View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2797_low_13 (Length: 441)

Name: NF2797_low_13
Description: NF2797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2797_low_13
NF2797_low_13
[»] chr3 (44 HSPs)
chr3 (18-345)||(36868185-36868512)
chr3 (20-129)||(36851686-36851794)
chr3 (365-433)||(36868558-36868626)
chr3 (20-141)||(37371192-37371312)
chr3 (20-141)||(36862138-36862258)
chr3 (268-336)||(50960844-50960912)
chr3 (226-336)||(21200553-21200661)
chr3 (269-336)||(49503766-49503833)
chr3 (268-336)||(39600892-39600960)
chr3 (268-336)||(54128381-54128449)
chr3 (268-336)||(52138803-52138871)
chr3 (268-323)||(39235154-39235209)
chr3 (262-336)||(26490318-26490392)
chr3 (280-337)||(29817506-29817563)
chr3 (271-336)||(41842725-41842790)
chr3 (377-433)||(27917490-27917546)
chr3 (373-429)||(29919226-29919282)
chr3 (373-429)||(29928586-29928642)
chr3 (373-429)||(29968379-29968435)
chr3 (373-429)||(29977740-29977796)
chr3 (268-336)||(38430851-38430919)
chr3 (268-335)||(42510227-42510292)
chr3 (268-336)||(43694976-43695044)
chr3 (373-433)||(49841529-49841589)
chr3 (269-336)||(5168835-5168902)
chr3 (269-336)||(36820173-36820240)
chr3 (395-430)||(44395346-44395381)
chr3 (273-324)||(45289307-45289358)
chr3 (269-336)||(47233808-47233875)
chr3 (270-332)||(3987054-3987116)
chr3 (268-334)||(19737002-19737068)
chr3 (268-334)||(19757905-19757971)
chr3 (395-433)||(46568034-46568072)
chr3 (271-317)||(48734349-48734395)
chr3 (270-336)||(49841622-49841688)
chr3 (274-336)||(54365194-54365255)
chr3 (376-429)||(40562520-40562573)
chr3 (271-336)||(51447924-51447989)
chr3 (377-429)||(26490239-26490291)
chr3 (288-336)||(34719303-34719351)
chr3 (373-433)||(36820263-36820323)
chr3 (268-336)||(38060434-38060502)
chr3 (373-429)||(45236778-45236834)
chr3 (373-433)||(45728064-45728124)
[»] chr7 (64 HSPs)
chr7 (20-138)||(17615648-17615765)
chr7 (269-336)||(12966025-12966092)
chr7 (273-333)||(7189442-7189502)
chr7 (272-336)||(42187473-42187537)
chr7 (274-336)||(38920797-38920859)
chr7 (270-336)||(40169652-40169718)
chr7 (261-323)||(41948532-41948594)
chr7 (270-336)||(47848677-47848743)
chr7 (271-336)||(27021906-27021971)
chr7 (271-336)||(28020967-28021032)
chr7 (268-336)||(19262644-19262712)
chr7 (373-433)||(30200263-30200323)
chr7 (268-336)||(36101976-36102044)
chr7 (260-336)||(36514410-36514486)
chr7 (269-336)||(12841487-12841554)
chr7 (269-336)||(13859220-13859287)
chr7 (269-336)||(34869423-34869490)
chr7 (269-336)||(35906413-35906480)
chr7 (269-336)||(49029279-49029346)
chr7 (395-433)||(5335840-5335878)
chr7 (271-336)||(2885936-2886001)
chr7 (269-318)||(24549905-24549954)
chr7 (270-315)||(35713719-35713764)
chr7 (270-314)||(6420703-6420747)
chr7 (268-332)||(7273046-7273110)
chr7 (268-336)||(28628144-28628212)
chr7 (268-332)||(30200174-30200238)
chr7 (269-336)||(6374871-6374938)
chr7 (270-333)||(7220750-7220813)
chr7 (269-336)||(11593963-11594030)
chr7 (269-336)||(22349623-22349690)
chr7 (269-336)||(31005226-31005293)
chr7 (269-336)||(33072955-33073022)
chr7 (269-336)||(39906582-39906649)
chr7 (269-336)||(43281677-43281744)
chr7 (269-336)||(45836692-45836759)
chr7 (241-336)||(46989906-46990001)
chr7 (395-433)||(14593679-14593717)
chr7 (395-433)||(16013202-16013240)
chr7 (270-336)||(18605359-18605425)
chr7 (270-336)||(18637565-18637631)
chr7 (270-336)||(18650999-18651065)
chr7 (395-433)||(24550013-24550051)
chr7 (270-336)||(25579290-25579356)
chr7 (395-433)||(36514531-36514569)
chr7 (395-433)||(36869615-36869653)
chr7 (374-432)||(40139221-40139279)
chr7 (270-336)||(43282411-43282477)
chr7 (269-331)||(44855384-44855446)
chr7 (270-336)||(46356069-46356135)
chr7 (395-429)||(47848596-47848630)
chr7 (269-318)||(38135424-38135473)
chr7 (234-315)||(48202879-48202960)
chr7 (373-426)||(48736203-48736256)
chr7 (373-433)||(1740715-1740775)
chr7 (260-336)||(5335923-5335999)
chr7 (260-332)||(14593772-14593844)
chr7 (288-336)||(26742127-26742175)
chr7 (269-333)||(33350018-33350082)
chr7 (268-336)||(36136767-36136835)
chr7 (377-433)||(37617862-37617918)
chr7 (269-336)||(37617947-37618015)
chr7 (268-336)||(40830226-40830294)
chr7 (373-429)||(42187393-42187448)
[»] chr4 (46 HSPs)
chr4 (268-335)||(29398822-29398889)
chr4 (271-336)||(31459033-31459098)
chr4 (260-329)||(42285903-42285972)
chr4 (261-334)||(46715576-46715649)
chr4 (260-336)||(35555850-35555926)
chr4 (260-336)||(51252664-51252740)
chr4 (270-332)||(50662394-50662457)
chr4 (270-336)||(28236186-28236252)
chr4 (270-336)||(54470210-54470276)
chr4 (260-333)||(42639223-42639296)
chr4 (268-324)||(47611742-47611798)
chr4 (241-336)||(31339540-31339634)
chr4 (269-336)||(31960026-31960093)
chr4 (269-336)||(43433927-43433994)
chr4 (269-336)||(52569727-52569794)
chr4 (269-336)||(53707797-53707864)
chr4 (260-334)||(38570950-38571024)
chr4 (270-323)||(30853373-30853426)
chr4 (268-336)||(436232-436300)
chr4 (373-429)||(20105775-20105831)
chr4 (260-332)||(33709931-33710003)
chr4 (288-336)||(38266149-38266197)
chr4 (268-336)||(41192839-41192907)
chr4 (271-323)||(44860862-44860914)
chr4 (373-433)||(49987346-49987406)
chr4 (280-332)||(49987435-49987487)
chr4 (268-324)||(50471541-50471597)
chr4 (269-336)||(33227212-33227279)
chr4 (269-336)||(48622755-48622822)
chr4 (270-336)||(1793463-1793529)
chr4 (270-336)||(20591513-20591579)
chr4 (270-336)||(28497493-28497558)
chr4 (395-433)||(44860772-44860810)
chr4 (269-334)||(4440858-4440923)
chr4 (271-336)||(30621418-30621483)
chr4 (271-336)||(37797855-37797920)
chr4 (395-428)||(40933222-40933255)
chr4 (268-336)||(10209037-10209105)
chr4 (261-301)||(13805469-13805509)
chr4 (268-336)||(31403229-31403295)
chr4 (373-433)||(31403324-31403384)
chr4 (280-336)||(42293472-42293528)
chr4 (159-219)||(44641936-44641996)
chr4 (159-203)||(44686700-44686744)
chr4 (377-429)||(45205156-45205208)
chr4 (377-433)||(56375208-56375264)
[»] scaffold0018 (2 HSPs)
scaffold0018 (267-336)||(44078-44147)
scaffold0018 (269-336)||(31471-31538)
[»] chr1 (39 HSPs)
chr1 (268-336)||(5338727-5338795)
chr1 (268-336)||(27848016-27848084)
chr1 (270-336)||(48431619-48431685)
chr1 (268-336)||(35828761-35828829)
chr1 (269-336)||(34792561-34792628)
chr1 (270-332)||(43423726-43423788)
chr1 (275-336)||(14226047-14226108)
chr1 (271-336)||(40416374-40416439)
chr1 (268-336)||(1661433-1661501)
chr1 (268-336)||(2544602-2544670)
chr1 (260-336)||(3819059-3819135)
chr1 (373-429)||(4379927-4379983)
chr1 (377-433)||(9599702-9599758)
chr1 (373-433)||(52442808-52442868)
chr1 (269-336)||(1210748-1210815)
chr1 (261-324)||(8343062-8343125)
chr1 (269-336)||(9509321-9509388)
chr1 (273-336)||(38868885-38868948)
chr1 (269-336)||(51602059-51602126)
chr1 (268-334)||(13827928-13827994)
chr1 (271-336)||(8671921-8671986)
chr1 (373-433)||(9509236-9509296)
chr1 (268-332)||(32404737-32404801)
chr1 (373-429)||(34827406-34827462)
chr1 (269-336)||(15085937-15086004)
chr1 (269-336)||(22090099-22090166)
chr1 (261-336)||(23791848-23791923)
chr1 (370-433)||(26016355-26016418)
chr1 (269-336)||(39140523-39140590)
chr1 (269-332)||(51440977-51441040)
chr1 (268-318)||(10569278-10569328)
chr1 (270-336)||(32231167-32231233)
chr1 (271-336)||(4380016-4380081)
chr1 (268-337)||(36340014-36340083)
chr1 (373-433)||(1661344-1661404)
chr1 (268-324)||(16822233-16822289)
chr1 (274-318)||(17815493-17815537)
chr1 (268-336)||(19908250-19908318)
chr1 (273-329)||(51812535-51812591)
[»] chr8 (31 HSPs)
chr8 (241-336)||(29700279-29700374)
chr8 (272-336)||(9695634-9695698)
chr8 (270-324)||(35643814-35643868)
chr8 (273-334)||(13171865-13171926)
chr8 (271-336)||(45512709-45512774)
chr8 (269-336)||(12491350-12491417)
chr8 (270-336)||(18474173-18474239)
chr8 (270-324)||(41971991-41972045)
chr8 (268-301)||(79081-79114)
chr8 (261-337)||(12611537-12611613)
chr8 (272-324)||(16917199-16917251)
chr8 (393-433)||(30456535-30456575)
chr8 (268-324)||(30748472-30748528)
chr8 (280-336)||(41444549-41444605)
chr8 (268-336)||(45419240-45419308)
chr8 (269-336)||(2776441-2776508)
chr8 (373-428)||(28300416-28300471)
chr8 (374-433)||(36143287-36143346)
chr8 (269-332)||(36545156-36545219)
chr8 (273-336)||(36565457-36565520)
chr8 (159-201)||(16917293-16917335)
chr8 (374-424)||(36069570-36069620)
chr8 (395-433)||(36545065-36545103)
chr8 (399-433)||(39760754-39760788)
chr8 (268-336)||(36395160-36395229)
chr8 (271-336)||(40813327-40813392)
chr8 (268-336)||(43904876-43904947)
chr8 (268-324)||(17491832-17491888)
chr8 (268-336)||(36143368-36143436)
chr8 (268-336)||(39946860-39946928)
chr8 (268-336)||(44681250-44681318)
[»] chr5 (32 HSPs)
chr5 (261-336)||(33667219-33667294)
chr5 (269-336)||(31636132-31636199)
chr5 (266-336)||(28676598-28676668)
chr5 (226-324)||(42199301-42199399)
chr5 (270-336)||(43558040-43558106)
chr5 (268-336)||(43475243-43475311)
chr5 (269-336)||(4496387-4496454)
chr5 (373-428)||(21952274-21952329)
chr5 (268-336)||(41833793-41833863)
chr5 (270-336)||(1287792-1287858)
chr5 (271-336)||(1275267-1275332)
chr5 (271-336)||(15489706-15489771)
chr5 (268-336)||(18351118-18351187)
chr5 (260-336)||(2712947-2713023)
chr5 (268-336)||(34273030-34273098)
chr5 (269-336)||(14665717-14665784)
chr5 (269-336)||(16347590-16347657)
chr5 (269-336)||(24178513-24178580)
chr5 (269-336)||(28977071-28977138)
chr5 (269-336)||(38684970-38685037)
chr5 (286-336)||(14667766-14667816)
chr5 (157-218)||(3775195-3775256)
chr5 (261-318)||(6889014-6889071)
chr5 (373-410)||(8492627-8492664)
chr5 (260-337)||(14749309-14749386)
chr5 (288-336)||(27896-27944)
chr5 (268-336)||(79516-79584)
chr5 (260-336)||(6859384-6859460)
chr5 (269-329)||(12492596-12492656)
chr5 (275-327)||(21193858-21193910)
chr5 (395-431)||(27998343-27998379)
chr5 (270-318)||(38578734-38578782)
[»] chr2 (30 HSPs)
chr2 (262-336)||(8180783-8180857)
chr2 (270-328)||(13240958-13241016)
chr2 (268-336)||(12141547-12141615)
chr2 (280-336)||(19024183-19024239)
chr2 (269-336)||(43238305-43238372)
chr2 (262-336)||(25834684-25834758)
chr2 (287-336)||(18958910-18958959)
chr2 (260-309)||(42543265-42543314)
chr2 (373-433)||(7825276-7825336)
chr2 (373-425)||(9556672-9556724)
chr2 (373-433)||(9647909-9647969)
chr2 (268-336)||(43752158-43752226)
chr2 (269-336)||(11992320-11992387)
chr2 (269-336)||(36183454-36183521)
chr2 (270-336)||(38434954-38435021)
chr2 (269-336)||(38452897-38452964)
chr2 (269-336)||(45367837-45367904)
chr2 (270-336)||(2610591-2610657)
chr2 (268-318)||(3481162-3481212)
chr2 (395-433)||(8180698-8180736)
chr2 (270-331)||(14197375-14197437)
chr2 (270-315)||(9556582-9556627)
chr2 (283-336)||(11412724-11412777)
chr2 (268-316)||(12026216-12026264)
chr2 (373-429)||(12734623-12734679)
chr2 (373-424)||(37393470-37393522)
chr2 (268-332)||(41763253-41763317)
chr2 (373-433)||(41779610-41779670)
chr2 (373-433)||(42092437-42092497)
chr2 (373-429)||(45077670-45077726)
[»] chr6 (18 HSPs)
chr6 (268-336)||(33084061-33084129)
chr6 (268-336)||(14389379-14389446)
chr6 (270-324)||(9593919-9593973)
chr6 (165-219)||(21870201-21870255)
chr6 (157-219)||(31818623-31818685)
chr6 (280-316)||(33997765-33997801)
chr6 (269-336)||(5258360-5258427)
chr6 (378-433)||(6293678-6293733)
chr6 (268-331)||(24665818-24665881)
chr6 (269-336)||(28085379-28085446)
chr6 (396-430)||(5129164-5129198)
chr6 (395-433)||(32755837-32755875)
chr6 (271-336)||(2079343-2079408)
chr6 (275-324)||(4948529-4948578)
chr6 (275-324)||(4955500-4955549)
chr6 (280-336)||(8364575-8364631)
chr6 (397-429)||(26291700-26291732)
chr6 (373-433)||(33998308-33998368)
[»] scaffold0325 (1 HSPs)
scaffold0325 (271-335)||(11802-11866)
[»] scaffold0570 (1 HSPs)
scaffold0570 (269-336)||(1160-1227)


Alignment Details
Target: chr3 (Bit Score: 316; Significance: 1e-178; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 345
Target Start/End: Original strand, 36868185 - 36868512
Alignment:
Q  18 aaaacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36868185 aaaacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcc 36868284  T
Q  118 ttgacttgattaacttgttttatttaaccaaaaccaagccttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatcta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36868285 ttgacttgattaacttgttttatttaaccaaaaccaagccttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatcta 36868384  T
Q  218 ctattttaactactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatct 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  36868385 ctattttaactactgtccatattatctactatccttacggctgaatccaaaggtcttctttatatatgcccaaaccacctaagcctactttccaccatct 36868484  T
Q  318 tctctaccataggtgctacataccccaa 345  Q
    ||||||||||||||||||||||||||||    
T  36868485 tctctaccataggtgctacataccccaa 36868512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 36851686 - 36851794
Alignment:
Q  20 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 119  Q
    ||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||| ||| |||||| ||||||| ||||||||||||||||||| |||    
T  36851686 aacaaagaggaactccttgccatggcaaagggacatcaactcaagaaaggtttgctt-cttgatgatcgaaatcacaatttgtggagattttgcatgctt 36851784  T
Q  120 gacttgatta 129  Q
    ||||||||||    
T  36851785 gacttgatta 36851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 365 - 433
Target Start/End: Original strand, 36868558 - 36868626
Alignment:
Q  365 atgatattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36868558 atgatattatttctaatcatatctcgcctggtcttaccacaaattcaacacaacatcctcatctctgct 36868626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 37371312 - 37371192
Alignment:
Q  20 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 119  Q
    ||||||||||||||| ||||||||||||||||| || || |||| |||||||||||| ||||||||||||||| ||  |||||| ||||||||||| |||    
T  37371312 aacaaagaggaactccttgccatggcaaagggaaatcaagtcaagaaaggtttgctt-cttaatgatctaaattacagtttgtgtagattttgcatgctt 37371214  T
Q  120 gacttgattaacttgttttatt 141  Q
    || ||| |||  ||||||||||    
T  37371213 gaattggttactttgttttatt 37371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 36862138 - 36862258
Alignment:
Q  20 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 119  Q
    |||||||||||||||  |||||||| |||| ||||| ||||||| |||||||||||| ||| |||||||||||||| ||  ||||| | | ||||| |||    
T  36862138 aacaaagaggaactccgtgccatgggaaagcgagatcaactcaagaaaggtttgctt-ctttatgatctaaatcacaatgcgtggacactatgcatgctt 36862236  T
Q  120 gacttgattaacttgttttatt 141  Q
    ||||||||||  ||||||||||    
T  36862237 gacttgattactttgttttatt 36862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 50960844 - 50960912
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  50960844 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 50960912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 226 - 336
Target Start/End: Complemental strand, 21200661 - 21200553
Alignment:
Q  226 actactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctacc 325  Q
    |||||| ||||| | ||||||| ||||||| || ||||| | | ||||||||| |||||||||||||||||||||  || ||||||||||||| |||||     
T  21200661 actactctccatgtgatctactctccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac- 21200563  T
Q  326 ataggtgctac 336  Q
     ||||||||||    
T  21200562 -taggtgctac 21200553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 49503766 - 49503833
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 49503833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 39600892 - 39600960
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||||| |||||||||||||||  ||||||||||||| ||||| |||||| ||||    
T  39600892 aggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactac 39600960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 54128449 - 54128381
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| ||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  54128449 aggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 54128381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 52138871 - 52138803
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  52138871 aggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 52138803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 323
Target Start/End: Complemental strand, 39235209 - 39235154
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 323  Q
    ||||||||||| |||||||||||||||||||||| || |||| |||||||| ||||    
T  39235209 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 26490392 - 26490318
Alignment:
Q  262 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||| |||||| | | |||||| ||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  26490392 atccaacggtcttttatctacatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctac 26490318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 29817563 - 29817506
Alignment:
Q  280 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 337  Q
    |||||| ||||||||||||| ||||||||| || ||||| ||||| ||||||||||||    
T  29817563 tacatgtccaaaccacctaaacttactttctacaatcttttctactataggtgctaca 29817506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 41842725 - 41842790
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||| |||||||||||||||  |  ||||||||||||| ||||| |||||||||||    
T  41842725 tcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtgctac 41842790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 27917546 - 27917490
Alignment:
Q  377 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||| |||||| || | |||||||| ||| ||||||||||||||||||||||||    
T  27917546 ctaatcaaatctcgtctaggcttaccactcatccaacacaacatcctcatctctgct 27917490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 29919282 - 29919226
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29919282 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29919226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 29928586 - 29928642
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29928586 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29928642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 29968435 - 29968379
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29968435 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29968379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 29977740 - 29977796
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29977740 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29977796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 38430919 - 38430851
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||| ||||| ||||||||||| | |||||||| || |||| |||||||| ||||| |||||||||||    
T  38430919 aggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgctac 38430851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 42510227 - 42510292
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 335  Q
    ||||||||||||  |||| ||||||||||||||| || ||||||| ||||| ||||| ||||||||||    
T  42510227 aggtcttctcta--catgtccaaaccacctaagcctattttccactatcttttctactataggtgcta 42510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 43694976 - 43695044
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||||||||||||| ||||||  | |||| |||| ||| ||||| |||||||||||    
T  43694976 aggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactataggtgctac 43695044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 49841589 - 49841529
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| || |||| || ||||||| |||||| ||||||||||||||||||| ||||    
T  49841589 atttctaatcttacctcgtctagtcttactacacatccaacacaacatcctcatctatgct 49841529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 5168902 - 5168835
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||  ||||||| |||||| || |||| |||| ||| |||||||||||||||||    
T  5168902 ggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgctac 5168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 36820173 - 36820240
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| | ||||||||||||| || |||||||||||||  |||  |||||||||||    
T  36820173 ggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctac 36820240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 430
Target Start/End: Complemental strand, 44395381 - 44395346
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctct 430  Q
    |||||||||||||||||||||||| |||||||||||    
T  44395381 gtcttaccacacattcaacacaacttcctcatctct 44395346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 45289307 - 45289358
Alignment:
Q  273 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    |||||| ||| |||||||||||||||||| || ||||||||||||| |||||    
T  45289307 ttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctac 45289358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 47233808 - 47233875
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  47233808 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 47233875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 3987116 - 3987054
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||||| ||||| |||||||||||||||  || |||| |||||||| ||||| |||||||    
T  3987116 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtg 3987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 19737068 - 19737002
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 334  Q
    ||||||||||| | ||||| |||||||||||| | || |||| |||||||| ||||| |||||||||    
T  19737068 aggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgct 19737002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 19757971 - 19757905
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 334  Q
    ||||||||||| | ||||| |||||||||||| | || |||| |||||||| ||||| |||||||||    
T  19757971 aggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgct 19757905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 46568072 - 46568034
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  46568072 gtcttaacacacatccaacacaacatcctcatctctgct 46568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 317
Target Start/End: Original strand, 48734349 - 48734395
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatct 317  Q
    |||||||| |||||||||||||||||||||| || |||| |||||||    
T  48734349 tcttctctctacatgcccaaaccacctaagcctattttctaccatct 48734395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 49841688 - 49841622
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| |||| ||||||||||||| ||  || ||||||||||||| ||||  |||||||||||    
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgctac 49841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 54365194 - 54365255
Alignment:
Q  274 tctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||| |||||||||||||||||||||| || ||||| |||| || ||||| |||||||||||    
T  54365194 tctctctacatgcccaaaccacctaagc-tattttccgccatattttctactataggtgctac 54365255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 40562520 - 40562573
Alignment:
Q  376 tctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||| |||||| ||| || ||||||||||||||| ||||||||||| |||||||    
T  40562520 tctattcatatttcgtctagtcttaccacacatttaacacaacatcgtcatctc 40562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 51447924 - 51447989
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||||||||| | |||||| || |||| |||| ||| ||||| |||||||||||    
T  51447924 tcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctac 51447989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 26490291 - 26490239
Alignment:
Q  377 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    ||||||||||| || || |||||||||| ||| |||| |||||||||||||||    
T  26490291 ctaatcatatcccgtcttgtcttaccactcatccaacgcaacatcctcatctc 26490239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 34719303 - 34719351
Alignment:
Q  288 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||| |||||||| | ||||||||||||||| ||||| |||||||||||    
T  34719303 caaaacacctaagttgactttccaccatcttttctacgataggtgctac 34719351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 36820263 - 36820323
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||||||| || |||||||||||||| |||| ||||| ||| |||| ||||    
T  36820263 atttctaatcctatctcgtctagtcttaccacacatccaacgcaacaaccttatctttgct 36820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 38060502 - 38060434
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||  |||||||||||    
T  38060502 aggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctac 38060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 45236834 - 45236778
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||||||||  | || |||||||||||||| |||| ||||||||| |||||    
T  45236834 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 45236778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 45728124 - 45728064
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||| ||| || |||||||||| ||| || | |||||||||||||||||||    
T  45728124 atttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgct 45728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 17615765 - 17615648
Alignment:
Q  20 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 119  Q
    ||||||||||||||| ||||||||| ||||||| || |  |||| |||||||||||| |||||||||||||||||| ||||||| ||||||| ||| |||    
T  17615765 aacaaagaggaactccttgccatggaaaagggaaatcatgtcaagaaaggtttgctt-cttaatgatctaaatcacaatttgtgtagatttttcatgctt 17615667  T
Q  120 gacttgattaacttgtttt 138  Q
    || ||| |||  |||||||    
T  17615666 gaattggttactttgtttt 17615648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 12966092 - 12966025
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||| ||| | |||||||||||    
T  12966092 ggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctac 12966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 7189442 - 7189502
Alignment:
Q  273 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 333  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgc 7189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 42187537 - 42187473
Alignment:
Q  272 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||| ||||  |||||||||||    
T  42187537 cttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctac 42187473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 38920859 - 38920797
Alignment:
Q  274 tctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||| |||||||||||||||| ||||| || ||||||||||||| ||||| |||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctac 38920797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 40169718 - 40169652
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||| ||| |||||||||||||||||||||| || ||||||||||||| ||||| ||| |||||||    
T  40169718 gtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctac 40169652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 41948594 - 41948532
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 323  Q
    |||||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||||    
T  41948594 aatccagaggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttcta 41948532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 47848743 - 47848677
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||  ||||||||||||||||||||| || ||||||||||||| ||||| ||||| |||||    
T  47848743 gtcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctac 47848677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 27021906 - 27021971
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| |||||||||||||||||||||| || ||| ||||| ||| ||||| |||||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctac 27021971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 28021032 - 28020967
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||| ||||| ||| |||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctac 28020967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 19262644 - 19262712
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||||| ||||||||||||||  | |||| |||||||| ||||| |||||||||||    
T  19262644 aggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgctac 19262712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 30200263 - 30200323
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||||||||||| |  ||  ||||||||||||| ||||||||||||||||||||||||    
T  30200263 atttctaatcatatcccatctaatcttaccacacatccaacacaacatcctcatctctgct 30200323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 36101976 - 36102044
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||| |||||||||||||||| || |||||| |||||| ||||  |||||||||||    
T  36101976 aggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctac 36102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 36514410 - 36514486
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| | ||| ||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  36514410 gaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 36514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 12841487 - 12841554
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  12841487 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 12841554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 13859220 - 13859287
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  13859220 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 13859287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 34869490 - 34869423
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  34869490 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 34869423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 35906413 - 35906480
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  35906413 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 35906480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 49029346 - 49029279
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  49029346 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 49029279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 5335878 - 5335840
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5335878 gtcttaccacacattcaacgcaacatcctcatctctgct 5335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 2885936 - 2886001
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  2885936 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 2886001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 24549905 - 24549954
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 318  Q
    |||||||||| |||||||||||||||||||||| || |||||| ||||||    
T  24549905 ggtcttctctctacatgcccaaaccacctaagcctagtttccatcatctt 24549954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 35713764 - 35713719
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccat 315  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||    
T  35713764 gtcttctctctacatgcccaaaccacctaagcctattttccaccat 35713719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 6420703 - 6420747
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccacca 314  Q
    ||||||||| |||||||||||||||||||||| || |||||||||    
T  6420703 gtcttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 7273110 - 7273046
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  7273110 aggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 28628144 - 28628212
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||| |||||| ||||||||||||||||||||||  | ||||||||||| | |||||  ||||||||||    
T  28628144 aggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctactctaggtgctac 28628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 30200174 - 30200238
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||||| | |||||||| ||| ||||||||| || ||||||||||||| ||||| |||||||    
T  30200174 aggtcttctatttacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtg 30200238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 6374938 - 6374871
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||| ||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  6374938 ggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctac 6374871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 333
Target Start/End: Complemental strand, 7220813 - 7220750
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 333  Q
    ||||||||| ||||||||||||||||||||||  | |||| | |||||| ||||| ||||||||    
T  7220813 gtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtgc 7220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 11594030 - 11593963
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  11594030 ggtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactataggtgctac 11593963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 22349690 - 22349623
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||| |||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  22349690 ggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtgctac 22349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 31005293 - 31005226
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  31005293 ggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 31005226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 33073022 - 33072955
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  33073022 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 33072955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 39906582 - 39906649
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  39906582 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 39906649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 43281744 - 43281677
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43281744 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43281677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 45836692 - 45836759
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  45836692 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 45836759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 46990001 - 46989906
Alignment:
Q  241 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||| ||  |||| | |||||| ||| | |||||||||||||||||||| | |  ||| |||||||| ||||| |||||||||||    
T  46990001 atctactatctttactgcgaaatctataggtctcctccacacatgcccaaaccacctaagatgaaattcaaccatcttttctacaataggtgctac 46989906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 14593717 - 14593679
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  14593717 gtcttaccacacatccaacgcaacatcctcatctctgct 14593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 16013240 - 16013202
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  16013240 gtcttaccacacatccaacgcaacatcctcatctctgct 16013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 18605359 - 18605425
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18605359 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18605425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 18637631 - 18637565
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18637631 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18637565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 18651065 - 18650999
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18651065 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18650999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Original strand, 24550013 - 24550051
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  24550013 gtcttacaacacatccaacacaacatcctcatctctgct 24550051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 25579290 - 25579356
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||| |||||||||||||||| || |||||||||| || ||| | || ||||||||    
T  25579290 gtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgctac 25579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Original strand, 36514531 - 36514569
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  36514531 gtcttaccacacatccaacgcaacatcctcatctctgct 36514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Original strand, 36869615 - 36869653
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  36869615 gtcttaccactcatccaacacaacatcctcatctctgct 36869653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 40139221 - 40139279
Alignment:
Q  374 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgc 432  Q
    ||||||||| |||| || || |||||||||||||| | ||||||||||||| |||||||    
T  40139221 tttctaatcttatcccgtctagtcttaccacacatcccacacaacatcctcgtctctgc 40139279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 43282477 - 43282411
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| |||||||||||  ||||||||| || ||||||||  ||| ||||| |||||||||||    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctac 43282411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 44855384 - 44855446
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggt 331  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||||    
T  44855384 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggt 44855446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 46356069 - 46356135
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  46356069 gtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 46356135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 429
Target Start/End: Complemental strand, 47848630 - 47848596
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||||||| ||||||||||||||||||||    
T  47848630 gtcttaccacacatccaacacaacatcctcatctc 47848596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 38135424 - 38135473
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 318  Q
    |||||||| | |||||| ||||||||||||||| || |||||||||||||    
T  38135424 ggtcttctgtctacatgtccaaaccacctaagcctattttccaccatctt 38135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 315
Target Start/End: Original strand, 48202879 - 48202960
Alignment:
Q  234 ccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccat 315  Q
    |||||| ||||||| |||||||  | ||||| | | ||||||||| ||||||| |||||||||||||| ||  |||||||||    
T  48202879 ccatatgatctactctccttactacagaatctacaagtcttctctctacatgcgcaaaccacctaagcctagattccaccat 48202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 48736203 - 48736256
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcat 426  Q
    |||||||||  ||||||  || ||||||||||||||||||| ||||||||||||    
T  48736203 atttctaattttatctcatctagtcttaccacacattcaacgcaacatcctcat 48736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 1740775 - 1740715
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| || | | ||| ||||||| |||||| |||| |||||||||||||||||||    
T  1740775 atttctaatcttaccccacctagtcttactacacatccaacgcaacatcctcatctctgct 1740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 5335999 - 5335923
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| || |||||||| || ||||||||||||||||||  || |||| ||||||||  |||| |||| ||||||    
T  5335999 gaatccacagttcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgctac 5335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 14593844 - 14593772
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||| ||||||||||  |||||||||||| ||||||||  || |||| ||||| || ||||| |||||||    
T  14593844 gaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 14593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 26742127 - 26742175
Alignment:
Q  288 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||||| | || ||||||||||||| ||||| |||||||||||    
T  26742127 caaaccacctaatcctattttccaccatcttttctactataggtgctac 26742175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 33350018 - 33350082
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 333  Q
    |||||||||| ||||||||||||||| |||||| || |||| | || ||| ||||| ||||||||    
T  33350018 ggtcttctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgc 33350082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 36136835 - 36136767
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||| |||||| || |||||||||| |||||||  || |||| |||||||| ||||| |||||||||||    
T  36136835 aggtattctctctatatgcccaaacaacctaagactattttctaccatcttttctactataggtgctac 36136767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 37617918 - 37617862
Alignment:
Q  377 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||| ||||| | || |||||||||| ||| |||| |||||||||||||||||||    
T  37617918 ctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 37617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 37618015 - 37617947
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagctta-ctttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| ||  |||| |||| ||| ||||| |||||||||||    
T  37618015 ggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgctac 37617947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 40830294 - 40830226
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| | |||||||||||||||||||   | |||| |||||||| ||| | |||||||||||    
T  40830294 aggtcttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtgctac 40830226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 42187448 - 42187393
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    ||||||||| ||||| || || ||||||| |||||| ||||||||||||||||||||    
T  42187448 atttctaat-atatcccgtctagtcttactacacatccaacacaacatcctcatctc 42187393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 29398889 - 29398822
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 335  Q
    ||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||    
T  29398889 aggtcttctctctacatgcccaaaccacataagcatattttccaccatcttttctaccataggtgcta 29398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 31459098 - 31459033
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 31459033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 42285903 - 42285972
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 329  Q
    ||||||| |||||||||||||||||||||||||||||||||  || |||| |||||||| ||||| ||||    
T  42285903 gaatccacaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 46715576 - 46715649
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 334  Q
    |||||| | ||||||||| |||||||||| ||||||||||| || ||||||||||||| ||||| |||||||||    
T  46715576 aatccacatgtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggtgct 46715649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 35555850 - 35555926
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| ||||||||||| || ||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  35555850 gaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 35555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 51252664 - 51252740
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| | ||||||||| |||||||||| ||||||||||| || ||||||||||||| ||||| | |||||||||    
T  51252664 gaatccacatgtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctac 51252740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 50662457 - 50662394
Alignment:
Q  270 gtcttctctatacatgcccaaa-ccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||| ||||| |||||||    
T  50662457 gtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtg 50662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 28236252 - 28236186
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||||||||||| |||||| || ||||||||| ||| ||||| |||||||||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctac 28236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 54470276 - 54470210
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| |||||||||||||||| ||||  || ||||||||||||| ||||| |||||||||||    
T  54470276 gtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctac 54470210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 333
Target Start/End: Original strand, 42639223 - 42639296
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 333  Q
    ||||||| | ||||||||| |||||| ||||||||||||||| |  ||||||||||||| ||||| ||||||||    
T  42639223 gaatccataagtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgc 42639296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 47611798 - 47611742
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||||| |||||||||||||||||||||| || |||||| |||||| |||||    
T  47611798 aggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctac 47611742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 31339634 - 31339540
Alignment:
Q  241 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||||||||  |  |||| | | ||||||||| ||||||| ||||||||||||||||| |||| ||||| || |||||||||||| ||||    
T  31339634 atctactatccttactacataatctacaagtcttctctctacatgctcaaaccacctaagcttagtttcgaccat-ttttctaccataggttctac 31339540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 31960026 - 31960093
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  31960026 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 31960093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 43433994 - 43433927
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43433994 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43433927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 52569727 - 52569794
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  52569727 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 52569794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 53707864 - 53707797
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  53707864 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 53707797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 38570950 - 38571024
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 334  Q
    ||||||| | ||||||| | |||||||||||||||||||||| || ||||||| ||||| | ||| |||||||||    
T  38570950 gaatccacatgtcttctttctacatgcccaaaccacctaagcctagtttccactatcttttgtactataggtgct 38571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 30853426 - 30853373
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 323  Q
    ||||||||| ||||||||||||||||||||||| | ||||||| ||||| ||||    
T  30853426 gtcttctctctacatgcccaaaccacctaagctgagtttccactatcttgtcta 30853373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 436300 - 436232
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  436300 aggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 436232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 20105775 - 20105831
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||||||||||| || |||||||||||||| || | ||||||| |||||||    
T  20105775 atttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctc 20105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 33710003 - 33709931
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||| || ||||||||  ||||||| ||||||||||| | || ||||||||||||| ||||| |||||||    
T  33710003 gaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtg 33709931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 38266197 - 38266149
Alignment:
Q  288 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||||||    
T  38266197 caaaccacctaagcttagtttccaccatcctctctattataggtgctac 38266149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 41192907 - 41192839
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||||| |||| ||||||||  || ||||||||||||| |||||  ||||||||||    
T  41192907 aggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctac 41192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 44860914 - 44860862
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 323  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||||| ||||    
T  44860914 tcttctctatacatgcccaaaccatctaagcctggtttccaccatcttttcta 44860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 49987406 - 49987346
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||||  | || ||||||| | |||||||||||||||||||||||||||||    
T  49987406 atttctaatcctatcatgtctagtcttactaaacattcaacacaacatcctcatctctgct 49987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 49987487 - 49987435
Alignment:
Q  280 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    |||||| ||||||||||||||| || ||||||||||||| ||||| |||||||    
T  49987487 tacatgaccaaaccacctaagcctattttccaccatcttttctactataggtg 49987435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 50471597 - 50471541
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||||| |||||||||||||||| ||| | || ||||||||||||| |||||    
T  50471597 aggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctac 50471541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 33227279 - 33227212
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||| | |||||| || |||| |||| ||| ||||| |||||||||||    
T  33227279 ggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctac 33227212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 48622755 - 48622822
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| || ||||||||    
T  48622755 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctac 48622822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 1793529 - 1793463
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| |||||| |||||||| ||||||||| |||| |||| ||| | ||| |||||||||||    
T  1793529 gtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactataggtgctac 1793463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 20591513 - 20591579
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||||||||||| |||| |||| |||| |||| ||| ||||| ||| |||||||    
T  20591513 gtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctactataagtgctac 20591579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 28497558 - 28497493
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| |||||||||||||||||||||| |  ||||||| ||||| ||||| | |||||||||    
T  28497558 gtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctactaaaggtgctac 28497493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 44860810 - 44860772
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  44860810 gtcttaccacacatccaacacaacatcctcatttctgct 44860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 334
Target Start/End: Complemental strand, 4440923 - 4440858
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 334  Q
    |||||||||| || |||||||||||| |||||| || |||| |||| ||| ||||| |||||||||    
T  4440923 ggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 4440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 30621418 - 30621483
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||| |||||||| ||||||| | || ||||||||||||| ||||| ||| |||||||    
T  30621418 tcttctctctacgtgcccaaatcacctaaacctattttccaccatcttttctactataagtgctac 30621483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 37797920 - 37797855
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  37797920 tcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 37797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 40933222 - 40933255
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatct 428  Q
    ||||||||||||||||||| ||||||||||||||    
T  40933222 gtcttaccacacattcaacgcaacatcctcatct 40933255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 10209105 - 10209037
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||  ||||||||||||||| ||||| ||| ||||  ||||||| ||||| |||||| ||||    
T  10209105 aggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggttctac 10209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 13805469 - 13805509
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagc 301  Q
    |||| ||||||||||||| ||||| ||||||||||||||||    
T  13805469 aatctaaaggtcttctctctacatacccaaaccacctaagc 13805509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 31403229 - 31403295
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||| |||||| ||||||||||| |||||||||| || |||||||||| || ||||| |||||||||||    
T  31403229 aggtgttctctttacatgcccaa-ccacctaagcctagtttccaccat-ttttctactataggtgctac 31403295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 31403324 - 31403384
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| |||| || ||  ||| |||||||||||||| ||||||| |||||||||||    
T  31403324 atttctaatcctatcccgtctaatctcaccacacattcaactcaacatcatcatctctgct 31403384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 42293472 - 42293528
Alignment:
Q  280 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||| ||||||||||||||||  | |||||| |||||| ||||| |||||||||||    
T  42293472 tacatacccaaaccacctaagccgagtttccatcatcttttctactataggtgctac 42293528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 44641936 - 44641996
Alignment:
Q  159 tatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 219  Q
    ||||| ||||| | ||||||||||  |||||||||||| |||||||||||| | |||||||    
T  44641936 tatagtttttcgaagtcttcttctgtctttagtgatttgactactctccatttgatctact 44641996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 44686700 - 44686744
Alignment:
Q  159 tatagcttttcaaggtcttcttctacctttagtgatttaactact 203  Q
    ||||| ||||| |||||||||||| ||| ||||||||||||||||    
T  44686700 tatagtttttcgaggtcttcttctgcctctagtgatttaactact 44686744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 429
Target Start/End: Original strand, 45205156 - 45205208
Alignment:
Q  377 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||| |||| || || |||||||||| ||| ||||||||||||||||||||    
T  45205156 ctaatcctatcccgtctagtcttaccactcatccaacacaacatcctcatctc 45205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 56375264 - 56375208
Alignment:
Q  377 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||| ||||| | || |||||||||| ||| |||| |||||||||||||||||||    
T  56375264 ctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 56375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 336
Target Start/End: Original strand, 44078 - 44147
Alignment:
Q  267 aaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||||| |||||||||||||||||||||| || ||||| ||||||| ||||| |||||||||||    
T  44078 aaggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctac 44147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 31538 - 31471
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  31538 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 31471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 5338795 - 5338727
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||    
T  5338795 aggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtgctac 5338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 27848016 - 27848084
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  27848016 aggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctac 27848084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 48431619 - 48431685
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||| ||||| |||||    
T  48431619 gtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctac 48431685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 35828761 - 35828829
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||| | ||||||||||||| | || ||||||||||||| |||||||||||||||||    
T  35828761 aggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccataggtgctac 35828829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 34792561 - 34792628
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| ||||||| |||| ||| ||||| |||||||||||    
T  34792561 ggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctac 34792628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 332
Target Start/End: Complemental strand, 43423788 - 43423726
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||||| |||||| ||||||||||||||| || ||||||||||||| ||||| |||||||    
T  43423788 gtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtg 43423726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 14226047 - 14226108
Alignment:
Q  275 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||| |||||||||||||||||||||| || ||||||||||||| ||||  |||||||||||    
T  14226047 ctctctacatgcccaaaccacctaagcctattttccaccatcttttctatgataggtgctac 14226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 40416439 - 40416374
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| |||||||| ||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  40416439 tcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctac 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 1661501 - 1661433
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||||| ||||||| || ||| || ||||||||||||| ||||| |||||||||||    
T  1661501 aggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctac 1661433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 2544670 - 2544602
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||| ||||||||||||||  |  ||||||||||||| ||||| |||||||||||    
T  2544670 aggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctac 2544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 3819059 - 3819135
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| | ||||||| | |||||||||||||||| ||||  || || |||||||||| |||||||||||||||||    
T  3819059 gaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgctac 3819135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 4379983 - 4379927
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    ||||||||||||||||   || |||||||||||||| ||||||||||||||||||||    
T  4379983 atttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctc 4379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 433
Target Start/End: Original strand, 9599702 - 9599758
Alignment:
Q  377 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||||||| || || |||||||||| ||| ||||||||||||||||||||||||    
T  9599702 ctaatcatatcccgtctagtcttaccactcatccaacacaacatcctcatctctgct 9599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 52442808 - 52442868
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||||| | || |||||||||||||| ||||||||||||||||| ||||||    
T  52442808 atttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgct 52442868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 1210815 - 1210748
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1210815 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1210748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 8343062 - 8343125
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    |||||| ||||||||||| ||||||||||  |||||||||| || ||||||||||||| |||||    
T  8343062 aatccacaggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctac 8343125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 9509388 - 9509321
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||| |||||||| || |||  |||||||| ||||| |||||||||||    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctac 9509321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 38868948 - 38868885
Alignment:
Q  273 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||| ||||||||||||||||||||||  | ||||||||||||| ||||  |||||||||||    
T  38868948 ttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctatgataggtgctac 38868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 51602126 - 51602059
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  51602126 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 51602059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 13827928 - 13827994
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 334  Q
    ||||||||||| ||||||  |||||||||||| | || ||||||||||||| ||||| |||||||||    
T  13827928 aggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgct 13827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 8671986 - 8671921
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  8671986 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 8671921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 9509296 - 9509236
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||||||||  | || |||||| ||| ||| ||||||||||||||||||||||||    
T  9509296 atttctaatcatatcctgtctagtcttatcactcatccaacacaacatcctcatctctgct 9509236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 32404737 - 32404801
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||||||| |||||  ||||||||||||||| || ||||||||||||| | ||| |||||||    
T  32404737 aggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtg 32404801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 34827406 - 34827462
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||| ||| ||| || |||||||||| ||| ||||||||||||||||||||    
T  34827406 atttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatctc 34827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 15086004 - 15085937
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  15086004 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 15085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 22090166 - 22090099
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||  ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  22090166 ggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 22090099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 23791848 - 23791923
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||| | ||||||||| ||||||| ||||||||||||| ||| | || |||||||| |||||||| ||| ||||    
T  23791848 aatccacatgtcttctctctacatgcacaaaccacctaagtttagtatctaccatcttttctaccatgggtcctac 23791923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 26016418 - 26016355
Alignment:
Q  370 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||| |||| |||||  | || |||||||||||||| |||| |||||||||||||||||||    
T  26016418 attatttataattatatcctgtctagtcttaccacacatccaacgcaacatcctcatctctgct 26016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 39140590 - 39140523
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||||||||||  | |||   ||||||| ||||| |||||||||||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgctac 39140523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 51440977 - 51441040
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  51440977 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 51441040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 318
Target Start/End: Original strand, 10569278 - 10569328
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 318  Q
    ||||||||||| ||||||||||||||||||||||  | ||| |||||||||    
T  10569278 aggtcttctctctacatgcccaaaccacctaagccaagttttcaccatctt 10569328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 32231167 - 32231233
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||||||||||| |||||| || |||| ||||  || ||||| |||||||||||    
T  32231167 gtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctac 32231233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 4380081 - 4380016
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||   ||||||||||| |||| ||||||||||||| ||||| |||| ||||||    
T  4380081 tcttctctctacatgtataaaccacctaaccttagtttccaccatcttttctactatagttgctac 4380016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 36340014 - 36340083
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 337  Q
    ||||||||||| | |||| | ||||||||||| | || ||||||||||||| ||||  ||||||||||||    
T  36340014 aggtcttctctctccatgtctaaaccacctaaacctattttccaccatcttttctaatataggtgctaca 36340083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 1661404 - 1661344
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| |||| |  || |||||| || ||||||||||||||||| |||||||||||    
T  1661404 atttctaatcctatcacatctagtcttatcagacattcaacacaacatcttcatctctgct 1661344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 16822233 - 16822289
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||||| |||||| |||||||||||||||  | |||| |||||||| |||||    
T  16822233 aggtcttctctctacatgtccaaaccacctaagccgagtttctaccatcttgtctac 16822289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 17815537 - 17815493
Alignment:
Q  274 tctctatacatgcccaaaccacctaagcttactttccaccatctt 318  Q
    ||||| ||||||||||||||| |||||| || |||||||||||||    
T  17815537 tctctctacatgcccaaaccaactaagcctagtttccaccatctt 17815493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 19908250 - 19908318
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||| |||||| |||||||||||| ||||||| |||  ||||| ||||||| | ||| |||||||||||    
T  19908250 aggttttctctctacatgcccaaatcacctaaacttggtttcccccatcttttttactataggtgctac 19908318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 329
Target Start/End: Complemental strand, 51812591 - 51812535
Alignment:
Q  273 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 329  Q
    |||||| |||||||||||| ||| ||||| || ||||||||||||| ||||| ||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatag 51812535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 29700374 - 29700279
Alignment:
Q  241 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| |||||||  | |||||||| |||||| ||| || |||||||||||||||||||  ||||||| ||||||| ||||| |||||||||||    
T  29700374 atctactctccttactacagaatccaatggtcttttctctatatgcccaaaccacctaagccaactttcctccatcttttctactataggtgctac 29700279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 9695698 - 9695634
Alignment:
Q  272 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| ||||||||||||||||||||||  | ||||||||||||| ||||| |||||||||||    
T  9695698 cttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctac 9695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 35643814 - 35643868
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| |||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctac 35643868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 13171865 - 13171926
Alignment:
Q  273 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 334  Q
    |||||| || ||||||||||||||||||| || ||||||||||||| ||||| |||||||||    
T  13171865 ttctctttatatgcccaaaccacctaagcatattttccaccatcttttctactataggtgct 13171926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 45512709 - 45512774
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| || |||||||||||| ||||||||| |||||| |||||| ||||| |||||||||||    
T  45512709 tcttctctttatatgcccaaaccatctaagcttattttccatcatcttttctactataggtgctac 45512774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 12491350 - 12491417
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  12491350 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 12491417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 18474173 - 18474239
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||| ||||||| |||||| || ||||||||||| | ||||| |||||||||||    
T  18474173 gtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtgctac 18474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 41971991 - 41972045
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||||| |||||    
T  41971991 gtcttctctctacatgtccaaaccacctaaacttattttccaccatcttttctac 41972045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 301
Target Start/End: Complemental strand, 79114 - 79081
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagc 301  Q
    ||||||||||||||||||||||||||||||||||    
T  79114 aggtcttctctatacatgcccaaaccacctaagc 79081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 12611613 - 12611537
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 337  Q
    |||||| |||| |||| | ||||| | |||||||||||||| || ||||||||||||| |||||  |||||||||||    
T  12611613 aatccacaggtgttctgtctacatacgcaaaccacctaagcctagtttccaccatcttttctactttaggtgctaca 12611537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 16917251 - 16917199
Alignment:
Q  272 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||| |||||||||||||||||||||| || ||| ||||||||| |||||    
T  16917251 cttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttctac 16917199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 433
Target Start/End: Original strand, 30456535 - 30456575
Alignment:
Q  393 tggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  30456535 tggtcttaccacacatccaacgcaacatcctcatctctgct 30456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 324
Target Start/End: Complemental strand, 30748528 - 30748472
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||||| |||||||||||||||||||||| |   |||||||||||| |||||    
T  30748528 aggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctac 30748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 41444549 - 41444605
Alignment:
Q  280 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||| ||||||||||||| | || ||||||||||||| ||||| |||||||||||    
T  41444549 tacatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctac 41444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 45419308 - 45419240
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| ||| |||||||||||||||||||||  || |||  |||||||| ||||| |||||||||||    
T  45419308 aggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctac 45419240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 2776441 - 2776508
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||  |||||||||||||||||||||  | |||| |||||| | ||||| |||||||||||    
T  2776441 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 2776508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 428
Target Start/End: Original strand, 28300416 - 28300471
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatct 428  Q
    |||||||||| ||||||  || ||||||| |||||| |||||||||||||||||||    
T  28300416 atttctaatcttatctcatctagtcttactacacatccaacacaacatcctcatct 28300471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 36143346 - 36143287
Alignment:
Q  374 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||||| ||||||  || ||||||||||||   ||||||||||||||||||||||||    
T  36143346 tttctaatcctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgct 36143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 36545219 - 36545156
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  36545219 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 36545156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 336
Target Start/End: Original strand, 36565457 - 36565520
Alignment:
Q  273 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  36565457 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 36565520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 16917335 - 16917293
Alignment:
Q  159 tatagcttttcaaggtcttcttctacctttagtgatttaacta 201  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||    
T  16917335 tatagcttttctaggtcttcttctacctgtagtgatttgacta 16917293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 424
Target Start/End: Complemental strand, 36069620 - 36069570
Alignment:
Q  374 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctc 424  Q
    ||||||||| |||| || || |||||||||||||| |||||||||||||||    
T  36069620 tttctaatcttatcccgtctagtcttaccacacatccaacacaacatcctc 36069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 36545103 - 36545065
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  36545103 gtcttaccactcatccaacacaacatcctcatctctgct 36545065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 39760754 - 39760788
Alignment:
Q  399 taccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||||||||||||||||||||||||    
T  39760754 taccacacatccaacacaacatcctcatctctgct 39760788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 36395160 - 36395229
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacct-aagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||||||||||||| || |||| || |||| |||| ||| ||||| |||||||||||    
T  36395160 aggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctac 36395229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 40813392 - 40813327
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  40813392 tcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 40813327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 43904876 - 43904947
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagc---ttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||| |||||||||||||||   ||| ||||| ||||||| ||||| |||| ||||||    
T  43904876 aggtcttctctctacatgtccaaaccacctaagcttattattttcctccatcttttctactatagatgctac 43904947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 17491832 - 17491888
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||||| ||||| ||||||||||||||| ||| | |||||||| || |||||    
T  17491832 aggtcttctctctacatacccaaaccacctaagtttattgtccaccatattttctac 17491888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 36143436 - 36143368
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| ||| || ||||||||||||||||||  || ||||||||||||  ||| | |||||||||||    
T  36143436 aggtcttttctctaaatgcccaaaccacctaagtctattttccaccatctattctgctataggtgctac 36143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 39946928 - 39946860
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| | |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  39946928 aggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 39946860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 44681250 - 44681318
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| || ||  |||||||  ||||||||| ||||||||||||| ||||  |||||||||||    
T  44681250 aggtcttctctctagatttccaaaccttctaagcttattttccaccatcttttctattataggtgctac 44681318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 336
Target Start/End: Complemental strand, 33667294 - 33667219
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||| ||||||||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  33667294 aatccacaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 33667219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 31636132 - 31636199
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  31636132 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 31636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 28676668 - 28676598
Alignment:
Q  266 aaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||||| |||||||| ||||||||||||  || ||||||||||||| ||||| |||| ||||||    
T  28676668 aaaggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctac 28676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 226 - 324
Target Start/End: Complemental strand, 42199399 - 42199301
Alignment:
Q  226 actactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    |||||| ||||| | ||||||| |||||||  | ||||| | | ||||||||| |||||||||||||||||||||  || ||||||||||||| |||||    
T  42199399 actactctccatgtgatctactctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac 42199301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 43558040 - 43558106
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||| ||||  |||| ||||||    
T  43558040 gtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctac 43558106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 43475311 - 43475243
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |  || |||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  43475311 aggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtgctac 43475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 4496454 - 4496387
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  4496454 ggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctac 4496387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 21952329 - 21952274
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatct 428  Q
    |||||||||| ||||||| || |||||||||||||| |||| ||||||||||||||    
T  21952329 atttctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatct 21952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 41833793 - 41833863
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatc--ttctctaccataggtgctac 336  Q
    ||||||| ||| |||||||||||||||||||||| ||  ||||||||||  |||| |||||||||||||||    
T  41833793 aggtcttgtctctacatgcccaaaccacctaagcatatgttccaccatcttttctataccataggtgctac 41833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 1287792 - 1287858
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1287792 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1287858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 1275332 - 1275267
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1275332 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1275267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 15489706 - 15489771
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||||||||||||| ||||||| | |||| |||||||| ||||| |||||| ||||    
T  15489706 tcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaataggtactac 15489771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 18351118 - 18351187
Alignment:
Q  268 aggtcttctctataca-tgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||| |||||||||||||||||| || |||| ||||| || ||||| |||||||||||    
T  18351118 aggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctac 18351187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 2713023 - 2712947
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| ||||||||||| |||||||||||||||||||||  || | || |||||||| |  || |||||||||||    
T  2713023 gaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctac 2712947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 34273098 - 34273030
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||  |||||||||||    
T  34273098 aggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctac 34273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 14665784 - 14665717
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| | || ||||||||| |||||||||||    
T  14665784 ggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggtgctac 14665717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 16347590 - 16347657
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  16347590 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 16347657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 24178580 - 24178513
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||  |||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  24178580 ggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 24178513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 28977071 - 28977138
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||| ||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  28977071 ggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctac 28977138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 38685037 - 38684970
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  38685037 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 38684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 14667816 - 14667766
Alignment:
Q  286 cccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||||||||  || ||||||||||||| ||||| |||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttctactataggtgctac 14667766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 3775195 - 3775256
Alignment:
Q  157 cttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctac 218  Q
    ||||||| ||||| |||||||||||| ||| ||||||||| |||||| ||||| | ||||||    
T  3775195 cttatagtttttctaggtcttcttctgcctctagtgatttgactactatccatttaatctac 3775256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 6889071 - 6889014
Alignment:
Q  261 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 318  Q
    |||||| | ||||||||| |||||| ||||||||| ||||| || |||||||||||||    
T  6889071 aatccacaagtcttctctctacatgtccaaaccacttaagcctattttccaccatctt 6889014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 8492627 - 8492664
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattc 410  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  8492627 atttctaattatatctcgtctggtcttaccacacattc 8492664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 14749386 - 14749309
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 337  Q
    ||||||| ||||||||||| |||||| |||||||| |||||  || |||| ||||  || ||||| ||||||||||||    
T  14749386 gaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctaca 14749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 27944 - 27896
Alignment:
Q  288 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||||||| || |||||| |||||| ||||| |||||||||||    
T  27944 caaaccacctaagcctattttccatcatcttttctactataggtgctac 27896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 79584 - 79516
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||| |||||||||||||   |  ||||||||||||| ||||| |||||| ||||    
T  79584 aggtcttctctctacatgtccaaaccacctaattatgttttccaccatcttttctactataggtactac 79516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 6859460 - 6859384
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||| | ||||||||| ||| || |||||||||||| || |  |||||||||||||||  || |||||||||||    
T  6859460 gaatccacaagtcttctctctacgtgtccaaaccacctatgcctgttttccaccatcttcttcactataggtgctac 6859384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 12492596 - 12492656
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 329  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||    
T  12492596 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatag 12492656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 21193858 - 21193910
Alignment:
Q  275 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccat 327  Q
    |||| |||||||||||| ||||||||  || |||||||||| |||||||||||    
T  21193858 ctctctacatgcccaaatcacctaagtctagtttccaccatattctctaccat 21193910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 431
Target Start/End: Complemental strand, 27998379 - 27998343
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctg 431  Q
    |||||||||||||| |||| |||||||||||||||||    
T  27998379 gtcttaccacacatccaacgcaacatcctcatctctg 27998343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 38578734 - 38578782
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 318  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| ||||||||    
T  38578734 gtcttctctttacatgctcaaaccacctaagtttagtttctaccatctt 38578782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 8180857 - 8180783
Alignment:
Q  262 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||| |||| |||| ||| ||||| |||||||||||    
T  8180857 atccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgctac 8180783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 13240958 - 13241016
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccata 328  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| |||| ||||    
T  13240958 gtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttctaacata 13241016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 12141615 - 12141547
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| | ||| |||||||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  12141615 aggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctac 12141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 19024239 - 19024183
Alignment:
Q  280 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||| |||||||||||||||||||||||||||||||| || |  |||||||||||    
T  19024239 tacatgtccaaaccacctaagcttactttccaccatcttttcaaatataggtgctac 19024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 43238305 - 43238372
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43238372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 336
Target Start/End: Complemental strand, 25834758 - 25834684
Alignment:
Q  262 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||| ||||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  25834758 atccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 25834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 18958959 - 18958910
Alignment:
Q  287 ccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctac 18958910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 309
Target Start/End: Complemental strand, 42543314 - 42543265
Alignment:
Q  260 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttc 309  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  42543314 gaatccacaggtcttctctgtacatgcccaaaccacctaagtttagtttc 42543265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 7825336 - 7825276
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||||||||  | || |||||||||||||| |||| ||||||||| |||||||||    
T  7825336 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgct 7825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 425
Target Start/End: Original strand, 9556672 - 9556724
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctca 425  Q
    ||||||||||||||| || ||  ||||||||||||| ||||||||||||||||    
T  9556672 atttctaatcatatcccgtctaatcttaccacacatccaacacaacatcctca 9556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 9647909 - 9647969
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| |||| |  || |||||||||||||| |||| |||||||||||||||||||    
T  9647909 atttctaatcttatcacatctagtcttaccacacatccaacgcaacatcctcatctctgct 9647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 43752158 - 43752226
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||| ||||| ||||||||| || |||| |||| ||| ||||| |||||||||||    
T  43752158 aggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctac 43752226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 11992320 - 11992387
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| || ||| |||||||| ||||||||| |||| |||| ||| ||||| |||||||||||    
T  11992320 ggtcttctctctatatgtccaaaccatctaagcttattttctaccaacttttctactataggtgctac 11992387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 36183521 - 36183454
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||| |||||| ||||| ||| |||| |||| ||| ||||| |||||||||||    
T  36183521 ggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctac 36183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 38435021 - 38434954
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagct-tactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||||||||||||| ||  | || ||||||||||||| ||||| |||||||||||    
T  38435021 gtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctac 38434954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 38452897 - 38452964
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||| ||||||    
T  38452897 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctac 38452964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 45367837 - 45367904
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| ||||| ||| |||| |||| ||| ||||| |||||||||||    
T  45367837 ggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactataggtgctac 45367904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 2610657 - 2610591
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||| ||||||||||||||| |||||| || |||| |||| ||| || || |||||||||||    
T  2610657 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctac 2610591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 3481212 - 3481162
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 318  Q
    ||||||||||| |||||| ||||||||||||||| |  |||||||||||||    
T  3481212 aggtcttctctctacatgtccaaaccacctaagcctgttttccaccatctt 3481162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 8180736 - 8180698
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  8180736 gtcttaccactcatccaacacaacatcctcatctctgct 8180698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 331
Target Start/End: Original strand, 14197375 - 14197437
Alignment:
Q  270 gtcttctctatacatgcccaaaccacct-aagcttactttccaccatcttctctaccataggt 331  Q
    |||||| || |||||||||||||||||| |||| || ||||||||||||| ||||| ||||||    
T  14197375 gtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 315
Target Start/End: Original strand, 9556582 - 9556627
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccat 315  Q
    ||||||||| |||||||| ||||||||||||| || ||||||||||    
T  9556582 gtcttctctctacatgcctaaaccacctaagcctattttccaccat 9556627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 11412777 - 11412724
Alignment:
Q  283 atgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||||| || |||||||||| || ||||| |||||||||||    
T  11412777 atgcccaaacaacctaagcctattttccaccatattttctactataggtgctac 11412724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 12026216 - 12026264
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatc 316  Q
    ||||||||||| ||||||  |||||||||||||| || |||||||||||    
T  12026216 aggtcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 12734679 - 12734623
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||| |||| || || |||||||||| ||| || |||||||||||||||||    
T  12734679 atttctaatcctatcccgtctagtcttaccactcatccagcacaacatcctcatctc 12734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 424
Target Start/End: Original strand, 37393470 - 37393522
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccaca-cattcaacacaacatcctc 424  Q
    |||||| ||||||||||  || ||||||||||| |||||||||||||||||||    
T  37393470 atttctgatcatatctcatctagtcttaccacaacattcaacacaacatcctc 37393522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 41763253 - 41763317
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 332  Q
    ||||||||||| | |||| ||||||||||||||| || |||| |||| ||| ||||| |||||||    
T  41763253 aggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtg 41763317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 41779610 - 41779670
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| |||| ||||| |||||| |||||||| ||  |||||| ||||||||||||    
T  41779610 atttctaatcctatcccgcctagtcttaacacacatttaatgcaacattctcatctctgct 41779670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 42092497 - 42092437
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||||||||||| || || ||||||| |||||| |||  ||||||| |||||||||||    
T  42092497 atttctaatcatatcccgtctagtcttactacacatccaatgcaacatcatcatctctgct 42092437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 45077726 - 45077670
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 429  Q
    |||||||||  ||||| | || |||||||||||||| |||| |||||||||||||||    
T  45077726 atttctaattctatctagtctagtcttaccacacatccaacgcaacatcctcatctc 45077670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 33084129 - 33084061
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| ||||| |||||||||||||||  || |||| |||||||| |||||||||||||||||    
T  33084129 aggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctac 33084061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 14389379 - 14389446
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    ||||||||||| |||||| |||||||||||||| ||  ||||||||||||| ||||| |||||||||||    
T  14389379 aggtcttctctctacatgtccaaaccacctaag-tttgtttccaccatcttttctacgataggtgctac 14389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 9593919 - 9593973
Alignment:
Q  270 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||| |||||||||||||||||||||| || |||| |||||||| |||||    
T  9593919 gtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctac 9593973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 21870201 - 21870255
Alignment:
Q  165 ttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 219  Q
    ||||| |||||||| ||| ||||||||||||| |||||||||||| |||||||||    
T  21870201 ttttctaggtcttcctctgcctttagtgatttgactactctccatcttatctact 21870255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 31818685 - 31818623
Alignment:
Q  157 cttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 219  Q
    ||||||| ||||| ||||||||| |||||||||||||| | ||||| |||||||| |||||||    
T  31818685 cttatagtttttctaggtcttctcctacctttagtgatctcactaccctccatatgatctact 31818623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 33997765 - 33997801
Alignment:
Q  280 tacatgcccaaaccacctaagcttactttccaccatc 316  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33997765 tacatgcccaaaccacctaagcttagtttccaccatc 33997801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 5258360 - 5258427
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  5258360 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 5258427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 6293678 - 6293733
Alignment:
Q  378 taatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    ||||||||||| | ||  | ||||||||||| ||||||||||||||||||||||||    
T  6293678 taatcatatctagtctaattttaccacacatccaacacaacatcctcatctctgct 6293733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 24665881 - 24665818
Alignment:
Q  268 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggt 331  Q
    ||||||||||| |||||| ||||||||||||||| || |||| ||||| || ||||| ||||||    
T  24665881 aggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 28085446 - 28085379
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  28085446 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctac 28085379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 430
Target Start/End: Original strand, 5129164 - 5129198
Alignment:
Q  396 tcttaccacacattcaacacaacatcctcatctct 430  Q
    |||||||||||||||||| ||||||||||||||||    
T  5129164 tcttaccacacattcaacgcaacatcctcatctct 5129198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 32755875 - 32755837
Alignment:
Q  395 gtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  32755875 gtcttaccactcatccaacacaacatcctcatctctgct 32755837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 2079408 - 2079343
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||| ||||| || ||||||| ||||| || ||||||||||||| ||||| |||| ||||||    
T  2079408 tcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgctac 2079343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 4948529 - 4948578
Alignment:
Q  275 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||| |||||||||||||||||  | ||||||||||||| |||||    
T  4948529 ctctatacaggcccaaaccacctaagccgaatttccaccatcttttctac 4948578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 4955500 - 4955549
Alignment:
Q  275 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 324  Q
    ||||||||| |||||||||||||||||  | ||||||||||||| |||||    
T  4955500 ctctatacaggcccaaaccacctaagccgaatttccaccatcttttctac 4955549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 8364631 - 8364575
Alignment:
Q  280 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||||||||||||||| || |||| |||| ||| ||||| |||| ||||||    
T  8364631 tacatgcccaaaccacctaagcctattttcaaccaccttttctactatagttgctac 8364575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 429
Target Start/End: Complemental strand, 26291732 - 26291700
Alignment:
Q  397 cttaccacacattcaacacaacatcctcatctc 429  Q
    ||||||||||||||||||||||||| |||||||    
T  26291732 cttaccacacattcaacacaacatcatcatctc 26291700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 433
Target Start/End: Original strand, 33998308 - 33998368
Alignment:
Q  373 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 433  Q
    |||||||||| |||| |  || |||||||||||||| |||| ||||||| |||||||||||    
T  33998308 atttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgct 33998368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 335
Target Start/End: Complemental strand, 11866 - 11802
Alignment:
Q  271 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 335  Q
    |||||||| ||||||||||||||||||||||  | || | |||||||| ||||| ||||||||||    
T  11866 tcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgcta 11802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 1160 - 1227
Alignment:
Q  269 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 336  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1160 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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