View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2797_high_17 (Length: 257)
Name: NF2797_high_17
Description: NF2797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2797_high_17 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 14597200 - 14597446
Alignment:
| Q |
11 |
cacaggttctgctactgtaggagcatcgagtggttcacgaggtttcctaagaacacctcctggacgtccatacctgacgttaggatgatctgcaagaggg |
110 |
Q |
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| T |
14597200 |
cacagattctgctactgtaggagcatcgagtggttcacgaggtttcctaagaacacctcctggacgtccatacctgacgttaggatgatctgcaagaggg |
14597299 |
T |
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| Q |
111 |
cgaccttggaactcagcgactggtatgctatcagccaacatggatgaattaccgaatcgcttgggcaacaagtttgaatctaaatcttgatcaaactcac |
210 |
Q |
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| T |
14597300 |
cgaccttggaactcagcgactggtatgctatcagccaacatggatgaattaccaaatcgcttgggcaacaagtttgaatctaaatcttgatcaaactcac |
14597399 |
T |
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| Q |
211 |
tggcattcaaggccggtgtagtttcacagacttcatccgtacattca |
257 |
Q |
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| T |
14597400 |
tggcattcaaggccggtgtagtttcacagacttcatccgtacattca |
14597446 |
T |
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