View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2800_high_4 (Length: 355)
Name: NF2800_high_4
Description: NF2800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2800_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 7 - 353
Target Start/End: Complemental strand, 17261482 - 17261140
Alignment:
| Q |
7 |
tatggtgttgcaatatcttttattgtttgaattggtatgggttataataaccacatctttcacgatcttatatgtgccaaatatctaagagctagcaata |
106 |
Q |
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| T |
17261482 |
tatggtgtagcaatatcttttattgtttgaattggtatgggttataataaccacatctttcacgatcttatatgtgccaaatatctaagagctagcaata |
17261383 |
T |
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| Q |
107 |
gtaacattaattgtaatataaagcctattatgcaaactaagatgcataatgtccaaaacattgattagacactagagcatttcattacatcaaagtctag |
206 |
Q |
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| T |
17261382 |
gtaacatt----gtaatataaagcctatgatgcaaactaagatgcataatgtccaaaacattgattagacactagagcatttcattacatcaaagtctag |
17261287 |
T |
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| Q |
207 |
tttatgttttgacaaaatcagaaggatttgtttttactaaacaaaagacattattaattattttgaaaataaacttttggatactttttaatctccaaaa |
306 |
Q |
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| T |
17261286 |
tttatgttttgacaaaatcagaaggttttgtttttactaaacaaaagacattattaattattttgaaaataaacttttggatactttttaatctccaaaa |
17261187 |
T |
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| Q |
307 |
agaaacacccaaggtctcaagtgtgtattattttaaatggagatgtt |
353 |
Q |
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| T |
17261186 |
agaaacacccaaggtctcaagtgtatattaacttaaatggagatgtt |
17261140 |
T |
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