View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2795_low_13 (Length: 292)
Name: NF2795_low_13
Description: NF2795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2795_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 55301651 - 55301406
Alignment:
| Q |
1 |
ctatatacacagacataaacatgctaaaaatagtagaatacaaggacaagattgatgaatgaatatacctgcactccgtcagcgccaaatacctcccgaa |
100 |
Q |
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| T |
55301651 |
ctatatacacagacataaacatgctaaaaatagtagaatacaaggacaagattgatgaatgaatatacctgcactccgtcagcgccaaatacctcccgaa |
55301552 |
T |
|
| Q |
101 |
gcatagcccgtatcatggatctctttcctacatttgggggtccttcaaatataaaatgattacagccacacccacctttaacctatatacgcagcaatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55301551 |
gcatagcccgtatcatggatctctttcctacatttgggggtccttcaaatataaaatgattacagccacacccacctttaacctatatacgcagcaatta |
55301452 |
T |
|
| Q |
201 |
caaaagaaattatattacctatgttgggcatgcagttgtgatcttg |
246 |
Q |
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| T |
55301451 |
caaaagaaattatattacctatgttgggcatgcagttgtgatcttg |
55301406 |
T |
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