View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2795_high_9 (Length: 274)
Name: NF2795_high_9
Description: NF2795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2795_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23856097 - 23856190
Alignment:
| Q |
1 |
tattatagtgcgagactctgaacttctaatgaaatttgtacaagtacttgtgtgttggtgagttattgtttgtttggattaagttcaaatggaa |
94 |
Q |
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| T |
23856097 |
tattatagcgcgagactctgaacttgtaatgaaatttgtacaagtacttgtgtgttggtgagttattgtttgtttggattaagttcaaatggaa |
23856190 |
T |
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Target: chr7; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 23856205 - 23856294
Alignment:
| Q |
169 |
taacgccattcaatgtgatgaatcaaaagcttgtaatatgctgctttaatcaatcaattaaagacgaatgtgttccctataactcttctg |
258 |
Q |
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| T |
23856205 |
taacgccattcaatgtgatgaatcaaaagcttgtaatatgttgctttaatcaatcaattaaagacggatgtgttccctataactcttctg |
23856294 |
T |
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