View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2797_low_36 (Length: 248)
Name: NF2797_low_36
Description: NF2797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2797_low_36 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 37414316 - 37414080
Alignment:
| Q |
1 |
ttcataagccatttaaccttgcagcataatctaagaaaccaataccaactatcatgatattcatattgcaatctttccgcacaatcaaaatacacataca |
100 |
Q |
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| T |
37414316 |
ttcataagccatttaaccttgcagcataatctaagaaaccaataccaactatcatcatattcatattgcaatctttccgcacaatcaaaatacacataca |
37414217 |
T |
|
| Q |
101 |
ttcttagattaaattccaacacacactaatatgggttcaaacaccattgagaaatcgaatatttaaataattcagacctcattgatatccaaatgttcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37414216 |
ttcttagattaaattccaacacacactaatatgggttcaaacaccattgagaaatcgaatatttaaataattcagacctcattgatatccaaatgttcac |
37414117 |
T |
|
| Q |
201 |
tttctatttggcaagttttgctttaaagaatgttcat |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
37414116 |
tttctatttggcaagttttgctttaaagaatgttcat |
37414080 |
T |
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