View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2799_high_7 (Length: 247)
Name: NF2799_high_7
Description: NF2799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2799_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 39991948 - 39992171
Alignment:
| Q |
1 |
aagcttcaaccaattttgcacaagtagttccgacttctgatgtatatgtatttgaagaaccttaaccctattcatatgctaccaaagcatacaattcatg |
100 |
Q |
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| T |
39991948 |
aagcttcaaccaattttgcacaagtagttccgacttctgatgtatatgtatttgaagaaccttaaccctattcatatgctaccaaagcatacaattcatg |
39992047 |
T |
|
| Q |
101 |
tccaccaaaccccaaaaaatatcaagttttgccctttagtaaatattatctaggacaatagtttacaagatcacaacaccagttcaaaggaatttcattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39992048 |
tccaccaaaccccaaaaaatatcaagttttgccctttagtaaatattatctaggacaatagtttacaagatcacaacaccagttcaaaggaatttcattt |
39992147 |
T |
|
| Q |
201 |
cataaggtacaaatccatagttct |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
39992148 |
cataaggtacaaatccatagttct |
39992171 |
T |
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