View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2800R-Insertion-2 (Length: 1023)

Name: NF2800R-Insertion-2
Description: NF2800R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2800R-Insertion-2
NF2800R-Insertion-2
[»] chr4 (60 HSPs)
chr4 (236-664)||(46717093-46717530)
chr4 (8-172)||(23067810-23067974)
chr4 (8-171)||(9661842-9662005)
chr4 (8-148)||(46716856-46716996)
chr4 (8-171)||(14542474-14542637)
chr4 (8-171)||(4634272-4634435)
chr4 (8-175)||(42972023-42972190)
chr4 (41-175)||(52555716-52555850)
chr4 (734-896)||(46719763-46719943)
chr4 (8-167)||(16991865-16992024)
chr4 (8-171)||(41486564-41486727)
chr4 (8-171)||(46728882-46729044)
chr4 (8-130)||(9474501-9474623)
chr4 (34-168)||(54420701-54420834)
chr4 (8-163)||(34115613-34115769)
chr4 (10-130)||(31601322-31601443)
chr4 (21-168)||(28588553-28588701)
chr4 (11-170)||(7242734-7242893)
chr4 (11-130)||(12519686-12519805)
chr4 (8-153)||(32188989-32189132)
chr4 (8-171)||(43156765-43156928)
chr4 (11-165)||(51646088-51646243)
chr4 (8-166)||(44375226-44375384)
chr4 (8-170)||(30416583-30416746)
chr4 (8-146)||(38434612-38434751)
chr4 (34-153)||(53903617-53903735)
chr4 (8-142)||(15729943-15730078)
chr4 (8-166)||(37869379-37869536)
chr4 (17-167)||(1657537-1657691)
chr4 (10-167)||(6408433-6408593)
chr4 (9-121)||(40859685-40859797)
chr4 (19-125)||(2945172-2945278)
chr4 (12-130)||(28990328-28990446)
chr4 (8-131)||(20961480-20961600)
chr4 (14-171)||(4622677-4622836)
chr4 (28-144)||(9549483-9549599)
chr4 (80-171)||(3673612-3673703)
chr4 (85-165)||(1645980-1646060)
chr4 (21-128)||(9526314-9526421)
chr4 (85-167)||(3169033-3169115)
chr4 (12-154)||(46775823-46775964)
chr4 (12-165)||(35338389-35338542)
chr4 (9-90)||(50003139-50003220)
chr4 (80-171)||(5388504-5388595)
chr4 (8-168)||(4959535-4959697)
chr4 (14-165)||(26625131-26625281)
chr4 (12-125)||(6789842-6789949)
chr4 (85-171)||(11817061-11817147)
chr4 (10-142)||(29589325-29589457)
chr4 (662-707)||(46719764-46719809)
chr4 (13-140)||(23926061-23926188)
chr4 (17-113)||(44021542-44021638)
chr4 (87-166)||(46386814-46386893)
chr4 (54-120)||(38170167-38170233)
chr4 (67-154)||(26576525-26576611)
chr4 (62-121)||(29474370-29474429)
chr4 (8-167)||(1124929-1125093)
chr4 (80-171)||(33020959-33021051)
chr4 (922-1016)||(46720326-46720428)
chr4 (8-102)||(30470085-30470175)
[»] chr2 (50 HSPs)
chr2 (8-172)||(7640318-7640482)
chr2 (8-171)||(3390421-3390584)
chr2 (8-171)||(25771434-25771597)
chr2 (8-168)||(27024101-27024261)
chr2 (8-171)||(27191299-27191460)
chr2 (8-171)||(27841113-27841274)
chr2 (10-171)||(25516483-25516642)
chr2 (8-167)||(5930416-5930575)
chr2 (8-171)||(43566866-43567025)
chr2 (8-171)||(44167673-44167834)
chr2 (8-168)||(3602977-3603137)
chr2 (8-171)||(6089882-6090042)
chr2 (8-167)||(36507924-36508081)
chr2 (8-171)||(40125378-40125541)
chr2 (24-171)||(42105730-42105877)
chr2 (8-131)||(43929318-43929441)
chr2 (12-168)||(9715510-9715667)
chr2 (11-171)||(37883642-37883802)
chr2 (12-171)||(25623011-25623170)
chr2 (34-171)||(3464948-3465083)
chr2 (10-171)||(25237290-25237451)
chr2 (8-171)||(16879927-16880084)
chr2 (8-171)||(19580964-19581128)
chr2 (8-171)||(41176851-41177010)
chr2 (13-171)||(41841938-41842095)
chr2 (12-167)||(29812581-29812736)
chr2 (8-170)||(10589028-10589191)
chr2 (8-171)||(26491292-26491454)
chr2 (12-142)||(19953588-19953718)
chr2 (8-151)||(7443528-7443672)
chr2 (8-113)||(16992060-16992165)
chr2 (8-120)||(38822115-38822224)
chr2 (8-150)||(29734199-29734342)
chr2 (8-171)||(13268563-13268724)
chr2 (79-168)||(44441378-44441467)
chr2 (8-171)||(2251307-2251470)
chr2 (18-149)||(11930925-11931056)
chr2 (8-171)||(35353641-35353795)
chr2 (54-171)||(15673969-15674099)
chr2 (10-171)||(5071334-5071495)
chr2 (68-165)||(34479951-34480048)
chr2 (10-169)||(3397943-3398102)
chr2 (8-47)||(43929262-43929301)
chr2 (85-143)||(11550590-11550648)
chr2 (87-140)||(24500538-24500592)
chr2 (8-57)||(44951522-44951571)
chr2 (8-44)||(10589211-10589247)
chr2 (86-124)||(22652002-22652040)
chr2 (60-154)||(38105244-38105338)
chr2 (8-104)||(4878698-4878794)
[»] chr7 (48 HSPs)
chr7 (8-175)||(30992785-30992952)
chr7 (8-171)||(47749723-47749886)
chr7 (8-171)||(40775256-40775419)
chr7 (8-175)||(43807112-43807279)
chr7 (8-153)||(26017620-26017765)
chr7 (8-168)||(25855182-25855342)
chr7 (8-171)||(24475332-24475493)
chr7 (8-171)||(24470384-24470545)
chr7 (8-168)||(49166919-49167077)
chr7 (8-171)||(8611586-8611747)
chr7 (12-171)||(23732359-23732518)
chr7 (8-171)||(28015345-28015509)
chr7 (8-169)||(7985883-7986044)
chr7 (12-167)||(13008639-13008793)
chr7 (8-171)||(43483583-43483752)
chr7 (8-141)||(9933866-9933999)
chr7 (10-149)||(42490713-42490853)
chr7 (8-168)||(44681454-44681612)
chr7 (8-130)||(135107-135229)
chr7 (8-168)||(47156388-47156543)
chr7 (13-171)||(8319303-8319462)
chr7 (9-171)||(16263376-16263538)
chr7 (8-170)||(38649319-38649482)
chr7 (8-171)||(5025018-5025182)
chr7 (8-171)||(29804637-29804801)
chr7 (14-168)||(10250451-10250603)
chr7 (34-148)||(39090127-39090242)
chr7 (11-171)||(33530433-33530591)
chr7 (8-128)||(40476741-40476859)
chr7 (34-149)||(35661535-35661650)
chr7 (34-151)||(37399635-37399752)
chr7 (35-168)||(35141740-35141875)
chr7 (14-171)||(35135152-35135308)
chr7 (12-165)||(46918397-46918548)
chr7 (50-130)||(19895655-19895735)
chr7 (12-154)||(22751445-22751586)
chr7 (8-168)||(14734011-14734172)
chr7 (8-131)||(11001875-11001995)
chr7 (12-151)||(23177549-23177686)
chr7 (8-162)||(21552417-21552571)
chr7 (54-141)||(15123988-15124076)
chr7 (51-171)||(21329301-21329420)
chr7 (11-106)||(772497-772592)
chr7 (34-166)||(41748487-41748621)
chr7 (12-124)||(14707618-14707731)
chr7 (10-162)||(43098577-43098727)
chr7 (13-109)||(32312618-32312714)
chr7 (100-167)||(24045287-24045353)
[»] chr1 (50 HSPs)
chr1 (10-175)||(44562713-44562878)
chr1 (8-152)||(23320448-23320592)
chr1 (8-171)||(5832222-5832386)
chr1 (8-170)||(630746-630909)
chr1 (8-171)||(22344874-22345037)
chr1 (8-172)||(21326461-21326625)
chr1 (11-149)||(15276415-15276553)
chr1 (8-171)||(38646573-38646736)
chr1 (8-166)||(32539152-32539311)
chr1 (8-143)||(4564535-4564668)
chr1 (34-161)||(45659041-45659168)
chr1 (8-140)||(23257108-23257240)
chr1 (8-152)||(52752036-52752175)
chr1 (10-140)||(1767986-1768115)
chr1 (34-171)||(14717230-14717367)
chr1 (50-171)||(6212890-6213011)
chr1 (8-140)||(40488359-40488491)
chr1 (14-167)||(10877338-10877492)
chr1 (8-130)||(15698230-15698351)
chr1 (28-150)||(35077872-35077994)
chr1 (28-171)||(44513971-44514115)
chr1 (14-153)||(8893300-8893439)
chr1 (8-171)||(33703472-33703634)
chr1 (34-143)||(40992351-40992462)
chr1 (8-171)||(52839510-52839682)
chr1 (13-167)||(12148015-12148169)
chr1 (10-121)||(36621391-36621502)
chr1 (8-154)||(49651841-49651996)
chr1 (8-131)||(27469670-27469793)
chr1 (8-172)||(33177559-33177722)
chr1 (17-171)||(22032062-22032215)
chr1 (85-171)||(17579757-17579843)
chr1 (10-120)||(38644761-38644871)
chr1 (13-130)||(29067080-29067196)
chr1 (50-148)||(900134-900232)
chr1 (14-169)||(13691726-13691881)
chr1 (80-170)||(48655100-48655190)
chr1 (10-148)||(28213063-28213198)
chr1 (12-152)||(34659596-34659735)
chr1 (79-171)||(46589165-46589255)
chr1 (62-154)||(37685111-37685204)
chr1 (62-154)||(37700314-37700407)
chr1 (117-171)||(52839412-52839466)
chr1 (8-171)||(2350611-2350774)
chr1 (12-171)||(30853755-30853908)
chr1 (10-71)||(12967696-12967757)
chr1 (8-112)||(34566736-34566840)
chr1 (13-71)||(35356519-35356577)
chr1 (12-108)||(13969609-13969705)
chr1 (8-67)||(26199673-26199732)
[»] chr6 (28 HSPs)
chr6 (8-175)||(19759773-19759940)
chr6 (8-171)||(13234070-13234232)
chr6 (9-154)||(20845014-20845159)
chr6 (10-171)||(32457635-32457796)
chr6 (8-131)||(23843386-23843509)
chr6 (8-171)||(16913317-16913479)
chr6 (8-171)||(12576443-12576603)
chr6 (18-171)||(548838-548990)
chr6 (12-154)||(15128119-15128257)
chr6 (15-168)||(32804286-32804440)
chr6 (10-171)||(4663784-4663945)
chr6 (8-130)||(8633154-8633273)
chr6 (21-167)||(33194598-33194744)
chr6 (12-168)||(8644237-8644393)
chr6 (8-168)||(10744571-10744735)
chr6 (8-165)||(31747955-31748109)
chr6 (8-171)||(7049236-7049397)
chr6 (8-131)||(11425973-11426093)
chr6 (12-142)||(1944114-1944244)
chr6 (54-167)||(891581-891694)
chr6 (54-148)||(20745052-20745146)
chr6 (12-71)||(5417164-5417223)
chr6 (8-130)||(5544737-5544859)
chr6 (79-168)||(12652233-12652324)
chr6 (11-153)||(22530287-22530429)
chr6 (50-107)||(31804301-31804358)
chr6 (11-140)||(33541494-33541623)
chr6 (54-121)||(903496-903563)
[»] chr8 (54 HSPs)
chr8 (8-172)||(8054769-8054934)
chr8 (8-171)||(9270010-9270173)
chr8 (8-171)||(44295305-44295468)
chr8 (10-167)||(31874077-31874234)
chr8 (8-171)||(36545743-36545906)
chr8 (8-131)||(41996574-41996697)
chr8 (12-166)||(5989624-5989778)
chr8 (14-169)||(9992656-9992813)
chr8 (10-171)||(16937303-16937464)
chr8 (8-171)||(32256683-32256847)
chr8 (8-147)||(16996851-16996987)
chr8 (8-171)||(37658955-37659118)
chr8 (8-171)||(3680910-3681075)
chr8 (8-131)||(32104800-32104923)
chr8 (11-154)||(32412797-32412939)
chr8 (13-171)||(15665528-15665686)
chr8 (26-171)||(13864348-13864493)
chr8 (13-167)||(7269431-7269585)
chr8 (8-171)||(10042750-10042924)
chr8 (8-149)||(5917704-5917843)
chr8 (12-165)||(15237604-15237756)
chr8 (13-151)||(7281094-7281232)
chr8 (10-143)||(2628931-2629062)
chr8 (15-171)||(13977390-13977547)
chr8 (8-168)||(11655872-11656032)
chr8 (12-171)||(26937514-26937673)
chr8 (50-165)||(31147805-31147919)
chr8 (10-131)||(37129639-37129756)
chr8 (8-161)||(1215301-1215454)
chr8 (8-81)||(5457150-5457223)
chr8 (12-149)||(16808889-16809024)
chr8 (10-171)||(32920641-32920802)
chr8 (8-171)||(14327468-14327631)
chr8 (13-171)||(16938238-16938397)
chr8 (8-166)||(23766736-23766891)
chr8 (28-137)||(5327989-5328099)
chr8 (10-171)||(32061783-32061944)
chr8 (10-167)||(6833471-6833630)
chr8 (65-167)||(284494-284596)
chr8 (65-167)||(631281-631383)
chr8 (65-167)||(817093-817195)
chr8 (8-168)||(18190806-18190966)
chr8 (28-168)||(37719843-37719983)
chr8 (12-168)||(12244182-12244340)
chr8 (13-73)||(17019205-17019265)
chr8 (13-73)||(17549642-17549702)
chr8 (80-171)||(14530942-14531033)
chr8 (10-115)||(3925654-3925758)
chr8 (8-65)||(12248676-12248733)
chr8 (97-154)||(17019110-17019167)
chr8 (97-154)||(17549547-17549604)
chr8 (80-171)||(27534433-27534524)
chr8 (11-73)||(14115793-14115855)
chr8 (8-104)||(31713038-31713134)
[»] chr3 (48 HSPs)
chr3 (8-171)||(1165358-1165521)
chr3 (8-171)||(43029672-43029835)
chr3 (14-171)||(20201026-20201183)
chr3 (14-171)||(20203208-20203365)
chr3 (8-152)||(14741288-14741431)
chr3 (8-171)||(21803519-21803682)
chr3 (8-171)||(41882372-41882533)
chr3 (8-171)||(22286713-22286874)
chr3 (8-168)||(35501721-35501881)
chr3 (8-147)||(3088626-3088763)
chr3 (8-143)||(29182570-29182705)
chr3 (50-168)||(50519782-50519899)
chr3 (21-168)||(43839493-43839638)
chr3 (12-167)||(40461961-40462116)
chr3 (8-168)||(25374032-25374192)
chr3 (8-171)||(22844040-22844204)
chr3 (8-131)||(28995271-28995391)
chr3 (8-171)||(42106100-42106264)
chr3 (8-171)||(20251640-20251809)
chr3 (8-141)||(47914556-47914687)
chr3 (38-165)||(33076307-33076434)
chr3 (8-167)||(33977887-33978041)
chr3 (8-170)||(40797023-40797185)
chr3 (8-171)||(45664218-45664373)
chr3 (8-154)||(913278-913426)
chr3 (14-165)||(53426799-53426944)
chr3 (86-171)||(1220255-1220340)
chr3 (15-170)||(22893684-22893838)
chr3 (11-96)||(54240150-54240235)
chr3 (12-171)||(4019591-4019743)
chr3 (15-142)||(29776659-29776784)
chr3 (18-151)||(36540645-36540776)
chr3 (17-109)||(21585950-21586042)
chr3 (54-150)||(26412342-26412438)
chr3 (85-148)||(34766992-34767054)
chr3 (54-152)||(2598091-2598189)
chr3 (12-168)||(25939445-25939598)
chr3 (12-122)||(32237962-32238071)
chr3 (12-142)||(39340217-39340347)
chr3 (14-107)||(32089898-32089991)
chr3 (34-171)||(37051613-37051750)
chr3 (85-168)||(43242803-43242886)
chr3 (14-171)||(50460183-50460337)
chr3 (25-171)||(27831101-27831247)
chr3 (14-171)||(21085910-21086065)
chr3 (15-96)||(40365290-40365371)
chr3 (11-47)||(7656480-7656516)
chr3 (103-163)||(7656534-7656592)
[»] chr5 (43 HSPs)
chr5 (8-175)||(4726890-4727057)
chr5 (8-171)||(6887140-6887303)
chr5 (8-171)||(31645818-31645981)
chr5 (8-171)||(28618593-28618754)
chr5 (8-171)||(29310316-29310474)
chr5 (8-171)||(33486531-33486695)
chr5 (8-170)||(4070545-4070703)
chr5 (10-167)||(2415393-2415550)
chr5 (10-145)||(5378317-5378452)
chr5 (8-171)||(37424982-37425148)
chr5 (8-171)||(41554475-41554639)
chr5 (8-171)||(19646003-19646166)
chr5 (8-159)||(41063358-41063509)
chr5 (12-167)||(41358031-41358187)
chr5 (14-170)||(8812119-8812276)
chr5 (34-171)||(34893904-34894041)
chr5 (12-130)||(32390613-32390731)
chr5 (8-101)||(10924095-10924188)
chr5 (14-143)||(15710559-15710688)
chr5 (8-164)||(18472688-18472843)
chr5 (10-171)||(9034906-9035073)
chr5 (10-165)||(22397512-22397667)
chr5 (15-141)||(34866446-34866572)
chr5 (12-171)||(6647879-6648038)
chr5 (54-141)||(28500736-28500823)
chr5 (86-171)||(41988173-41988258)
chr5 (8-171)||(40565117-40565280)
chr5 (50-143)||(34843933-34844026)
chr5 (17-150)||(28423774-28423903)
chr5 (10-159)||(13079141-13079295)
chr5 (14-172)||(34873848-34874007)
chr5 (10-168)||(6074700-6074857)
chr5 (8-159)||(13007688-13007844)
chr5 (14-153)||(13080154-13080299)
chr5 (8-72)||(20270802-20270866)
chr5 (79-151)||(29154264-29154335)
chr5 (34-113)||(35906344-35906423)
chr5 (79-121)||(14910697-14910739)
chr5 (13-106)||(40774812-40774907)
chr5 (15-69)||(24288895-24288949)
chr5 (15-69)||(24373273-24373327)
chr5 (134-167)||(24288990-24289023)
chr5 (134-167)||(24373199-24373232)
[»] scaffold0722 (1 HSPs)
scaffold0722 (8-174)||(5488-5654)
[»] scaffold0316 (1 HSPs)
scaffold0316 (8-161)||(12165-12318)
[»] scaffold0024 (1 HSPs)
scaffold0024 (8-148)||(36541-36681)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-171)||(244623-244788)
[»] scaffold0157 (1 HSPs)
scaffold0157 (11-130)||(1106-1225)
[»] scaffold0045 (1 HSPs)
scaffold0045 (8-171)||(9620-9773)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-168)||(11011-11166)
[»] scaffold0340 (1 HSPs)
scaffold0340 (8-165)||(11740-11896)
[»] scaffold0018 (1 HSPs)
scaffold0018 (8-121)||(137020-137133)
[»] scaffold1294 (1 HSPs)
scaffold1294 (51-166)||(774-889)
[»] scaffold0150 (2 HSPs)
scaffold0150 (97-154)||(10376-10433)
scaffold0150 (13-73)||(10278-10338)
[»] scaffold0665 (1 HSPs)
scaffold0665 (11-73)||(1092-1154)


Alignment Details
Target: chr4 (Bit Score: 292; Significance: 1e-163; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 236 - 664
Target Start/End: Original strand, 46717093 - 46717530
Alignment:
Q  236 ctttaatgtcttgaattatttgataatttttgaataaagaataattgtttagcagaattgagttcgattttttatgtaacaatgtaggtcatgatttatt 335  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46717093 ctttaatgtcttgaactatttgataatttttgaataaagaataattgtttagcagaattgagttcgattttttatgtaagaatgtaggtcatgatttatt 46717192  T
Q  336 tccttctaaccaaactccaaagagttaacnnnnnnnn------tcaaaggctttatttgttacgacacaaaaaagaaaattaatccttcaaaaaggacac 429  Q
    |||||||||||||||||||||| |||||               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46717193 tccttctaaccaaactccaaagggttaaaaaaaaaaaaaaaaatcaaaggctttatttgttacgacacaaaaaagaaaattaatccttcaaaaaggacac 46717292  T
Q  430 ttctaaagcatttgcaagcatattatttagaaaagacaagaaagaggttcatgaacaacaactaaagactttatattgtttgctccttgtttcggtaaac 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  46717293 ttctaaagcatttgcaagcatattatttagaaaagacaagaaagaggttcatgaacaacgactaaagactttatattgtttgctccttgtttcgctaaac 46717392  T
Q  530 aataatggtacatacaacgaagtatattatccttctttc---nnnnnnnnnnnnnnncgaagtattttatcccgaactttagcatgaagcacattgattt 626  Q
    |||||||||||||||||||||||||||||||||||||||                  |||||||| ||||||| ||||||||||||||||||||||||||    
T  46717393 aataatggtacatacaacgaagtatattatccttctttcaagaaagaaaaaaaaaaacgaagtatattatcccaaactttagcatgaagcacattgattt 46717492  T
Q  627 ctttcacgaggaatatgatgcaagataattaatgaaat 664  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  46717493 ctttcatgaggaatatgatgcaagataattaatcaaat 46717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 23067810 - 23067974
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23067810 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaa 23067909  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctcc 172  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||    
T  23067910 gggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctcc 23067974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 9662005 - 9661842
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  9662005 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 9661906  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  9661905 gggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 9661842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 46716856 - 46716996
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46716856 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagatgacgaaatcacaaaataaaaaacgtaatagatgcgaaaatcacttatttcaataaaa 46716955  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaa 148  Q
    || |||||||||||||||||||||||||||||| |||||||    
T  46716956 ggaaaatagaaaaacgagttagagaggtgatttagggtcaa 46716996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 14542474 - 14542637
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  14542474 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 14542573  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     |||||  ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  14542574 aggaaaaggaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctc 14542637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 4634435 - 4634272
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||  || ||||| |||||||||||||||||||||||    
T  4634435 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaattaaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 4634336  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||| |||||||| |||||||||||||||||||||| || |||||||||||||    
T  4634335 gggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccttaaatcacccctc 4634272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 42972190 - 42972023
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||| |||||||||||||||| ||||||||||||||  |||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  42972190 acgtcgcataaagacgacgaacaaaccaacgtcgcacgaagacgacgaaaccacaaaataaaaaacgtaacaaatgtgaaaatcacttatttcaataaaa 42972091  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccgac 175  Q
    |  |||||||||||| |||||||   ||||||||||||||||||||| ||||||||||||| ||||||    
T  42972090 gcaaaatagaaaaacaagttagatgagtgattttgggtcaaaaattgaccctaaatcacccttccgac 42972023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 41 - 175
Target Start/End: Original strand, 52555716 - 52555850
Alignment:
Q  41 gcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattt 140  Q
    |||||||  |||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  52555716 gcacgaagacgacaaaatcacaaaataaaaaacgtaaaagatgtgaaaatcacttatttcaataaaagataaatagaaaaacgagttagagaggtgattt 52555815  T
Q  141 tgggtcaaaaattgtccctaaatcacccctccgac 175  Q
    |||||||||||||||||||||||||||||||||||    
T  52555816 tgggtcaaaaattgtccctaaatcacccctccgac 52555850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 734 - 896
Target Start/End: Original strand, 46719763 - 46719943
Alignment:
Q  734 caattatgttacatatagtgaagcatatattccacattgataattcgcacattgatttctttcacaaagaatatgatgtaaaag---------------- 817  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||                    
T  46719763 caattatgttacatatagtgaagcatatattccacattgataattcgcacattgatttctttcacaaagaatacgatgaaagagaatatttcaatctttc 46719862  T
Q  818 ---aaaaattcaaaaatatccaccaaaagattgacataatgatgaaatttatctgggacttatcgtcaccaactacacaaca 896  Q
       ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46719863 gcaaaaaattcaaaaatatccaccaaaagattgacataatgatgaaatttatct-ggacttatcgtcaccaactacacaaca 46719943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 16992024 - 16991865
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||||| ||| ||| ||  |||| ||| |||||||||| | || ||||| |||||||||||||||||||||||    
T  16992024 acgtcgcacaaagacgacaaacaaaacaacgtcacactaaaacggggaaaccacgaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaa 16991925  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  16991924 gggaaatagaaaaacgagttagatgggtgattttgggtcaaaaattgaccctaaatcacc 16991865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 41486727 - 41486564
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||| |||||||||||||||||||| |||| |||||| ||  |||| |||||||||||||||||||| || ||||| ||||||| |||||||||||| ||    
T  41486727 acgttgcacaaagacgacgaacaaaccaacatcgcacaaagacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatctcttatttcaatataa 41486628  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||||    
T  41486627 gggaaagagaaaaacgagttagaggggtgattttggatcaaaaattgaccctaaataacccctc 41486564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 46728882 - 46729044
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||| |||||||||||||||||| ||| ||||||| ||  |||||||||||||||| || ||||| || ||| | | |||||||||||||||||||||    
T  46728882 acgtcgtacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcacttatttcaataaaa 46728981  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||| ||||||||||||||||    
T  46728982 gggaaatagaaaaacaaattagag-ggtgattttgggtcaaaaattgaccctaaatcacccctc 46729044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 9474501 - 9474623
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  9474501 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaatacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 9474600  T
Q  108 gggaaatagaaaaacgagttaga 130  Q
     ||||| ||||||| ||||||||    
T  9474601 aggaaagagaaaaatgagttaga 9474623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 34 - 168
Target Start/End: Original strand, 54420701 - 54420834
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    ||||||||||| ||  ||||||||||||||||||||||||| || ||||| |||| |||||||||||||||||||| |||||||||||||||||||||      
T  54420701 caacgtcgcacaaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaaggaaaatagaaaaacgagttagagga 54420799  T
Q  134 gtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||||||||||||||||||| |||||||||||||    
T  54420800 gtgattttgggtcaaaaattgaccctaaatcaccc 54420834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 34115613 - 34115769
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa-cgtaacagatgcgaaaatcacttatttcaataaa 106  Q
    ||||||||||||||| ||||||| | ||||||||||||||  ||||||||||||||||||||||| || || ||||   |||||||||| ||||||||||    
T  34115613 acgtcgcacaaagacaacgaacataccaacgtcgcacgaagacgacgaaatcacaaaataaaaaaacgaaatagatataaaaatcacttctttcaataaa 34115712  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaat 163  Q
    ||||||| ||||||||||  ||||| |||||||||||||||||||||| ||||||||    
T  34115713 agggaaagagaaaaacgaactagaggggtgattttgggtcaaaaattgaccctaaat 34115769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 31601322 - 31601443
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa-cgtaacagatgcgaaaatcacttatttcaataaaag 108  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||    
T  31601322 gtcgcacaaagacgacgaacaaaccaacgtcgcaagaagacgacgaaatcacaaaataaaaaaacgaaatagatgtgaaaatcacttatttcaataaaag 31601421  T
Q  109 ggaaatagaaaaacgagttaga 130  Q
    |||||||| |||||||||||||    
T  31601422 ggaaatagcaaaacgagttaga 31601443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 28588701 - 28588553
Alignment:
Q  21 acgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa-gggaaatagaaa 119  Q
    |||||||||||| ||||||||||| ||  | | |||||||| ||| |||||| | || |||||||||||||| |||||||||||||| |||||| |||||    
T  28588701 acgacgaacaaaacaacgtcgcactaagacaaagaaatcacgaaagaaaaaatgaaatagatgcgaaaatcatttatttcaataaaaagggaaagagaaa 28588602  T
Q  120 aacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  28588601 aacgagttagaggggtgattttgggtcaaaaattgaccctaaatcaccc 28588553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 7242734 - 7242893
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    |||||||||||||||||||||||| ||||||||| ||  |||| | |||||| ||||||||| | || ||||| ||||||| |||||||||||||||       
T  7242734 tcgcacaaagacgacgaacaaatcgacgtcgcactaagacgacaatatcacagaataaaaaatgaaatagatgtgaaaatcgcttatttcaataaaataa 7242833  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    ||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  7242834 aaagagaaaaacaagttagaaaggtgattttgggtcaaaaattgaccctaaatcgcccct 7242893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 12519805 - 12519686
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    ||||||||| |||||||||||| ||||||||||| ||  ||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||    
T  12519805 tcgcacaaatacgacgaacaaaccaacgtcgcactaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaaggg 12519706  T
Q  111 aaatagaaaaacgagttaga 130  Q
    ||| ||||||||||||||||    
T  12519705 aaagagaaaaacgagttaga 12519686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 32189132 - 32188989
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaat-aaa 106  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||   |||||||| || ||||| ||||||||||||||||||| |||    
T  32189132 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaa---aaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 32189036  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaatt 153  Q
    ||||||| |||||||||| |||||| |||||| | || |||||||||    
T  32189035 agggaaaaagaaaaacgaattagaggggtgatataggatcaaaaatt 32188989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 43156928 - 43156765
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||| ||||||||||| |||||| |||| ||  |||||||||||||||  |||||||  |  ||||| |||||||||||||||||||||||    
T  43156928 acgtcgcacaaagtcgacgaacaaaacaacgttgcactaagacgacgaaatcacaaagaaaaaaacaaagtagatgtgaaaatcacttatttcaataaaa 43156829  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccc-taaatcacccctc 171  Q
     |||||||  |||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  43156828 aggaaata-taaaacgtgttagaggggtgattttgggtcaaaaattgacccgtaaatcacccctc 43156765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 51646243 - 51646088
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaac-gtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||||||||| |||  ||||||  ||  |||||||||||| ||| |||||||| || ||||| |||||||||||||||||||||||||    
T  51646243 tcgcacaaagacgacgaacaaaacaaatgtcgcattaagacgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagg 51646144  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
    |||||| |||||||| |||||| ||||||||| ||| |||||||| || |||||||    
T  51646143 gaaataaaaaaacgaattagaggggtgattttaggttaaaaattgaccataaatca 51646088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 44375226 - 44375384
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||| ||||||||||||||  |||||||||||||  ||||||||||||||||||||||| | || ||||| |||||| ||||||||||| ||||    
T  44375226 acgtcgcacacagacgacgaacaaacgaacgtcgcacgaagacgacgaaatcacaaaataaaaaaagaaatagatgtgaaaattacttatttcaaaaaaa 44375325  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcac 166  Q
        ||||||||||||| ||||||  ||||||||| ||||||||||| || ||||||||    
T  44375326 taataatagaaaaacgaattagaggagtgattttgagtcaaaaattgaccttaaatcac 44375384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 30416583 - 30416746
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||  |  ||||||||| ||| |||||    || ||||| |||||||||||||||||||||||    
T  30416583 acgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacagcgaaatcacgaaagaaaaacaaaaatagatgtgaaaatcacttatttcaataaaa 30416682  T
Q  108 gggaaatag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    ||||||||| |||||| ||||||||  |||||||||| |||||||||| || ||||| ||||||    
T  30416683 gggaaatagaaaaaacaagttagaggtgtgattttggttcaaaaattgaccataaattacccct 30416746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 38434751 - 38434612
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaac-agatgcgaaaatcacttatttcaataaa 106  Q
    |||||| |||||||||||||||||| ||||||||||| ||  |||||||||||||||| ||||||   ||  ||||| ||||||||||||||| ||||||    
T  38434751 acgtcggacaaagacgacgaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaaataaaatagatgtgaaaatcacttattttaataaa 38434652  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtc 146  Q
    || |||||||||||||||||||||| |||||||| |||||    
T  38434651 agagaaatagaaaaacgagttagaggggtgatttcgggtc 38434612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 53903735 - 53903617
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    |||||||| |||||  ||||||||||||||||||||||| | || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||      
T  53903735 caacgtcgtacgaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttagagga 53903637  T
Q  134 gtgattttgggtcaaaaatt 153  Q
    ||||||| ||||||||||||    
T  53903636 gtgatttagggtcaaaaatt 53903617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 15729943 - 15730078
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  |||||||||||||||| || ||||| || ||| | | |||||||||||||||||||||    
T  15729943 acgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagaagtgtaaatcacttatttcaataaaa 15730042  T
Q  108 gggaaatag-aaaaacgagttagagaggtgattttg 142  Q
    ||||||||| |||||| || ||||| ||||||||||    
T  15730043 gggaaatagaaaaaacaagatagaggggtgattttg 15730078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 37869379 - 37869536
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||| || |||||| |||||||||| |||  |||| |||||||| |||| ||||   || ||||| |||||||||||||||||||||||    
T  37869379 acgtcgcacaaagacaacaaacaaaccaacgtcgcaagaagacgacaaaatcacataatacaaaataaaatagatgtgaaaatcacttatttcaataaaa 37869478  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcac 166  Q
    |||||| | ||||||||||||||| | ||||||| ||| || ||||| |||||||||||    
T  37869479 gggaaagataaaaacgagttagagggatgatttt-ggtaaacaattgaccctaaatcac 37869536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 1657537 - 1657691
Alignment:
Q  17 aaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatag 116  Q
    ||||| |||||||||| ||| ||||||| ||  |||||||||||||||| ||||| || || ||||| |||||||||| ||||  |||||| | ||||||    
T  1657537 aaagatgacgaacaaaacaatgtcgcactaagacgacgaaatcacaaaagaaaaagcgaaatagatgtgaaaatcactaatttttataaaaagtaaatag 1657636  T
Q  117 aaaaacgag----ttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||||||||    |||||| |||||||||||||||||||||| ||||||||||||    
T  1657637 aaaaacgagttaattagaggggtgattttgggtcaaaaattgaccctaaatcacc 1657691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 6408593 - 6408433
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa-cgtaaca--gatgcgaaaatcacttatttcaataaa 106  Q
    |||||||||||||||||||| || ||||||||||| ||  || ||||||||| ||| |||||| || ||    |||| |||||||| ||||||||| |||    
T  6408593 gtcgcacaaagacgacgaaccaaacaacgtcgcaccaagacgtcgaaatcacgaaagaaaaaaacgaaattttgatgtgaaaatcaattatttcaacaaa 6408494  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||||| |||| |||||||    
T  6408493 agggaaatataaaaacgagttaaagaggtgattttgggtaaaaaattgacccttaatcacc 6408433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 40859797 - 40859685
Alignment:
Q  9 cgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaag 108  Q
    |||||||||||||| ||||||||| ||||||||||| ||  || ||||||||| |||  ||||||| || ||||| ||||||||||||||||||||||||    
T  40859797 cgtcgcacaaagacaacgaacaaaacaacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaag 40859698  T
Q  109 ggaaatagaaaaa 121  Q
    |||||||||||||    
T  40859697 ggaaatagaaaaa 40859685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 2945278 - 2945172
Alignment:
Q  19 agacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaa 118  Q
    |||||| ||||||| ||||||||||| |   ||| ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||    
T  2945278 agacgatgaacaaaccaacgtcgcactatgacgatgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaa 2945179  T
Q  119 aaacgag 125  Q
    |||||||    
T  2945178 aaacgag 2945172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 28990446 - 28990328
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||| ||||||||| ||||||||||| |   |||| ||||| |||||||||||||  || ||||| |||||||||||||||||||||||| ||    
T  28990446 cgcacaaagacaacgaacaaaccaacgtcgcactatgacgacaaaatcccaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagaga 28990347  T
Q  112 aatagaaaaacgagttaga 130  Q
    || ||||||||||||||||    
T  28990346 aagagaaaaacgagttaga 28990328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 20961600 - 20961480
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||| ||||||| |||||||||  ||||||||||||||  ||| |||||||||||||||||  || || ||||| |||||||||||||||||||||||    
T  20961600 acgtcgtacaaagatgacgaacaac-caacgtcgcacgaagacgatgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaa 20961504  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
    ||||||||||||||| ||| ||||    
T  20961503 gggaaatagaaaaacaagtaagag 20961480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 4622677 - 4622836
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaa-aacgtaacagatgcgaaaatcacttatttcaataa-aaggga 111  Q
    |||||||||||| ||||   | ||||||||| ||  ||||||||||||||||||||| |||| || | ||| | ||||||||||||| ||||| || |||    
T  4622677 cacaaagacgacaaacactcccacgtcgcactaagacgacgaaatcacaaaataaaagaacgaaataaatgtggaaatcacttattttaataagaaagga 4622776  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || ||||||||||| || |||||||||||||| |||||||||| || |||||||||||||    
T  4622777 aagagaaaaacgagatacagaggtgattttggatcaaaaattgaccttaaatcacccctc 4622836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 9549599 - 9549483
Alignment:
Q  28 acaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagtt 127  Q
    ||||| |||||| ||||||   ||||||||||| ||||||||||||| || ||||| | ||||||||||||||||||||||| ||| |||||||||||||    
T  9549599 acaaaccaacgtagcacgacgacgacgaaatcaaaaaataaaaaacgaaatagatgtggaaatcacttatttcaataaaaggaaaagagaaaaacgagtt 9549500  T
Q  128 agagaggtgattttggg 144  Q
    |||   |||||||||||    
T  9549499 agaagtgtgattttggg 9549483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 3673703 - 3673612
Alignment:
Q  80 gatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| ||||||||||||||| ||||||| ||||  |||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||||    
T  3673703 gatgtgaaaatcacttatttaaataaaaaggaaggagaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaatcacccctc 3673612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 1645980 - 1646060
Alignment:
Q  85 gaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| ||||  ||||||||||    
T  1645980 gaaaatcatttatttcaataaaagagaaagagaaaaacgagttagaggggtgattttgggtcaacaattaaccctaaatca 1646060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 9526314 - 9526421
Alignment:
Q  21 acgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaa 120  Q
    |||||||||||| |||||||| || ||  |||| ||||| ||||| |||||||  || ||||| ||||||||||||||||||| ||||||||| ||||||    
T  9526314 acgacgaacaaaacaacgtcgtactaaggcgacaaaatcgcaaaagaaaaaacaaaatagatgtgaaaatcacttatttcaatcaaagggaaagagaaaa 9526413  T
Q  121 acgagtta 128  Q
    ||||||||    
T  9526414 acgagtta 9526421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 3169115 - 3169033
Alignment:
Q  85 gaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||||||| ||||||||||||||| |||| | ||||||||||||||| |||||||||||||||| ||||| | ||||||||||    
T  3169115 gaaaatcatttatttcaataaaagagaaagaaaaaaacgagttagaggggtgattttgggtcaataattgactctaaatcacc 3169033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 46775823 - 46775964
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||| ||||||||  || ||||||| ||| ||  |||||||||||||||| |||||||  || ||| |  | ||| |||||||||||| |||||||    
T  46775823 cgcacaaa-acgacgaattaaacaacgtcacactaagacgacgaaatcacaaaagaaaaaacaaaatagaggtaacaattacttatttcaattaaaggga 46775921  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    || ||||||||||| ||||| | ||||||||||||||||||||    
T  46775922 aagagaaaaacgagatagagtgatgattttgggtcaaaaattg 46775964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 35338542 - 35338389
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||| |||||||||||  ||||| ||| ||  |||  |||||| ||||||||||||| || | | |  || |||||||||||||| | ||||||    
T  35338542 cgcacaaagatgacgaacaaattgacgtcccactaagacgataaaatcataaaataaaaaacgaaatacaagtaaacatcacttatttcaacataaggga 35338443  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
    || |||| || |||||| ||||||||||| ||||||||| ||| ||||||||||    
T  35338442 aagagaagaatgagttacagaggtgatttagggtcaaaatttgaccctaaatca 35338389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 50003139 - 50003220
Alignment:
Q  9 cgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaat 90  Q
    |||||||||||||||  ||||||| ||||||||||||||  ||||||||||||||||||||||||| || ||||| ||||||    
T  50003139 cgtcgcacaaagacggtgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaat 50003220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 5388595 - 5388504
Alignment:
Q  80 gatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| ||||||||||||||| ||||| ||||||  |||||||||| |||||| ||||||||  | |||||||||| ||||||||||||||||    
T  5388595 gatgtgaaaatcacttatttaaataagagggaaggagaaaaacgatttagaggggtgatttgagttcaaaaattgaccctaaatcacccctc 5388504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 4959535 - 4959697
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcac----ttatttcaat 103  Q
    |||||||||||| || ||||||||| ||| |||| || ||  |||||||||||| ||| |||||    || ||||| |||||||||    ||||||||||    
T  4959535 acgtcgcacaaaaacaacgaacaaaacaatgtcgtactaagacgacgaaatcacgaaagaaaaataa-aatagatgtgaaaatcacttatttatttcaat 4959633  T
Q  104 aaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
     ||| ||||| ||||||| ||||||||| | ||||||||| |||||||||| |||||||||||||    
T  4959634 -aaacggaaagagaaaaatgagttagagtgatgattttggatcaaaaattgaccctaaatcaccc 4959697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 26625281 - 26625131
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||||||||||||| |||  |||||| ||  | |||||||||||||| |||||||  || || || |||||||||| |||| ||||||||||||     
T  26625281 cacaaagacgacgaacaaaacaatatcgcactaaggcaacgaaatcacaaaacaaaaaactaaatag-tgtgaaaatcactaatttaaataaaagggaag 26625183  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
     ||||||||||  || | | |||||||   ||||||||||| ||||||||||    
T  26625182 aagaaaaacgatctataaaagtgatttgttgtcaaaaattgaccctaaatca 26625131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 6789842 - 6789949
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||||||||||||||  ||||  |||| ||  |||| |||||||||||||||||||| || |||||      |||||||||||||||||| |||    
T  6789842 cgcacaaagacgacgaacaaacaaacgctgcactaagacgacaaaatcacaaaataaaaaacgaaatagatg------tcacttatttcaataaaatgga 6789935  T
Q  112 aatagaaaaacgag 125  Q
    || |||||||||||    
T  6789936 aagagaaaaacgag 6789949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 11817147 - 11817061
Alignment:
Q  85 gaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||| || |||||||||  ||||||||||  ||||| |||||||||||||||||| ||  ||||||| ||||||||    
T  11817147 gaaaatcacttatttaaacaaaagggaaggagaaaaacgatgtagaggggtgattttgggtcaaaacttaaccctaaaccacccctc 11817061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 29589325 - 29589457
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaac-agatgcgaaaatcacttatttcaataaaag 108  Q
    ||||||||||||| || |||||| ||||||||||| ||  ||||||||| |||||| ||||||   ||  |||||  |||||||||||||| |||||||     
T  29589325 gtcgcacaaagacaacaaacaaaacaacgtcgcactaagacgacgaaataacaaaagaaaaaaaccaagtagatgtaaaaatcacttattttaataaaaa 29589424  T
Q  109 ggaaatagaaaaacgagttagagaggtgattttg 142  Q
    |||||||  |||||||||||||  ||||||||||    
T  29589425 ggaaata-taaaacgagttagatgggtgattttg 29589457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 662 - 707
Target Start/End: Original strand, 46719764 - 46719809
Alignment:
Q  662 aattatattacatatagtgaagcatatattccacattgataattcg 707  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  46719764 aattatgttacatatagtgaagcatatattccacattgataattcg 46719809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 23926188 - 23926061
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaaca-gatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||| | |||||| ||||| ||||| ||  |||||||||||| ||| ||||| | ||||  |||| ||||||||||||||| |||| ||||||    
T  23926188 gcacaaagacggcaaacaaaacaacgccgcactaagacgacgaaatcacgaaagaaaaacc-taactcgatgtgaaaatcacttatttaaatagaaggga 23926090  T
Q  112 aatagaaaaacgagttagagaggtgattt 140  Q
    |  |||||||| |||||||| ||||||||    
T  23926089 aggagaaaaacaagttagaggggtgattt 23926061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 44021542 - 44021638
Alignment:
Q  17 aaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    |||||||||||||||| ||||||| ||  ||  |||| ||||||||||||||||||||  | ||||| |||||||||||||| |||  |||||||||    
T  44021542 aaagacgacgaacaaaccaacgtcacattaagacgacaaaatcacaaaataaaaaacgatatagatgtgaaaatcacttattgcaacgaaagggaaa 44021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 46386814 - 46386893
Alignment:
Q  87 aaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcac 166  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||  | ||||||| | ||||||| ||| ||||||||    
T  46386814 aaatcatttatttcaataaaagggaaagagaaaaacaagttagagatataattttggataaaaaattatccgtaaatcac 46386893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 38170167 - 38170233
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaa 120  Q
    |||||||| |||||||||||| || | ||| ||||||||||||||||||| ||||||||| ||||||    
T  38170167 gaaatcacgaaataaaaaacgaaataaatgtgaaaatcacttatttcaatgaaagggaaaaagaaaa 38170233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 26576525 - 26576611
Alignment:
Q  67 aaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    |||||||| || ||||| ||| |||| |||||| |||||| |||||||| |||||| | ||||||  |||||||||||||||||||||    
T  26576525 aaaaaacgaaatagatgtgaatatcatttatttgaataaa-gggaaatataaaaacaaattagaggtgtgattttgggtcaaaaattg 26576611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 29474370 - 29474429
Alignment:
Q  62 aaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaa 121  Q
    |||| |||||||| || ||||  | |||||||||||||||||||||||||||||||||||    
T  29474370 aaaaaaaaaaacgaaatagatatgtaaatcacttatttcaataaaagggaaatagaaaaa 29474429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 1125093 - 1124929
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||| |||||||||  ||||| |||| |||||| |   |||||||||||| ||| |||||  | || ||||| ||||||||||||||||||||||     
T  1125093 acgtcgcaaaaagacgacagacaaaacaacatcgcactatgacgacgaaatcacgaaagaaaaat-gaaatagatgtgaaaatcacttatttcaataaat 1124995  T
Q  108 gggaaatag------aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
     ||||||||      ||||| ||||||||    ||||||||||||||||||||   ||||||||||    
T  1124994 aggaaataggaaaaaaaaaatgagttagatgaatgattttgggtcaaaaattgattctaaatcacc 1124929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 33020959 - 33021051
Alignment:
Q  80 gatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttaga-gaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| ||||||||||||||| |||| |||||||  ||||||| || ||||| | |||||||| ||||||||| ||| ||| ||| ||||||||    
T  33020959 gatgtgaaaatcacttatttaaatagaagggaagaagaaaaatgatttagatggggtgatttggggtcaaaatttgacccaaaaccacccctc 33021051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 922 - 1016
Target Start/End: Original strand, 46720326 - 46720428
Alignment:
Q  922 actttttgaa--ctgcttgccaacaaagctttga--ctagtatg-agcacattcaaaata-ctac-ctaacataaaagacaaa-tgaatggagctcttat 1013  Q
    ||||||||||  ||||||||||||||||||||||   ||||||| ||||||||||||||| |||| ||| ||||||||||||| ||||  ||||||||||    
T  46720326 actttttgaaacctgcttgccaacaaagctttgaacttagtatgaagcacattcaaaatacctacactaccataaaagacaaattgaaatgagctcttat 46720425  T
Q  1014 agt 1016  Q
    |||    
T  46720426 agt 46720428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 30470085 - 30470175
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaa 102  Q
    |||||||||||||||||| |||||  ||||||||||||||  ||||||| ||||||||||||| |   || | ||| ||||||||||||||||||    
T  30470085 acgtcgcacaaagacgacaaacaac-caacgtcgcacgaagacgacgaa-tcacaaaataaaacaa--aatatatgtgaaaatcacttatttcaa 30470175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 2e-73; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 7640318 - 7640482
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7640318 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaa 7640417  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctcc 172  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  7640418 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctcc 7640482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 3390584 - 3390421
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  3390584 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 3390485  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  3390484 gggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 3390421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 25771597 - 25771434
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  25771597 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 25771498  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  25771497 gggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 25771434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 27024101 - 27024261
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  27024101 acgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 27024200  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||||  ||||||| |||||||| ||||||||||||||||||| || |||||||||||||    
T  27024201 gggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaaatgaccctaaatcaccc 27024261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 27191299 - 27191460
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  27191299 acgtcgcacaaagacgacgaacaac-caacgtcgtacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 27191396  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  27191397 gggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctc 27191460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 27841113 - 27841274
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  |||||||| |||||  ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  27841113 acgtcgcacaaagacgacgaacaac-caacgtcgtacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 27841210  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  27841211 gggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcatccctc 27841274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 25516642 - 25516483
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||  ||||||||||||||  ||| ||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||    
T  25516642 gtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgaagaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagg 25516545  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  25516544 gaaatagaaaaatgagttagaggggtgattttgggtcaaatattgaccctaaatcacccctc 25516483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 5930575 - 5930416
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||| |||||||||||| |||| |||||||||  ||||||||||||||||||||||||| || ||||| ||||||||||||||  |||||||    
T  5930575 acgtcgcacaaaaacgacgaacaaaccaacatcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttattgaaataaaa 5930476  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||  ||||||||||||    
T  5930475 gggaaacagaaaaacgagttagagggatgattttgggtcaaaaattaaccctaaatcacc 5930416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 43567025 - 43566866
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  43567025 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 43566928  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  43566927 aggaaatagaaaaacgagttagag-ggtgattttgggtcaaaaattgaccct-aatcacccctc 43566866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 44167673 - 44167834
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||| |||| | |||||||||||| |||    
T  44167673 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaatt-acttatttcaattaaa 44167770  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||||    
T  44167771 ggaaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccatatatcacccctc 44167834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 3603137 - 3602977
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||| || ||||  |||||||||||||||||| ||||    
T  3603137 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgaaatagatatgaaaatcacttatttcaagaaaa 3603038  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    || ||| |||||||| |||||||| |||||||||| ||||||| ||| || ||||||||||    
T  3603037 ggaaaagagaaaaacaagttagaggggtgattttgagtcaaaagttgaccataaatcaccc 3602977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 6090042 - 6089882
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||| || ||||||  |||| |||||||||  |||||||||||||||||||||  || || ||||| |||||||||||||||||||||||    
T  6090042 acgtcgcacaaagaagatgaacaac-caacatcgcacgaagacgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaa 6089946  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||    
T  6089945 gggaaatagaaaaacgaattagaggggtgattttgggtcaaaaattgaccttaaatcacccctc 6089882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 36508081 - 36507924
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||| ||||||||  ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||| | ||||||||||||||||    
T  36508081 acgtcgcacaaagacaacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaatt-acttatttcaataaaa 36507984  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    || ||||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||    
T  36507983 ggaaaatagaaaaatgagtcagagaggtgattttgggtcaaaaattgaccctaagtcacc 36507924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 40125541 - 40125378
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||  |||||| |||||| |||| ||   ||| |||||||||||||||||||  || ||||| ||||||||| |||||||||||||    
T  40125541 acgtcgcacaaagacgaaaaacaaaacaacgttgcactaagatgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacgtatttcaataaaa 40125442  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    | ||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||    
T  40125441 gagaaatagaaaaacaagttagaggggtgattttgggtcaaaaattaaccctaaatcacccctc 40125378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 42105730 - 42105877
Alignment:
Q  24 acgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacg 123  Q
    ||||||||| |||||| | || ||  |||||||||||||||| |||||||  || ||||| |||| ||||||||||||||||||||||||||||||||||    
T  42105730 acgaacaaaacaacgttgtactaagacgacgaaatcacaaaagaaaaaacaaaatagatgtgaaagtcacttatttcaataaaagggaaatagaaaaacg 42105829  T
Q  124 agttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  42105830 agttagagtggtgattttgggtcaaaaattgaccctaaagcacccctc 42105877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 43929318 - 43929441
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||| ||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  43929318 acgtcgcacgaagacgacgaacaaaccaatgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaacatatgtgaaaatgacttatttcaataaaa 43929417  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
    |||||||| |||||||||||||||    
T  43929418 gggaaatacaaaaacgagttagag 43929441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 9715510 - 9715667
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||| ||| ||||||||||||| | || ||  ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |    
T  9715510 cgcacaaagatgacaaacaaatcaacgttgtactaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaaggaa 9715609  T
Q  112 aatag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    || || ||||||||||| ||||| ||||||||| |||||||||| |||||||||||||    
T  9715610 aaaagaaaaaacgagttggagagatgattttggatcaaaaattgaccctaaatcaccc 9715667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 37883802 - 37883642
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    |||||||||||||||||||||| ||||||||||| ||  | |||||| ||| ||| |||||||| || |||||  |||||||||||||| ||||||| ||    
T  37883802 tcgcacaaagacgacgaacaaaacaacgtcgcactaagacaacgaaaccacgaaagaaaaaacgaaatagatgttaaaatcacttattttaataaaaagg 37883703  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||| |||||| ||||||||||| | |||||||| ||||||||||||||||    
T  37883702 aaatagaaaaacgaattagaggggtgattttggattaaaaattgaccctaaatcacccctc 37883642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 25623011 - 25623170
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||||| ||| ||||||| ||  |||||||||||| ||| |||||||  || ||||| |||||||||||||||||||||||||||    
T  25623011 cgcacaaagacgacgaacaaaacaatgtcgcactaagacgacgaaatcacgaaagaaaaaacaaaatagatgtgaaaatcacttatttcaataaaaggga 25623110  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || |||||||||||||| |  ||||||||||||||||||||||    |||||||||||||    
T  25623111 aagagaaaaacgagttatatgggtgattttgggtcaaaaattgataataaatcacccctc 25623170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 3465083 - 3464948
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    ||||||||||| ||  ||||||||||||||||||||||||| || ||||| |||  |||||||||||||||||||| ||||||||||||||||||| | |    
T  3465083 caacgtcgcacaaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaa--tcacttatttcaataaaaggaaaatagaaaaacgagttagtgtg 3464986  T
Q  134 gtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  3464985 gtgattttggatcaaaaattgaccctaaatcacccctc 3464948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 25237290 - 25237451
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||| ||||||||||| ||  |||||||||||  ||| |||||||| || ||||| |||||| ||||||||||| ||||||    
T  25237290 gtcgcacaaagacgacgaacaaaacaacgtcgcactaagacgacgaaatcatgaaagaaaaaacgaaatagatgtgaaaataacttatttcaacaaaagg 25237389  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||  ||||||| |||| ||||||||||||||| |||||| ||| | ||||||||||||||    
T  25237390 gaaagggaaaaacaagttcgagaggtgattttggatcaaaagttgactctaaatcacccctc 25237451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 16879927 - 16880084
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||| |||||||||  || | ||| |||||||||||||||||||||||    
T  16879927 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaa 16880026  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||      ||||||||||| |||| |||||||||||||||||||||| ||  ||||||||||||    
T  16880027 gg------gaaaaacgagtgagaggggtgattttgggtcaaaaattgaccaaaaatcacccctc 16880084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 19580964 - 19581128
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  |||| ||||||| ||| |||||| | || ||||  |||||||||||||||||||||||    
T  19580964 acgtcgcacaaagacgacgaacaaaacaatgtcgcactaagacgacaaaatcacgaaagaaaaaatgaaatagatatgaaaatcacttatttcaataaaa 19581063  T
Q  108 gggaaat-agaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||| | ||||||||||||||| |||||||||| || |||||||| ||| ||||||||||||    
T  19581064 gggaaataaaaaaaacgagttagaggggtgattttgtgttaaaaattgacccaaaatcacccctc 19581128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 41177010 - 41176851
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaa--atcacttatttcaataa 105  Q
    ||||||||||||||||||||||||  ||||||||||||||      ||||||||||||||||||||| || ||||| ||||  |||||||||||||||||    
T  41177010 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaa------gaaatcacaaaataaaaaacgaaatagatgtgaaatcatcacttatttcaataa 41176918  T
Q  106 aagggaaatagaaaaa-cgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||| |||||||||||| |||||||||  |||| ||||||||||||||||| ||||||||||||||||    
T  41176917 aagagaaatagaaaaaacgagttagatgggtggttttgggtcaaaaattgaccctaaatcacccctc 41176851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 41842095 - 41841938
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    |||||||||||||||||||| ||||||||||| ||  ||||||||||||||||  | ||||| || ||||| ||||||| ||||||||||||||||||||    
T  41842095 gcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcacaaaa--agaaacgaaatagatgtgaaaatcgcttatttcaataaaagggaa 41841998  T
Q  113 atagaaaaacgagttagagaggtga-ttttgggtcaaaaattgtccctaaatcacccctc 171  Q
    | |||||||||||||| || ||||| ||||||||||||||||| || ||||||| |||||    
T  41841997 agagaaaaacgagttaaaggggtgatttttgggtcaaaaattgaccataaatcaaccctc 41841938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 29812581 - 29812736
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa-cgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    ||||||||||||||||||||| || |||||||| ||  |||||||||||| ||| |||||| || || ||||| | |||||||||||||||||||||||     
T  29812581 cgcacaaagacgacgaacaaaaca-cgtcgcactaagacgacgaaatcacgaaagaaaaaaacgaaatagatgtggaaatcacttatttcaataaaaggt 29812679  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    ||| ||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||    
T  29812680 aaagagaaaaatgagttagaggggtgattttgtgtcaaaaattgaccctaaatcacc 29812736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 10589191 - 10589028
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| ||| ||||||  ||||||| ||||||| ||| ||  ||  |||||||| |||  ||||||| || ||||| |||||||||||||||||||||||    
T  10589191 acgtcacactaagacggagaacaaaacaacgtcacactaagacggagaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 10589092  T
Q  108 gggaaataga-aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  10589091 gggaaatagaaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccct 10589028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 26491454 - 26491292
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| |||||||||||  |||||| ||||||||||| ||  |||||||||||| ||| |||||| | || ||||| |||| ||||||||||||||||||    
T  26491454 acgtcacacaaagacgaaaaacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaaatgaaatagatgtgaaa-tcacttatttcaataaaa 26491356  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||  | ||||| |||||||    
T  26491355 gggaaatagaaaaatgagttaaaggggtgattttgggtcaaaaattgaacttaaattacccctc 26491292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 19953718 - 19953588
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||||||| |||||  |||||||| || ||  ||||||||| || ||| |||||||| || ||||| |||||||||||||||||||||||||||    
T  19953718 cgcacaaagacgacaaacaacacaacgtcgtactaagacgacgaaattacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaaggga 19953619  T
Q  112 aatagaaaaacgagttagagaggtgattttg 142  Q
    || |||||||||||||||| |||||||||||    
T  19953618 aagagaaaaacgagttagataggtgattttg 19953588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 7443528 - 7443672
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||  || ||||||||| |||  ||||||| || ||||| |||||| ||||||||||||||||    
T  7443528 acgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaattacttatttcaataaaa 7443627  T
Q  108 gggaaatag-aaaaacgagttagagaggtgattttgggtcaaaaa 151  Q
    || |||||| |||||| | |||||  |||||||||||||||||||    
T  7443628 ggaaaatagaaaaaacaaattagatgggtgattttgggtcaaaaa 7443672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 16992060 - 16992165
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||| |||||||||  || | ||| |||||||||||||||||||||||    
T  16992060 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaa 16992159  T
Q  108 gggaaa 113  Q
    ||||||    
T  16992160 gggaaa 16992165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 38822224 - 38822115
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||  || || ||||| |||||||||||||||||| ||||    
T  38822224 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaacaaaa 38822128  T
Q  108 gggaaatagaaaa 120  Q
    |||||||||||||    
T  38822127 gggaaatagaaaa 38822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 29734342 - 29734199
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||| |||| |||||| |||||| ||||||| ||| ||  |||| ||||||| ||| ||||| || || || || |||||||||||||||||||||||    
T  29734342 acgtcgtacaacgacgacaaacaaaacaacgtcacactaagacgacaaaatcacgaaagaaaaagcgaaataggtgtgaaaatcacttatttcaataaaa 29734243  T
Q  108 gggaaataga-aaaacgagttagagaggtgattttgggtcaaaa 150  Q
    |||||||||| ||||||||||||||  |||||||||||||||||    
T  29734242 gggaaatagaaaaaacgagttagaggagtgattttgggtcaaaa 29734199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 13268724 - 13268563
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||  |||| ||| ||| |||  ||||||| || ||||| |||||||||||||||||| ||||    
T  13268724 acgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacgacaaaaccacgaaa-gaaaaacgaaatagatgtgaaaatcacttatttcaacaaaa 13268626  T
Q  108 gggaaatagaaaaacgagttaga-gaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||| || || ||||||||||||| | ||||||||||| ||||||| || || |||||||||||||    
T  13268625 gggcaagag-aaaacgagttagagggggtgattttggttcaaaaa-tgaccataaatcacccctc 13268563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 44441467 - 44441378
Alignment:
Q  79 agatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||| |||||||||||||||| ||||||| |||| | |||||||||||||| | ||||||||||||||||||||| | |||| ||||||    
T  44441467 agatgtgaaaatcacttatttcgataaaagagaaagataaaaacgagttagataagtgattttgggtcaaaaattgactctaagtcaccc 44441378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 2251307 - 2251470
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| || |||||||| ||  ||||||||||||||||  |  | |  |   |||| ||||||||||||||| |||| ||    
T  2251307 acgtcgcacaaagacgacaaacaaaacagcgtcgcactaagacgacgaaatcacaaaaggatgacctaattcgatgtgaaaatcacttatttaaatagaa 2251406  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||  |||||||||| ||||||  ||||||| ||||||||| ||| ||| ||| ||||||||    
T  2251407 gggaaggagaaaaacgatttagaggagtgatttggggtcaaaatttgacccaaaaccacccctc 2251470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 11931056 - 11930925
Alignment:
Q  18 aagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaataga 117  Q
    ||||| ||||||||| ||||||| ||| ||  ||| ||||||||||||||||||| | || |  || ||||| || ||||||||||| |||||||| |||    
T  11931056 aagacaacgaacaaaccaacgtcacactaagacgatgaaatcacaaaataaaaaatgaaatacttgtgaaaaacatttatttcaatacaagggaaaaaga 11930957  T
Q  118 aaaacgagttagagaggtgattttgggtcaaa 149  Q
    |||||||||||||||  |||||| || |||||    
T  11930956 aaaacgagttagagacatgatttaggatcaaa 11930925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 35353795 - 35353641
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||||||||| ||  |||||||||||| ||| ||||| |  |   ||||  |||||||||||||| |||||||    
T  35353795 acgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaacctaattcgatgtaaaaatcacttatttaaataaaa 35353696  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||  |||||||||         |||||||| ||||||||||||| ||||||| ||||||||    
T  35353695 gggaaggagaaaaacg---------ggtgatttggggtcaaaaattgaccctaaaccacccctc 35353641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 15673969 - 15674099
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatag-------------aaaaacgagttagagaggtgattt 140  Q
    |||||||||||| || ||||| || ||||| | ||||||||||||||||||||||||||||||             |||||| ||||||||  |||||||    
T  15673969 gaaatcacaaaaaaagaaacgaaatagatgggtaaatcacttatttcaataaaagggaaatagaaaaaaaaaaaaaaaaaacaagttagaggagtgattt 15674068  T
Q  141 tgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||| ||||||||||||||||    
T  15674069 tgggtcaaaaattgaccctaaatcacccctc 15674099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 5071334 - 5071495
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||| |||||| |||||| |||| ||   |||||||||||||||  |||| |  |    ||| ||||||||||||||| ||||||||     
T  5071334 gtcgcacaaagacgacaaacaaaacaacgttgcactaagatgacgaaatcacaaaaggaaaacctaatttaatgtgaaaatcacttatttaaataaaaga 5071433  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||  |||||||||| |||||  ||||||||  |||||||||||| || |||| ||||||||    
T  5071434 gaagaagaaaaacgatttagaagggtgatttaaggtcaaaaattgaccataaaccacccctc 5071495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 34480048 - 34479951
Alignment:
Q  68 aaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||| ||||||  | |||| |  ||||||||||||| |||||||| ||||| ||||    
T  34480048 aaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaattgtgttataagggtgattttgggtaaaaaattgaccctatatca 34479951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 3397943 - 3398102
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||| |||  ||||| ||| ||||||| ||  |||||||||||| ||| ||||| |  |   |||| ||| |||||||| || |||||||||    
T  3397943 gtcgcacaaagatgacagacaaaacaatgtcgcacaaagacgacgaaatcacgaaagaaaaatctaatttgatgtgaagatcacttacttaaataaaagg 3398042  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccc 169  Q
    |||  |||||||| |  ||||| |||||| | ||||||||||||| || |||| ||||||    
T  3398043 gaaggagaaaaacaatgtagaggggtgatctggggtcaaaaattgaccttaaaccacccc 3398102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 43929262 - 43929301
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaa 47  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  43929262 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaa 43929301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 11550590 - 11550648
Alignment:
Q  85 gaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgg 143  Q
    ||||||||||||||||||||||| | ||| ||||||| ||||||||| |||| ||||||    
T  11550590 gaaaatcacttatttcaataaaatgtaaaaagaaaaatgagttagaggggtggttttgg 11550648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 24500592 - 24500538
Alignment:
Q  87 aaatcacttatttcaataaaagggaaataga-aaaacgagttagagaggtgattt 140  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||| ||||||||    
T  24500592 aaatcacttatttcaataaaatggaaatagaaaaaacaagttagaggggtgattt 24500538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 44951571 - 44951522
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaa 57  Q
    |||||| |||||||||||||||||| ||||||||||||||  ||||||||    
T  44951571 acgtcgtacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaa 44951522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 10589247 - 10589211
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcac 44  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10589247 acgtcgcacaaagacgacgaacaaaacaacgtcgcac 10589211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 22652002 - 22652040
Alignment:
Q  86 aaaatcacttatttcaataaaagggaaatagaaaaacga 124  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  22652002 aaaatcacttatttaaataaaagggaaaaagaaaaacga 22652040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 38105338 - 38105244
Alignment:
Q  60 acaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    |||||| |||||||  || ||||| |||||||||||| || ||||||| ||||  || |||| || ||| || |||||||| |||||||||||||    
T  38105338 acaaaaaaaaaaactaaatagatgtgaaaatcacttagttaaataaaatggaataagcaaaatgatttaaaggggtgatttggggtcaaaaattg 38105244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 4878698 - 4878794
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcg-aaaatcacttatttcaata 104  Q
    ||||||||||||||||||||||||| |||| |||||| ||  |||| ||||||| ||| ||||||   || ||||| | |||||||||||||| ||||    
T  4878698 acgtcgcacaaagacgacgaacaaaacaacatcgcacaaagacgac-aaatcacgaaagaaaaaataaaatagatgtgaaaaatcacttattttaata 4878794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 5e-68; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 30992785 - 30992952
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30992785 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaagacgacaaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaa 30992884  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccgac 175  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||  || |||||||||||||||||    
T  30992885 gggaaatagaaaaacaagttagaggggtgattttgggtcaaaaattaaccttaaatcacccctccgac 30992952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 47749886 - 47749723
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  47749886 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacaacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 47749787  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||| || |||||||||||||    
T  47749786 gggaaagagaaaaacgagatagaggggtgattttgggtcaaaaattgaccataaatcacccctc 47749723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 40775419 - 40775256
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  40775419 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 40775320  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||||||||| || ||||||||||| |||||||||| ||||||||||||||||    
T  40775319 gggaaaaggaaaaacgagttataggggtgattttggatcaaaaattgaccctaaatcacccctc 40775256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 43807112 - 43807279
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||| |||||||||| |||| |||||||||  ||||||||||||||||||||| |||||||||||| ||||||  ||||||| |||||||    
T  43807112 acgtcgcacaaagatgacgaacaaaccaacatcgcacgaagacgacgaaatcacaaaataaaatacgtaacagatgtgaaaattgcttattttaataaaa 43807211  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccgac 175  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  43807212 gagaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgaccataaatcacctctccgac 43807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 26017620 - 26017765
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| |||| |||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26017620 acgtcgcacaaagacgacgaacaaaccaacatcgcacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaa 26017719  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaatt 153  Q
    |||||||| |||||||| |||||| ||||||||| |||||||||||    
T  26017720 gggaaataaaaaaacgaattagaggggtgattttaggtcaaaaatt 26017765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 25855182 - 25855342
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||| || ||||  |||||||||||||||||||||||    
T  25855182 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacaaaatcacaaaataaaaaacgaaatagatatgaaaatcacttatttcaataaaa 25855281  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    |||||| ||||||||||||||||| | ||||||||| |||||||||| |||||||||||||    
T  25855282 gggaaagagaaaaacgagttagagggatgattttggatcaaaaattgaccctaaatcaccc 25855342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 24475493 - 24475332
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||    ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  24475493 acgtcgcacaaagacgacgaacaac-caacgtcgcacgtggacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 24475396  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  24475395 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctc 24475332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 24470545 - 24470384
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||    ||| ||||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  24470545 acgtcgcacaaagacgacgaacaac-caacgtcgcacgttgacgatgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 24470448  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  24470447 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgcccctaaatcacccctc 24470384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 49167077 - 49166919
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||||||||| |||||||||||| || ||||| |||| ||||||||||||||||||    
T  49167077 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacgaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 49166980  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||    
T  49166979 gggaaatagaaaaacaagttagaggggtgattttaggtcaaaaattgaccctaaatcaccc 49166919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 8611586 - 8611747
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||  ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||| ||||||||||||||||||    
T  8611586 acgtcgcacaaagacgactaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaa-tcacttatttcaataaaa 8611683  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||||||||||||| |||||| ||||||||||||  | ||||||||||||||||    
T  8611684 gggaaatagaaaaacgagttagaggggtgatattgggtcaaaaagagaccctaaatcacccctc 8611747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 23732359 - 23732518
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| ||||||||| |||||||||||||  ||    
T  23732359 cgcacaaagatgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacatatttcaataaaataga 23732458  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||    
T  23732459 aagagaaaaacgagttagagaagtgattttgagtcaaaaattgaccttaaatcacccctc 23732518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 28015509 - 28015345
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||  ||  |||||||||||||||| ||  |||| || ||||| | |||||||||||||||||||||    
T  28015509 acgtcgcacaaagacgacgaacaaaacaaggtcgcattaagacgacgaaatcacaaaaaaaggaacgaaatagatgtgtaaatcacttatttcaataaaa 28015410  T
Q  108 gggaaataga-aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||| ||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  28015409 gggaaatagaaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctc 28015345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 7986044 - 7985883
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| ||||||||||||||||||| ||||||| ||||||   ||||||||||||||||| |||| | || ||||| |||||||| ||||||||||| ||    
T  7986044 acgtcacacaaagacgacgaacaaaccaacgtcacacgaagatgacgaaatcacaaaatacaaaatgaaatagatgtgaaaatcatttatttcaatagaa 7985945  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccc 169  Q
    |||||| ||||||||||||||||| | || |||| |||||||| ||| ||||||||||||||    
T  7985944 gggaaagagaaaaacgagttagagggatggttttaggtcaaaagttgaccctaaatcacccc 7985883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 13008639 - 13008793
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||||| ||||||||||| ||  |||| |||||||||||||||||||  || ||||| |||||||||||||||||||||||| ||    
T  13008639 cgcacaaagacgacgaacaaaccaacgtcgcactaagacgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagaga 13008738  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    || |||||||| |||||||| ||| ||||||  | |||||||| ||||||||||||    
T  13008739 aagagaaaaactagttagag-ggttattttgaattaaaaattgaccctaaatcacc 13008793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 43483752 - 43483583
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||  || |||||||||||||  ||||||| || ||||| |||||||||||||||||||||||    
T  43483752 acgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacaaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 43483653  T
Q  108 gggaaataga------aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||      ||||| |||||||| | ||||||| | |||||||||| ||||||||||| ||||    
T  43483652 gggaaatagaaaaaaaaaaacaagttagagggatgattttagatcaaaaattgaccctaaatcactcctc 43483583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 9933999 - 9933866
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||  || ||||||||||||| |||||||| || |||||  |||||||||||||| |||||||    
T  9933999 acgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacaaaagaaaaaacgaaatagatgtaaaaatcacttattttaataaaa 9933900  T
Q  108 gggaaatagaaaaacgagttagagaggtgatttt 141  Q
    |||||||||||| || |||||||| |||||||||    
T  9933899 gggaaatagaaatactagttagaggggtgatttt 9933866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 42490853 - 42490713
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaa-tcacttatttcaataaaag 108  Q
    ||||||||||| | ||||||||| ||||||| ||||||  ||| |||||||||||||||| |||| || ||||| ||||| ||||||||||| |||||||    
T  42490853 gtcgcacaaaggcaacgaacaaaccaacgtcacacgaagacgatgaaatcacaaaataaagaacgaaatagatgtgaaaaatcacttatttcgataaaag 42490754  T
Q  109 ggaaatagaaaaacgagttagagaggtgattttgggtcaaa 149  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  42490753 ggaaaaagaaaaacgagttagaggggtgattttgggtcaaa 42490713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 44681612 - 44681454
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| |||||| |||||||||||| ||||||| |||  |  |||||||| |||||||| |||| || || ||||| |||||||||||||||||||||||    
T  44681612 acgtcccacaaaaacgacgaacaaaccaacgtcacactgagacgacgaaaccacaaaatcaaaa-cgaaatagatgtgaaaatcacttatttcaataaaa 44681514  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||    
T  44681513 gggaaaaagaaaaacgagttagag-ggtgattttaggtcaaaaattgaacctaaatcaccc 44681454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 135107 - 135229
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||| |||||||||||| ||||||||||||||  |||||||||||||||||| |||| | || ||||| ||||||||| |||||||||||||    
T  135107 acgtcgcacaaaaacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaatacaaaatgaaatagatgtgaaaatcacctatttcaataaaa 135206  T
Q  108 gggaaatagaaaaacgagttaga 130  Q
    |||||| ||||||| ||||||||    
T  135207 gggaaagagaaaaatgagttaga 135229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 47156543 - 47156388
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||| |||||||||||||||||||  ||||||| ||||||  |||||||||||||||||||||  || || ||||| |||||||||||||||||||||||    
T  47156543 acgttgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaa 47156447  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    || ||||||  ||||||||||||| | ||||||||| |||||||||| || ||||||||||    
T  47156446 ggaaaatag--aaacgagttagagggatgattttggatcaaaaattgaccttaaatcaccc 47156388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 8319462 - 8319303
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    |||||||||||||||||||| |||||||| |||||  |||| |||||||||||||||||||  || | ||| ||||||||||||||| ||||||| ||||    
T  8319462 gcacaaagacgacgaacaaaccaacgtcgtacgaagacgacaaaatcacaaaataaaaaactaaatatatgtgaaaatcacttattttaataaaatggaa 8319363  T
Q  113 atag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    | || |||||||||||| |  |||||||||||||||||| ||| || |||||||| ||||    
T  8319362 aaagaaaaaacgagttacatgggtgattttgggtcaaaagttgaccataaatcactcctc 8319303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 16263538 - 16263376
Alignment:
Q  9 cgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaag 108  Q
    |||||||||| ||||||||||||| ||| ||||||| ||  |||||||||||||| | || ||||| || | ||| | ||| ||||||||||||||||||    
T  16263538 cgtcgcacaaggacgacgaacaaaacaaggtcgcactaacacgacgaaatcacaacaaaagaaacgaaata-atgtgtaaaacacttatttcaataaaag 16263440  T
Q  109 ggaaatag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||||| |||||| |||||||||||||||||||| ||||||||||  |||||||||||||||    
T  16263439 agaaataggaaaaacaagttagagaggtgattttggatcaaaaattgatcctaaatcacccctc 16263376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 38649319 - 38649482
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||| ||| ||| ||  |||||| ||||||||| || ||||| || ||||| | |||||||||||||||||||||    
T  38649319 acgtcgcacaaagacgacaaacaaaacaaggtctcactaagacgacgagatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaa 38649418  T
Q  108 gggaaatag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    || |||||| |||||  | |||||| |||||||||||||||||||||| | |||||||||||||    
T  38649419 ggaaaatagaaaaaataaattagaggggtgattttgggtcaaaaattgactctaaatcacccct 38649482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 5025018 - 5025182
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  |||||||||||||||| || ||||| || ||| | | ||||||| |||||||||||||    
T  5025018 acgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcac-tatttcaataaaa 5025116  T
Q  108 gggaaatag-aaaaacgagttagagaggtgattttgggtc-aaaaattgtccctaaatcacccctc 171  Q
    ||||||||| |||||  |||||||| |||||||||||||| |||||||| | | ||||||||||||    
T  5025117 gggaaatagaaaaaataagttagaggggtgattttgggtcaaaaaattgactcaaaatcacccctc 5025182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 29804637 - 29804801
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaaca-gatgcgaaaatcacttatttcaataaa 106  Q
    |||||||||||||||||| |||||| || |||||||| |   ||||||||||||||||  |||||| |||   |||| ||||||||||||||| |||| |    
T  29804637 acgtcgcacaaagacgacaaacaaaacagcgtcgcactatgacgacgaaatcacaaaaggaaaaacctaattcgatgtgaaaatcacttatttaaataga 29804736  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  |||||||||| |||||| |||||||| ||||||||||||| ||||||| ||||||||    
T  29804737 agggaaggagaaaaacgatttagaggggtgatttggggtcaaaaattgaccctaaaccacccctc 29804801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 10250451 - 10250603
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||||||||||||| ||||||| |||  |  || ||||||||| ||| |||||||| || ||||| ||||||||||||||||||||||| ||||     
T  10250451 cacaaagacgacgaacaaaacaacgtcacaccga--cggcgaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaaaggaat 10250548  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||||||||| |||||| ||||||||||| || ||||||| ||||  |||||||    
T  10250549 tagaaaaacgaattagaggggtgattttggatcgaaaattgaccctttatcaccc 10250603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 39090242 - 39090127
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaataga-aaaacgagttagaga 132  Q
    ||||||||||| ||   ||||||||||||||| |||||| | || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39090242 caacgtcgcacaaagatgacgaaatcacaaaagaaaaaatgaaatagatgtgaaaatcacttatttcaataaaagggaaatagaaaaaacgagttagaga 39090143  T
Q  133 ggtgattttgggtcaa 148  Q
    ||||||||||| ||||    
T  39090142 ggtgattttggatcaa 39090127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 33530433 - 33530591
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    |||||||||||||||||||||  |||||||| || ||  |||| ||||||| ||| | |||||| || |||||  ||||||||||||||||||||||  |    
T  33530433 tcgcacaaagacgacgaacaacacaacgtcgtactaagacgacaaaatcacgaaagagaaaacgaaatagatgtaaaaatcacttatttcaataaaaaag 33530532  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||| ||||||||| ||||||| |||| |||||||||  |||||| ||||||||||||||||    
T  33530533 aaaaagaaaaacgggttagaggggtggttttgggtc--aaattgaccctaaatcacccctc 33530591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 40476859 - 40476741
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  |||||| | |||||  ||||||||||||||||||||||||| || ||||| |||| | ||||||||||||||||    
T  40476859 acgtcgcacaaagacgacgaacaac-caacgttgtacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-taacttatttcaataaaa 40476762  T
Q  108 gggaaatagaaaaacgagtta 128  Q
    || ||||||||||||||||||    
T  40476761 ggaaaatagaaaaacgagtta 40476741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 35661650 - 35661535
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    ||||||||||||||  |||||||||||||||||||||||   || ||||| ||| |||||||||||||||||||||||||  ||||||||||||||||      
T  35661650 caacgtcgcacgaagacgacgaaatcacaaaataaaaaataaaatagatgtgaagatcacttatttcaataaaagggaaaaggaaaaacgagttagagta 35661551  T
Q  134 gtgattttgggtcaaa 149  Q
    ||||||| ||||||||    
T  35661550 gtgatttagggtcaaa 35661535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 37399752 - 37399635
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    ||||||||||| ||  |||||||||| ||||||||||||   || ||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |    
T  37399752 caacgtcgcacaaagacgacgaaatctcaaaataaaaaataaaatagatgtgaaaatcatttatttcaataaaagggaaagagaaaaacgagttagaggg 37399653  T
Q  134 gtgattttgggtcaaaaa 151  Q
    |||||||| ||| |||||    
T  37399652 gtgattttaggtaaaaaa 37399635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 35 - 168
Target Start/End: Original strand, 35141740 - 35141875
Alignment:
Q  35 aacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg--gaaatagaaaaacgagttagaga 132  Q
    |||||||||| ||  ||||| ||||||||||||||||| | || ||||| |||||||||||||||||||||||||   ||| | ||||| ||||||||      
T  35141740 aacgtcgcactaagacgacggaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaaggttaaaagacaaaaatgagttagaag 35141839  T
Q  133 ggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||||||| |||||||||||| |||||||||||||    
T  35141840 ggtgatttttggtcaaaaattgaccctaaatcaccc 35141875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 35135152 - 35135308
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||||| ||||||| ||||||| ||| || ||||  ||||||||| |||||||||| || ||||| ||||||||| ||||||||||||| |||||    
T  35135152 cacaaagacga-gaacaaaccaacgtcacactaatccgataaaatcacaatataaaaaacgaaatagatgtgaaaatcacgtatttcaataaaaaggaaa 35135250  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     | ||||||||| ||||   | |||||| |||||||||||| | ||||||||| ||||    
T  35135251 gataaaaacgagctagaagagcgattttaggtcaaaaattgactctaaatcactcctc 35135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 46918548 - 46918397
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||||||| |||||| ||| || |||| ||   |||||||||||||||||||||||  || ||||| |||||||| |||||||||| |||||||    
T  46918548 cgcacaaagacgacaaacaaaccaatgttgcacaaagatgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcatttatttcaat-aaaggga 46918450  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
    || || ||||||||||| || || |||| |||||||||||||| | ||||||||    
T  46918449 aagag-aaaacgagttaaaggggcgattatgggtcaaaaattgactctaaatca 46918397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 19895655 - 19895735
Alignment:
Q  50 cgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttaga 130  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  19895655 cgacgaaatcacaaaataaaaaacaaaatagatgcgaaaatcacttatttcaataaaagggaaaaggaaaaatgagttaga 19895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 22751586 - 22751445
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||| |||||||||||||||| |||||| |||| |   |||| |||| ||||||||||||||| |||  ||  ||||||||||||||| |||||||||||    
T  22751586 cgcataaagacgacgaacaaaccaacgt-gcactacgacgacaaaattacaaaataaaaaacgaaactaatatgaaaatcacttattttaataaaaggga 22751488  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    ||||| |||||||||||||  |||||||||   ||||||||||    
T  22751487 aatagtaaaacgagttagaagggtgattttatctcaaaaattg 22751445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 14734011 - 14734172
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||||||||| ||  ||||||||||||||||  |||| |  |   || | ||||||||||||||| |||| ||    
T  14734011 acgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgacgaaatcacaaaaggaaaacctaattcgacgtgaaaatcacttatttaaatagaa 14734110  T
Q  108 gggaaata-gaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    |||||  | ||||||||  |||||| |||||||| ||||||||||||| ||||||| |||||    
T  14734111 gggaatgaggaaaaacgttttagaggggtgatttggggtcaaaaattgaccctaaaccaccc 14734172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 11001995 - 11001875
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||| |||||||||||||||||||  ||||||| ||||||  ||||||||||||||||||||| |   || ||||| |||||| |||||||||| |||||    
T  11001995 acgttgcacaaagacgacgaacaac-caacgtctcacgaagacgacgaaatcacaaaataaaacaa--aatagatgtgaaaattacttatttcattaaaa 11001899  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
    | ||||||||||||||||| ||||    
T  11001898 gcgaaatagaaaaacgagtaagag 11001875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 23177549 - 23177686
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||| ||| ||| ||||||| ||  ||  ||||||||||||| |||| || || ||||| ||||||||||||||||||| ||||| |    
T  23177549 cgcacaaagacgacgaaaaaaccaaggtcgcactaagacggagaaatcacaaaatgaaaa-cgaaatagatgtgaaaatcacttatttcaat-aaaggaa 23177646  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaa 151  Q
    || |||||||| ||||||||  |||||||||||| |||||    
T  23177647 aagagaaaaactagttagaggagtgattttgggtaaaaaa 23177686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 21552417 - 21552571
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| || ||||||||| ||| || ||||||||||| ||  |||||||||||| ||| ||||| |  | | |||| |||||||| |||||| |||||||    
T  21552417 acgtcacataaagacgacaaacgaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaacctaatccgatgtgaaaatcatttatttaaataaaa 21552516  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaa 162  Q
    | |||  |||||||||| ||||||||||||||| || |||||||||  |||||||    
T  21552517 gagaaggagaaaaacgatttagagaggtgatttgggttcaaaaattaaccctaaa 21552571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 15123988 - 15124076
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaac-gagttagagaggtgatttt 141  Q
    ||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||| | ||||||  |||||||| |||||||||    
T  15123988 gaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaagataaaaacttagttagaggggtgatttt 15124076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 21329301 - 21329420
Alignment:
Q  51 gacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaa 150  Q
    ||||||||||||||| ||||| |  |   |||| ||||||||||||||| |||| |||||||  || ||||||| |||||| ||||| ||||||||||||    
T  21329301 gacgaaatcacaaaagaaaaacctaattcgatgtgaaaatcacttatttaaatagaagggaatgaggaaaacgatttagaggggtga-tttgggtcaaaa 21329399  T
Q  151 attgtccctaaatcacccctc 171  Q
    |||| ||||||| ||||||||    
T  21329400 attgaccctaaaccacccctc 21329420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 772592 - 772497
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaa 106  Q
    |||||||||||||||  ||||| ||||||||||| ||  |||||||||||| ||| |||||||  || ||| ||||||||||||||| ||||||||    
T  772592 tcgcacaaagacgacagacaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaaactaaatagaagcgaaaatcacttatatcaataaa 772497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 41748487 - 41748621
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatag--aaaaacgagttagag 131  Q
    ||||||||||| ||  || ||||||||| |||  ||||||| || ||||| ||||||||| ||||| ||||||||| ||||||  |||||| | ||||||    
T  41748487 caacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacctattttaataaaaggaaaatagaaaaaaacaatttagag 41748586  T
Q  132 aggtgattttgggtcaaaaattgtccctaaatcac 166  Q
      |||||||||| |||||||||| || ||||||||    
T  41748587 gagtgattttggatcaaaaattgaccgtaaatcac 41748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 14707731 - 14707618
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaat-aaaaggg 110  Q
    |||||||| ||||| |||||| ||||| | ||| ||   |||||||||||||||||||||| | || |||||  ||| ||| |||||||||| |||||||    
T  14707731 cgcacaaaaacgactaacaaaccaacgccacactaagatgacgaaatcacaaaataaaaaatgaaatagatgttaaattcaattatttcaataaaaaggg 14707632  T
Q  111 aaatagaaaaacga 124  Q
    ||| | ||||||||    
T  14707631 aaagaaaaaaacga 14707618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 43098727 - 43098577
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||| ||||| || ||||||| ||||| ||||| ||  |||||||||||| ||  |||| ||  || ||||| |||| |||||||||| ||| ||||     
T  43098727 gtcgcataaagatgaagaacaaaacaacgccgcactaagacgacgaaatcacgaa--aaaatactaaatagatgtgaaattcacttatttaaatgaaagt 43098630  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaa 162  Q
    |||  |||||||| | || |||||||||| | |||| ||||||| ||||||||    
T  43098629 gaaggagaaaaacaatttggagaggtgatctagggttaaaaattatccctaaa 43098577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 32312714 - 32312618
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||||||| |||||| |||| ||  ||| |||||||||||| ||||| |  || | ||   |||||||||||||| |||||||||    
T  32312714 gcacaaagacgacgaacaaaacaacgttgcactaagacgaagaaatcacaaaagaaaaacctaaatatatttaaaaatcacttatttaaataaaagg 32312618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 24045287 - 24045353
Alignment:
Q  100 caataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||||||||| ||| ||||||| | ||||||  |||||||||||||||||||||| || |||||||||    
T  24045287 caataaaagg-aaagagaaaaatgtgttagacgggtgattttgggtcaaaaattgaccttaaatcacc 24045353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 8e-67; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 44562713 - 44562878
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  44562713 gtcgcacaaagacgacgaacaaaccaacgtcgcacgaagatgacgaaatcacaaaatataaaacgtaacagatgtgaaaatcacttatttcaataaaagg 44562812  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccgac 175  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  44562813 gaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccatccgac 44562878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 23320592 - 23320448
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  23320592 acgtcgcacaaagacgacgaacaaaccaacgtcacacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatgacttatttcaataaaa 23320493  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaat 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  23320492 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaat 23320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 5832386 - 5832222
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa-cgtaacagatgcgaaaatcacttatttcaataaa 106  Q
    |||||||||||| |||||||||||| |||||||||| |||  ||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||    
T  5832386 acgtcgcacaaatacgacgaacaaaccaacgtcgcaagaagacgacgaaatcacaaaataaaaaaacgaaatagatgtgaaaatcacttatttcaataaa 5832287  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  5832286 agggaaatagaaaaacgagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctc 5832222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 630746 - 630909
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa-cgtaacagatgcgaaaatcacttatttcaataaa 106  Q
    ||||||||||||||||||||||||| |||||||||| |||  ||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||    
T  630746 acgtcgcacaaagacgacgaacaaaccaacgtcgcaagaagacgacgaaatcacaaaataaaaaaacgaaatagatgtgaaaatcacttatttcaataaa 630845  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||    
T  630846 agggaaatagaaaaacgagttagatgggtgatttagggtcaaaaattgaccctaaatcacccct 630909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 22344874 - 22345037
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  22344874 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 22344973  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||    
T  22344974 gggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaattgaacctaaatcacccctc 22345037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 21326625 - 21326461
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||| ||||||  ||||||||||  ||||||||||||| |||||||| |||||||||||||||||||||||    
T  21326625 acgtcgcacaaagacgacgaacaaaccaatgtcacacgaagacgacgaaatcgtaaaataaaaaacgcaacagatgtgaaaatcacttatttcaataaaa 21326526  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctcc 172  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||  ||||||||||||||||    
T  21326525 gggaaatagaaaaacgagttagaggggtgatttttgttcaaaaattgatcctaaatcacccctcc 21326461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 15276415 - 15276553
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||    
T  15276415 tcgcacaaagacgacgaacaaaccaacgtcgcacgaaaacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaaggg 15276514  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaa 149  Q
    ||| |||||||||||| |||  |||||||||||||||||    
T  15276515 aaagagaaaaacgagtgagatgggtgattttgggtcaaa 15276553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 38646736 - 38646573
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||| | || |||||  ||||||||||||||||||||||    
T  38646736 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacaaaatcacaaaataaaaaatgaaatagatgttaaaatcacttatttcaataaaa 38646637  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |  ||| |||||||||||||| |  |||||||||||||||||||||| || |||||||| ||||    
T  38646636 gaaaaagagaaaaacgagttacatgggtgattttgggtcaaaaattgaccataaatcactcctc 38646573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 32539152 - 32539311
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| |||||||| || ||  |||| |||||||||||||||||||  || |||||||||||||||||||||||||||||    
T  32539152 acgtcgcacaaagacgacgaacaaaccaacgtcgtactaagacgacaaaatcacaaaataaaaaacaaaatagatgcgaaaatcacttatttcaataaaa 32539251  T
Q  108 gggaaatagaaaaacgagttagag-aggtgattttgggtcaaaaattgtccctaaatcac 166  Q
      |||| ||||||| ||||||| | |||||||||||||||||||||| ||| ||||||||    
T  32539252 atgaaagagaaaaatgagttagtgaaggtgattttgggtcaaaaattatccttaaatcac 32539311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 4564668 - 4564535
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  4564668 acgtcgcacaaagacgactaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 4564571  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgg 143  Q
    | |||||||||||||||||||||| |||||||||||    
T  4564570 gagaaatagaaaaacgagttagaggggtgattttgg 4564535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 45659168 - 45659041
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    ||||||||||| ||  ||||||||||||||||||||||| | || ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||      
T  45659168 caacgtcgcacaaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaaggtaaagagaaaaacgagttagagca 45659069  T
Q  134 gtgattttgggtcaaaaattgtccctaa 161  Q
    ||||||||||||||||||||| ||||||    
T  45659068 gtgattttgggtcaaaaattgaccctaa 45659041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 23257240 - 23257108
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||| |||||||||  || | ||| |||||||||||||||||||||||    
T  23257240 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaa 23257141  T
Q  108 gggaaatagaaaaacgagttagagaggtgattt 140  Q
    ||||||  ||||||||||| |||| ||||||||    
T  23257140 gggaaagggaaaaacgagtgagaggggtgattt 23257108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 52752175 - 52752036
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| |||| |||||  |||| |||||||||||||||||||  || ||||| |||     |||||||||||||||    
T  52752175 acgtcgcacaaagacgacgaacaaaccaatgtcgtacgaagacgacaaaatcacaaaataaaaaacaaaatagatgtgaa-----cttatttcaataaaa 52752081  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaat 152  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  52752080 gggaaaaagaaaaacgagttagagaggtgattttggatcaaaaat 52752036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 1768115 - 1767986
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||  ||||||| ||||||  ||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||    
T  1768115 gtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcaataaaagg 1768017  T
Q  110 gaaatagaaaaacgagttagagaggtgattt 140  Q
    |||| |||||||||| ||||||  |||||||    
T  1768016 gaaagagaaaaacgaattagaggagtgattt 1767986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 14717230 - 14717367
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaa-taaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagaga 132  Q
    ||||||||||| ||  |||||||||||||||| ||||||||  || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||     
T  14717230 caacgtcgcacaaagacgacgaaatcacaaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagggaaaaagaaaaacgagttagag- 14717328  T
Q  133 ggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||| |||  ||||||||||| ||||||||||||||||    
T  14717329 ggtgaatttaagtcaaaaattgaccctaaatcacccctc 14717367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 6212890 - 6213011
Alignment:
Q  50 cgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaa 149  Q
    |||||||||| |||||||||||||   | ||||| |||||||||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||    
T  6212890 cgacgaaatcccaaaataaaaaacaagatagatgtgaaaatcacttatttcaataaaagggaaaaggaaaaacgagttagaggtgtgattttgggtcaaa 6212989  T
Q  150 aattgtccctaaatcacccctc 171  Q
    ||||| || |||||||||||||    
T  6212990 aattgaccataaatcacccctc 6213011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 40488359 - 40488491
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||||||||| ||  |||||||||||||||| |||||||| || ||||| |||||||  ||||||||||||||    
T  40488359 acgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaacgaaatagatgtgaaaatcgtttatttcaataaaa 40488458  T
Q  108 gggaaatagaaaaacgagttagagaggtgattt 140  Q
    |||||| |||||||  |||||||| ||||||||    
T  40488459 gggaaagagaaaaataagttagaggggtgattt 40488491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 10877492 - 10877338
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||| ||||||||| ||||||||||| ||   ||||||||||| ||| |||||||| || ||||  ||||||||||| |||||||||||||||||    
T  10877492 cacaaagacaacgaacaaaacaacgtcgcactaagatgacgaaatcacgaaagaaaaaacgaaatagatatgaaaatcacttttttcaataaaagggaaa 10877393  T
Q  114 tagaaaaacgagttagagaggtgattttgggt-caaaaattgtccctaaatcacc 167  Q
     |||||||||||||||||  ||||||||||||  |||||||| || |||||||||    
T  10877392 gagaaaaacgagttagaggtgtgattttgggtaaaaaaattgaccataaatcacc 10877338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 15698351 - 15698230
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||| ||||||||| ||||||  ||||||| ||| ||  ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  15698351 acgtcgcccaaagacgatgaacaac-caacgtcacacaaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 15698253  T
Q  108 gggaaatagaaaaacgagttaga 130  Q
    |||||| ||||||||||||||||    
T  15698252 gggaaagagaaaaacgagttaga 15698230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 35077872 - 35077994
Alignment:
Q  28 acaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagtt 127  Q
    ||||| |||||||| || ||  |||||||||||| ||| |||||||| || ||||| |||||||||||||||||||||||  |||| |||||||||||||    
T  35077872 acaaaacaacgtcgtactaagacgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaaatgaaagagaaaaacgagtt 35077971  T
Q  128 agagaggtgattttgggtcaaaa 150  Q
    |||||||||||||||||||||||    
T  35077972 agagaggtgattttgggtcaaaa 35077994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 44513971 - 44514115
Alignment:
Q  28 acaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaa-cgagt 126  Q
    ||||| ||| ||||||| ||  ||||||| |||||||| || ||||  ||  |||| | ||||||||||||||||||||||||||||||||||| | |||    
T  44513971 acaaaacaaggtcgcactaagacgacgaattcacaaaaaaagaaacaaaatggatgtgtaaatcacttatttcaataaaagggaaatagaaaaaacaagt 44514070  T
Q  127 tagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || ||||||||||||||||||||||||| ||||||||||||||||    
T  44514071 taaagaggtgattttgggtcaaaaattgaccctaaatcacccctc 44514115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 8893439 - 8893300
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    |||||||||||||| |||  ||| |||| || ||  ||| |||||||| ||| |||| ||| || ||||| |||||||||||||||||||||||||||||    
T  8893439 cacaaagacgacgagcaacacaatgtcgtactaagacgatgaaatcacgaaagaaaagacgaaatagatgtgaaaatcacttatttcaataaaagggaaa 8893340  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaatt 153  Q
     ||||||||||||||||  |||||||||||||||||||||    
T  8893339 gagaaaaacgagttagaagggtgattttgggtcaaaaatt 8893300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 33703472 - 33703634
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||| || || ||  |||||||||||| ||| ||||| || || ||||| |||||||||||||||||||||||    
T  33703472 acgtcgcacaaagacgacaaacaaaacaacgccgtactaagacgacgaaatcacgaaagaaaaa-cgaaatagatgtgaaaatcacttatttcaataaaa 33703570  T
Q  108 gggaaatagaaaaacgagttaga-gaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||| |||||||||  || | ||||||||||||| |||||||| || ||||||| |||||    
T  33703571 gggaaatag-aaaacgagtgtgagggggtgattttgggtaaaaaattgaccataaatcatccctc 33703634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 40992462 - 40992351
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttattt--caataaaagggaaatagaaaaacgagttagag 131  Q
    ||||||||||||||   |||||||||||||||||||||||| || | ||| |||||||||||||||  |||||||||||||| |||||||||||||||||    
T  40992462 caacgtcgcacgaagatgacgaaatcacaaaataaaaaacgaaataaatgtgaaaatcacttatttttcaataaaagggaaagagaaaaacgagttagag 40992363  T
Q  132 aggtgattttgg 143  Q
     |||||||||||    
T  40992362 gggtgattttgg 40992351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 52839682 - 52839510
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| |||||||| |||||||||| ||||||||||| ||  |||| ||||||| ||| |||||||| || | ||| |||||||||||||||||||||||    
T  52839682 acgtctcacaaagatgacgaacaaaacaacgtcgcactaagacgacaaaatcacgaaagaaaaaacgaaataaatgtgaaaatcacttatttcaataaaa 52839583  T
Q  108 gggaaatag---------aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||| |||         ||||||||||||||  ||||||||||||||||||||||  | |||||||||||||    
T  52839582 gggaattagaaagaagaaaaaaacgagttagaagggtgattttgggtcaaaaattgatcataaatcacccctc 52839510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 12148015 - 12148169
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    ||||||| || ||||||||| ||| ||| ||| ||  ||||| |||||| ||| |||||||  || ||||| ||||||||||||||| ||||||| ||||    
T  12148015 gcacaaaaacaacgaacaaaacaaagtcacactaagacgacggaatcacgaaagaaaaaacaaaatagatgtgaaaatcacttatttgaataaaaaggaa 12148114  T
Q  113 atagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    ||||||||||||||||||| |||  |||||||||||||| || | ||||||||||    
T  12148115 atagaaaaacgagttagagtggtatttttgggtcaaaaactgacgctaaatcacc 12148169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 36621502 - 36621391
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||| |||||| ||||| ||||||||  |||| ||||||||||| |||||||| || ||||| |||| |||||||||||||||||||     
T  36621502 gtcgcacaaagacgacaaacaaaccaacgccgcacgaagacgacaaaatcacaaaacaaaaaacgaaatagatgtgaaagtcacttatttcaataaaaga 36621403  T
Q  110 gaaatagaaaaa 121  Q
    |||| |||||||    
T  36621402 gaaagagaaaaa 36621391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 49651996 - 49651841
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa---------cgtaacagatgcgaaaatcacttatt 98  Q
    |||||| ||||||||||||||||||  |||||| ||||||  |||||||||||||||||||||||         || || ||||| |||| ||| |||||    
T  49651996 acgtcgtacaaagacgacgaacaaacgaacgtcacacgaagacgacgaaatcacaaaataaaaaataaaaaaaacgaaatagatgtgaaattcatttatt 49651897  T
Q  99 tcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    ||||||||| ||||||||||||||||||||||   |||||||||| ||||||||||    
T  49651896 tcaataaaaaggaaatagaaaaacgagttagatgtgtgattttggatcaaaaattg 49651841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 27469670 - 27469793
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaat-aaa 106  Q
    ||||||||||||||||| ||||||| ||||||||||| ||  |||||||||||||||| |||||||| || ||||| |||||| |||||||| ||| |||    
T  27469670 acgtcgcacaaagacgatgaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaacgaaatagatgtgaaaataacttattttaataaaa 27469769  T
Q  107 agggaaatagaaaaacgagttagag 131  Q
    | | |||||| ||||||||||||||    
T  27469770 aagtaaatag-aaaacgagttagag 27469793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 33177559 - 33177722
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||| ||||||||||| |||||||  ||||||||||| ||  | | |||||||| ||| |||||||| ||  |||| |||||||||||||||||||||||    
T  33177559 acgttgcacaaagacggcgaacaacacaacgtcgcactaagacaatgaaatcacgaaagaaaaaacgaaatggatgtgaaaatcacttatttcaataaaa 33177658  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctcc 172  Q
     ||||| | ||||| ||||||||  | |||||||| ||||||||||  || ||||||||||||||    
T  33177659 aggaaaga-aaaaaggagttagatggatgattttgagtcaaaaattagccataaatcacccctcc 33177722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 22032062 - 22032215
Alignment:
Q  17 aaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatag 116  Q
    |||||||||||||||| |||| |||||| ||  | | ||||| ||||||||||||||  || ||||| ||||| ||||||||||||||||||| ||| ||    
T  22032062 aaagacgacgaacaaaccaacatcgcactaagacaa-gaaattacaaaataaaaaacaaaagagatgtgaaaaacacttatttcaataaaaggaaaagag 22032160  T
Q  117 aaaaacgagttagagaggtga-ttttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||| | |||||| ||||| ||||||||||||||||| |||||||||| |||||    
T  22032161 -aaaacaatttagaggggtgatttttgggtcaaaaattgaccctaaatcatccctc 22032215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 17579843 - 17579757
Alignment:
Q  85 gaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||| | ||||||||| |||||||||| |||||| |||||||||    
T  17579843 gaaaatcacttatttcaattaaagggaaagagaaaaatgagttagagggatgattttggttcaaaaattgaccctaagtcacccctc 17579757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 38644761 - 38644871
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||| ||| ||||||||||  ||| ||||||||||||||||||||| ||   ||  |||||||||||||||||| |||||     
T  38644761 gtcgcacaaagacgacgaacaaaccaatgtcgcacgaagacgaagaaatcacaaaataaaaaacggaatttatttgaaaatcacttatttcaaaaaaaga 38644860  T
Q  110 gaaatagaaaa 120  Q
    |||| ||||||    
T  38644861 gaaaaagaaaa 38644871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 29067196 - 29067080
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    |||||||||||||||||||| ||||||||||| ||   || |||||||||||  ||| || | || ||||| || |||||||||||||||||||||||||    
T  29067196 gcacaaagacgacgaacaaaacaacgtcgcactaagaagatgaaatcacaaagaaaagaa-gaaatagatgtgagaatcacttatttcaataaaagggaa 29067098  T
Q  113 atagaaaaacgagttaga 130  Q
    | ||||||||||||||||    
T  29067097 agagaaaaacgagttaga 29067080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 900232 - 900134
Alignment:
Q  50 cgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaat-aaaagggaaatagaaaaacgagttagagaggtgattttgggtcaa 148  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||||| | ||||| |||||| || |||||||| |||||||    
T  900232 cgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaaagggaaaga-aaaaatgagttacaggggtgatttagggtcaa 900134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 14 - 169
Target Start/End: Original strand, 13691726 - 13691881
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    |||||||||||| ||||||  | |||||||| ||   ||||||||||||||| | ||| |  |   |||| ||||||||||||||| |||| ||| |||     
T  13691726 cacaaagacgacaaacaaaatagcgtcgcactaagatgacgaaatcacaaaagagaaacctaattcgatgtgaaaatcacttatttaaatagaagtgaag 13691825  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccc 169  Q
     |||||||||| |||||| |||||||||||||||||||||| ||||||| ||||||    
T  13691826 gagaaaaacgatttagaggggtgattttgggtcaaaaattgaccctaaaccacccc 13691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 48655100 - 48655190
Alignment:
Q  80 gatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    |||| |||| |||||||||||||||||||||||| | ||||| |||||  ||| ||||||||||||||||||||| | |||||||||||||    
T  48655100 gatgtgaaattcacttatttcaataaaagggaaagataaaaatgagttgcagatgtgattttgggtcaaaaattgactctaaatcacccct 48655190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 28213198 - 28213063
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||||||||||  |||| ||||| ||  |||| |||||||||||||||||||| || ||||| | ||||||||||||   || |||||    
T  28213198 gtcgcacaaagacgacgaacaaactaacgccgcacaaagacgacaaaatcacaaaataaaaaacgaaatagatgtg-aaatcacttatt--cattaaagg 28213102  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaa 148  Q
     ||| |||||||||||||||   ||||||||||| ||||    
T  28213101 aaaagagaaaaacgagttagtagggtgattttggatcaa 28213063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 34659596 - 34659735
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||||| |||||||| || ||  | || ||||||| ||| |||||||  || ||| |  |||||||| | |||||||||||||||    
T  34659596 cgcacaaagacgacgaacaaa-caacgtcgtactaagacaacaaaatcacgaaagaaaaaacaaaatagacgtaaaaatcacctgtttcaataaaaggga 34659694  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaat 152  Q
    || ||||||||  ||| ||| |||||||| |||||||||||    
T  34659695 aagagaaaaacaggttcgaggggtgatttcgggtcaaaaat 34659735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 79 - 171
Target Start/End: Complemental strand, 46589255 - 46589165
Alignment:
Q  79 agatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||| ||||||||||||||| |||||||| ||||||  |||||||||||||| |||||||||| |||||||||||  | |||||||||||||    
T  46589255 agatgtgaaaatcacttattttaataaaagagaaata-taaaacgagttagag-ggtgattttgagtcaaaaattgatcataaatcacccctc 46589165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 37685111 - 37685204
Alignment:
Q  62 aaaataaaaaacgtaacagatgcgaaaatcacttatttcaat--aaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    |||| |||||||| ||||| || |||||||||||||||||||  |||| |||||||| ||||||||||||||   ||||||||||||||||||||    
T  37685111 aaaaaaaaaaacgaaacaggtgtgaaaatcacttatttcaataaaaaaaggaaatag-aaaacgagttagaggattgattttgggtcaaaaattg 37685204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 37700407 - 37700314
Alignment:
Q  62 aaaataaaaaacgtaacagatgcgaaaatcacttatttcaat--aaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    |||| |||||||| ||||| || |||||||||||||||||||  |||| |||||||| ||||||||||||||   ||||||||||||||||||||    
T  37700407 aaaaaaaaaaacgaaacaggtgtgaaaatcacttatttcaataaaaaaaggaaatag-aaaacgagttagaggattgattttgggtcaaaaattg 37700314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 52839466 - 52839412
Alignment:
Q  117 aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  52839466 aaaaacgagttagaagggtgattttgggtcaaaaattgaccctaaatcacccctc 52839412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 2350774 - 2350611
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||| ||||||| |||||| ||||||||||| ||  |||| |||||||||||  |||| |  |   |||| ||||||||||||||| |||||||    
T  2350774 acgtcgcacagagacgaccaacaaaacaacgtcgcactaagacgactaaatcacaaaaggaaaatctaatttgatgtgaaaatcacttatttaaataaaa 2350675  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||  ||||||| || || ||| | ||| || |||| |||||||| ||||| | ||||||||    
T  2350674 tggaagaagaaaaatgacttggagggatgaattggggttaaaaattgaccctacaccacccctc 2350611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 30853755 - 30853908
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||| |||| ||||||| ||||||||||| ||  ||||||||| | |||| |||| |       |||| |||||||| |||||||||| |||||||    
T  30853755 cgcacaaacacgatgaacaaaccaacgtcgcactaaggcgacgaaataaaaaaacaaaata-------gatgtgaaaatcatttatttcaatgaaaggga 30853847  T
Q  112 aatagaaaaacgagttagagagg-tgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || ||||||| || |||| | || |||||||||||||||||||| || | |||||| ||||    
T  30853848 aagagaaaaatgacttagtgggggtgattttgggtcaaaaattgaccttgaatcacacctc 30853908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 12967696 - 12967757
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaa 71  Q
    ||||||||||||||||||||||| |||||||||||||    |||| ||||||||||||||||    
T  12967696 gtcgcacaaagacgacgaacaaaccaacgtcgcacgatgatgacggaatcacaaaataaaaa 12967757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 34566840 - 34566736
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||  ||||||| ||  ||||||||||||||||  |||| |  |   |||| ||||||||||||||| |||||||    
T  34566840 acgtcgcacaaagacgacaaacaaaacagggtcgcactaagacgacgaaatcacaaaaggaaaacctaattcgatgtgaaaatcacttatttaaataaaa 34566741  T
Q  108 gggaa 112  Q
    |||||    
T  34566740 gggaa 34566736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 35356519 - 35356577
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaa 71  Q
    ||||||||||||||||||||||||||| |||| ||| | || ||||||||||| |||||    
T  35356519 gcacaaagacgacgaacaaatcaacgttgcactaaaacaacaaaatcacaaaagaaaaa 35356577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 13969609 - 13969705
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaag 108  Q
    |||||||||||||||||||   ||||||||||| ||  ||| |||||||  ||  |||||||| || ||||| ||| ||| ||||||||||||||||    
T  13969609 cgcacaaagacgacgaacatcacaacgtcgcactaagacgatgaaatcatgaagaaaaaaacgaaatagatgtgaagatcgcttatttcaataaaag 13969705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 26199732 - 26199673
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaata 67  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  ||| ||||||| ||||||    
T  26199732 acgtcgcacaaagacgacgaacaaaacaatgtcgcactaagacgatgaaatcaaaaaata 26199673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 1e-65; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 19759940 - 19759773
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||| ||||||| ||||||||| ||||   ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  19759940 acgtcgcacaaagacgatgaacaaaccaacgtcgctcgaagatgacgaaatcacaaaataaaaaacgtaacaaatgtgaaaatcacttatttcaataaaa 19759841  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccgac 175  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  19759840 gggaaatagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctccgac 19759773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 13234070 - 13234232
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  13234070 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 13234169  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| |||||||||| ||||| |||||||||| |||||||||||| ||||||||||||||||    
T  13234170 gggaaaaagaaaaacgaattaga-aggtgattttaggtcaaaaattgaccctaaatcacccctc 13234232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 20845159 - 20845014
Alignment:
Q  9 cgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaag 108  Q
    |||||||||||||||||||||||| ||| ||||||||||   ||| |||||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  20845159 cgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagatgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaag 20845060  T
Q  109 ggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  20845059 ggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattg 20845014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 32457796 - 32457635
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| | || | ||| |||| ||||||||||||||||||      
T  32457796 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaagacgacgaaatcacaaaataaaaaatgaaatacatgtgaaagtcacttatttcaataaaaat 32457697  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| ||||||||||||||||  |||||||||||||||||||||| | ||||||||||||||    
T  32457696 gaaagagaaaaacgagttagatgggtgattttgggtcaaaaattgacgctaaatcacccctc 32457635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 23843386 - 23843509
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  23843386 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaaaagatgtgaaaatcacttattttaataaaa 23843485  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
    ||||||||||||||||||||||||    
T  23843486 gggaaatagaaaaacgagttagag 23843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 16913479 - 16913317
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||| ||||| ||||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||    
T  16913479 acgtcgcacaaggacgatgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaatgaaa 16913381  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    | ||||  |||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  16913380 gtgaaagtgaaaaacgagttagaggggtgatttcgggtcaaaaattgaccctaaatcacccctc 16913317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 12576443 - 12576603
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||| ||| ||  ||||| |||||||||||||||  || || ||||| ||||||||||||||||||| |||    
T  12576443 acgtcgcacaaagacgacgaacaac-caacgtcacacaaagacgacggaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaattaaa 12576539  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||    
T  12576540 gggaaatagaaaaacaagttagaggggtgatttagggtcaaaaattgaccctaaatcacccctc 12576603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 548838 - 548990
Alignment:
Q  18 aagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaataga 117  Q
    ||||||||||||||| |||| | |||||||  ||| |||||||||||||||||| |  || ||||| ||||||| ||||||||||||||||||||| |||    
T  548838 aagacgacgaacaaaccaacattgcacgaagacgatgaaatcacaaaataaaaa-caaaatagatgtgaaaatcgcttatttcaataaaagggaaaaaga 548936  T
Q  118 aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||| |||||||||||||||||||||| || || ||||| ||||    
T  548937 aaaacgagttagaggggtgattttgggtcaaaaattgaccttatatcactcctc 548990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 15128119 - 15128257
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||| ||||||| ||     | |||||||||||||||||||| ||||||    
T  15128119 cgcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcacaaaattaaaaacgaaag----gtgaaaatcacttatttcaatacaaggga 15128214  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    || ||||||||||||||||| |||||||||||| |||||||||    
T  15128215 aagagaaaaacgagttagaggggtgattttgggacaaaaattg 15128257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 32804440 - 32804286
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaat 114  Q
    |||||||||| ||||||| |||| || ||| ||  ||| ||||||||||||||||||||  || ||||| |||||||||||||||||||||||||| ||     
T  32804440 acaaagacgaggaacaaaccaacatctcactaagacgatgaaatcacaaaataaaaaacaaaaaagatgtgaaaatcacttatttcaataaaagggtaag 32804341  T
Q  115 ag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    || ||||| ||||||||  |||||||||||||||||||||| |||||||||||||    
T  32804340 agaaaaaatgagttagatgggtgattttgggtcaaaaattgaccctaaatcaccc 32804286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 4663784 - 4663945
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||| ||||||||||  |||||||||| ||  |||||||||||||||  ||| |||| || || || ||||||||||||||| ||||||||     
T  4663784 gtcgcacaaagatgacgaacaaaataacgtcgcactaagacgacgaaatcacaaagaaaacaacgaaatagttgtgaaaatcacttattttaataaaaga 4663883  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| | ||||||| ||||||| |||||||||||||||||||||| |||  |||||||||||    
T  4663884 gaaacataaaaacgtgttagaggggtgattttgggtcaaaaattgacccacaatcacccctc 4663945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 8633154 - 8633273
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||| |   || ||||| |||||||||||||||||||||||    
T  8633154 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaaaacgacgaaatcacaaaataaaacaa--aatagatgtgaaaatcacttatttcaataaaa 8633250  T
Q  108 gggaaatagaaaaacgagttaga 130  Q
    || ||||| ||||||||||||||    
T  8633251 ggaaaatacaaaaacgagttaga 8633273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 33194744 - 33194598
Alignment:
Q  21 acgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaa 120  Q
    |||||||||||| |||| || ||| ||  ||||||||||||||||||||||||  || ||||| |||||| | |||||||||||||  ||||| ||||||    
T  33194744 acgacgaacaaaccaacatcacactaacacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaataatttatttcaataaagaggaaagagaaaa 33194645  T
Q  121 acgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  33194644 acgaattagagatgtgattttggatcaaaaattgaccctaaatcacc 33194598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 12 - 168
Target Start/End: Complemental strand, 8644393 - 8644237
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||||||| ||||   ||| ||||||| ||   ||| ||||||||||| |||||||| || ||||| ||||| |||||||||||||||||||||    
T  8644393 cgcacaaagacgaccaacagcacaatgtcgcactaagatgacaaaatcacaaaagaaaaaacgaaatagatgtgaaaaacacttatttcaataaaaggga 8644294  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    || ||||||| || || ||| ||||||||| |||||||||||| |||||||||||||    
T  8644293 aagagaaaaatgaatttgagtggtgatttttggtcaaaaattgaccctaaatcaccc 8644237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 10744735 - 10744571
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaa---acgtaacagatgcgaaaatcacttatttcaata 104  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  |||||||||||||||| |||||   ||  || ||||| | ||| ||||||||||||||    
T  10744735 acgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaaaaagaaacaaaatagatgtgtaaaccacttatttcaata 10744636  T
Q  105 aaagggaaatagaaaaa-cgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||| | ||||||||||| | ||||||||  ||||||||||||||||| ||| |||||||||||||    
T  10744635 aaaagaaaatagaaaaaacaagttagaggagtgattttgggtcaaaagttgaccctaaatcaccc 10744571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 31748109 - 31747955
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| || ||| ||| ||||||||||  || |||||||||||||||||||||| || ||||| |||| | |||||||||||| |||    
T  31748109 acgtcgcacaaagacgacaaagaaaccaatgtcgcacgaagacgtcgaaatcacaaaataaaaaacgaaatagatgtgaaagt-acttatttcaattaaa 31748011  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
     ||||| ||||||||||||||||| |||   ||| |||||||||||| ||||||||||    
T  31748010 aggaaagagaaaaacgagttagaggggt--cttttggtcaaaaattgaccctaaatca 31747955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 7049397 - 7049236
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| ||||||||||| ||  ||| ||||||||||||||   ||| ||||||||||| |||||||  || ||||  |||||||||||||||||||||||    
T  7049397 acgtctcacaaagacgatgacgaaaccaacgtcgcacgaagatgacaaaatcacaaaacaaaaaaca-aatagatatgaaaatcacttatttcaataaaa 7049299  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| ||||||| ||| | ||| |||||||||| ||||||| ||| ||||||||||||||||    
T  7049298 gggaaagagaaaaatgagct-gaggggtgattttgagtcaaaagttgaccctaaatcacccctc 7049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 11426093 - 11425973
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  |||| |||||||||   ||||||||||||||||||||  || || ||||| ||||||||||||||| |||||||    
T  11426093 acgtcgcacaaagacgacgaacaac-caacatcgcacgaagatgacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttaaataaaa 11425997  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
    | ||||||||||||||||| ||||    
T  11425996 gagaaatagaaaaacgagtaagag 11425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 1944244 - 1944114
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||  ||||| |||||| | ||  |  |||| |||||||||||||||||||  || | |||| |||||||||||||||||||| |||||    
T  1944244 cgcacaaagacgacagacaaaccaacgttgtacttagacgacaaaatcacaaaataaaaaacaaaataaatgcaaaaatcacttatttcaataagaggga 1944145  T
Q  112 aatagaaaaacgagttagagaggtgattttg 142  Q
    || ||||||||||||||||| ||||||||||    
T  1944144 aagagaaaaacgagttagaggggtgattttg 1944114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 891694 - 891581
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaatt 153  Q
    ||||||||||||||||||||| || ||| | |||||||| |||||||||||||| | ||| |||||||||||||| || ||| ||||||||||||||||     
T  891694 gaaatcacaaaataaaaaacgaaatagacgtgaaaatcatttatttcaataaaatgaaaacagaaaaacgagttataggggtaattttgggtcaaaaatc 891595  T
Q  154 gtccctaaatcacc 167  Q
    | |||| |||||||    
T  891594 gacccttaatcacc 891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 20745052 - 20745146
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaa 148  Q
    |||| |||||||||||||||  || ||||| |||||||| ||||||||||||||||||||  |||| || |||| ||||| ||||||||||||||    
T  20745052 gaaagcacaaaataaaaaacaaaatagatgtgaaaatcatttatttcaataaaagggaaaatgaaagacaagttggagagatgattttgggtcaa 20745146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 5417164 - 5417223
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaa 71  Q
    ||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||| ||||    
T  5417164 cgcacaaagacgacgaacaaaccaacgtcgcacaaagacgacgaaatcacaaaatgaaaa 5417223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 5544859 - 5544737
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| |||||||||||||||||||||||| |||||| |   ||| ||||| |||||||| |||||| || | |||  || |||||||||||||||||||    
T  5544859 acgtcacacaaagacgacgaacaaatcaacatcgcactaggacgatgaaataacaaaata-aaaacgaaatatatgtaaatatcacttatttcaataaaa 5544761  T
Q  108 gggaaatag-aaaaacgagttaga 130  Q
    || ||  || ||||||||||||||    
T  5544760 ggaaaggagaaaaaacgagttaga 5544737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 12652233 - 12652324
Alignment:
Q  79 agatgcgaaaatcacttatttcaataaaagggaaatag-aaaaacgagttagagaggtgattttgggtcaaaaa-ttgtccctaaatcaccc 168  Q
    ||||| |||||||||||||||||||||| || ||| || ||||||||||||||||||| | || |||| ||||| ||| |||||||||||||    
T  12652233 agatgtgaaaatcacttatttcaataaatggaaaagagaaaaaacgagttagagaggttaattagggtaaaaaatttgaccctaaatcaccc 12652324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 22530429 - 22530287
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    ||||||||||| || |||||||  |||||| ||| ||  || ||||||||| ||| |||||||  || | ||| ||||||   |||||||||  ||||||    
T  22530429 tcgcacaaagatgatgaacaaaataacgtctcactaagacgtcgaaatcacgaaagaaaaaactaaataaatgtgaaaatttgttatttcaaataaaggg 22530330  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaaaatt 153  Q
    ||| ||||||| |||||| |  |||||||||||||||||||||    
T  22530329 aaagagaaaaaggagttaaatgggtgattttgggtcaaaaatt 22530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 31804358 - 31804301
Alignment:
Q  50 cgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||| ||| |||||||| || ||||| |||||||||||||||||||||||    
T  31804358 cgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 31804301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 33541494 - 33541623
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    ||||||||||||||| |||||| || |||| ||| ||  |||| |||||||||||  |||| |  |   |||| ||||||||||||||| |||| |||||    
T  33541494 tcgcacaaagacgacaaacaaaacagcgtcacactaagacgacaaaatcacaaaaggaaaacctaattcgatgtgaaaatcacttatttaaatagaaggg 33541593  T
Q  111 aaatagaaaaacgagttagagaggtgattt 140  Q
    ||  |||||||||| |||||| ||||||||    
T  33541594 aaggagaaaaacgatttagaggggtgattt 33541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 903563 - 903496
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaa 121  Q
    |||||||||||||||||||   || ||||| |||||| |||||||| || |||||||||| |||||||    
T  903563 gaaatcacaaaataaaaaataaaatagatgtgaaaattacttatttaaacaaaagggaaagagaaaaa 903496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 5e-62; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 8054769 - 8054934
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaa-aacgtaacagatgcgaaaatcacttatttcaataaa 106  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |    
T  8054769 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaaacgtaacagatgtgaaaatcacttatttcaatata 8054868  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctcc 172  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||||||    
T  8054869 agggaaatagaaaaacgagttagagggataattttgggtcaaaaattgaccctaaatcacccctcc 8054934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 9270173 - 9270010
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  9270173 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacaacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 9270074  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||    
T  9270073 gggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgatcataaatcacccctc 9270010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 44295468 - 44295305
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  44295468 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 44295369  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     |||||  ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  44295368 aggaaaaggaaaaacaagttagagagatgattttgggtcaaaaattgaccctaaatcacccctc 44295305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 31874234 - 31874077
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||| |||||| |||| ||  |||| |||||||||||||||||||  || ||||| |||||||||||||||||||||||||    
T  31874234 gtcgcacaaagacgacgaacaaaccaacgttgcacaaagacgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagg 31874135  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    ||||  |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  31874134 gaaaaggaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacc 31874077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 36545743 - 36545906
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||||||||| ||  |||| |||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  36545743 acgtcgcacaaagacgactaacaaaccaacgtcgcacaaagacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 36545842  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| ||||||||||||||||| |||||| |||||||| |||||| || ||||||| |||||    
T  36545843 gggaaagagaaaaacgagttagaggggtgatattgggtcacaaattgaccttaaatcatccctc 36545906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 41996697 - 41996574
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41996697 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaa 41996598  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
    |||||||| |||||||||||||||    
T  41996597 gggaaatacaaaaacgagttagag 41996574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 5989778 - 5989624
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||| | ||||||||||| ||| |||| |||||||||||||||||||| || ||||| |||||||||||||||||  ||||||||    
T  5989778 cgcacaaagacgacgaacataccaacgtcgcactaaaacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcataaaaaggga 5989679  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcac 166  Q
    || |||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  5989678 aagagaaaaacgagttagagatgtgattttgggttaaaaattgaccctaaatcac 5989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 9992813 - 9992656
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaa--taaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||| |  || |||| | || ||||| |||||||||||||||||||||||||||    
T  9992813 cacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaagagatacaaaatgaaatagatgtgaaaatcacttatttcaataaaaggga 9992714  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccc 169  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  9992713 aagagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccc 9992656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 16937303 - 16937464
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||| ||||||| ||| ||||||| ||  |||||||||||||||| || ||||| || ||||| | ||||||||||||| | |||||||    
T  16937303 gtcgcacaaagacgatgaacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttaagtaaaagg 16937402  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||| |||||||| | ||||||||| |||||||||| ||||||||||||||||    
T  16937403 gaaatagaaaaacaagttagagggatgattttggatcaaaaattgaccctaaatcacccctc 16937464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 32256683 - 32256847
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| |||| |||||| ||  || ||||||||| |||  ||||||| || ||||| |||||||||||||||||||||||    
T  32256683 acgtcgcacaaagacgacaaacaaaacaacatcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 32256782  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggt-caaaaattgtccctaaatcacccctc 171  Q
    |||||||| |||||| |||||||| |||||||||||||  |||||||| ||||||||||||||||    
T  32256783 gggaaataaaaaaacaagttagaggggtgattttgggtaaaaaaattgaccctaaatcacccctc 32256847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 16996851 - 16996987
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||| | |||||||||||||||||||||    
T  16996851 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtg-aaatcacttatttcaataaaa 16996948  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtca 147  Q
    || |||||| |||||||||||||| |||||||||||||||    
T  16996949 ggaaaatag-aaaacgagttagaggggtgattttgggtca 16996987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 37659118 - 37658955
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||| |||||||||||||||||| ||| ||||||| ||  | |||||||||||||| || ||||| || ||| | | |||||||||||||||||||||    
T  37659118 acgtcgtacaaagacgacgaacaaaacaaggtcgcactaagacaacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcacttatttcaataaaa 37659019  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||| |||||| | |||||| |||||||||| ||||||||||| ||||||||||||||||    
T  37659018 gggaaatataaaaacaaattagaggggtgattttgtgtcaaaaattgaccctaaatcacccctc 37658955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 3681075 - 3680910
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||  ||||||||||| ||||||| ||||||| ||| |||| |||||||||||||||||||| || ||||| |||||||| ||||||||||||||    
T  3681075 acgtcgcatgaagacgacgaataaatcaatgtcgcactaaaacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcaataaaa 3680976  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggt--caaaaattgtccctaaatcacccctc 171  Q
    || ||| |||||||| ||||||||| ||||||||||||   |||||||| | ||||||||||||||    
T  3680975 ggaaaagagaaaaacaagttagagaagtgattttgggtgaaaaaaattgactctaaatcacccctc 3680910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 32104800 - 32104923
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||| ||||||||| ||| |||||| |||||||| |||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32104800 acgttgcacaaagatgacaaacaaaccaacgtcgtacgaagacgacgaaatcacaaaataaaaaacgtaacagatgtgaaaatcacttatttcaataaaa 32104899  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
      ||||||||||||||| ||||||    
T  32104900 aagaaatagaaaaacgaattagag 32104923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 32412939 - 32412797
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    |||||||||||||| ||||||| ||||||||||||||  |||||||||||||| |||||||||  || | ||| ||||||||||||||||||||||||||    
T  32412939 tcgcacaaagacgatgaacaaaccaacgtcgcacgaagacgacgaaatcacaagataaaaaacaaaataaatgtgaaaatcacttatttcaataaaaggg 32412840  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    |||  | ||||||||| |||| ||||||||||| ||||||||||    
T  32412839 aaa-gggaaaacgagtgagaggggtgattttggatcaaaaattg 32412797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 15665686 - 15665528
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    ||||||||||||| |||||  |||| || ||| ||  |||||||||||  ||| |||||||| || ||||| |||||| ||||||||||||||||| |||    
T  15665686 gcacaaagacgacaaacaacacaacatctcactaagacgacgaaatcatgaaagaaaaaacgaaatagatgtgaaaattacttatttcaataaaagtgaa 15665587  T
Q  113 atagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    | |||||||| |||||||| |||||||||| ||||||| ||| ||||||||||||||||    
T  15665586 agagaaaaacaagttagaggggtgattttgtgtcaaaagttgaccctaaatcacccctc 15665528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 13864493 - 13864348
Alignment:
Q  26 gaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgag 125  Q
    ||||||| ||||||||||| ||  ||||  |||||| ||  |||||||| || ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  13864493 gaacaaaacaacgtcgcactaaggcgacagaatcacgaacgaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaataaaaaaacgag 13864394  T
Q  126 ttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||| | |||||||||||| |||||| ||| || |||||||||||||    
T  13864393 ttacataggtgattttggctcaaaagttgaccttaaatcacccctc 13864348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 7269431 - 7269585
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    ||||||||||||| |||||| ||||||||||| |   |||| |||||||||||||||||||  || ||||| |||||||||||||| |||| ||| ||||    
T  7269431 gcacaaagacgactaacaaaccaacgtcgcactatgacgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttattacaattaaaaggaa 7269530  T
Q  113 atagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    | | |||| |||||||||  |||||||| ||||||||||||| | ||||||||||    
T  7269531 agaaaaaagcgagttagaagggtgatttagggtcaaaaattgactctaaatcacc 7269585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 10042924 - 10042750
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||| ||||| ||||||||| |||||| |||| ||  |||||||||||  ||| |||||||| || ||| | |||||||||||||||||||||||    
T  10042924 acgtcgcactaagacaacgaacaaaacaacgttgcactaagacgacgaaatcatgaaagaaaaaacgaaatagaagtgaaaatcacttatttcaataaaa 10042825  T
Q  108 gggaaatag-----------aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||| |||           ||||||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  10042824 gggaattagaaaaaaaaaaaaaaaacgagttagaggggtgattttgggtcaaaaattgaccataaatcacccctc 10042750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 5917704 - 5917843
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||| ||  |||||||||||| ||| |||||||| || ||||| ||||||||  ||||| ||| |||    
T  5917704 acgtcgcacaaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaaagaaaaaacgaaatagatgtgaaaatca-atattttaattaaa 5917802  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaa 149  Q
    |||||| || |||||||| ||||| |||||||||||||||||    
T  5917803 gggaaagag-aaaacgagctagaggggtgattttgggtcaaa 5917843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 15237604 - 15237756
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||| ||| |||| ||| || ||  ||| ||||| ||||||||||||  | |||| ||| |||||||||||| ||||||||||||||    
T  15237604 cgcacaaagacgacgaagaaaccaacatcgtactaagacgaagaaataacaaaataaaaacag-aacatatgtgaaaatcacttacttcaataaaaggga 15237702  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
    || ||||||||||||||||  |||||||| | || |||||||| ||||||||||    
T  15237703 aagagaaaaacgagttagatgggtgatttagagttaaaaattgaccctaaatca 15237756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 7281094 - 7281232
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    |||||||||||||||||||| ||| ||||||| |   || |||||||||||||||||||||  || ||||| ||||||||||||||||||| ||| | ||    
T  7281094 gcacaaagacgacgaacaaaccaatgtcgcactatgacggcgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaattaaaagaaa 7281193  T
Q  113 atagaaaaacgagttagagaggtgattttgggtcaaaaa 151  Q
    ||| |||| |||||||||  |||||||| |||| |||||    
T  7281194 ataaaaaagcgagttagatgggtgatttagggttaaaaa 7281232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 2629062 - 2628931
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||| |||| |||||  |||||||||| ||| |||||||||||| ||| ||||| |  |  ||||| |||||||||||||||||||||||||    
T  2629062 gtcgcacaaagatgacggacaaaataacgtcgcactaaaacgacgaaatcacgaaagaaaaa-caaagtagatgtgaaaatcacttatttcaataaaagg 2628964  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgg 143  Q
    ||||||| |||||||||||||  |||||||||||    
T  2628963 gaaatag-aaaacgagttagatgggtgattttgg 2628931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 13977547 - 13977390
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaa-taaaagggaaa 113  Q
    |||||||||||||||||| ||| ||||||| |||  ||||||||||  ||| |||||||| || ||||| |||||||||||| | |||  ||||||| ||    
T  13977547 acaaagacgacgaacaaaacaatgtcgcactaaaatgacgaaatcaagaaagaaaaaacgaaatagatgtgaaaatcacttagtccaacaaaaaggggaa 13977448  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||| |||||  ||| ||||||||| |||| ||| || |||||||||||||    
T  13977447 tagaaaaacgaattagatgggtaattttgggtaaaaatttgaccataaatcacccctc 13977390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 11655872 - 11656032
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||| |||| ||||| ||||||| ||||||||||| ||   ||  ||||||||||| |||||| | || ||||| |||||||||||||||| ||||||    
T  11655872 acgtcgtacaaggacgatgaacaaaacaacgtcgcactaagatgataaaatcacaaaagaaaaaatgaaatagatgagaaaatcacttatttcgataaaa 11655971  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
     ||||  ||||||||||||| ||   ||||||| |||||||||||||  ||||||||||||    
T  11655972 aggaacgagaaaaacgagttggaagagtgatttcgggtcaaaaattgatcctaaatcaccc 11656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 26937673 - 26937514
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||| ||||||||||| ||||| ||||| ||  |||| |||||| ||   || ||||  || ||||| || ||| ||||||||||||||||||||    
T  26937673 cgcacaaagtcgacgaacaaaccaacgacgcactaagacgacaaaatcataatcaaagaaactaaatagatgtgagaattacttatttcaataaaaggga 26937574  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || || |||||||||||||| |||||||||| ||||||| ||  |||||||| |||||||    
T  26937573 aaaaggaaaacgagttagaggggtgattttgagtcaaaacttaaccctaaataacccctc 26937514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 31147805 - 31147919
Alignment:
Q  50 cgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaa 149  Q
    |||||||||||||||||||||| || || ||||| ||||||||||||| ||||||||||||||  ||||||||||| ||||   |  |||||||||||||    
T  31147805 cgacgaaatcacaaaataaaaagcgaaatagatgtgaaaatcacttatgtcaataaaagggaacgagaaaaacgag-tagatgagcaattttgggtcaaa 31147903  T
Q  150 aattgtccctaaatca 165  Q
    ||||| ||||||||||    
T  31147904 aattgaccctaaatca 31147919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 37129639 - 37129756
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||  ||||||||||| | || ||||||||||||||||||||  || || ||||| ||||||||||||||||||||||||     
T  37129639 gtcgcacaaagacgacgaacaac-caacgtcgcacaagac-gacgaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaaga 37129734  T
Q  110 gaaatagaaaaacgagttagag 131  Q
     |||||||||||| ||| ||||    
T  37129735 aaaatagaaaaacaagtaagag 37129756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 1215301 - 1215454
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||| ||| |||||| ||||||| ||| ||  ||||||||||||||||  |||| |  |   |||| ||||||||||||||| |||||||    
T  1215301 acgtcgcacaaagatgacaaacaaaacaacgtcacactaagacgacgaaatcacaaaaggaaaacctaattcgatgtgaaaatcacttatttaaataaaa 1215400  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaa 161  Q
    | |||  ||||||| || |||||| |||||||| ||||||||||||| ||||||    
T  1215401 gagaaggagaaaaatgatttagagcggtgatttggggtcaaaaattggccctaa 1215454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 5457223 - 5457150
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacaga 81  Q
    ||||||||| |||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  5457223 acgtcgcacgaagacgacgaactaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgtaacaga 5457150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 16809024 - 16808889
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||| ||||||||  ||||||| |||  |  |||| |||||||||||||||||||| || ||||| || |||||||||||||||||||| |||    
T  16809024 cgcacaaagaccacgaacaacccaacgtcccacttagacgac-aaatcacaaaataaaaaacgaaatagatgtgataatcacttatttcaataaaa-gga 16808927  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaa 149  Q
    || ||||||| ||||||||  ||||||||||| |||||    
T  16808926 aagagaaaaatgagttagatgggtgattttggatcaaa 16808889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 32920802 - 32920641
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||| |||||| ||  || |||| ||  |||||||||||||||| ||||| |  |   |||| ||||||||||||||| ||||||| |    
T  32920802 gtcgcacaaagacgacaaacaaaacattgttgcactaagacgacgaaatcacaaaagaaaaacctaattcgatgtgaaaatcacttatttaaataaaaag 32920703  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||  |||||||||| |||||| |||||||| ||| |||| |||| ||||||| ||||||||    
T  32920702 gaaggagaaaaacgatttagagcggtgatttaggggcaaagattgaccctaaaccacccctc 32920641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 14327631 - 14327468
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||||||||| ||  |||| |||||||||||  |||| |  |   ||||  |||||||||||||| |||||||    
T  14327631 acgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgactaaatcacaaaaggaaaacctaattcgatgttaaaatcacttatttaaataaaa 14327532  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||  ||||||||||  | ||| ||||| || ||||||||||||| ||||||| ||||||||    
T  14327531 tggaagaagaaaaacgatatggaggggtgaattggggtcaaaaattgaccctaaaccacccctc 14327468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 16938238 - 16938397
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaa 112  Q
    ||||||| |||||||||| | ||| ||||||| ||  |||||||||||  ||| |||||||  || ||||| |||||||||||||||||| |||||||||    
T  16938238 gcacaaatacgacgaacacaacaaagtcgcactaagacgacgaaatcatgaaagaaaaaacaaaatagatgtgaaaatcacttatttcaacaaaagggaa 16938337  T
Q  113 atagaaaaacgagttagagaggtgattt-tgggtcaaaaattgtccctaaatcacccctc 171  Q
    | |||||||| ||||| ||   |||||| |||   |||||||| ||||||||||||||||    
T  16938338 agagaaaaacaagttaaaggaatgatttatggtaaaaaaattgaccctaaatcacccctc 16938397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 23766891 - 23766736
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||||||||||  ||  |||||  ||   ||||||||||| ||| ||||| || || | ||| ||||||||||||||| |||||||    
T  23766891 acgtcgcacaaagacgacgaacaaaataatttcgcattaagatgacgaaatcacgaaagaaaaa-cgaaataaatgtgaaaatcacttattttaataaaa 23766793  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcac 166  Q
     | |||||||||||||||||  |  |||||||||||||||||||||| || ||||||||    
T  23766792 tgaaaatagaaaaacgagtt--atgggtgattttgggtcaaaaattgaccttaaatcac 23766736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 5328099 - 5327989
Alignment:
Q  28 acaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcactta-tttcaataaaagggaaatagaaaaacgagt 126  Q
    ||||| |||||||| |||||| | | ||||||||||||||||||||  || ||||| |||||||||||| ||||||||| ||||||| ||||||| ||||    
T  5328099 acaaaccaacgtcggacgaaaacaaagaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttattttcaataatagggaaagagaaaaatgagt 5328000  T
Q  127 tagagaggtga 137  Q
    ||||| |||||    
T  5327999 tagaggggtga 5327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 32061944 - 32061783
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||| |||||| || |||||||| ||  ||||||||||||||||  |||| |  |    ||  ||||||||||||||| |||||| ||    
T  32061944 gtcgcacaaagacgacaaacaaaacagcgtcgcactaagacgacgaaatcacaaaaggaaaacctaattcaatatgaaaatcacttatttaaataaaggg 32061845  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||  ||| |||||| |||||  |||||||| ||||||||||||| |||||||  |||||||    
T  32061844 gaaggagagaaacgatttagaagggtgatttggggtcaaaaattgaccctaaactacccctc 32061783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 6833630 - 6833471
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||  ||| |||| |||||| ||  | || |||||||||||||||||||  || |||||  |||||||||||||| | |||||      
T  6833630 gtcgcacaaagacgacgagtaaaccaacatcgcactaagacaacaaaatcacaaaataaaaaacaaaatagatgtaaaaatcacttattttattaaaata 6833531  T
Q  110 gaaatag-aaaaacgagttagagaggtga-ttttgggtcaaaaattgtccctaaatcacc 167  Q
     ||| || |||||| |||||||| ||||| ||||||||||||||||   |||||||||||    
T  6833530 aaaagagaaaaaaccagttagaggggtgatttttgggtcaaaaattaatcctaaatcacc 6833471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 167
Target Start/End: Original strand, 284494 - 284596
Alignment:
Q  65 ataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatc 164  Q
    |||||||||| || ||||| ||||||||| |||||||| |||||  ||  |||||||||||||| || ||| ||||||||||||||||||  | ||||||    
T  284494 ataaaaaacgaaatagatgtgaaaatcacatatttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatc 284593  T
Q  165 acc 167  Q
    |||    
T  284594 acc 284596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 167
Target Start/End: Complemental strand, 631383 - 631281
Alignment:
Q  65 ataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatc 164  Q
    |||||||||| || ||||| ||||||||| |||||||| |||||  ||  |||||||||||||| || ||| ||||||||||||||||||  | ||||||    
T  631383 ataaaaaacgaaatagatgtgaaaatcacatatttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatc 631284  T
Q  165 acc 167  Q
    |||    
T  631283 acc 631281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 167
Target Start/End: Complemental strand, 817195 - 817093
Alignment:
Q  65 ataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatc 164  Q
    |||||||||| || ||||| ||||||||| |||||||| |||||  ||  |||||||||||||| || ||| ||||||||||||||||||  | ||||||    
T  817195 ataaaaaacgaaatagatgtgaaaatcacatatttcaacaaaagaaaatgagaaaaacgagttaaagcggtaattttgggtcaaaaattgatcataaatc 817096  T
Q  165 acc 167  Q
    |||    
T  817095 acc 817093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 18190806 - 18190966
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaaca-gatgcgaaaatcacttatttcaataaa 106  Q
    ||||||||||||||| || |||||| ||  ||||||| ||  ||||||||||||||||  |||| | |||   |||| ||||||||||||||| |||| |    
T  18190806 acgtcgcacaaagacaacaaacaaaacagggtcgcactaagacgacgaaatcacaaaaggaaaa-cttaattcgatgtgaaaatcacttatttaaataga 18190904  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||||  | |||||||| |||||  |||||||| | ||||||||||| ||||||| |||||    
T  18190905 agggaaggataaaaacgatttagattggtgatttggagtcaaaaattgaccctaaaccaccc 18190966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 37719983 - 37719843
Alignment:
Q  28 acaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaa-cgagt 126  Q
    ||||| ||||||||||| ||  |||||||||||| ||| |||||  | || ||||| |||||||| |||||||||||||| | ||| | ||||| |||||    
T  37719983 acaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaat-gaaatagatgtgaaaatcatttatttcaataaaatgaaaagataaaaaacgagt 37719885  T
Q  127 tagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    || | | |||||||| | |||||||||| |||||||||||||    
T  37719884 taaaaaagtgattttagttcaaaaattgaccctaaatcaccc 37719843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 12244182 - 12244340
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||  |||||||||| ||||||||||| ||   ||||||||||| ||| |||||||| || | ||  ||||||||||||| |||| ||||||||    
T  12244182 cgcacaaagttgacgaacaaaacaacgtcgcactaagatgacgaaatcacgaaagaaaaaacgaaataaatttgaaaatcacttatatcaacaaaaggga 12244281  T
Q  112 aataga--aaaacgagttagagaggtgattttgggt-caaaaattgtccctaaatcaccc 168  Q
    || |||  ||||||||||| ||  |||||||||| |  |||||||| ||| |||||||||    
T  12244282 aa-agatgaaaacgagttaaaggagtgattttggataaaaaaattgacccaaaatcaccc 12244340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 17019265 - 17019205
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaac 73  Q
    |||||||||||||||||||| ||||||||||| ||  |||| |||||||||||||||||||    
T  17019265 gcacaaagacgacgaacaaaccaacgtcgcactaagacgaccaaatcacaaaataaaaaac 17019205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 17549702 - 17549642
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaac 73  Q
    |||||||||||||||||||| ||||||||||| ||  |||| |||||||||||||||||||    
T  17549702 gcacaaagacgacgaacaaaccaacgtcgcactaagacgaccaaatcacaaaataaaaaac 17549642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 14530942 - 14531033
Alignment:
Q  80 gatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| ||||||||||||||| |||| ||| |||  |||||||||| |||||  |||||||| | ||||||||||| ||||||| ||||||||    
T  14530942 gatgtgaaaatcacttatttaaatagaagagaaggagaaaaacgatttagaagggtgatttggagtcaaaaattgaccctaaaccacccctc 14531033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 3925654 - 3925758
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||| ||| ||| || |||| ||  |||||||||||||||| || ||||| || ||||| | |||| |||||||| | |||||||    
T  3925654 gtcgcacaaagacgacgaaaaaaacaaggttgcactaagacgacgaaatcacaaaa-aagaaacgaaatagatgtgtaaataacttattttagtaaaagg 3925752  T
Q  110 gaaata 115  Q
    ||||||    
T  3925753 gaaata 3925758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 12248676 - 12248733
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaa 65  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  ||||||||||||||||    
T  12248676 acgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcacaaaa 12248733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 17019167 - 17019110
Alignment:
Q  97 tttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    ||||||||||||||||| |||||||| | |||||  ||||||||||||||||||||||    
T  17019167 tttcaataaaagggaaagagaaaaacaatttagaagggtgattttgggtcaaaaattg 17019110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 17549604 - 17549547
Alignment:
Q  97 tttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    ||||||||||||||||| |||||||| | |||||  ||||||||||||||||||||||    
T  17549604 tttcaataaaagggaaagagaaaaacaatttagaagggtgattttgggtcaaaaattg 17549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 27534433 - 27534524
Alignment:
Q  80 gatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| ||||||||||||||| ||||||| ||||  |||||||| |  ||||| |  ||||| || |||||||||| ||||||||||||||||    
T  27534433 gatgtgaaaatcacttatttaaataaaaaggaaggagaaaaacaatgtagagggacgatttgggatcaaaaattgaccctaaatcacccctc 27534524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 14115793 - 14115855
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaac 73  Q
    ||||| |||||| ||||||||| ||||||| ||||||   |||||||||||||||||||||||    
T  14115793 tcgcaaaaagacaacgaacaaaccaacgtcacacgaagatgacgaaatcacaaaataaaaaac 14115855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 31713038 - 31713134
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcg-aaaatcacttatttcaata 104  Q
    ||||||||||||||||||||||||| |||| |||||| ||  |||| ||||||| ||| ||||||   || ||||| | |||||||||||||| ||||    
T  31713038 acgtcgcacaaagacgacgaacaaaacaacatcgcacaaagacgac-aaatcacgaaagaaaaaataaaatagatgtgaaaaatcacttattttaata 31713134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 2e-58; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 1165358 - 1165521
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  1165358 acgttgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 1165457  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  1165458 gggaaaaagaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 1165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 43029835 - 43029672
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  43029835 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 43029736  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||| |||||||| ||||||||||||||||||| ||  |||||||||||||||    
T  43029735 gggaaaaggaaaaacaagttagaggggtgattttgggtcaaaaaatgatcctaaatcacccctc 43029672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 20201026 - 20201183
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    |||||||| ||| |||||| ||| ||||||||||| ||||||||||| ||||||||||||  || ||||| |||||||||||||||||||||||| ||||    
T  20201026 cacaaagatgacaaacaaaccaatgtcgcacgaaaacgacgaaatcataaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagtgaaa 20201125  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  20201126 gagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 20201183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 20203208 - 20203365
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    |||||||| ||| |||||| ||| ||||||||||| ||||||||||| ||||||||||||  || ||||| |||||||||||||||||||||||| ||||    
T  20203208 cacaaagatgacaaacaaaccaatgtcgcacgaaaacgacgaaatcataaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagtgaaa 20203307  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  20203308 gagaaaaacgagttagaggggtgattttgggtcaaaaattgaccctaaatcacccctc 20203365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 14741288 - 14741431
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||| | || ||||| |||||||||||||||||||||||    
T  14741288 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaa 14741386  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaat 152  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||    
T  14741387 gggaaagagaaaaacgagttagagaggtgattttgggttaaaaat 14741431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 21803682 - 21803519
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||  | ||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||    
T  21803682 acgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagactacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttgtttcaataaaa 21803583  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    | |||| ||||||||||||||||| |||||||||||||||||||||| | || |||||| ||||    
T  21803582 gagaaagagaaaaacgagttagaggggtgattttgggtcaaaaattgacactgaatcactcctc 21803519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 41882372 - 41882533
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||| ||||||||||||||| ||    
T  41882372 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaa-tcacttatttcaatacaa 41882469  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||    
T  41882470 gggaaatagaaaaacgagttagaggggtaattttgggtcaaaaattgaccctaaatcactcctc 41882533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 22286713 - 22286874
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||||||||||||| || ||||| |||| | ||||||||||||||||    
T  22286713 acgtcgcacaaagacgacgaacaac-caacgtcgcgcgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaatt-acttatttcaataaaa 22286810  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    || ||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||||||||    
T  22286811 ggaaaatagaaaaacgagttagaggggtaattttaggtcaaaaattgaccctaaatcacccctc 22286874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 35501721 - 35501881
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||| |||||||  |||||| || |||  |||| |||||||||||||||||||| || ||||| |||||||| |||||||| |||||    
T  35501721 acgtcgcacaaagacgatgaacaaactaacgtcacatgaagacgacaaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcagtaaaa 35501820  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  35501821 gggaaagagaaaaacgagttagaggggtgattttgggtcaaaaattaaccctaaatcaccc 35501881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 3088626 - 3088763
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||    
T  3088626 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaa 3088723  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtca 147  Q
    || |||||||||||||| |||||| |||||||||||||||    
T  3088724 ggaaaatagaaaaacgaattagaggggtgattttgggtca 3088763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 29182570 - 29182705
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||  || ||||  |||||||||||||||||||||||    
T  29182570 acgtcgcacaaagacgacgaacaaaccaacgtcacacgaagacgacgaaatcacaaaataaaaaacaaaatagatatgaaaatcacttatttcaataaaa 29182669  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgg 143  Q
    |||||| ||||||||||||||||| | |||||||||    
T  29182670 gggaaagagaaaaacgagttagagggatgattttgg 29182705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 50519899 - 50519782
Alignment:
Q  50 cgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaa 149  Q
    ||||||||||| ||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50519899 cgacgaaatcaaaaaataaaaaacgaaatagatgtgaaa-tcacttatttcaataaaagggaaatagaaaaacgagttagaggggtgattttgggtcaaa 50519801  T
Q  150 aattgtccctaaatcaccc 168  Q
    ||||| |||||||||||||    
T  50519800 aattgaccctaaatcaccc 50519782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 43839493 - 43839638
Alignment:
Q  21 acgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaa 120  Q
    |||||||||||| |||| |||||||||   |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||    
T  43839493 acgacgaacaaaccaacatcgcacgaagatgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaa 43839592  T
Q  121 acgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
     |||||||||| ||||| ||| |||||||||||| |||||||||||||    
T  43839593 gcgagttagag-ggtgacttt-ggtcaaaaattgaccctaaatcaccc 43839638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 12 - 167
Target Start/End: Original strand, 40461961 - 40462116
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||||||||||||||||||| |||||| ||  |||| ||||||||||||||||| || || |||||  |||| | | |||||||||||||||||    
T  40461961 cgcacaaagacgacgaacaaatcaacatcgcactaagacgacaaaatcacaaaataaaaaccgaaatagatgtaaaaaccgcgtatttcaataaaaggga 40462060  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    || |||||||| |||||||| |||||||||||||||||| ||| | ||||||||||    
T  40462061 aagagaaaaacaagttagaggggtgattttgggtcaaaatttgactctaaatcacc 40462116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 25374032 - 25374192
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||| ||||||  |||||| ||| ||||||| ||  ||  ||||||||||||||||||| | || ||||| |||||||||||||||||| ||||    
T  25374032 acgtcgcacatagacgataaacaaaccaaagtcgcactaagacggagaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaagaaaa 25374131  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    || ||| ||||||||||||||||| ||||||||| |||||||||||  |||||||||||||    
T  25374132 ggaaaagagaaaaacgagttagaggggtgattttaggtcaaaaattaaccctaaatcaccc 25374192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 22844204 - 22844040
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  ||| |||||||| ||| ||||||   || |||||||||||||| ||||||||||||||    
T  22844204 acgtcgcacaaagacgacgaacaaaacaatgtcgcactaagacgatgaaatcacgaaagaaaaaataaaatagatgcgaaaatcatttatttcaataaaa 22844105  T
Q  108 gggaaatagaaa-aacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |  || || ||| |||||||||||| |||||||||||||||||||||| || ||||||| |||||    
T  22844104 gataattaaaaagaacgagttagaggggtgattttgggtcaaaaattgaccttaaatcagccctc 22844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 28995271 - 28995391
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||| ||||||||||||||||  || || ||||| |||||||||||||||||||||||    
T  28995271 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgacaaaatcacaaaataaaa--cgaaatagatgtgaaaatcacttatttcaataaaa 28995367  T
Q  108 gggaaatagaaaaacgagttagag 131  Q
    ||||||||||||||||||| ||||    
T  28995368 gggaaatagaaaaacgagtaagag 28995391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 42106264 - 42106100
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||  ||| ||||||||||| ||  || ||||||||  |||  ||||||| || | ||| |||||||||||||||||||||||    
T  42106264 acgtcgcacaaagacgacgataaaaacaacgtcgcactaagacggcgaaatcaggaaagcaaaaacgaaatatatgtgaaaatcacttatttcaataaaa 42106165  T
Q  108 gggaaataga-aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||| |||||  ||||||  ||||||||| |||||||||||| ||||||||||||||||    
T  42106164 gggaaatagaaaaaacaggttagatgggtgattttaggtcaaaaattgaccctaaatcacccctc 42106100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 20251809 - 20251640
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaa-----taaaaaacgtaacagatgcgaaaatcacttatttcaa 102  Q
    ||||| ||||||||||||||||||| ||||||||||||||  |||| |||||||||||     |||||||   || ||||  ||||||||||||||||||    
T  20251809 acgtcacacaaagacgacgaacaaaccaacgtcgcacgaagacgacaaaatcacaaaacaaaataaaaaagaaaatagatatgaaaatcacttatttcaa 20251710  T
Q  103 taaaagggaaatagaaaaacgagttagagaggtgattttgggt-caaaaattgtccctaaatcacccctc 171  Q
    | ||||||||| ||||||||||||||||  |||||||||||||  |||||| | ||||||||||||||||    
T  20251709 tcaaagggaaagagaaaaacgagttagaagggtgattttgggtaaaaaaatcgaccctaaatcacccctc 20251640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 47914556 - 47914687
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||| ||||||||||| |||||  ||||||||||||||  ||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||    
T  47914556 acgtcggacaaagacgacaaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttttttcaataaaa 47914654  T
Q  108 gggaaatagaaaaacgagttagagaggtgatttt 141  Q
     ||||| | ||||||||||||||| |||||||||    
T  47914655 tggaaaga-aaaaacgagttagaggggtgatttt 47914687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 38 - 165
Target Start/End: Complemental strand, 33076434 - 33076307
Alignment:
Q  38 gtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtga 137  Q
    ||||||||||| |||| |||||||||||||||||||| || |||||  |||||||||||||||||||||||| ||| || |||| ||||||||| |||||    
T  33076434 gtcgcacgaaaacgacaaaatcacaaaataaaaaacgaaatagatgtaaaaatcacttatttcaataaaaggaaaagaggaaaatgagttagaggggtga 33076335  T
Q  138 ttttgggtcaaaaattgtccctaaatca 165  Q
    |||||| |||||| ||  ||||||||||    
T  33076334 ttttggatcaaaagttaaccctaaatca 33076307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 33977887 - 33978041
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  ||| ||||||||||||||||| |   || |||||  ||||||||||||||||||||||    
T  33977887 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaagacgatgaaatcacaaaataaaacaa--aatagatgtaaaaatcacttatttcaataaaa 33977983  T
Q  108 gggaaatag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    ||||||||| ||||||||||||   | | ||||||||||||||||||| || |||||||||    
T  33977984 gggaaatagaaaaaacgagtta---aagggattttgggtcaaaaattgaccttaaatcacc 33978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 40797185 - 40797023
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||| ||| ||  || ||||||||  |||  ||||||| || ||||| |||||||| ||||||||||||||    
T  40797185 acgtcgcacaaagacgacgaacaaaacaatgtctcactaagacggcgaaatcatgaaagcaaaaacgaaatagatgtgaaaatcatttatttcaataaaa 40797086  T
Q  108 gggaaataga-aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    |||||||||| ||||| |||||||| ||||||||||| || ||||||  |||||||||||||||    
T  40797085 gggaaatagaaaaaacaagttagaggggtgattttggctc-aaaattaaccctaaatcacccct 40797023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 45664373 - 45664218
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||| | |||||| |||  ||||| |||||||  | ||||||||||||||||||||||| || ||||| ||||||||||||        |||    
T  45664373 acgtcgcacaaatatgacgaaaaaacgaacgtagcacgaagacaacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcactta--------aaa 45664282  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    | |||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||    
T  45664281 gagaaatagaaaaacgagttagaggggtgattttgggtcaaaatttgatcctaaatcacccctc 45664218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 913278 - 913426
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| | ||||| ||  |  ||||||||| |||  ||||||| || ||||| |||||||||||||||||| ||||    
T  913278 acgtcgcacaaagacgacgaacaaaacaatgccgcactaagacagcgaaatcacgaaagcaaaaacgaaatagatgtgaaaatcacttatttcaaaaaaa 913377  T
Q  108 gggaaatag--aaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    |||||||||  ||||||  ||||||| ||||||||||||||||||||||    
T  913378 gggaaatagaaaaaaacatgttagaggggtgattttgggtcaaaaattg 913426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 53426944 - 53426799
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    |||||||| |||||||||   |||||||||| ||  |||||||||||||||| |||||| | || ||||| |||||||||||||||||||      ||||    
T  53426944 cacaaagatgacgaacaacaaaacgtcgcactaagacgacgaaatcacaaaagaaaaaatgaaatagatgtgaaaatcacttatttcaat------gaaa 53426851  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
     ||||||||||||||||| |||||||||| || |||||||| ||||||||||    
T  53426850 gagaaaaacgagttagaggggtgattttgcgtaaaaaattgaccctaaatca 53426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 1220255 - 1220340
Alignment:
Q  86 aaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||  ||||||||||  |||||||||||||||    
T  1220255 aaaatcacttatttcaacaaaagggaaagagaaaaacgagttagaggggtgattttgaatcaaaaattgatcctaaatcacccctc 1220340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 22893684 - 22893838
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaat-aaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||| |||||||||| ||||||||||| ||   |||||||||||||||| |||||||| || || || ||||||||||||||  ||||||||||||     
T  22893684 acaaagatgacgaacaaaccaacgtcgcactaagaagacgaaatcacaaaataaaaaaacgaaataggtgtgaaaatcacttattctaataaaagggaa- 22893782  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
     |||||||| |||||||  |||||||||||| ||||||||  | ||| |||||||||    
T  22893783 -agaaaaacaagttagaagggtgattttgggacaaaaattaactctagatcacccct 22893838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 54240235 - 54240150
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcactta 96  Q
    ||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||| || ||||| ||||||||||||    
T  54240235 tcgcacaaagacgtcgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcactta 54240150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 4019743 - 4019591
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||||  ||||||||||| ||  |||||||||||| ||  |||||  | || ||||| ||| ||| ||||||||||| ||||       
T  4019743 cgcacaaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaagaaaaaagtgaaatagatgtgaagatcgcttatttcaatgaaag--- 4019647  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
       |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  4019646 ---agaaaaacgagttagagaggtgattttgagtc-aaaattgaccctaaatcacccctc 4019591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 29776659 - 29776784
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaat 114  Q
    ||||||||||||||||||  |||||||||| ||   ||| ||||||||||||||||| || || ||||| ||||| ||||||||||| |||| ||||||     
T  29776659 acaaagacgacgaacaaacaaacgtcgcacaaagatgacaaaatcacaaaataaaaa-cgaaatagatgtgaaaaccacttatttcagtaaa-gggaaag 29776756  T
Q  115 agaaaaacgagttagagaggtgattttg 142  Q
    ||||||||||||||||| ||||||||||    
T  29776757 agaaaaacgagttagaggggtgattttg 29776784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 36540645 - 36540776
Alignment:
Q  18 aagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaataga 117  Q
    |||||||||| |||| ||||||||||| ||  |||||||||||| ||| ||||| |  || | ||| ||||||||||||||||||||||||||||||||     
T  36540645 aagacgacgatcaaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaa-caaaataaatgtgaaaatcacttatttcaataaaagggaaatag- 36540742  T
Q  118 aaaacgagttagagaggtgattttgggtcaaaaa 151  Q
    |||||||||||||  | ||| |||||||||||||    
T  36540743 aaaacgagttagaaggttgactttgggtcaaaaa 36540776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 21586042 - 21585950
Alignment:
Q  17 aaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||| ||||||||||| ||| ||   |||||||||||||||||||||||  || ||||| |||||||||||||||||||||||||    
T  21586042 aaagacgacgaataaatcaacgtcacactaagatgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaagg 21585950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 26412438 - 26412342
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaa 150  Q
    |||||||||||| ||| |||| || ||||| ||||||| ||||||||||||||||||| | |||||||||| ||||||| ||||||||| |||||||    
T  26412438 gaaatcacaaaagaaagaacgaaatagatgtgaaaatcgcttatttcaataaaagggagagagaaaaacgacttagagatgtgattttgagtcaaaa 26412342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 34767054 - 34766992
Alignment:
Q  85 gaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaa 148  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  34767054 gaaaatcacttatttcaataaaagggaaagagaaaaacgagttagag-ggtgattttgggtcaa 34766992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 2598189 - 2598091
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaat 152  Q
    |||||||||||| |||||| | || ||||| |||||||| |||||||||||||||  ||| | |||||||||||||||  |||||||||||||||||||    
T  2598189 gaaatcacaaaagaaaaaatggaatagatgtgaaaatcagttatttcaataaaagcaaaagataaaaacgagttagaggagtgattttgggtcaaaaat 2598091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 12 - 168
Target Start/End: Original strand, 25939445 - 25939598
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||||||| |||||| |||||||||||  |  | |||||||||| ||| |||||||  || ||||| |||||| |||||||| |||||||| ||    
T  25939445 cgcacaaagacgactaacaaaacaacgtcgcactgagacaacgaaatcacgaaagaaaaaacagaatagatgtgaaaataacttatttgaataaaagaga 25939544  T
Q  112 aatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
     |   ||| |||||||  | | ||||||||||||||||||||| |||||||||||||    
T  25939545 ga---aaatacgagtttcaaatgtgattttgggtcaaaaattgaccctaaatcaccc 25939598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 32237962 - 32238071
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||||||||||||| |||| |||||| ||   ||| |||||||||||||||||| | || ||||  ||||||||||||||||||| |||||||    
T  32237962 cgcacaaagacgacgaacaaaccaacatcgcacaaagatgacaaaatcacaaaataaaaaatgaaatagatatgaaaatcacttatttcaat-aaaggga 32238060  T
Q  112 aatagaaaaac 122  Q
    || ||||||||    
T  32238061 aagagaaaaac 32238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 39340347 - 39340217
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||||||||||| |||| ||| ||||||| ||  ||   ||||||| ||| |||||||| || ||||| ||||||||||||||||||||||| | |    
T  39340347 cgcacaaagacgacgagcaaaacaaagtcgcactaagacggtaaaatcacgaaagaaaaaacggaatagatgtgaaaatcacttatttcaataaaaagaa 39340248  T
Q  112 aatagaaaaacgagttagagaggtgattttg 142  Q
    || |||||||| |||||||| | ||||||||    
T  39340247 aagagaaaaacaagttagagggatgattttg 39340217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 32089898 - 32089991
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||| |||||  || ||||||| ||  ||||||||||||||||||||||| | || ||||| |||||||||||||||||||||||    
T  32089898 cacaaagacgacggacaaagtaatgtcgcactaagacgacgaaatcacaaaataaaaaatgaaatagatgtgaaaatcacttatttcaataaaa 32089991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 37051750 - 37051613
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    ||||||||||| ||  ||||||||||||||||  |||| |  |   |||| |||||||||||| || |||| |||||||  |||||||||| |||||| |    
T  37051750 caacgtcgcactaagacgacgaaatcacaaaaggaaaacctaattcgatgtgaaaatcacttacttaaatagaagggaaggagaaaaacgatttagaggg 37051651  T
Q  134 gtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||||||||| |||||||||| |||||    
T  37051650 gtgattcagggtcaaaaattgaccctaaatcatccctc 37051613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 168
Target Start/End: Complemental strand, 43242886 - 43242803
Alignment:
Q  85 gaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    ||||| ||||||||||| ||||||||| | |||||||||||||| |  |||||||||| |||||||| || |||||||||||||    
T  43242886 gaaaaacacttatttcagtaaaagggacagagaaaaacgagttaaatgggtgattttgtgtcaaaaactgaccctaaatcaccc 43242803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 50460337 - 50460183
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||| ||||||||| |||| |||||| ||  |||| ||||||| ||| |||||    || ||||| |||||||||||||||||||||||| ||||    
T  50460337 cacaaagacaacgaacaaaacaacatcgcactaaggcgacaaaatcacgaaagaaaaataa-aatagatgtgaaaatcacttatttcaataaaagagaaa 50460239  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||||||||| |  |  |||||||||  ||||||||||| || ||||||| |||||    
T  50460238 gagaaaaacgaggt--atgggtgattttatgtcaaaaattgaccttaaatcatccctc 50460183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 27831247 - 27831101
Alignment:
Q  25 cgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaataga-aaaacg 123  Q
    |||||||| ||||||||||| ||  | |  |||||||||||| ||||||| || ||||| ||||| |||||||||||||| || ||| | ||| ||| |     
T  27831247 cgaacaaaccaacgtcgcactaagacaaaaaaatcacaaaatcaaaaacggaatagatgtgaaaaacacttatttcaatagaatggatagagagaaacca 27831148  T
Q  124 agttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||  ||||||||| |||| ||||||| ||| ||||||||||||    
T  27831147 agttagatgggtgattttaggtc-aaaattgaccccaaatcacccctc 27831101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 21085910 - 21086065
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||||||||||||| |||||| |||| |   | |||||||||||||| ||||||   || ||||| |||||||||| |||| |||||||| |||     
T  21085910 cacaaagacgacgaacaaaacaacgttgcacaatggctacgaaatcacaaaagaaaaaa-aaaatagatgtgaaaatcactcattt-aataaaagagaag 21086007  T
Q  114 tagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
      || |||||| ||||||||||||| |  |||||| ||||| ||| |||| |||||||    
T  21086008 gtgataaacgatttagagaggtgatatgaggtcaagaattgacccaaaattacccctc 21086065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 40365371 - 40365290
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcactta 96  Q
    ||||||||||| |||||| ||||||||||  ||   ||| |||||||||||||||||||  || ||||| ||||||||||||    
T  40365371 acaaagacgacaaacaaaccaacgtcgcattaagatgacaaaatcacaaaataaaaaacaaaatagatgtgaaaatcactta 40365290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 7656480 - 7656516
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaa 47  Q
    |||||||||||||||||||||| ||||||||||||||    
T  7656480 tcgcacaaagacgacgaacaaaccaacgtcgcacgaa 7656516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 7656534 - 7656592
Alignment:
Q  103 taaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaat 163  Q
    ||||| ||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  7656534 taaaaaggaaagagaaaaacgagttagag-ggtga-tttgggtcaaaaattgaccctaaat 7656592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 4e-56; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 4726890 - 4727057
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||||||| || |||| |||||||||  ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  4726890 acgtcgcacaaagacgacgaactaaccaacatcgcacgaagacgacgaaatcacaaaataagaaatgtaacagatgtgaaaatcacttatttcaataaaa 4726989  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccgac 175  Q
    ||||||||||||||||||||| |  | |||||||||||||||||||| |||||||| |||||||||||    
T  4726990 gggaaatagaaaaacgagttatatggatgattttgggtcaaaaattgaccctaaattacccctccgac 4727057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 6887140 - 6887303
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||||  || ||||| |||||||||||||||||||||||    
T  6887140 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaagaaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 6887239  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  6887240 gggaaaaggaaaaacaagttagaggggtgattttgggttaaaaattgaccctaaatcacccctc 6887303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 31645981 - 31645818
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||  || ||||| |||||||||||||||||||||||    
T  31645981 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgaagaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaa 31645882  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||  ||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  31645881 gggaaaaggaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctc 31645818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 28618754 - 28618593
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||| ||||||  ||||||||||||||  ||||||||||||||||||||||||  || ||||| |||| ||||||||||||||||||    
T  28618754 acgtcgcacaaagacgatgaacaac-caacgtcgcacgaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaa-tcacttatttcaataaaa 28618657  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||||    
T  28618656 gggaaatagaaaaacgagttagaggggtgattttgggttaaaaattgaccttaaatcacccctc 28618593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 29310316 - 29310474
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||     ||||| |||||||||||||||||||||||    
T  29310316 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaac-----agatgtgaaaatcacttatttcaataaaa 29310410  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||   |||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  29310411 gggaaaagaaaaaacaagttagaggggtgattttggatcaaaaattgaccctaaatcacccctc 29310474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 33486531 - 33486695
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||| ||  |||||||||||||||| || ||||| || ||||| | |||||||||||||||||||||    
T  33486531 acgtcgcacaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaa 33486630  T
Q  108 gggaaatag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||| |||||| |||||||  |||||||||||||||||||||| ||||||||||||||||    
T  33486631 gggaaatagaaaaaacaagttagatgggtgattttgggtcaaaaattgaccctaaatcacccctc 33486695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 4070703 - 4070545
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||  || || | ||| |||||||||||||||||||||||    
T  4070703 acgtcgcacaaagacgacgaacaac-caacgtcgcacgaatacgacgaaatcacaaaataaaa--cgaaataaatgtgaaaatcacttatttcaataaaa 4070607  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
     |||||||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||    
T  4070606 aggaaatagaaaaacgagtcagaggggtgattttgggtcaaaaa-tgaccctaaatcacccct 4070545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 2415550 - 2415393
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||| ||||||||| |||||||||| |||  |||| |||||||||||||||||| | || | ||  |||||||||||||||||||||||||    
T  2415550 gtcgcacaaagacaacgaacaaaccaacgtcgcatgaagacgacaaaatcacaaaataaaaaatgaaatatatatgaaaatcacttatttcaataaaagg 2415451  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||| |||||||| |||||||  |||||||||||||||||||||| ||||||||||||    
T  2415450 gaaaaagaaaaacaagttagaagggtgattttgggtcaaaaattgaccctaaatcacc 2415393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 5378452 - 5378317
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||| |||  |||||||||  ||||||||||||||||||||||| | |||| ||  |||||||||||||||||||||||||    
T  5378452 gtcgcacaaagacgacgaacaaaccaatttcgcacgaagacgacgaaatcacaaaataaaaaatgcaacaaatatgaaaatcacttatttcaataaaagg 5378353  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggt 145  Q
    |||||||||||||||||||||| |||||||| ||||    
T  5378352 gaaatagaaaaacgagttagaggggtgatttagggt 5378317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 37425148 - 37424982
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||||||||||| ||  |||| ||||||| ||| |||||||   | ||||| |||||||||||||||||||||||    
T  37425148 acgtcgcacaaagacgacaaacaaaacaacgtcgcacaaagacgacaaaatcacgaaagaaaaaacaacatagatgtgaaaatcacttatttcaataaaa 37425049  T
Q  108 gggaaataga---aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||| |   ||||||||||||||  |||||||||||||| |||||| || |||||||||||||    
T  37425048 gggaaatatatataaaacgagttagaggcgtgattttgggtcagaaattgaccataaatcacccctc 37424982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 41554639 - 41554475
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||| ||||||||| ||| ||| ||||||| ||  |||||||||||| | | || ||||| || ||||| | |||||||||||||||||||||    
T  41554639 acgtcgcacaaggacgacgaataaaacaaggtcgcactaagacgacgaaatcactacaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaa 41554540  T
Q  108 gggaaataga-aaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||||||| ||||| |||||||| ||||||||||| ||||||||||  |||||||||||||||    
T  41554539 gggaaatagaaaaaacaagttagaggggtgattttggatcaaaaattgatcctaaatcacccctc 41554475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 19646003 - 19646166
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||| |||||||||||| ||||||   ||| ||||| ||  |||  |||||||||||||||||||| || ||||| ||||||||||||||||| |||||    
T  19646003 acgtcacacaaagacgacaaacaaactgacgccgcacaaagacgataaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcattaaaa 19646102  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||||| ||||||| ||||||||| ||||||||||||||||| |||| || |||| ||||||||    
T  19646103 gggaaagagaaaaatgagttagaggggtgattttgggtcaaacattgaccttaaaccacccctc 19646166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 41063358 - 41063509
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||| ||||| |||| |||||| |||||||  |||||  ||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||    
T  41063358 acgtcgctcaaagccgacaaacaaaccaacgtcatacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcatttatttcaataaaa 41063457  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccct 159  Q
     ||||| ||||||||||||||||   ||||||||| ||||||||||| ||||    
T  41063458 tggaaagagaaaaacgagttagatgagtgattttgagtcaaaaattgaccct 41063509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 41358187 - 41358031
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    |||||||| |||||||||||| ||| ||||||| ||  |||| ||||||| ||  |||||| | || ||||| |||||| |||||||||||||||||| |    
T  41358187 cgcacaaacacgacgaacaaaacaatgtcgcactaagacgacaaaatcacgaaggaaaaaatgaaatagatgtgaaaataacttatttcaataaaaggaa 41358088  T
Q  112 aatagaaaaacgagttaga-gaggtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    || |||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  41358087 aagagaaaaacgagttagagggggtgattttgggtcaaaaattgaccctaaatcacc 41358031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 8812119 - 8812276
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||||||||||||| ||||||||||| ||  || ||||||||| |||  ||||||| || ||||  |||||||||||| |||||||||| |||||    
T  8812119 cacaaagacgacgaacaaaacaacgtcgcactaagacggcgaaatcacgaaagcaaaaacgaaatagatatgaaaatcacttacttcaataaaaaggaaa 8812218  T
Q  114 tag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccct 170  Q
    ||| ||||||  ||||||| ||||||||||||| |||||||| ||||| |||||||||    
T  8812219 tagaaaaaacatgttagaggggtgattttgggttaaaaattgaccctatatcacccct 8812276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 34893904 - 34894041
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagag 133  Q
    ||||||||||| ||  |||| |||||||||||||||||| | || ||||  |||||| ||||||||||||| || | ||| ||||||||||||||||| |    
T  34893904 caacgtcgcacaaagacgacaaaatcacaaaataaaaaatgaaatagatatgaaaattacttatttcaatataaagaaaagagaaaaacgagttagaggg 34894003  T
Q  134 gtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||||||||| || |||||||||||||    
T  34894004 gtgattttgggtcaaaaattgaccgtaaatcacccctc 34894041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 32390613 - 32390731
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggga 111  Q
    ||||||||||| || ||| || ||||||||||| ||   |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||    
T  32390613 cgcacaaagacaacaaacgaaccaacgtcgcactaatatgacgaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaaagga 32390712  T
Q  112 aatagaaaaacgagttaga 130  Q
    || ||||||||||||||||    
T  32390713 aagagaaaaacgagttaga 32390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 10924095 - 10924188
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttca 101  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| || |||||  ||||||||||||||||    
T  10924095 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaatagatgtaaaaatcacttatttca 10924188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 15710688 - 15710559
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||| |||||| || ||||||||||| ||   ||| ||||||  ||| |||||||| || ||||| |||||||||||||||||||||||||||||    
T  15710688 cacaaagacaacgaacgaaacaacgtcgcactaagatgacaaaatcatgaaagaaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaa 15710589  T
Q  114 tagaaaaacgagttagagaggtgattttgg 143  Q
     ||||||||||||||||| |||||||||||    
T  15710588 gagaaaaacgagttagaggggtgattttgg 15710559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 18472688 - 18472843
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||| ||||||| ||| ||| ||| ||  |||||||||||||||| || ||||  || ||||| | |||||||||||| ||||||||    
T  18472688 acgtcgcacaaagacgaggaacaaa-caaagtcacactaagacgacgaaatcacaaaa-aagaaacaaaatagatgtgtaaatcacttattgcaataaaa 18472785  T
Q  108 gggaaatagaaaaa-cgagttagagaggtgattttgggtcaaaaattgtccctaaatc 164  Q
    || ||||||||||| | |||||||| |||||||||||||||||||||| |||||||||    
T  18472786 ggaaaatagaaaaaacaagttagaggggtgattttgggtcaaaaattgaccctaaatc 18472843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 9034906 - 9035073
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaac------gtaacagatgcgaaaatcacttatttcaat 103  Q
    ||||||||||||||| ||||||| ||||||||||||||  ||| |||||||||||||||||||       | || ||||| |||  |||||||||| |||    
T  9034906 gtcgcacaaagacgaggaacaaaccaacgtcgcacgaagacgatgaaatcacaaaataaaaaaaaaaaatgaaatagatgtgaatgtcacttattttaat 9035005  T
Q  104 aaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||| ||||| ||||||||||||||||| | |||||||| |||||||||||  | |||||||||||||    
T  9035006 aaaatggaaagagaaaaacgagttagagggatgattttgagtcaaaaattgatcataaatcacccctc 9035073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 10 - 165
Target Start/End: Original strand, 22397512 - 22397667
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    ||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||| ||||| || || ||||| |||||| |||||||| ||| |||||    
T  22397512 gtcgcacaaagacgacgaacaaaacaacgtcgcactaagacgacgaaatcacaaaagaaaaaccgaaatagatgtgaaaattacttattttaat-aaagg 22397610  T
Q  110 gaaatag-aaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
     |||||| ||||||||||||||  | ||||||| | ||||| |||| ||||||||||    
T  22397611 aaaatagaaaaaacgagttagattgatgattttcgatcaaatattgaccctaaatca 22397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 34866572 - 34866446
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaat 114  Q
    ||||||||||||||||||  |||||||||| ||  |||||||||||| ||| |||||||| || ||||  |||| || |||||||||||||||| ||||     
T  34866572 acaaagacgacgaacaaaataacgtcgcactaagacgacgaaatcacgaaagaaaaaacgaaatagatatgaaactcgcttatttcaataaaagagaaag 34866473  T
Q  115 agaaaaacgagttagagaggtgatttt 141  Q
    ||||||||||||||||||  |||||||    
T  34866472 agaaaaacgagttagagacatgatttt 34866446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 6647879 - 6648038
Alignment:
Q  12 cgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaa-tcacttatttcaataaaaggg 110  Q
    ||||||||||||||||| |   || |||||||| ||  |||||||||||| ||| |||||||| || | |||  |||| |||||||||||||||||||||    
T  6647879 cgcacaaagacgacgaatagcacatcgtcgcactaagacgacgaaatcacgaaagaaaaaacgaaata-atgtaaaaaatcacttatttcaataaaaggg 6647977  T
Q  111 aaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    |||  ||||||||||||||||  ||||||||||||||||| ||| || |||||| ||||||    
T  6647978 aaagcgaaaaacgagttagaggagtgattttgggtcaaaatttgaccataaatcgcccctc 6648038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 28500823 - 28500736
Alignment:
Q  54 gaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgatttt 141  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||  ||||||||    
T  28500823 gaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaagagaaaaaagagttaaaggagtgatttt 28500736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 41988258 - 41988173
Alignment:
Q  86 aaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| || |||||||  ||||||||||  |||||||||||||||    
T  41988258 aaaatcacttatttcaacaaaagggaaagagaaaaacgagttagaggggcgattttgaatcaaaaattgatcctaaatcacccctc 41988173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 40565117 - 40565280
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||||||| |||||| ||  ||||||| ||  ||||||||||||||||  |||| |  |    ||| ||||||||||||||| |||| ||    
T  40565117 acgtcgcacaaagacgacaaacaaaacatggtcgcactaagacgacgaaatcacaaaaggaaaacctaattcaatgtgaaaatcacttatttaaatagaa 40565216  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
     ||||  |||||||||| ||||||||||||||| |||||||||||   ||||||| ||||||||    
T  40565217 aggaaggagaaaaacgatttagagaggtgatttggggtcaaaaatcaaccctaaaccacccctc 40565280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 34844026 - 34843933
Alignment:
Q  50 cgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgg 143  Q
    |||| ||||||||||| |||||||  || ||||| ||||||| |||||||||||||||||||||||| ||||   |||||||||||||||||||    
T  34844026 cgacaaaatcacaaaagaaaaaacaaaatagatgtgaaaatcgcttatttcaataaaagggaaataggaaaataggttagagaggtgattttgg 34843933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 28423774 - 28423903
Alignment:
Q  17 aaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatag 116  Q
    |||||||||||||||| ||| ||| || ||   ||||||||||||||||||||||||| || ||||   ||||||| |||||||||||||||||||        
T  28423774 aaagacgacgaacaaaccaatgtcacaagatgacgacgaaatcacaaaataaaaaacgaaatagatataaaaatcatttatttcaataaaagggaa---- 28423869  T
Q  117 aaaaacgagttagagaggtgattttgggtcaaaa 150  Q
    | | |||||||||| | |||||||||||||||||    
T  28423870 agatacgagttagataagtgattttgggtcaaaa 28423903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 13079295 - 13079141
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaat-------cacttatttcaa 102  Q
    ||||||||||||||||||| ||| |||||| |||| ||  |||||||||||| ||| |||||| | || ||||| ||||||       ||||||||||||    
T  13079295 gtcgcacaaagacgacgaataaaacaacgttgcactaagacgacgaaatcacgaaagaaaaaaagaaatagatgtgaaaattgaaaatcacttatttcaa 13079196  T
Q  103 taaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccct 159  Q
    ||||||||||| ||||||||||| |   | |||||||||||||||||| ||| ||||    
T  13079195 taaaagggaaagagaaaaacgaggt--tggggtgattttgggtcaaaatttgaccct 13079141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 34874007 - 34873848
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    |||||||| |||||| ||| |||| |||||  ||  |||||||||||| ||| |||| | | || |||||   || ||||||||||||||||||||||||    
T  34874007 cacaaagatgacgaataaaacaacatcgcattaagacgacgaaatcacgaaagaaaagatgaaatagatgtataactcacttatttcaataaaagggaaa 34873908  T
Q  114 tagaaaaacgagttagagaggtgattttgggt-caaaaattgtccctaaatcacccctcc 172  Q
      |||||||||||||||  ||||||||| | |  |||||||| |||||||||||||||||    
T  34873907 ctgaaaaacgagttagaagggtgattttcgataaaaaaattgaccctaaatcacccctcc 34873848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 6074700 - 6074857
Alignment:
Q  10 gtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagg 109  Q
    |||||||||||||||| |||||| ||  || |||| ||  ||||||||||||| || ||||| |  |   |||| ||||||||||||||| |||||||||    
T  6074700 gtcgcacaaagacgacaaacaaaacagtgttgcactaagacgacgaaatcacagaagaaaaacctaattcgatgtgaaaatcacttatttaaataaaagg 6074799  T
Q  110 gaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    |||  |||||||||| |||||| |||||||| ||| |||| |||| ||||||| |||||    
T  6074800 gaaggagaaaaacgatttagag-ggtgatttaggggcaaagattgaccctaaaccaccc 6074857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 13007844 - 13007688
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatg-------cgaaaatcacttatttc 100  Q
    ||||||||||||||||||||| ||| |||||| |||| ||  |||||||||||| ||| |||||| | || |||||        ||||||||||||||||    
T  13007844 acgtcgcacaaagacgacgaataaaacaacgttgcactaagacgacgaaatcacgaaagaaaaaaagaaatagatgtgaaaattgaaaatcacttatttc 13007745  T
Q  101 aataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccct 159  Q
    ||||||||||||| |||||||| || |   | |||||||||||||||||| ||| ||||    
T  13007744 aataaaagggaaagagaaaaacaaggt--tggggtgattttgggtcaaaatttgaccct 13007688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 13080299 - 13080154
Alignment:
Q  14 cacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaat-------cacttatttcaataaa 106  Q
    ||||||||||||||| ||| |||||| |||| ||  |||||||||||| ||| |||||| | || ||||| ||||||       ||||||||||||||||    
T  13080299 cacaaagacgacgaataaaacaacgttgcactaagacgacgaaatcacgaaagaaaaaaagaaatagatgtgaaaattgaaaatcacttatttcaataaa 13080200  T
Q  107 agggaaatagaaaaacgagttagagaggtgattttgggtcaaaaatt 153  Q
    ||| ||| |||||||| || | | | |||||||||||||||||||||    
T  13080199 aggaaaagagaaaaacaaggttg-ggggtgattttgggtcaaaaatt 13080154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 20270866 - 20270802
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaa 72  Q
    ||||||||||||||||||||||||| ||||||||||| ||  |||||||||||||| | ||||||    
T  20270866 acgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacgacgaaatcacaacaaaaaaaa 20270802  T

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Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 29154335 - 29154264
Alignment:
Q  79 agatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaa 151  Q
    ||||| |||||||||||||||||||||||| |||| | |||||| |||||||| |||||||||| ||||||||    
T  29154335 agatgtgaaaatcacttatttcaataaaagagaaaga-aaaaacaagttagaggggtgattttgagtcaaaaa 29154264  T

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Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 35906423 - 35906344
Alignment:
Q  34 caacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaa 113  Q
    ||||||||||| ||  ||||||||| ||||||||||||||  ||  || | |||||||||||||||||||||||||||||    
T  35906423 caacgtcgcacaaagacgacgaaattacaaaataaaaaacaaaattgacgtgaaaatcacttatttcaataaaagggaaa 35906344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 14910697 - 14910739
Alignment:
Q  79 agatgcgaaaatcacttatttcaataaaagggaaatagaaaaa 121  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  14910697 agatgtgaaaatcacttatttcaataaaagggaaatagaaaaa 14910739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 40774907 - 40774812
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcac--aaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaa 106  Q
    |||||||||||||| ||||| ||||||||||| ||  |||| |||||||  |||| |||||||  |  ||||  ||||||||||||||||||||||    
T  40774907 gcacaaagacgacggacaaaacaacgtcgcactaagacgacaaaatcacgaaaaaaaaaaaacaaagtagatatgaaaatcacttatttcaataaa 40774812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 24288895 - 24288949
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaa 69  Q
    ||||||||||||||||||||||| | |||| ||| |||  |||||||||||||||    
T  24288895 acaaagacgacgaacaaatcaacattgcactaaaacgaaaaaatcacaaaataaa 24288949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 24373327 - 24373273
Alignment:
Q  15 acaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaa 69  Q
    ||||||||||||||||||||||| | |||| ||| |||  |||||||||||||||    
T  24373327 acaaagacgacgaacaaatcaacattgcactaaaacgaaaaaatcacaaaataaa 24373273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 24288990 - 24289023
Alignment:
Q  134 gtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||||||||||||||||||||||| |||||||||    
T  24288990 gtgattttgggtcaaaaattgtccataaatcacc 24289023  T

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Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 24373232 - 24373199
Alignment:
Q  134 gtgattttgggtcaaaaattgtccctaaatcacc 167  Q
    |||||||||||||||||||||||| |||||||||    
T  24373232 gtgattttgggtcaaaaattgtccataaatcacc 24373199  T

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Target: scaffold0722 (Bit Score: 111; Significance: 2e-55; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 5488 - 5654
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  5488 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacataacagatgtgaaaatcacttatttcaataaaa 5587  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctccga 174  Q
    | ||||||||||||||||||| || ||  |||||| ||||||||||| |||||||| ||| ||||||    
T  5588 gagaaatagaaaaacgagttaaaggggcaattttgagtcaaaaattgaccctaaataacctctccga 5654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 106; Significance: 2e-52; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 12165 - 12318
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| || || || |||||||||||||||||||||||    
T  12165 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaacgaaataggtgtgaaaatcacttatttcaataaaa 12264  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaa 161  Q
    |||||| |||| |||||| ||||||| |||||||||||||||||||| ||||||    
T  12265 gggaaagagaagaacgagctagagagatgattttgggtcaaaaattgaccctaa 12318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 36681 - 36541
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||   || ||||| |||||||||||||||||||||||    
T  36681 acgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcacaaaataaaaaataaaatagatgtgaaaatcacttatttcaataaaa 36582  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaa 148  Q
    ||||||  |||||||||||||||  ||||||||| ||||||    
T  36581 gggaaaaggaaaaacgagttagaagggtgattttaggtcaa 36541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 83; Significance: 9e-39; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 244788 - 244623
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||||||||||| ||| ||||||||||  |||| |||||||||| ||||||||| || ||||| |||||||||||||||||||||||    
T  244788 acgtcgcacaaagacgacgaacaaaccaaggtcgcacgaagacgacaaaatcacaaactaaaaaacgaaatagatgtgaaaatcacttatttcaataaaa 244689  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggt--caaaaattgtccctaaatcacccctc 171  Q
     | ||| ||||||||||||||||| ||||||||  |||   |||||||| |||||||||| |||||    
T  244688 agaaaagagaaaaacgagttagaggggtgatttatggtaaaaaaaattgaccctaaatcaaccctc 244623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 1106 - 1225
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaaggg 110  Q
    ||||||||| |||||||||||| ||||||||||| ||  ||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||    
T  1106 tcgcacaaatacgacgaacaaaccaacgtcgcactaagacgacgaaatcacaaaataaaaaacaaaatagatgtgaaaatcacttatttcaataaaaggg 1205  T
Q  111 aaatagaaaaacgagttaga 130  Q
    ||| ||||||||||||||||    
T  1206 aaagagaaaaacgagttaga 1225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 171
Target Start/End: Original strand, 9620 - 9773
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||||||||| |||||||||  |||||||| |||||  ||||||||||||||         || || ||||| |||||||||||| ||||||||||    
T  9620 acgtcgcacaaagaagacgaacaac-caacgtcgtacgaagacgacgaaatcacaa---------cgaaatagatgtgaaaatcacttaattcaataaaa 9709  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcacccctc 171  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||    
T  9710 gggaaatagaaaaacgagttagaggagtgattttgggtcaaaaattgaccctaaatcatccctc 9773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 11166 - 11011
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    ||||||||||||||||||  | || || || ||||||||||||||||||||| |    
T  11166 acgtcgcataaagacggcgaacaaaccaacgtcgcacgaaac----gaaatcacaaaataaaaacag-aatagctgtgaaaatcacttatttcaataaga 11072  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatcaccc 168  Q
    |||||| ||||||| ||||||||| |||||||||  ||||||||||| ||| |||||||||    
T  11071 gggaaaaagaaaaatgagttagaggggtgattttaagtcaaaaattgacccaaaatcaccc 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 11740 - 11896
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||| ||||   |||| |||| |||||| ||  ||| |||||||| ||| ||||| || || ||||| |||||||||||||||||||||||    
T  11740 acgtcgcacaaagtcgacaggcaaaacaacttcgcactaagacgatgaaatcacgaaagaaaaa-cgaaatagatgtgaaaatcacttatttcaataaaa 11838  T
Q  108 gggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattgtccctaaatca 165  Q
    |||||||||||||||||||||||   ||||||||||||||||||||| | ||||||||    
T  11839 gggaaatagaaaaacgagttagatgagtgattttgggtcaaaaattgacactaaatca 11896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 137020 - 137133
Alignment:
Q  8 acgtcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaa 107  Q
    ||||||||||||||||| ||||||| |||||||| || ||  |||||||||||||||| |||||||| || |||||  |||||||||||||||| |||||    
T  137020 acgtcgcacaaagacgatgaacaaaacaacgtcgtactaagacgacgaaatcacaaaagaaaaaacgaaatagatgttaaaatcacttatttcattaaaa 137119  T
Q  108 gggaaatagaaaaa 121  Q
    ||||||||||||||    
T  137120 gggaaatagaaaaa 137133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 889 - 774
Alignment:
Q  51 gacgaaatcacaaaataaaaaacgtaacagatgcgaaaatcacttatttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaa 150  Q
    |||||||||||  || |||||||| || ||||| ||||  ||||||||||||||||||||||| || |||||||||||||| | ||||||| ||||||||    
T  889 gacgaaatcacggaagaaaaaacgaaatagatgtgaaagccacttatttcaataaaagggaaagaggaaaacgagttagagtgatgatttttggtcaaaa 790  T
Q  151 attgtccctaaatcac 166  Q
    |||| || ||||||||    
T  789 attgaccttaaatcac 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 10376 - 10433
Alignment:
Q  97 tttcaataaaagggaaatagaaaaacgagttagagaggtgattttgggtcaaaaattg 154  Q
    ||||||||||||||||| |||||||| |||||||  |||| |||||||||||||||||    
T  10376 tttcaataaaagggaaagagaaaaacaagttagaagggtggttttgggtcaaaaattg 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 10278 - 10338
Alignment:
Q  13 gcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaac 73  Q
    |||||||||||||||||||| ||||||||||| ||  | || |||||||||||||||||||    
T  10278 gcacaaagacgacgaacaaaccaacgtcgcactaagacaaccaaatcacaaaataaaaaac 10338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 1092 - 1154
Alignment:
Q  11 tcgcacaaagacgacgaacaaatcaacgtcgcacgaaaccgacgaaatcacaaaataaaaaac 73  Q
    ||||| |||||| ||||||||| ||||||| ||||||   |||||||||||||||||||||||    
T  1092 tcgcaaaaagacaacgaacaaaccaacgtcacacgaagatgacgaaatcacaaaataaaaaac 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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