View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2795_low_16 (Length: 261)
Name: NF2795_low_16
Description: NF2795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2795_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 34472492 - 34472727
Alignment:
| Q |
18 |
tgcaaagaaaagaaaacaataatgaaataagagggtacaagatgaattcatacatgagtagggtgaatacaatcacaaagcacatgcagaaaaatcttat |
117 |
Q |
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| T |
34472492 |
tgcaaagaaaagaaatcaataacgaaataagagggtacaagatgaattcatgcatgagtagggtgtatacaatcacaaagcacatgcagaaaaatcttat |
34472591 |
T |
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| Q |
118 |
ctgcattgtgatattaagggaagttaggagatatccgaactcacatttgttcctgcaaaaattaacggttataaaaccttcaagattaagaactccccta |
217 |
Q |
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| T |
34472592 |
ctacattgtgatattaagggaagttaggagatatccgaactcacatttgttcctgcaaaaattaacagttataaaaccttcaagattaagaactccccta |
34472691 |
T |
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| Q |
218 |
ggaaattacggggttgtaatcagagaagagagttat |
253 |
Q |
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| T |
34472692 |
ggaaattagggggttgtaatcagagaagagagttat |
34472727 |
T |
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