||||||||||||  ||||||| |||  |||||| |||| |  |||| ||||||||||||||| |||||    
T  27573651 cctcttgtgtataaa-catggtaaggctgcgtacaatacaccaa--atggtggaaccatttcccaaaccctgtgtatgtgggagctttagtgcatcgggt 27573747  T
Q  104 tgcccttttta 114  Q
    |||||||||||    
T  27573748 tgcccttttta 27573758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 12024023 - 12023929
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    ||||||||||||||| |||||||||||||| ||||||||||||  |||||||||||||| |||| ||||| || |||  || ||||||| ||||||||    
T  12024023 cctcttgtgtaaaaa-cagggtaaggctgcgtacaatacacca--aatggtgggaccccctcccggaccctgcgtatttggaagctttaatgcaccgg 12023929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 17471578 - 17471675
Alignment:
Q  4 cctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgg 101  Q
    |||||||||||||||| |||| |||| |||| ||||||| ||||| |||| || ||||||||||| ||||| || |||||||||| |||||||||||||    
T  17471578 cctcttgtgtaaaaaaacaggataagactgcgtacaatataccaa-aatgatgagaccccttccctgaccctgcctatgcgggagttttagtgcaccgg 17471675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 34766330 - 34766392
Alignment:
Q  51 tggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||| |||||| ||||||||    
T  34766330 tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggtttcccttttt 34766392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 99363 - 99281
Alignment:
Q  11 tgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtg 95  Q
    ||||||||||| || |||||||| |||||||||||||  ||||||| |||||||| ||||||| |  ||||||||||||||||||    
T  99363 tgtaaaaaacatggcaaggctgcgtacaatacaccaa--atggtggaaccccttctcagaccctgtgtatgcgggagctttagtg 99281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 23145802 - 23145736
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccc 73  Q
    |||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||| ||||| |||||    
T  23145802 ctcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaat--tggtgggaccctttcccggaccc 23145736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 23557592 - 23557526
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccc 73  Q
    |||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||| ||||| |||||    
T  23557592 ctcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaat--tggtgggaccctttcccggaccc 23557526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 24860094 - 24859986
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||| ||||||||| || |||| |||||| |||||||||||||  ||||| | |||||||| | ||||| || |||||||||||||||||||||||    
T  24860094 caacctctggtgtaaaaa-catggta-ggctgcgtacaatacaccaa--atggtagaaccccttctcggaccctgcgtatgcgggagctttagtgcaccg 24859999  T
Q  101 ggttgcccttttt 113  Q
    | ||||| |||||    
T  24859998 gattgcctttttt 24859986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 39189555 - 39189502
Alignment:
Q  60 cccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  39189555 cccttcccggaccccgcatatgcgggagctctagtgcaccgggttgcctttttt 39189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 13245181 - 13245096
Alignment:
Q  23 ggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctt 110  Q
    ||||||||||| |||| ||||| ||  |||||||||||||||||| ||||  |||||| |||||||||||||| | ||||||||||||    
T  13245181 ggtaaggctgcgtacattacactaa--atggtgggaccccttcccggaccatgcatatacgggagctttagtgtatcgggttgccctt 13245096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 22371095 - 22371151
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccc 73  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||    
T  22371095 aaaaacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccc 22371151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 1289093 - 1289159
Alignment:
Q  47 ataatggtgggaccccttcccagaccccgcatatgcgggagc-tttagtgcaccgggttgccctttt 112  Q
    ||||||||||||||||||||| || |  |||||||||||||| ||||||||||||| ||||||||||    
T  1289093 ataatggtgggaccccttcccggatcatgcatatgcgggagcttttagtgcaccggattgccctttt 1289159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 19977819 - 19977712
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||| ||||||||| ||| ||||| ||| |||||||||||||  ||||||||| ||||||||  |||  |  |||||||||||||||||||||| | |    
T  19977819 cctcttttgtaaaaaataggataaggttgcgtacaatacaccaa--atggtgggatcccttcccgaaccttgtgtatgcgggagctttagtgcaccagat 19977722  T
Q  104 tgcccttttt 113  Q
    | ||||||||    
T  19977721 tacccttttt 19977712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44449492 - 44449395
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcacc 99  Q
    ||||||||||  | ||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||| ||||| || | || ||||| |||| ||||||    
T  44449492 caacctcttgaatgaaaaacaggataaggctgcgtacaatacaccaa-aatagtgggaccccttcccggaccctgcgtttgtgggagttttaatgcacc 44449395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 15296508 - 15296404
Alignment:
Q  8 ttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    |||||||||| ||||||||||||||| ||||||| ||||| ||| |||||| |||||| | ||||| || |||| || |||||| |||| || || ||||    
T  15296508 ttgtgtaaaatacagggtaaggctgcgtacaatataccaa-aatagtgggatcccttctcggaccctgcgtatgtggaagctttggtgcgccaggctgcc 15296410  T
Q  108 cttttt 113  Q
    ||||||    
T  15296409 cttttt 15296404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 22371199 - 22371248
Alignment:
Q  63 ttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    ||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 22371248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5450312 - 5450376
Alignment:
Q  1 caacctcttgtgtaaaaaa-cagggtaaggctgcatacaatacaccaataatggtgggaccccttcc 66  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||  || |||||||||||||||    
T  5450312 caacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacacca--aagggtgggaccccttcc 5450376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 8575975 - 8576030
Alignment:
Q  56 ggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    |||||||||||| ||||| || |||| ||||||||||||||||| |||||||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcaccaggttgcccttt 8576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 31525779 - 31525838
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 108  Q
    |||| |||||||| || |||||||| ||||||||||||||||||||| ||||| ||||||    
T  31525779 aatgatgggaccctttgccagaccctgcatatgcgggagctttagtgtaccggattgccc 31525838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 25641543 - 25641638
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||| | ||| |||||||||||||  || |||||||||||||||  | || || |||||| ||||||||||| ||||| ||| |||||||    
T  25641543 aaaacagggtaaagttgcgtacaatacaccaa--attgtgggaccccttcccgaatcctgcgtatgcgagagctttagtgaaccggattgtccttttt 25641638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 31523304 - 31523358
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||| |||| |||||| |||| |||||||||||||||||||||||| ||||    
T  31523304 aatggtggaaccctttcccaaaccctgcatatgcgggagctttagtgcactgggt 31523358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 124962 - 124918
Alignment:
Q  63 ttcccagaccccgcatatgcgggagctttagtgcaccgggttgcc 107  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 124918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 19185837 - 19185743
Alignment:
Q  17 aaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttt 111  Q
    ||||| ||||| | ||| |||||| ||| || |||||||| |||||||||  ||||| || ||||||||||||||||| || || ||| ||||||    
T  19185837 aaacatggtaaagttgcgtacaatgcacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagctttagtacatcgagttacccttt 19185743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 23053012 - 23052962
Alignment:
Q  64 tcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    |||||||||| || ||||| |||||||| |||||||||| |||||||||||    
T  23053012 tcccagaccctgcgtatgcaggagcttttgtgcaccgggctgcccttttta 23052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 4794875 - 4794924
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcac 98  Q
    |||| |||||||||||||| || || ||||||||||||||| ||||||||    
T  4794875 aatgatgggaccccttcccggatcctgcatatgcgggagctctagtgcac 4794924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29419997 - 29419947
Alignment:
Q  1 caacctcttgtgtaaaaaacaggg----taaggctgcatacaatacaccaa 47  Q
    ||||||||||||||||||||||||    ||||||||| |||||||||||||    
T  29419997 caacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacaccaa 29419947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 45235879 - 45235815
Alignment:
Q  49 aatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||||||| ||||||||  | ||||| |||||||||||| |||  ||||||| ||||    
T  45235879 aatggtgggaccccttaccagaccctacgtatgcaggagctttagtgtaccaagttgcccctttt 45235815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 46858 - 46968
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||  |||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  46858 caacctcttgtgtaaaaaatagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccg 46955  T
Q  101 ggttgcccttttt 113  Q
    |||||||||||||    
T  46956 ggttgcccttttt 46968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 24877 - 24770
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||  |||| || |||||||||||||||||||| | |||    
T  24877 cctcttgtgtaaaaaacagggtaaggctgcgtacaacacaccaa--atggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcagccggt 24780  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  24779 tgcccttttt 24770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 46796 - 46721
Alignment:
Q  21 agggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgca 97  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  46796 agggtaaggatgcatacaatataccaa-aatggtgggaccccttcccagaccctgcgtatgcgggagctttaatgca 46721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 43699 - 43794
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcc-cagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 112  Q
    |||||| ||||||||||| |||||||||||||  ||||||||||||||| | | ||||| ||||||||||||||| |||||||| | |||||||||||    
T  43699 aaaacaaggtaaggctgcgtacaatacaccaa--atggtgggacccctttctcggaccctgcatatgcgggagctctagtgcactgagttgccctttt 43794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 59007 - 59114
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||| |||||    
T  59007 cctcttgtataaaaaacagggtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggt 59106  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  59107 tgcccttt 59114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 48737 - 48633
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  48737 cctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 48642  T
Q  104 tgccctttt 112  Q
    |||||||||    
T  48641 tgccctttt 48633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10837 - 10946
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||  |||||||||||||||||| ||||| || ||||||||||||||||||||| |    
T  10837 caacctcttgtgtaaaaaacagggtagggctgcgtccaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcactg 10934  T
Q  101 ggttgccctttt 112  Q
    |||||| |||||    
T  10935 ggttgctctttt 10946  T

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Target: scaffold0168 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 30609 - 30714
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  ||||||| |||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  30609 cctcttgtgtaaaa--cagggtagggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggt 30704  T
Q  104 tgcccttttt 113  Q
    ||||||||||    
T  30705 tgcccttttt 30714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 13118 - 13021
Alignment:
Q  15 aaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttta 114  Q
    ||||||| ||||||||||| ||||||||||| |  |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  13118 aaaaacaaggtaaggctgcgtacaatacaccga--atggtgggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgcccttttta 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1693 - 1591
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccg 100  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||  ||| |||||||||||||| ||||| || ||||||||||||||||||||||     
T  1693 caacctcttgtgtaaaa--caggataaggctgcatacaatacaccaa--atgatgggaccccttcccggacccggcgtatgcgggagctttagtgcacca 1598  T
Q  101 ggttgcc 107  Q
    |||||||    
T  1597 ggttgcc 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 24220 - 24131
Alignment:
Q  22 gggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    |||||||||||| |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||    
T  24220 gggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgcccttttt 24131  T

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Target: scaffold0018 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 72971 - 72867
Alignment:
Q  5 ctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggtt 104  Q
    ||||||||||||||||| ||||||||||| |||||||||||||  ||||| | |||||||||| || || || |||||||||||||||||||||| ||||    
T  72971 ctcttgtgtaaaaaacacggtaaggctgcctacaatacaccaa--atggtagtaccccttcccggaacctgcgtatgcgggagctttagtgcaccaggtt 72874  T
Q  105 gcccttt 111  Q
    |||||||    
T  72873 gcccttt 72867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 11161 - 11264
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| | ||  ||||||||| |||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||| ||||||||| |||    
T  11161 cctcttgtgtaaaacaaag--taaggctgcttacaatacaccaa--atggtgggacaccttcccggaccctgcatatgcgggagctctagtgcaccaggt 11256  T
Q  104 tgcccttt 111  Q
    ||||||||    
T  11257 tgcccttt 11264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 10153 - 10052
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  ||| ||||| |||| |||||||||||||  || ||||||||||||||| ||||| |||||||| ||||||  ||||||||||||    
T  10153 cctcttgtgtaaaa--cagagtaagactgcgtacaatacaccaa--atagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggt 10058  T
Q  104 tgccct 109  Q
    ||||||    
T  10057 tgccct 10052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 20481 - 20380
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    ||||||||||||||  ||| ||||| |||| |||||||||||||  || ||||||||||||||| ||||| |||||||| ||||||  ||||||||||||    
T  20481 cctcttgtgtaaaa--cagagtaagactgcgtacaatacaccaa--atagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggt 20386  T
Q  104 tgccct 109  Q
    ||||||    
T  20385 tgccct 20380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4184 - 4257
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataa-tggtgggaccccttcccagaccc 73  Q
    ||||||||||||||||| ||||| ||||| ||| |||||||||||||||| ||||||||||||||||| |||||    
T  4184 caacctcttgtgtaaaatacaggataaggttgcgtacaatacaccaataattggtgggaccccttcccggaccc 4257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 3574 - 3679
Alignment:
Q  4 cctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggt 103  Q
    |||||||||||||| | | ||||||||||| || |||||||| |  ||| ||||||||||||||  |||| || ||||||| ||||||||||||||| ||    
T  3574 cctcttgtgtaaaatataaggtaaggctgcgtataatacaccga--atgatgggaccccttcccgaaccctgcgtatgcggcagctttagtgcaccgagt 3671  T
Q  104 tgcccttt 111  Q
    | ||||||    
T  3672 ttcccttt 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23626 - 23695
Alignment:
Q  1 caacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcccagacc 72  Q
    ||||||||||||||||||||||||| ||||||| ||||||  | ||  ||||||||||||||||||||||||    
T  23626 caacctcttgtgtaaaaaacagggtgaggctgcgtacaatgtagca--aatggtgggaccccttcccagacc 23695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 35110 - 35062
Alignment:
Q  16 aaaacagggtaaggctgcatacaatacaccaataatggtgggaccccttcc 66  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||| ||||    
T  35110 aaaacagggtaaggctgcgtacaatacacca--aatggtgggaccctttcc 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 32958 - 33016
Alignment:
Q  2 aacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaataatggtgggaccc 61  Q
    |||||||| |||||||||||| ||||| ||| |||||||||||||| | |||||||||||    
T  32958 aacctcttctgtaaaaaacagagtaagactgtatacaatacaccaa-attggtgggaccc 33016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 226500 - 226456
Alignment:
Q  14 aaaaaacagggtaaggctgcatacaatacaccaataatggtgggacc 60  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||    
T  226500 aaaaaacagggtaaggctgcatacaatacatca--aatggtgggacc 226456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 24696 - 24785
Alignment:
Q  22 gggtaaggctgcatacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 113  Q
    ||||||| |||| || ||||||||||  || ||||  |||||| |||||||| || ||| ||||||||| |||||||| | |||||||||||    
T  24696 gggtaagactgcgtataatacaccaa--atagtggaccccctttccagaccctgcgtatacgggagcttcagtgcacctgattgcccttttt 24785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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