View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2800_high_2 (Length: 421)

Name: NF2800_high_2
Description: NF2800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2800_high_2
NF2800_high_2
[»] chr3 (43 HSPs)
chr3 (1-334)||(36868187-36868520)
chr3 (1-110)||(36851686-36851794)
chr3 (345-413)||(36868558-36868626)
chr3 (1-122)||(37371192-37371312)
chr3 (1-122)||(36862138-36862258)
chr3 (249-317)||(50960844-50960912)
chr3 (207-317)||(21200553-21200661)
chr3 (250-317)||(49503766-49503833)
chr3 (251-413)||(49841529-49841688)
chr3 (249-334)||(39600892-39600973)
chr3 (249-317)||(54128381-54128449)
chr3 (249-409)||(19736918-19737068)
chr3 (249-317)||(52138803-52138871)
chr3 (249-304)||(39235154-39235209)
chr3 (251-334)||(3987037-3987116)
chr3 (243-317)||(26490318-26490392)
chr3 (261-318)||(29817506-29817563)
chr3 (252-317)||(41842725-41842790)
chr3 (249-401)||(19757829-19757971)
chr3 (357-413)||(27917490-27917546)
chr3 (353-409)||(29919226-29919282)
chr3 (353-409)||(29928586-29928642)
chr3 (353-409)||(29968379-29968435)
chr3 (353-409)||(29977740-29977796)
chr3 (249-317)||(38430851-38430919)
chr3 (249-316)||(42510227-42510292)
chr3 (249-317)||(43694976-43695044)
chr3 (250-317)||(5168835-5168902)
chr3 (250-334)||(36820173-36820253)
chr3 (375-410)||(44395346-44395381)
chr3 (254-305)||(45289307-45289358)
chr3 (250-317)||(47233808-47233875)
chr3 (375-413)||(46568034-46568072)
chr3 (252-298)||(48734349-48734395)
chr3 (255-334)||(54365194-54365268)
chr3 (356-409)||(40562520-40562573)
chr3 (252-317)||(51447924-51447989)
chr3 (357-409)||(26490239-26490291)
chr3 (269-334)||(34719303-34719364)
chr3 (353-413)||(36820263-36820323)
chr3 (249-317)||(38060434-38060502)
chr3 (353-409)||(45236778-45236834)
chr3 (353-413)||(45728064-45728124)
[»] chr7 (62 HSPs)
chr7 (1-119)||(17615648-17615765)
chr7 (251-409)||(47848596-47848743)
chr7 (250-317)||(12966025-12966092)
chr7 (254-314)||(7189442-7189502)
chr7 (253-317)||(42187473-42187537)
chr7 (255-317)||(38920797-38920859)
chr7 (251-317)||(40169652-40169718)
chr7 (242-304)||(41948532-41948594)
chr7 (252-334)||(27021906-27021984)
chr7 (252-317)||(28020967-28021032)
chr7 (249-334)||(19262644-19262725)
chr7 (353-413)||(30200263-30200323)
chr7 (249-317)||(36101976-36102044)
chr7 (241-334)||(36514410-36514499)
chr7 (250-317)||(12841487-12841554)
chr7 (250-317)||(13859220-13859287)
chr7 (250-317)||(34869423-34869490)
chr7 (250-317)||(35906413-35906480)
chr7 (250-317)||(49029279-49029346)
chr7 (375-413)||(5335840-5335878)
chr7 (252-317)||(2885936-2886001)
chr7 (250-299)||(24549905-24549954)
chr7 (251-296)||(35713719-35713764)
chr7 (251-295)||(6420703-6420747)
chr7 (249-313)||(7273046-7273110)
chr7 (249-317)||(28628144-28628212)
chr7 (249-313)||(30200174-30200238)
chr7 (250-413)||(31005141-31005293)
chr7 (250-317)||(6374871-6374938)
chr7 (251-314)||(7220750-7220813)
chr7 (250-317)||(11593963-11594030)
chr7 (250-317)||(22349623-22349690)
chr7 (250-317)||(33072955-33073022)
chr7 (250-317)||(39906582-39906649)
chr7 (250-317)||(43281677-43281744)
chr7 (250-317)||(45836692-45836759)
chr7 (222-317)||(46989906-46990001)
chr7 (375-413)||(14593679-14593717)
chr7 (375-413)||(16013202-16013240)
chr7 (251-317)||(18605359-18605425)
chr7 (251-317)||(18637565-18637631)
chr7 (251-317)||(18650999-18651065)
chr7 (375-413)||(24550013-24550051)
chr7 (251-317)||(25579290-25579356)
chr7 (375-413)||(36514531-36514569)
chr7 (375-413)||(36869615-36869653)
chr7 (354-412)||(40139221-40139279)
chr7 (251-317)||(43282411-43282477)
chr7 (250-312)||(44855384-44855446)
chr7 (251-317)||(46356069-46356135)
chr7 (250-413)||(37617862-37618015)
chr7 (250-299)||(38135424-38135473)
chr7 (215-296)||(48202879-48202960)
chr7 (353-406)||(48736203-48736256)
chr7 (353-413)||(1740715-1740775)
chr7 (241-317)||(5335923-5335999)
chr7 (241-313)||(14593772-14593844)
chr7 (269-317)||(26742127-26742175)
chr7 (250-314)||(33350018-33350082)
chr7 (249-317)||(36136767-36136835)
chr7 (249-317)||(40830226-40830294)
chr7 (353-409)||(42187393-42187448)
[»] chr4 (46 HSPs)
chr4 (249-316)||(29398822-29398889)
chr4 (251-410)||(54470128-54470276)
chr4 (252-317)||(31459033-31459098)
chr4 (241-310)||(42285903-42285972)
chr4 (242-315)||(46715576-46715649)
chr4 (241-317)||(35555850-35555926)
chr4 (241-334)||(51252664-51252753)
chr4 (251-313)||(50662394-50662457)
chr4 (251-317)||(28236186-28236252)
chr4 (250-413)||(43433836-43433994)
chr4 (241-314)||(42639223-42639296)
chr4 (249-305)||(47611742-47611798)
chr4 (222-317)||(31339540-31339634)
chr4 (250-317)||(31960026-31960093)
chr4 (250-317)||(52569727-52569794)
chr4 (250-317)||(53707797-53707864)
chr4 (241-315)||(38570950-38571024)
chr4 (251-400)||(44360014-44360155)
chr4 (251-304)||(30853373-30853426)
chr4 (249-317)||(436232-436300)
chr4 (353-409)||(20105775-20105831)
chr4 (249-413)||(31403229-31403384)
chr4 (241-313)||(33709931-33710003)
chr4 (269-317)||(38266149-38266197)
chr4 (249-317)||(41192839-41192907)
chr4 (252-304)||(44860862-44860914)
chr4 (353-413)||(49987346-49987406)
chr4 (261-313)||(49987435-49987487)
chr4 (249-305)||(50471541-50471597)
chr4 (250-317)||(33227212-33227279)
chr4 (250-317)||(48622755-48622822)
chr4 (251-317)||(1793463-1793529)
chr4 (251-317)||(20591513-20591579)
chr4 (251-317)||(28497493-28497558)
chr4 (375-413)||(44860772-44860810)
chr4 (250-315)||(4440858-4440923)
chr4 (252-317)||(30621418-30621483)
chr4 (252-317)||(37797855-37797920)
chr4 (375-408)||(40933222-40933255)
chr4 (249-317)||(10209037-10209105)
chr4 (242-282)||(13805469-13805509)
chr4 (261-317)||(42293472-42293528)
chr4 (140-200)||(44641936-44641996)
chr4 (140-184)||(44686700-44686744)
chr4 (357-409)||(45205156-45205208)
chr4 (357-413)||(56375208-56375264)
[»] scaffold0018 (2 HSPs)
scaffold0018 (248-317)||(44078-44147)
scaffold0018 (250-317)||(31471-31538)
[»] chr1 (37 HSPs)
chr1 (249-317)||(5338727-5338795)
chr1 (250-413)||(9509236-9509388)
chr1 (249-317)||(27848016-27848084)
chr1 (251-317)||(48431619-48431685)
chr1 (249-317)||(35828761-35828829)
chr1 (250-317)||(34792561-34792628)
chr1 (252-409)||(4379927-4380081)
chr1 (264-413)||(9599620-9599758)
chr1 (251-313)||(43423726-43423788)
chr1 (256-317)||(14226047-14226108)
chr1 (252-317)||(40416374-40416439)
chr1 (249-317)||(1661433-1661501)
chr1 (249-317)||(2544602-2544670)
chr1 (241-317)||(3819059-3819135)
chr1 (353-413)||(52442808-52442868)
chr1 (250-317)||(1210748-1210815)
chr1 (242-305)||(8343062-8343125)
chr1 (254-317)||(38868885-38868948)
chr1 (250-317)||(51602059-51602126)
chr1 (249-315)||(13827928-13827994)
chr1 (252-317)||(8671921-8671986)
chr1 (249-313)||(32404737-32404801)
chr1 (353-409)||(34827406-34827462)
chr1 (250-317)||(15085937-15086004)
chr1 (250-317)||(22090099-22090166)
chr1 (242-317)||(23791848-23791923)
chr1 (350-413)||(26016355-26016418)
chr1 (250-317)||(39140523-39140590)
chr1 (250-313)||(51440977-51441040)
chr1 (249-299)||(10569278-10569328)
chr1 (251-317)||(32231167-32231233)
chr1 (249-318)||(36340014-36340083)
chr1 (353-413)||(1661344-1661404)
chr1 (249-305)||(16822233-16822289)
chr1 (255-299)||(17815493-17815537)
chr1 (249-317)||(19908250-19908318)
chr1 (254-310)||(51812535-51812591)
[»] chr8 (31 HSPs)
chr8 (222-317)||(29700279-29700374)
chr8 (253-317)||(9695634-9695698)
chr8 (251-305)||(35643814-35643868)
chr8 (254-315)||(13171865-13171926)
chr8 (252-317)||(45512709-45512774)
chr8 (250-317)||(12491350-12491417)
chr8 (251-317)||(18474173-18474239)
chr8 (251-305)||(41971991-41972045)
chr8 (249-282)||(79081-79114)
chr8 (250-413)||(36545065-36545219)
chr8 (242-318)||(12611537-12611613)
chr8 (253-305)||(16917199-16917251)
chr8 (373-413)||(30456535-30456575)
chr8 (249-305)||(30748472-30748528)
chr8 (261-317)||(41444549-41444605)
chr8 (249-317)||(45419240-45419308)
chr8 (250-317)||(2776441-2776508)
chr8 (353-408)||(28300416-28300471)
chr8 (354-413)||(36143287-36143346)
chr8 (254-317)||(36565457-36565520)
chr8 (140-182)||(16917293-16917335)
chr8 (243-334)||(32043580-32043667)
chr8 (354-404)||(36069570-36069620)
chr8 (379-413)||(39760754-39760788)
chr8 (249-317)||(36395160-36395229)
chr8 (252-317)||(40813327-40813392)
chr8 (249-317)||(43904876-43904947)
chr8 (249-305)||(17491832-17491888)
chr8 (249-317)||(36143368-36143436)
chr8 (249-317)||(39946860-39946928)
chr8 (249-317)||(44681250-44681318)
[»] chr5 (32 HSPs)
chr5 (242-317)||(33667219-33667294)
chr5 (250-317)||(31636132-31636199)
chr5 (247-317)||(28676598-28676668)
chr5 (207-305)||(42199301-42199399)
chr5 (251-317)||(43558040-43558106)
chr5 (251-413)||(1287792-1287953)
chr5 (249-317)||(43475243-43475311)
chr5 (250-317)||(4496387-4496454)
chr5 (353-408)||(21952274-21952329)
chr5 (249-317)||(41833793-41833863)
chr5 (252-317)||(1275267-1275332)
chr5 (252-334)||(15489706-15489784)
chr5 (249-317)||(18351118-18351187)
chr5 (241-317)||(2712947-2713023)
chr5 (249-317)||(34273030-34273098)
chr5 (250-317)||(14665717-14665784)
chr5 (250-317)||(16347590-16347657)
chr5 (250-317)||(24178513-24178580)
chr5 (250-317)||(28977071-28977138)
chr5 (250-317)||(38684970-38685037)
chr5 (267-317)||(14667766-14667816)
chr5 (138-199)||(3775195-3775256)
chr5 (242-299)||(6889014-6889071)
chr5 (353-390)||(8492627-8492664)
chr5 (241-318)||(14749309-14749386)
chr5 (269-317)||(27896-27944)
chr5 (249-317)||(79516-79584)
chr5 (241-317)||(6859384-6859460)
chr5 (250-310)||(12492596-12492656)
chr5 (256-308)||(21193858-21193910)
chr5 (375-411)||(27998343-27998379)
chr5 (251-299)||(38578734-38578782)
[»] chr2 (29 HSPs)
chr2 (243-413)||(8180698-8180857)
chr2 (251-309)||(13240958-13241016)
chr2 (249-317)||(12141547-12141615)
chr2 (261-317)||(19024183-19024239)
chr2 (250-317)||(43238305-43238372)
chr2 (243-317)||(25834684-25834758)
chr2 (268-317)||(18958910-18958959)
chr2 (241-290)||(42543265-42543314)
chr2 (353-413)||(7825276-7825336)
chr2 (353-405)||(9556672-9556724)
chr2 (353-413)||(9647909-9647969)
chr2 (249-334)||(43752158-43752239)
chr2 (250-317)||(11992320-11992387)
chr2 (250-317)||(36183454-36183521)
chr2 (251-317)||(38434954-38435021)
chr2 (250-317)||(38452897-38452964)
chr2 (250-317)||(45367837-45367904)
chr2 (251-317)||(2610591-2610657)
chr2 (249-299)||(3481162-3481212)
chr2 (251-312)||(14197375-14197437)
chr2 (251-296)||(9556582-9556627)
chr2 (264-317)||(11412724-11412777)
chr2 (249-297)||(12026216-12026264)
chr2 (353-409)||(12734623-12734679)
chr2 (353-404)||(37393470-37393522)
chr2 (249-313)||(41763253-41763317)
chr2 (353-413)||(41779610-41779670)
chr2 (353-413)||(42092437-42092497)
chr2 (353-409)||(45077670-45077726)
[»] chr6 (18 HSPs)
chr6 (249-317)||(33084061-33084129)
chr6 (251-409)||(9593919-9594072)
chr6 (249-317)||(14389379-14389446)
chr6 (146-200)||(21870201-21870255)
chr6 (138-200)||(31818623-31818685)
chr6 (261-297)||(33997765-33997801)
chr6 (250-317)||(5258360-5258427)
chr6 (358-413)||(6293678-6293733)
chr6 (249-312)||(24665818-24665881)
chr6 (250-317)||(28085379-28085446)
chr6 (376-410)||(5129164-5129198)
chr6 (375-413)||(32755837-32755875)
chr6 (252-317)||(2079343-2079408)
chr6 (256-305)||(4948529-4948578)
chr6 (256-305)||(4955500-4955549)
chr6 (261-317)||(8364575-8364631)
chr6 (377-409)||(26291700-26291732)
chr6 (353-413)||(33998308-33998368)
[»] scaffold0325 (1 HSPs)
scaffold0325 (252-316)||(11802-11866)
[»] scaffold0570 (1 HSPs)
scaffold0570 (250-317)||(1160-1227)


Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 36868187 - 36868520
Alignment:
Q  1 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36868187 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 36868286  T
Q  101 gacttgattaacttgttttatttaaccaaaaccaagccttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36868287 gacttgattaacttgttttatttaaccaaaaccaagccttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 36868386  T
Q  201 attttaactactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  36868387 attttaactactgtccatattatctactatccttacggctgaatccaaaggtcttctttatatatgcccaaaccacctaagcctactttccaccatcttc 36868486  T
Q  301 tctaccataggtgctacataccccaactctctct 334  Q
    ||||||||||||||||||||||||||||||||||    
T  36868487 tctaccataggtgctacataccccaactctctct 36868520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36851686 - 36851794
Alignment:
Q  1 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 100  Q
    ||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||| ||| |||||| ||||||| ||||||||||||||||||| |||    
T  36851686 aacaaagaggaactccttgccatggcaaagggacatcaactcaagaaaggtttgctt-cttgatgatcgaaatcacaatttgtggagattttgcatgctt 36851784  T
Q  101 gacttgatta 110  Q
    ||||||||||    
T  36851785 gacttgatta 36851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 36868558 - 36868626
Alignment:
Q  345 atgatattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36868558 atgatattatttctaatcatatctcgcctggtcttaccacaaattcaacacaacatcctcatctctgct 36868626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37371312 - 37371192
Alignment:
Q  1 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 100  Q
    ||||||||||||||| ||||||||||||||||| || || |||| |||||||||||| ||||||||||||||| ||  |||||| ||||||||||| |||    
T  37371312 aacaaagaggaactccttgccatggcaaagggaaatcaagtcaagaaaggtttgctt-cttaatgatctaaattacagtttgtgtagattttgcatgctt 37371214  T
Q  101 gacttgattaacttgttttatt 122  Q
    || ||| |||  ||||||||||    
T  37371213 gaattggttactttgttttatt 37371192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 36862138 - 36862258
Alignment:
Q  1 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 100  Q
    |||||||||||||||  |||||||| |||| ||||| ||||||| |||||||||||| ||| |||||||||||||| ||  ||||| | | ||||| |||    
T  36862138 aacaaagaggaactccgtgccatgggaaagcgagatcaactcaagaaaggtttgctt-ctttatgatctaaatcacaatgcgtggacactatgcatgctt 36862236  T
Q  101 gacttgattaacttgttttatt 122  Q
    ||||||||||  ||||||||||    
T  36862237 gacttgattactttgttttatt 36862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 50960844 - 50960912
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  50960844 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 50960912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 21200661 - 21200553
Alignment:
Q  207 actactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctacc 306  Q
    |||||| ||||| | ||||||| ||||||| || ||||| | | ||||||||| |||||||||||||||||||||  || ||||||||||||| |||||     
T  21200661 actactctccatgtgatctactctccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac- 21200563  T
Q  307 ataggtgctac 317  Q
     ||||||||||    
T  21200562 -taggtgctac 21200553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 49503766 - 49503833
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  49503766 ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 49503833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 413
Target Start/End: Complemental strand, 49841688 - 49841529
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac--ataccccaactctctctgctcctcctcatga 348  Q
    ||||||||| |||| ||||||||||||| ||  || ||||||||||||| ||||  |||||||||||   ||||||||||||||||       || |||     
T  49841688 gtcttctctctacacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgctacggctaccccaactctctct-----cactaatgt 49841594  T
Q  349 tattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    | | |||||||||| || |||| || ||||||| |||||| ||||||||||||||||||| ||||    
T  49841593 tgtcatttctaatcttacctcgtctagtcttactacacatccaacacaacatcctcatctatgct 49841529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 39600892 - 39600973
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||||||||| |||||||| |||||||||||||||  ||||||||||||| ||||| |||||| ||||    |||||||||||||    
T  39600892 aggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactac----cccaactctctct 39600973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 54128449 - 54128381
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| ||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  54128449 aggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 54128381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 409
Target Start/End: Complemental strand, 19737068 - 19736918
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatga 348  Q
    ||||||||||| | ||||| |||||||||||| | || |||| |||||||| ||||| ||||||||| |   ||||||||||||||       || ||||    
T  19737068 aggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgc---ccccaactctctct-------ctaatga 19736979  T
Q  349 tattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    | | | |||||||| |||| || || |||||||||| ||| |||||||||||| |||||||    
T  19736978 tttcacttctaatcgtatcccgtctagtcttaccactcatccaacacaacatcatcatctc 19736918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 52138871 - 52138803
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  52138871 aggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 52138803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 39235209 - 39235154
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 304  Q
    ||||||||||| |||||||||||||||||||||| || |||| |||||||| ||||    
T  39235209 aggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 3987116 - 3987037
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||||||| ||||| |||||||||||||||  || |||| |||||||| ||||| |||||||    |||||||||||||||||    
T  3987116 gtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtg----ataccccaactctctct 3987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 26490392 - 26490318
Alignment:
Q  243 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||| |||||| | | |||||| ||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  26490392 atccaacggtcttttatctacatgtccaaaccacctaagcctattttctaccatcttttctactataggtgctac 26490318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 29817563 - 29817506
Alignment:
Q  261 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 318  Q
    |||||| ||||||||||||| ||||||||| || ||||| ||||| ||||||||||||    
T  29817563 tacatgtccaaaccacctaaacttactttctacaatcttttctactataggtgctaca 29817506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 41842725 - 41842790
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||| |||||||||||||||  |  ||||||||||||| ||||| |||||||||||    
T  41842725 tcttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtgctac 41842790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 401
Target Start/End: Complemental strand, 19757971 - 19757829
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatga 348  Q
    ||||||||||| | ||||| |||||||||||| | || |||| |||||||| ||||| ||||||||| |   ||||||||||||||       || ||||    
T  19757971 aggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctactataggtgctgc---ccccaactctctct-------ctaatga 19757882  T
Q  349 tattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatc 401  Q
    | | | |||||||| |||||||  | |||||||||| ||| ||||||||||||    
T  19757881 tttcacttctaatcgtatctcgtgtagtcttaccactcatccaacacaacatc 19757829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 27917546 - 27917490
Alignment:
Q  357 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||| |||||| || | |||||||| ||| ||||||||||||||||||||||||    
T  27917546 ctaatcaaatctcgtctaggcttaccactcatccaacacaacatcctcatctctgct 27917490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 29919282 - 29919226
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29919282 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29919226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 29928586 - 29928642
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29928586 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29928642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 29968435 - 29968379
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29968435 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29968379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 29977740 - 29977796
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||||||||||| ||  || |||||||||| |||||||||||| |||||||    
T  29977740 atttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctc 29977796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 38430919 - 38430851
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||| ||||| ||||||||||| | |||||||| || |||| |||||||| ||||| |||||||||||    
T  38430919 aggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgctac 38430851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 316
Target Start/End: Original strand, 42510227 - 42510292
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 316  Q
    ||||||||||||  |||| ||||||||||||||| || ||||||| ||||| ||||| ||||||||||    
T  42510227 aggtcttctcta--catgtccaaaccacctaagcctattttccactatcttttctactataggtgcta 42510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 43694976 - 43695044
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||||||||||||| ||||||  | |||| |||| ||| ||||| |||||||||||    
T  43694976 aggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactataggtgctac 43695044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 5168902 - 5168835
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||  ||||||| |||||| || |||| |||| ||| |||||||||||||||||    
T  5168902 ggtcttctctctacatgttcaaaccatctaagcgtattttctaccaacttttctaccataggtgctac 5168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 36820173 - 36820253
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    |||||||||| |||||| | ||||||||||||| || |||||||||||||  |||  |||||||||||    |||||||||||||    
T  36820173 ggtcttctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctac----cccaactctctct 36820253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 375 - 410
Target Start/End: Complemental strand, 44395381 - 44395346
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctct 410  Q
    |||||||||||||||||||||||| |||||||||||    
T  44395381 gtcttaccacacattcaacacaacttcctcatctct 44395346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 45289307 - 45289358
Alignment:
Q  254 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    |||||| ||| |||||||||||||||||| || ||||||||||||| |||||    
T  45289307 ttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctac 45289358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 47233808 - 47233875
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  47233808 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 47233875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Complemental strand, 46568072 - 46568034
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  46568072 gtcttaacacacatccaacacaacatcctcatctctgct 46568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 48734349 - 48734395
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatct 298  Q
    |||||||| |||||||||||||||||||||| || |||| |||||||    
T  48734349 tcttctctctacatgcccaaaccacctaagcctattttctaccatct 48734395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 334
Target Start/End: Original strand, 54365194 - 54365268
Alignment:
Q  255 tctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||| ||||||||||||||||||||||| | ||||| |||| || ||||| |||||||||||    |||||||||||||    
T  54365194 tctctctacatgcccaaaccacctaagct-attttccgccatattttctactataggtgctac----cccaactctctct 54365268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 409
Target Start/End: Original strand, 40562520 - 40562573
Alignment:
Q  356 tctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||| |||||| ||| || ||||||||||||||| ||||||||||| |||||||    
T  40562520 tctattcatatttcgtctagtcttaccacacatttaacacaacatcgtcatctc 40562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 51447924 - 51447989
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||||||||||| | |||||| || |||| |||| ||| ||||| |||||||||||    
T  51447924 tcttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctac 51447989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 26490291 - 26490239
Alignment:
Q  357 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    ||||||||||| || || |||||||||| ||| |||| |||||||||||||||    
T  26490291 ctaatcatatcccgtcttgtcttaccactcatccaacgcaacatcctcatctc 26490239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 34719303 - 34719364
Alignment:
Q  269 caaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    |||| |||||||| | ||||||||||||||| ||||| |||||||||||    |||||||||||||    
T  34719303 caaaacacctaagttgactttccaccatcttttctacgataggtgctac----cccaactctctct 34719364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 36820263 - 36820323
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| ||||||| || |||||||||||||| |||| ||||| ||| |||| ||||    
T  36820263 atttctaatcctatctcgtctagtcttaccacacatccaacgcaacaaccttatctttgct 36820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 38060502 - 38060434
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||  |||||||||||    
T  38060502 aggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctac 38060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 45236834 - 45236778
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||||||||  | || |||||||||||||| |||| ||||||||| |||||    
T  45236834 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 45236778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 45728124 - 45728064
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| ||| ||| || |||||||||| ||| || | |||||||||||||||||||    
T  45728124 atttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgct 45728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 17615765 - 17615648
Alignment:
Q  1 aacaaagaggaactcattgccatggcaaagggagattaactcaataaaggtttgcttccttaatgatctaaatcaccatttgtggagattttgcatcctt 100  Q
    ||||||||||||||| ||||||||| ||||||| || |  |||| |||||||||||| |||||||||||||||||| ||||||| ||||||| ||| |||    
T  17615765 aacaaagaggaactccttgccatggaaaagggaaatcatgtcaagaaaggtttgctt-cttaatgatctaaatcacaatttgtgtagatttttcatgctt 17615667  T
Q  101 gacttgattaacttgtttt 119  Q
    || ||| |||  |||||||    
T  17615666 gaattggttactttgtttt 17615648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 251 - 409
Target Start/End: Complemental strand, 47848743 - 47848596
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgata 350  Q
    |||||||||  ||||||||||||||||||||| || ||||||||||||| ||||| ||||| ||    ||||||||||||||||       || ||| ||    
T  47848743 gtcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgc----taccccaactctctct-------ctaatgtta 47848655  T
Q  351 ttatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    | | |||| ||| |||| || || |||||||||||||| ||||||||||||||||||||    
T  47848654 tcacttctgatcctatcccgtctagtcttaccacacatccaacacaacatcctcatctc 47848596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 12966092 - 12966025
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||| ||| | |||||||||||    
T  12966092 ggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgctac 12966025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 7189442 - 7189502
Alignment:
Q  254 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 314  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||    
T  7189442 ttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgc 7189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 42187537 - 42187473
Alignment:
Q  253 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| |||||||||||||||||||||| || ||||||||||||| ||||  |||||||||||    
T  42187537 cttctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctac 42187473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 38920859 - 38920797
Alignment:
Q  255 tctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||| |||||||||||||||| ||||| || ||||||||||||| ||||| |||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctac 38920797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 40169718 - 40169652
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||| ||| |||||||||||||||||||||| || ||||||||||||| ||||| ||| |||||||    
T  40169718 gtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactataagtgctac 40169652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 41948594 - 41948532
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 304  Q
    |||||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||||    
T  41948594 aatccagaggtcttctctctacatgcccaaaccacttaagcctagtttccaccatcttttcta 41948532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 27021906 - 27021984
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    |||||||| |||||||||||||||||||||| || ||| ||||| ||| ||||| |||||||||||    |||||||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctac----cccaactctctct 27021984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 28021032 - 28020967
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||| ||||| ||| |||||||    
T  28021032 tcttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctac 28020967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 19262644 - 19262725
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||||||||| ||||||| ||||||||||||||  | |||| |||||||| ||||| |||||||||||    |||||||||||||    
T  19262644 aggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaataggtgctac----cccaactctctct 19262725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 30200263 - 30200323
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||||||||||| |  ||  ||||||||||||| ||||||||||||||||||||||||    
T  30200263 atttctaatcatatcccatctaatcttaccacacatccaacacaacatcctcatctctgct 30200323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 36101976 - 36102044
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||| |||||||||||||||| || |||||| |||||| ||||  |||||||||||    
T  36101976 aggtcttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgctac 36102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 36514410 - 36514499
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||||| | ||| ||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    |||||||||||||    
T  36514410 gaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac----cccaactctctct 36514499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 12841487 - 12841554
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  12841487 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 12841554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 13859220 - 13859287
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  13859220 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 13859287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 34869490 - 34869423
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  34869490 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 34869423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 35906413 - 35906480
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  35906413 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 35906480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 49029346 - 49029279
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  49029346 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 49029279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 413
Target Start/End: Complemental strand, 5335878 - 5335840
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  5335878 gtcttaccacacattcaacgcaacatcctcatctctgct 5335840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 2885936 - 2886001
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  2885936 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 2886001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 24549905 - 24549954
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 299  Q
    |||||||||| |||||||||||||||||||||| || |||||| ||||||    
T  24549905 ggtcttctctctacatgcccaaaccacctaagcctagtttccatcatctt 24549954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 35713764 - 35713719
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccat 296  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||    
T  35713764 gtcttctctctacatgcccaaaccacctaagcctattttccaccat 35713719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 6420703 - 6420747
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccacca 295  Q
    ||||||||| |||||||||||||||||||||| || |||||||||    
T  6420703 gtcttctctctacatgcccaaaccacctaagcctagtttccacca 6420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 7273110 - 7273046
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  7273110 aggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 7273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 28628144 - 28628212
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||| |||||| ||||||||||||||||||||||  | ||||||||||| | |||||  ||||||||||    
T  28628144 aggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctactctaggtgctac 28628212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 30200174 - 30200238
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||||| | |||||||| ||| ||||||||| || ||||||||||||| ||||| |||||||    
T  30200174 aggtcttctatttacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtg 30200238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 413
Target Start/End: Complemental strand, 31005293 - 31005141
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgat 349  Q
    |||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| ||||||||    |||||| |||||||||       || ||| |    
T  31005293 ggtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgc----tacccccactctctct-------ctaatggt 31005205  T
Q  350 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
     ||||| |||||| ||||  | || |||||||||| ||| |||| |||||||||||||||||||    
T  31005204 gttattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgct 31005141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 6374938 - 6374871
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||| ||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  6374938 ggtcttctctctacatgctcaaaccatctaagcctattttctaccaacttttctactataggtgctac 6374871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 7220813 - 7220750
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 314  Q
    ||||||||| ||||||||||||||||||||||  | |||| | |||||| ||||| ||||||||    
T  7220813 gtcttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtgc 7220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 11594030 - 11593963
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  11594030 ggtcttctctctacatgcccaaaccatctaaccgtattttctaccaacttttctactataggtgctac 11593963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 22349690 - 22349623
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||| |||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  22349690 ggtcttctctctacatgccaaaaccatctaagcctattttctaccaacttttctactataggtgctac 22349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 33073022 - 33072955
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  33073022 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 33072955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 39906582 - 39906649
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  39906582 ggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 39906649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 43281744 - 43281677
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43281744 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43281677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 45836692 - 45836759
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  45836692 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 45836759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 46990001 - 46989906
Alignment:
Q  222 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||| ||  |||| | |||||| ||| | |||||||||||||||||||| | |  ||| |||||||| ||||| |||||||||||    
T  46990001 atctactatctttactgcgaaatctataggtctcctccacacatgcccaaaccacctaagatgaaattcaaccatcttttctacaataggtgctac 46989906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Complemental strand, 14593717 - 14593679
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  14593717 gtcttaccacacatccaacgcaacatcctcatctctgct 14593679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Complemental strand, 16013240 - 16013202
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  16013240 gtcttaccacacatccaacgcaacatcctcatctctgct 16013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 18605359 - 18605425
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18605359 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18605425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 18637631 - 18637565
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18637631 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18637565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 18651065 - 18650999
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| |||||||| | ||  |||||||||||    
T  18651065 gtcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgctac 18650999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 24550013 - 24550051
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  24550013 gtcttacaacacatccaacacaacatcctcatctctgct 24550051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 25579290 - 25579356
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||| |||||||||||||||| || |||||||||| || ||| | || ||||||||    
T  25579290 gtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgctatgggtgctac 25579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 36514531 - 36514569
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  36514531 gtcttaccacacatccaacgcaacatcctcatctctgct 36514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 36869615 - 36869653
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  36869615 gtcttaccactcatccaacacaacatcctcatctctgct 36869653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 40139221 - 40139279
Alignment:
Q  354 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgc 412  Q
    ||||||||| |||| || || |||||||||||||| | ||||||||||||| |||||||    
T  40139221 tttctaatcttatcccgtctagtcttaccacacatcccacacaacatcctcgtctctgc 40139279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 43282477 - 43282411
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| |||||||||||  ||||||||| || ||||||||  ||| ||||| |||||||||||    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctac 43282411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 44855384 - 44855446
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggt 312  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||||    
T  44855384 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggt 44855446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 46356069 - 46356135
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  46356069 gtcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 46356135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 413
Target Start/End: Complemental strand, 37618015 - 37617862
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttcc-accatcttctctaccataggtgctacataccccaactctctctgctcctcctcatga 348  Q
    |||||||||| ||||||||||||||| |||||| || ||| | |||| ||| ||||| |||||||||||    ||| |||||||||       || |||     
T  37618015 ggtcttctctctacatgcccaaaccatctaagcctatttttctaccaacttttctactataggtgctac----ccccactctctct-------ctaatgg 37617927  T
Q  349 tattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    | | ||| |||||| ||||| | || |||||||||| ||| |||| |||||||||||||||||||    
T  37617926 tgtcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 37617862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 38135424 - 38135473
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 299  Q
    |||||||| | |||||| ||||||||||||||| || |||||||||||||    
T  38135424 ggtcttctgtctacatgtccaaaccacctaagcctattttccaccatctt 38135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 296
Target Start/End: Original strand, 48202879 - 48202960
Alignment:
Q  215 ccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccat 296  Q
    |||||| ||||||| |||||||  | ||||| | | ||||||||| ||||||| |||||||||||||| ||  |||||||||    
T  48202879 ccatatgatctactctccttactacagaatctacaagtcttctctctacatgcgcaaaccacctaagcctagattccaccat 48202960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 48736203 - 48736256
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcat 406  Q
    |||||||||  ||||||  || ||||||||||||||||||| ||||||||||||    
T  48736203 atttctaattttatctcatctagtcttaccacacattcaacgcaacatcctcat 48736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 1740775 - 1740715
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| || | | ||| ||||||| |||||| |||| |||||||||||||||||||    
T  1740775 atttctaatcttaccccacctagtcttactacacatccaacgcaacatcctcatctctgct 1740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 5335999 - 5335923
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| || |||||||| || ||||||||||||||||||  || |||| ||||||||  |||| |||| ||||||    
T  5335999 gaatccacagttcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgctac 5335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 14593844 - 14593772
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||| ||||||||||  |||||||||||| ||||||||  || |||| ||||| || ||||| |||||||    
T  14593844 gaatccacaggtcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 14593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 317
Target Start/End: Original strand, 26742127 - 26742175
Alignment:
Q  269 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||||| | || ||||||||||||| ||||| |||||||||||    
T  26742127 caaaccacctaatcctattttccaccatcttttctactataggtgctac 26742175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 33350018 - 33350082
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 314  Q
    |||||||||| ||||||||||||||| |||||| || |||| | || ||| ||||| ||||||||    
T  33350018 ggtcttctctctacatgcccaaaccatctaagcctattttctagcaacttttctactataggtgc 33350082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 36136835 - 36136767
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||| |||||| || |||||||||| |||||||  || |||| |||||||| ||||| |||||||||||    
T  36136835 aggtattctctctatatgcccaaacaacctaagactattttctaccatcttttctactataggtgctac 36136767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 40830294 - 40830226
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| | |||||||||||||||||||   | |||| |||||||| ||| | |||||||||||    
T  40830294 aggtcttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtgctac 40830226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 42187448 - 42187393
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    ||||||||| ||||| || || ||||||| |||||| ||||||||||||||||||||    
T  42187448 atttctaat-atatcccgtctagtcttactacacatccaacacaacatcctcatctc 42187393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 316
Target Start/End: Complemental strand, 29398889 - 29398822
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 316  Q
    ||||||||||| |||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||    
T  29398889 aggtcttctctctacatgcccaaaccacataagcatattttccaccatcttttctaccataggtgcta 29398822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 410
Target Start/End: Complemental strand, 54470276 - 54470128
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgata 350  Q
    ||||||||| |||||||||||||||| ||||  || ||||||||||||| ||||| ||||||||    ||||||||||||||||       || ||| |     
T  54470276 gtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgc----taccccaactctctct-------ctaatgttg 54470188  T
Q  351 ttatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctct 410  Q
    ||||||| ||||||||| |  || |||||||||||||| |||  ||||||||||||||||    
T  54470187 ttatttcaaatcatatcccatctagtcttaccacacatccaatgcaacatcctcatctct 54470128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 31459098 - 31459033
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctac 31459033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 310
Target Start/End: Original strand, 42285903 - 42285972
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 310  Q
    ||||||| |||||||||||||||||||||||||||||||||  || |||| |||||||| ||||| ||||    
T  42285903 gaatccacaggtcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 46715576 - 46715649
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 315  Q
    |||||| | ||||||||| |||||||||| ||||||||||| || ||||||||||||| ||||| |||||||||    
T  46715576 aatccacatgtcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaataggtgct 46715649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 35555850 - 35555926
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| ||||||||||| || ||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  35555850 gaatccacaggtcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 35555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 334
Target Start/End: Original strand, 51252664 - 51252753
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||||| | ||||||||| |||||||||| ||||||||||| || ||||||||||||| ||||| | |||||||||    |||||||||||||    
T  51252664 gaatccacatgtcttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctac----cccaactctctct 51252753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 50662457 - 50662394
Alignment:
Q  251 gtcttctctatacatgcccaaa-ccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||| ||||| |||||||    
T  50662457 gtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtg 50662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 28236252 - 28236186
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||||||||||| |||||| || ||||||||| ||| ||||| |||||||||||    
T  28236252 gtcttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctac 28236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 413
Target Start/End: Complemental strand, 43433994 - 43433836
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgat 349  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||||||    |||||| ||||||||| |||   || ||| |    
T  43433994 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgc----tacccccactctctct-ctctctctaatggt 43433900  T
Q  350 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
     | ||| |||||| ||||| | || ||||| |||| ||| |||| |||||||||||||||||||    
T  43433899 gtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgct 43433836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 42639223 - 42639296
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgc 314  Q
    ||||||| | ||||||||| |||||| ||||||||||||||| |  ||||||||||||| ||||| ||||||||    
T  42639223 gaatccataagtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgc 42639296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 47611798 - 47611742
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||||| |||||||||||||||||||||| || |||||| |||||| |||||    
T  47611798 aggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctac 47611742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 31339634 - 31339540
Alignment:
Q  222 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||||||||  |  |||| | | ||||||||| ||||||| ||||||||||||||||| |||| ||||| || |||||||||||| ||||    
T  31339634 atctactatccttactacataatctacaagtcttctctctacatgctcaaaccacctaagcttagtttcgaccat-ttttctaccataggttctac 31339540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 31960026 - 31960093
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  31960026 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 31960093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 52569727 - 52569794
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  52569727 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 52569794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 53707864 - 53707797
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  53707864 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 53707797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 315
Target Start/End: Original strand, 38570950 - 38571024
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 315  Q
    ||||||| | ||||||| | |||||||||||||||||||||| || ||||||| ||||| | ||| |||||||||    
T  38570950 gaatccacatgtcttctttctacatgcccaaaccacctaagcctagtttccactatcttttgtactataggtgct 38571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 400
Target Start/End: Complemental strand, 44360155 - 44360014
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgata 350  Q
    ||||||||| ||||||||||||| |||||| | || |||| |||||||| ||||| |||||||    |||||||||||||||   ||||  || ||  |     
T  44360155 gtcttctctctacatgcccaaacaacctaatc-tagtttctaccatcttttctactataggtg----ataccccaactctct---ctccatctaatattg 44360064  T
Q  351 ttatttctaatcatatctcgcctggtcttaccacacattcaacacaacat 400  Q
    | |||||||||  |||||||||| ||| |||||||||| |||||||||||    
T  44360063 tcatttctaattctatctcgcctagtcctaccacacatccaacacaacat 44360014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 30853426 - 30853373
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 304  Q
    ||||||||| ||||||||||||||||||||||| | ||||||| ||||| ||||    
T  30853426 gtcttctctctacatgcccaaaccacctaagctgagtttccactatcttgtcta 30853373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 436300 - 436232
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||||||||||| || |||||| || |||| |||| ||| ||||| |||||||||||    
T  436300 aggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctac 436232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 20105775 - 20105831
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||||||||||| || |||||||||||||| || | ||||||| |||||||    
T  20105775 atttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctc 20105831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 413
Target Start/End: Original strand, 31403229 - 31403384
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatga 348  Q
    |||| |||||| ||||||||||| |||||||||| || |||||||||| || ||||| ||||||||    |||||||||||| |||| ||   || |||     
T  31403229 aggtgttctctttacatgcccaa-ccacctaagcctagtttccaccat-ttttctactataggtgc----taccccaactctatctg-tc--tctaatgt 31403319  T
Q  349 tattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    | | |||||||||| |||| || ||  ||| |||||||||||||| ||||||| |||||||||||    
T  31403320 tgtcatttctaatcctatcccgtctaatctcaccacacattcaactcaacatcatcatctctgct 31403384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 313
Target Start/End: Complemental strand, 33710003 - 33709931
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||| || ||||||||  ||||||| ||||||||||| | || ||||||||||||| ||||| |||||||    
T  33710003 gaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtg 33709931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 38266197 - 38266149
Alignment:
Q  269 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||||||    
T  38266197 caaaccacctaagcttagtttccaccatcctctctattataggtgctac 38266149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 41192907 - 41192839
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||||| |||| ||||||||  || ||||||||||||| |||||  ||||||||||    
T  41192907 aggtcttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctac 41192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 44860914 - 44860862
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctcta 304  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||||| ||||    
T  44860914 tcttctctatacatgcccaaaccatctaagcctggtttccaccatcttttcta 44860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 49987406 - 49987346
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| ||||  | || ||||||| | |||||||||||||||||||||||||||||    
T  49987406 atttctaatcctatcatgtctagtcttactaaacattcaacacaacatcctcatctctgct 49987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 49987487 - 49987435
Alignment:
Q  261 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    |||||| ||||||||||||||| || ||||||||||||| ||||| |||||||    
T  49987487 tacatgaccaaaccacctaagcctattttccaccatcttttctactataggtg 49987435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 50471597 - 50471541
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||||| |||||||||||||||| ||| | || ||||||||||||| |||||    
T  50471597 aggtcttctctctacatgcccaaaccacttaaacctagtttccaccatcttttctac 50471541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 33227279 - 33227212
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||| | |||||| || |||| |||| ||| ||||| |||||||||||    
T  33227279 ggtcttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctac 33227212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 48622755 - 48622822
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| || ||||||||    
T  48622755 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctac 48622822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 1793529 - 1793463
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| |||||| |||||||| ||||||||| |||| |||| ||| | ||| |||||||||||    
T  1793529 gtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactataggtgctac 1793463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 20591513 - 20591579
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||||||||||| |||| |||| |||| |||| ||| ||||| ||| |||||||    
T  20591513 gtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctactataagtgctac 20591579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 28497558 - 28497493
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| |||||||||||||||||||||| |  ||||||| ||||| ||||| | |||||||||    
T  28497558 gtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctactaaaggtgctac 28497493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Complemental strand, 44860810 - 44860772
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  44860810 gtcttaccacacatccaacacaacatcctcatttctgct 44860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 4440923 - 4440858
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 315  Q
    |||||||||| || |||||||||||| |||||| || |||| |||| ||| ||||| |||||||||    
T  4440923 ggtcttctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 4440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 30621418 - 30621483
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||| |||||||| ||||||| | || ||||||||||||| ||||| ||| |||||||    
T  30621418 tcttctctctacgtgcccaaatcacctaaacctattttccaccatcttttctactataagtgctac 30621483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 37797920 - 37797855
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  37797920 tcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 37797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 408
Target Start/End: Original strand, 40933222 - 40933255
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatct 408  Q
    ||||||||||||||||||| ||||||||||||||    
T  40933222 gtcttaccacacattcaacgcaacatcctcatct 40933255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 10209105 - 10209037
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||  ||||||||||||||| ||||| ||| ||||  ||||||| ||||| |||||| ||||    
T  10209105 aggtcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggttctac 10209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 13805469 - 13805509
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagc 282  Q
    |||| ||||||||||||| ||||| ||||||||||||||||    
T  13805469 aatctaaaggtcttctctctacatacccaaaccacctaagc 13805509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 42293472 - 42293528
Alignment:
Q  261 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||| ||||||||||||||||  | |||||| |||||| ||||| |||||||||||    
T  42293472 tacatacccaaaccacctaagccgagtttccatcatcttttctactataggtgctac 42293528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 44641936 - 44641996
Alignment:
Q  140 tatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 200  Q
    ||||| ||||| | ||||||||||  |||||||||||| |||||||||||| | |||||||    
T  44641936 tatagtttttcgaagtcttcttctgtctttagtgatttgactactctccatttgatctact 44641996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 44686700 - 44686744
Alignment:
Q  140 tatagcttttcaaggtcttcttctacctttagtgatttaactact 184  Q
    ||||| ||||| |||||||||||| ||| ||||||||||||||||    
T  44686700 tatagtttttcgaggtcttcttctgcctctagtgatttaactact 44686744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 45205156 - 45205208
Alignment:
Q  357 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||| |||| || || |||||||||| ||| ||||||||||||||||||||    
T  45205156 ctaatcctatcccgtctagtcttaccactcatccaacacaacatcctcatctc 45205208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 56375264 - 56375208
Alignment:
Q  357 ctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||| ||||| | || |||||||||| ||| |||| |||||||||||||||||||    
T  56375264 ctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgct 56375208  T

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Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 44078 - 44147
Alignment:
Q  248 aaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||||| |||||||||||||||||||||| || ||||| ||||||| ||||| |||||||||||    
T  44078 aaggtcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactataggtgctac 44147  T

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Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 31538 - 31471
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  31538 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 31471  T

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Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 5338795 - 5338727
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||    
T  5338795 aggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtgctac 5338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 413
Target Start/End: Complemental strand, 9509388 - 9509236
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgat 349  Q
    |||||||||| ||||||||||||| |||||||| || |||  |||||||| ||||| ||||||||    ||||||||||||||||       || ||| |    
T  9509388 ggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgc----taccccaactctctct-------ctaatggt 9509300  T
Q  350 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
     | |||||||||||||||  | || |||||| ||| ||| ||||||||||||||||||||||||    
T  9509299 gtcatttctaatcatatcctgtctagtcttatcactcatccaacacaacatcctcatctctgct 9509236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 27848016 - 27848084
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| | ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||||    
T  27848016 aggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctaccacaggtgctac 27848084  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 48431619 - 48431685
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||| ||||| |||||    
T  48431619 gtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactataggggctac 48431685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 35828761 - 35828829
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||| | ||||||||||||| | || ||||||||||||| |||||||||||||||||    
T  35828761 aggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctaccataggtgctac 35828829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 34792561 - 34792628
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| ||||||| |||| ||| ||||| |||||||||||    
T  34792561 ggtcttctctctacatgcccaaaccatctaagcctactttctaccaacttttctactataggtgctac 34792628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 409
Target Start/End: Complemental strand, 4380081 - 4379927
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctc-ctc-ctcatgat 349  Q
    |||||||| ||||||   ||||||||||| |||| ||||||||||||| ||||| |||| ||||||    |||||| ||| || ||| ||| || ||| |    
T  4380081 tcttctctctacatgtataaaccacctaaccttagtttccaccatcttttctactatagttgctac----cccaacactcact-ctctctctctaatgtt 4379987  T
Q  350 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
     | ||||||||||||||||   || |||||||||||||| ||||||||||||||||||||    
T  4379986 gtcatttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctc 4379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 413
Target Start/End: Original strand, 9599620 - 9599758
Alignment:
Q  264 atgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgatattatttctaatca 363  Q
    |||||| |||||||||||| || |||| |||||||| ||||| ||||||| |||     ||||||||||||       || ||||| | ||| |||||||    
T  9599620 atgcccgaaccacctaagcctattttctaccatcttttctactataggtgttact----ccaactctctct-------ctaatgatgtcattcctaatca 9599708  T
Q  364 tatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||| || || |||||||||| ||| ||||||||||||||||||||||||    
T  9599709 tatcccgtctagtcttaccactcatccaacacaacatcctcatctctgct 9599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 43423788 - 43423726
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||||| |||||| ||||||||||||||| || ||||||||||||| ||||| |||||||    
T  43423788 gtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtg 43423726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 317
Target Start/End: Original strand, 14226047 - 14226108
Alignment:
Q  256 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||| |||||||||||||||||||||| || ||||||||||||| ||||  |||||||||||    
T  14226047 ctctctacatgcccaaaccacctaagcctattttccaccatcttttctatgataggtgctac 14226108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 40416439 - 40416374
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| |||||||| ||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  40416439 tcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctac 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 1661501 - 1661433
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||||| ||||||| || ||| || ||||||||||||| ||||| |||||||||||    
T  1661501 aggtcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctac 1661433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 2544670 - 2544602
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||||| ||||||||||||||  |  ||||||||||||| ||||| |||||||||||    
T  2544670 aggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctac 2544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 317
Target Start/End: Original strand, 3819059 - 3819135
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| | ||||||| | |||||||||||||||| ||||  || || |||||||||| |||||||||||||||||    
T  3819059 gaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgctac 3819135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 52442808 - 52442868
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| ||||| | || |||||||||||||| ||||||||||||||||| ||||||    
T  52442808 atttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgct 52442868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 1210815 - 1210748
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1210815 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1210748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 8343062 - 8343125
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    |||||| ||||||||||| ||||||||||  |||||||||| || ||||||||||||| |||||    
T  8343062 aatccacaggtcttctctctacatgcccagtccacctaagcctagtttccaccatcttttctac 8343125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 38868948 - 38868885
Alignment:
Q  254 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||| ||||||||||||||||||||||  | ||||||||||||| ||||  |||||||||||    
T  38868948 ttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctatgataggtgctac 38868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 51602126 - 51602059
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  51602126 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 51602059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 315
Target Start/End: Original strand, 13827928 - 13827994
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 315  Q
    ||||||||||| ||||||  |||||||||||| | || ||||||||||||| ||||| |||||||||    
T  13827928 aggtcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactataggtgct 13827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 8671986 - 8671921
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  8671986 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 8671921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 32404737 - 32404801
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||||||| |||||  ||||||||||||||| || ||||||||||||| | ||| |||||||    
T  32404737 aggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtg 32404801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 34827406 - 34827462
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||| ||| ||| || |||||||||| ||| ||||||||||||||||||||    
T  34827406 atttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatctc 34827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 15086004 - 15085937
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  15086004 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 15085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 22090166 - 22090099
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||  ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  22090166 ggtcttctccctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 22090099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 23791848 - 23791923
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||| | ||||||||| ||||||| ||||||||||||| ||| | || |||||||| |||||||| ||| ||||    
T  23791848 aatccacatgtcttctctctacatgcacaaaccacctaagtttagtatctaccatcttttctaccatgggtcctac 23791923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 26016418 - 26016355
Alignment:
Q  350 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||| |||| |||||  | || |||||||||||||| |||| |||||||||||||||||||    
T  26016418 attatttataattatatcctgtctagtcttaccacacatccaacgcaacatcctcatctctgct 26016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 39140590 - 39140523
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||||||||||  | |||   ||||||| ||||| |||||||||||    
T  39140590 ggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgctac 39140523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 51440977 - 51441040
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||    
T  51440977 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg 51441040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 10569278 - 10569328
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 299  Q
    ||||||||||| ||||||||||||||||||||||  | ||| |||||||||    
T  10569278 aggtcttctctctacatgcccaaaccacctaagccaagttttcaccatctt 10569328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 32231167 - 32231233
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||||||||||| |||||| || |||| ||||  || ||||| |||||||||||    
T  32231167 gtcttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctac 32231233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 36340014 - 36340083
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 318  Q
    ||||||||||| | |||| | ||||||||||| | || ||||||||||||| ||||  ||||||||||||    
T  36340014 aggtcttctctctccatgtctaaaccacctaaacctattttccaccatcttttctaatataggtgctaca 36340083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 1661404 - 1661344
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| |||| |  || |||||| || ||||||||||||||||| |||||||||||    
T  1661404 atttctaatcctatcacatctagtcttatcagacattcaacacaacatcttcatctctgct 1661344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 16822233 - 16822289
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||||| |||||| |||||||||||||||  | |||| |||||||| |||||    
T  16822233 aggtcttctctctacatgtccaaaccacctaagccgagtttctaccatcttgtctac 16822289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 17815537 - 17815493
Alignment:
Q  255 tctctatacatgcccaaaccacctaagcttactttccaccatctt 299  Q
    ||||| ||||||||||||||| |||||| || |||||||||||||    
T  17815537 tctctctacatgcccaaaccaactaagcctagtttccaccatctt 17815493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 19908250 - 19908318
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||| |||||| |||||||||||| ||||||| |||  ||||| ||||||| | ||| |||||||||||    
T  19908250 aggttttctctctacatgcccaaatcacctaaacttggtttcccccatcttttttactataggtgctac 19908318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 51812591 - 51812535
Alignment:
Q  254 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 310  Q
    |||||| |||||||||||| ||| ||||| || ||||||||||||| ||||| ||||    
T  51812591 ttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatag 51812535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 7e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 29700374 - 29700279
Alignment:
Q  222 atctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| |||||||  | |||||||| |||||| ||| || |||||||||||||||||||  ||||||| ||||||| ||||| |||||||||||    
T  29700374 atctactctccttactacagaatccaatggtcttttctctatatgcccaaaccacctaagccaactttcctccatcttttctactataggtgctac 29700279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 9695698 - 9695634
Alignment:
Q  253 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| ||||||||||||||||||||||  | ||||||||||||| ||||| |||||||||||    
T  9695698 cttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctac 9695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 35643814 - 35643868
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| |||||    
T  35643814 gtcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctac 35643868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 13171865 - 13171926
Alignment:
Q  254 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgct 315  Q
    |||||| || ||||||||||||||||||| || ||||||||||||| ||||| |||||||||    
T  13171865 ttctctttatatgcccaaaccacctaagcatattttccaccatcttttctactataggtgct 13171926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 45512709 - 45512774
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| || |||||||||||| ||||||||| |||||| |||||| ||||| |||||||||||    
T  45512709 tcttctctttatatgcccaaaccatctaagcttattttccatcatcttttctactataggtgctac 45512774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 12491350 - 12491417
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  12491350 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 12491417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 18474173 - 18474239
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||| ||||||| |||||| || ||||||||||| | ||||| |||||||||||    
T  18474173 gtcttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtgctac 18474239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 41971991 - 41972045
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||| |||||| ||||||||||||| |||| ||||||||||||| |||||    
T  41971991 gtcttctctctacatgtccaaaccacctaaacttattttccaccatcttttctac 41972045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 79114 - 79081
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagc 282  Q
    ||||||||||||||||||||||||||||||||||    
T  79114 aggtcttctctatacatgcccaaaccacctaagc 79081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 413
Target Start/End: Complemental strand, 36545219 - 36545065
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgat 349  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||     |||||| ||||||||| ||    || ||| |    
T  36545219 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtg----ttacccccactctctct-ct----ctaatggt 36545129  T
Q  350 attatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
     | ||| |||||| ||||  | || |||||||||| ||| ||||||||||||||||||||||||    
T  36545128 gtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgct 36545065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 12611613 - 12611537
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 318  Q
    |||||| |||| |||| | ||||| | |||||||||||||| || ||||||||||||| |||||  |||||||||||    
T  12611613 aatccacaggtgttctgtctacatacgcaaaccacctaagcctagtttccaccatcttttctactttaggtgctaca 12611537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 16917251 - 16917199
Alignment:
Q  253 cttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||| |||||||||||||||||||||| || ||| ||||||||| |||||    
T  16917251 cttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttctac 16917199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 30456535 - 30456575
Alignment:
Q  373 tggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  30456535 tggtcttaccacacatccaacgcaacatcctcatctctgct 30456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 30748528 - 30748472
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||||| |||||||||||||||||||||| |   |||||||||||| |||||    
T  30748528 aggtcttctctctacatgcccaaaccacctaagccttgattccaccatcttttctac 30748472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 41444549 - 41444605
Alignment:
Q  261 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||| ||||||||||||| | || ||||||||||||| ||||| |||||||||||    
T  41444549 tacatgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctac 41444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 45419308 - 45419240
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| ||| |||||||||||||||||||||  || |||  |||||||| ||||| |||||||||||    
T  45419308 aggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctactataggtgctac 45419240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 2776441 - 2776508
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||  |||||||||||||||||||||  | |||| |||||| | ||||| |||||||||||    
T  2776441 ggtcttctctcaacatgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgctac 2776508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 408
Target Start/End: Original strand, 28300416 - 28300471
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatct 408  Q
    |||||||||| ||||||  || ||||||| |||||| |||||||||||||||||||    
T  28300416 atttctaatcttatctcatctagtcttactacacatccaacacaacatcctcatct 28300471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 354 - 413
Target Start/End: Complemental strand, 36143346 - 36143287
Alignment:
Q  354 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||||| ||||||  || ||||||||||||   ||||||||||||||||||||||||    
T  36143346 tttctaatcctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgct 36143287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 36565457 - 36565520
Alignment:
Q  254 ttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  36565457 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 36565520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 16917335 - 16917293
Alignment:
Q  140 tatagcttttcaaggtcttcttctacctttagtgatttaacta 182  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||    
T  16917335 tatagcttttctaggtcttcttctacctgtagtgatttgacta 16917293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 334
Target Start/End: Complemental strand, 32043667 - 32043580
Alignment:
Q  243 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||| ||||||||||| |||||| |||||||||| |||  || |||| |||||||| | ||| |||||||    |||||||||||||||||    
T  32043667 atccacaggtcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactataggtg----ataccccaactctctct 32043580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Complemental strand, 36069620 - 36069570
Alignment:
Q  354 tttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctc 404  Q
    ||||||||| |||| || || |||||||||||||| |||||||||||||||    
T  36069620 tttctaatcttatcccgtctagtcttaccacacatccaacacaacatcctc 36069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 413
Target Start/End: Original strand, 39760754 - 39760788
Alignment:
Q  379 taccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| ||||||||||||||||||||||||    
T  39760754 taccacacatccaacacaacatcctcatctctgct 39760788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 36395160 - 36395229
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacct-aagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||||||||||||| || |||| || |||| |||| ||| ||||| |||||||||||    
T  36395160 aggtcttctctctacatgcccaaaccatctaaagcctattttctaccaacttttctactataggtgctac 36395229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 40813392 - 40813327
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||||||||||||| |||| | || |||| |||| ||| ||||| |||||||||||    
T  40813392 tcttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctac 40813327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 43904876 - 43904947
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagc---ttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||||| |||||||||||||||   ||| ||||| ||||||| ||||| |||| ||||||    
T  43904876 aggtcttctctctacatgtccaaaccacctaagcttattattttcctccatcttttctactatagatgctac 43904947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 17491832 - 17491888
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||||| ||||| ||||||||||||||| ||| | |||||||| || |||||    
T  17491832 aggtcttctctctacatacccaaaccacctaagtttattgtccaccatattttctac 17491888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 36143436 - 36143368
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| ||| || ||||||||||||||||||  || ||||||||||||  ||| | |||||||||||    
T  36143436 aggtcttttctctaaatgcccaaaccacctaagtctattttccaccatctattctgctataggtgctac 36143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 39946928 - 39946860
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| | |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  39946928 aggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 39946860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 44681250 - 44681318
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| || ||  |||||||  ||||||||| ||||||||||||| ||||  |||||||||||    
T  44681250 aggtcttctctctagatttccaaaccttctaagcttattttccaccatcttttctattataggtgctac 44681318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 33667294 - 33667219
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||| ||||||||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  33667294 aatccacaggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 33667219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 31636132 - 31636199
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||||||||||||||||  || |||| |||||||| ||||| |||||||||||    
T  31636132 ggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctac 31636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 28676668 - 28676598
Alignment:
Q  247 aaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||||| |||||||| ||||||||||||  || ||||||||||||| ||||| |||| ||||||    
T  28676668 aaaggtcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctac 28676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 42199399 - 42199301
Alignment:
Q  207 actactgtccatattatctactatccttacggctgaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    |||||| ||||| | ||||||| |||||||  | ||||| | | ||||||||| |||||||||||||||||||||  || ||||||||||||| |||||    
T  42199399 actactctccatgtgatctactctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac 42199301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 43558040 - 43558106
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| || |||||||||||||||||||||| ||||||||||||| ||||  |||| ||||||    
T  43558040 gtcttctctctatatgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctac 43558106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 413
Target Start/End: Original strand, 1287792 - 1287953
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct-gctc-ctc-ctcatg 347  Q
    ||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||||||    |||||| |||||||||  ||| ||| || |||    
T  1287792 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgc----tacccccactctctctctctctctctctaatg 1287887  T
Q  348 atattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    || | ||| |||||| ||||  | || |||||||||| ||| |||| |||||||||||||||||||    
T  1287888 atgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgct 1287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 43475311 - 43475243
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |  || |||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  43475311 aggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtgctac 43475243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 4496454 - 4496387
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  4496454 ggtcttctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctac 4496387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 408
Target Start/End: Complemental strand, 21952329 - 21952274
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatct 408  Q
    |||||||||| ||||||| || |||||||||||||| |||| ||||||||||||||    
T  21952329 atttctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatct 21952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 41833793 - 41833863
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatc--ttctctaccataggtgctac 317  Q
    ||||||| ||| |||||||||||||||||||||| ||  ||||||||||  |||| |||||||||||||||    
T  41833793 aggtcttgtctctacatgcccaaaccacctaagcatatgttccaccatcttttctataccataggtgctac 41833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 1275332 - 1275267
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1275332 tcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1275267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 15489706 - 15489784
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    |||||||| ||||||||||||||| ||||||| | |||| |||||||| ||||| |||||| ||||    |||||||||||||    
T  15489706 tcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaataggtactac----cccaactctctct 15489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 18351118 - 18351187
Alignment:
Q  249 aggtcttctctataca-tgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||| |||||||||||||||||| || |||| ||||| || ||||| |||||||||||    
T  18351118 aggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactataggtgctac 18351187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 2713023 - 2712947
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| ||||||||||| |||||||||||||||||||||  || | || |||||||| |  || |||||||||||    
T  2713023 gaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctac 2712947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 34273098 - 34273030
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||  |||||||||||    
T  34273098 aggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctac 34273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 14665784 - 14665717
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| | || ||||||||| |||||||||||    
T  14665784 ggtcttctctctacatgtccaaaccatctaagcctattttctatcaacttctctactataggtgctac 14665717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 16347590 - 16347657
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  16347590 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 16347657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 24178580 - 24178513
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||  |||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  24178580 ggtcttctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 24178513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 28977071 - 28977138
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||| ||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  28977071 ggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctac 28977138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 38685037 - 38684970
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  38685037 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 38684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 14667816 - 14667766
Alignment:
Q  267 cccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||||||||  || ||||||||||||| ||||| |||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttctactataggtgctac 14667766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 3775195 - 3775256
Alignment:
Q  138 cttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctac 199  Q
    ||||||| ||||| |||||||||||| ||| ||||||||| |||||| ||||| | ||||||    
T  3775195 cttatagtttttctaggtcttcttctgcctctagtgatttgactactatccatttaatctac 3775256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 6889071 - 6889014
Alignment:
Q  242 aatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 299  Q
    |||||| | ||||||||| |||||| ||||||||| ||||| || |||||||||||||    
T  6889071 aatccacaagtcttctctctacatgtccaaaccacttaagcctattttccaccatctt 6889014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 390
Target Start/End: Original strand, 8492627 - 8492664
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattc 390  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  8492627 atttctaattatatctcgtctggtcttaccacacattc 8492664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 14749386 - 14749309
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctaca 318  Q
    ||||||| ||||||||||| |||||| |||||||| |||||  || |||| ||||  || ||||| ||||||||||||    
T  14749386 gaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctaca 14749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 27944 - 27896
Alignment:
Q  269 caaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||||||| || |||||| |||||| ||||| |||||||||||    
T  27944 caaaccacctaagcctattttccatcatcttttctactataggtgctac 27896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 79584 - 79516
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||||| |||||||||||||   |  ||||||||||||| ||||| |||||| ||||    
T  79584 aggtcttctctctacatgtccaaaccacctaattatgttttccaccatcttttctactataggtactac 79516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 6859460 - 6859384
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||| | ||||||||| ||| || |||||||||||| || |  |||||||||||||||  || |||||||||||    
T  6859460 gaatccacaagtcttctctctacgtgtccaaaccacctatgcctgttttccaccatcttcttcactataggtgctac 6859384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 12492596 - 12492656
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccatag 310  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| ||||    
T  12492596 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatag 12492656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 21193858 - 21193910
Alignment:
Q  256 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccat 308  Q
    |||| |||||||||||| ||||||||  || |||||||||| |||||||||||    
T  21193858 ctctctacatgcccaaatcacctaagtctagtttccaccatattctctaccat 21193910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 27998379 - 27998343
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctg 411  Q
    |||||||||||||| |||| |||||||||||||||||    
T  27998379 gtcttaccacacatccaacgcaacatcctcatctctg 27998343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 38578734 - 38578782
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 299  Q
    ||||||||| ||||||| ||||||||||||| ||| |||| ||||||||    
T  38578734 gtcttctctttacatgctcaaaccacctaagtttagtttctaccatctt 38578782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 413
Target Start/End: Complemental strand, 8180857 - 8180698
Alignment:
Q  243 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcc 342  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||| |||| |||| ||| ||||| ||||||||    |||||| |||||||||       |    
T  8180857 atccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaacttttctactataggtgc----tacccccactctctct-------c 8180769  T
Q  343 tcatgatattatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    | ||| | | ||| |||||| ||||  | || |||||||||| ||| ||||||||||||||||||||||||    
T  8180768 taatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgct 8180698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 13240958 - 13241016
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccata 309  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||| |||| ||||    
T  13240958 gtcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttctaacata 13241016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 12141615 - 12141547
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| | ||| |||||||||||||||||| |  ||||||||||||| ||||| |||||||||||    
T  12141615 aggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctac 12141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 19024239 - 19024183
Alignment:
Q  261 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||| |||||||||||||||||||||||||||||||| || |  |||||||||||    
T  19024239 tacatgtccaaaccacctaagcttactttccaccatcttttcaaatataggtgctac 19024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 43238305 - 43238372
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  43238305 ggtcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctac 43238372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 25834758 - 25834684
Alignment:
Q  243 atccaaaggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||| ||||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  25834758 atccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 25834684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 18958959 - 18958910
Alignment:
Q  268 ccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||||||| || ||||||||||||| ||||| |||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttctactataggtgctac 18958910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 290
Target Start/End: Complemental strand, 42543314 - 42543265
Alignment:
Q  241 gaatccaaaggtcttctctatacatgcccaaaccacctaagcttactttc 290  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||| ||||    
T  42543314 gaatccacaggtcttctctgtacatgcccaaaccacctaagtttagtttc 42543265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 7825336 - 7825276
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||||||||  | || |||||||||||||| |||| ||||||||| |||||||||    
T  7825336 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgct 7825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 9556672 - 9556724
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctca 405  Q
    ||||||||||||||| || ||  ||||||||||||| ||||||||||||||||    
T  9556672 atttctaatcatatcccgtctaatcttaccacacatccaacacaacatcctca 9556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 9647909 - 9647969
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| |||| |  || |||||||||||||| |||| |||||||||||||||||||    
T  9647909 atttctaatcttatcacatctagtcttaccacacatccaacgcaacatcctcatctctgct 9647969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 43752158 - 43752239
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctct 334  Q
    ||||||||||| |||||| ||||| ||||||||| || |||| |||| ||| ||||| |||||||||||    |||||||||||||    
T  43752158 aggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctac----cccaactctctct 43752239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 11992320 - 11992387
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| || ||| |||||||| ||||||||| |||| |||| ||| ||||| |||||||||||    
T  11992320 ggtcttctctctatatgtccaaaccatctaagcttattttctaccaacttttctactataggtgctac 11992387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 36183521 - 36183454
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||| |||||| ||||| ||| |||| |||| ||| ||||| |||||||||||    
T  36183521 ggtcttctctctacatgccgaaaccaactaagattattttctaccaacttttctactataggtgctac 36183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 38435021 - 38434954
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagct-tactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||||||||||||| ||  | || ||||||||||||| ||||| |||||||||||    
T  38435021 gtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctac 38434954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 38452897 - 38452964
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| ||||||||||||||| |||||| || |||| |||| ||| ||||| |||| ||||||    
T  38452897 ggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctac 38452964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 45367837 - 45367904
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| ||||| ||| |||| |||| ||| ||||| |||||||||||    
T  45367837 ggtcttctctctacatgtccaaaccatctaaggttattttctaccaacttttctactataggtgctac 45367904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 2610657 - 2610591
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||| ||||||||||||||| |||||| || |||| |||| ||| || || |||||||||||    
T  2610657 gtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctac 2610591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 3481212 - 3481162
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatctt 299  Q
    ||||||||||| |||||| ||||||||||||||| |  |||||||||||||    
T  3481212 aggtcttctctctacatgtccaaaccacctaagcctgttttccaccatctt 3481162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 14197375 - 14197437
Alignment:
Q  251 gtcttctctatacatgcccaaaccacct-aagcttactttccaccatcttctctaccataggt 312  Q
    |||||| || |||||||||||||||||| |||| || ||||||||||||| ||||| ||||||    
T  14197375 gtcttcactctacatgcccaaaccacctaaagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 9556582 - 9556627
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccat 296  Q
    ||||||||| |||||||| ||||||||||||| || ||||||||||    
T  9556582 gtcttctctctacatgcctaaaccacctaagcctattttccaccat 9556627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 11412777 - 11412724
Alignment:
Q  264 atgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||||| || |||||||||| || ||||| |||||||||||    
T  11412777 atgcccaaacaacctaagcctattttccaccatattttctactataggtgctac 11412724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 12026216 - 12026264
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatc 297  Q
    ||||||||||| ||||||  |||||||||||||| || |||||||||||    
T  12026216 aggtcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 12734679 - 12734623
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||| |||| || || |||||||||| ||| || |||||||||||||||||    
T  12734679 atttctaatcctatcccgtctagtcttaccactcatccagcacaacatcctcatctc 12734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 404
Target Start/End: Original strand, 37393470 - 37393522
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccaca-cattcaacacaacatcctc 404  Q
    |||||| ||||||||||  || ||||||||||| |||||||||||||||||||    
T  37393470 atttctgatcatatctcatctagtcttaccacaacattcaacacaacatcctc 37393522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 41763253 - 41763317
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtg 313  Q
    ||||||||||| | |||| ||||||||||||||| || |||| |||| ||| ||||| |||||||    
T  41763253 aggtcttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtg 41763317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 41779610 - 41779670
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| |||| ||||| |||||| |||||||| ||  |||||| ||||||||||||    
T  41779610 atttctaatcctatcccgcctagtcttaacacacatttaatgcaacattctcatctctgct 41779670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 42092497 - 42092437
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||||||||||| || || ||||||| |||||| |||  ||||||| |||||||||||    
T  42092497 atttctaatcatatcccgtctagtcttactacacatccaatgcaacatcatcatctctgct 42092437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 409
Target Start/End: Complemental strand, 45077726 - 45077670
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    |||||||||  ||||| | || |||||||||||||| |||| |||||||||||||||    
T  45077726 atttctaattctatctagtctagtcttaccacacatccaacgcaacatcctcatctc 45077670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 33084129 - 33084061
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| ||||| |||||||||||||||  || |||| |||||||| |||||||||||||||||    
T  33084129 aggtcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctac 33084061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 9593919 - 9594072
Alignment:
Q  251 gtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctacataccccaactctctctgctcctcctcatgata 350  Q
    ||||||||| |||||||||||||||||||||| || |||| |||||||| ||||| |  |||||    ||||||||||| |||| |||   || ||| |     
T  9593919 gtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgc----taccccaactccctct-ctctctctaatggtg 9594013  T
Q  351 ttatttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctc 409  Q
    | ||| |||||| |||| || || |||||||||| ||| |||| |||||||||||||||    
T  9594014 tcattcctaatcctatcccgtctagtcttaccactcatccaacgcaacatcctcatctc 9594072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 14389379 - 14389446
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    ||||||||||| |||||| |||||||||||||| ||  ||||||||||||| ||||| |||||||||||    
T  14389379 aggtcttctctctacatgtccaaaccacctaag-tttgtttccaccatcttttctacgataggtgctac 14389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 21870201 - 21870255
Alignment:
Q  146 ttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 200  Q
    ||||| |||||||| ||| ||||||||||||| |||||||||||| |||||||||    
T  21870201 ttttctaggtcttcctctgcctttagtgatttgactactctccatcttatctact 21870255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 31818685 - 31818623
Alignment:
Q  138 cttatagcttttcaaggtcttcttctacctttagtgatttaactactctccatattatctact 200  Q
    ||||||| ||||| ||||||||| |||||||||||||| | ||||| |||||||| |||||||    
T  31818685 cttatagtttttctaggtcttctcctacctttagtgatctcactaccctccatatgatctact 31818623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 297
Target Start/End: Original strand, 33997765 - 33997801
Alignment:
Q  261 tacatgcccaaaccacctaagcttactttccaccatc 297  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33997765 tacatgcccaaaccacctaagcttagtttccaccatc 33997801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 5258360 - 5258427
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  5258360 ggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactataggtgctac 5258427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 413
Target Start/End: Original strand, 6293678 - 6293733
Alignment:
Q  358 taatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    ||||||||||| | ||  | ||||||||||| ||||||||||||||||||||||||    
T  6293678 taatcatatctagtctaattttaccacacatccaacacaacatcctcatctctgct 6293733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 312
Target Start/End: Complemental strand, 24665881 - 24665818
Alignment:
Q  249 aggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggt 312  Q
    ||||||||||| |||||| ||||||||||||||| || |||| ||||| || ||||| ||||||    
T  24665881 aggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactataggt 24665818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 28085446 - 28085379
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  28085446 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctac 28085379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 410
Target Start/End: Original strand, 5129164 - 5129198
Alignment:
Q  376 tcttaccacacattcaacacaacatcctcatctct 410  Q
    |||||||||||||||||| ||||||||||||||||    
T  5129164 tcttaccacacattcaacgcaacatcctcatctct 5129198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Complemental strand, 32755875 - 32755837
Alignment:
Q  375 gtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  32755875 gtcttaccactcatccaacacaacatcctcatctctgct 32755837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 317
Target Start/End: Complemental strand, 2079408 - 2079343
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||| ||||| || ||||||| ||||| || ||||||||||||| ||||| |||| ||||||    
T  2079408 tcttctctctacatacctaaaccacttaagcctattttccaccatcttttctactatagatgctac 2079343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 4948529 - 4948578
Alignment:
Q  256 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||| |||||||||||||||||  | ||||||||||||| |||||    
T  4948529 ctctatacaggcccaaaccacctaagccgaatttccaccatcttttctac 4948578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 4955500 - 4955549
Alignment:
Q  256 ctctatacatgcccaaaccacctaagcttactttccaccatcttctctac 305  Q
    ||||||||| |||||||||||||||||  | ||||||||||||| |||||    
T  4955500 ctctatacaggcccaaaccacctaagccgaatttccaccatcttttctac 4955549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 8364631 - 8364575
Alignment:
Q  261 tacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||||||||||||||| || |||| |||| ||| ||||| |||| ||||||    
T  8364631 tacatgcccaaaccacctaagcctattttcaaccaccttttctactatagttgctac 8364575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 409
Target Start/End: Complemental strand, 26291732 - 26291700
Alignment:
Q  377 cttaccacacattcaacacaacatcctcatctc 409  Q
    ||||||||||||||||||||||||| |||||||    
T  26291732 cttaccacacattcaacacaacatcatcatctc 26291700  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 33998308 - 33998368
Alignment:
Q  353 atttctaatcatatctcgcctggtcttaccacacattcaacacaacatcctcatctctgct 413  Q
    |||||||||| |||| |  || |||||||||||||| |||| ||||||| |||||||||||    
T  33998308 atttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgct 33998368  T

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Target: scaffold0325 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 316
Target Start/End: Complemental strand, 11866 - 11802
Alignment:
Q  252 tcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgcta 316  Q
    |||||||| ||||||||||||||||||||||  | || | |||||||| ||||| ||||||||||    
T  11866 tcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgcta 11802  T

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Target: scaffold0570 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 1160 - 1227
Alignment:
Q  250 ggtcttctctatacatgcccaaaccacctaagcttactttccaccatcttctctaccataggtgctac 317  Q
    |||||||||| |||||| |||||||| |||||| || |||| |||| ||| ||||| |||||||||||    
T  1160 ggtcttctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctac 1227  T

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