View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2800_high_9 (Length: 327)
Name: NF2800_high_9
Description: NF2800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2800_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 314
Target Start/End: Complemental strand, 7193337 - 7193044
Alignment:
| Q |
20 |
tgagagatattgtttgacacacaaaaatcagacaccatatatataccatgaaggaatatcaaataagaccaatgatataattatcaaactatttttatga |
119 |
Q |
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| T |
7193337 |
tgagagatattgtttgacacacaaaaatcagacaccatatatataccatgaaggaatatcaaataagaccaatgatataattatcaaactatttttatga |
7193238 |
T |
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| Q |
120 |
agcatatcaatcattggttgattcccattattataaatataaattttgcaacaataaattgaaagtaatgcataaataattagaaggtataatcaattaa |
219 |
Q |
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| T |
7193237 |
agcatattaatcattggttgattcccattattataaatataaattgtgcaacaataaattgaaagtaacacataaataattagaaggtataat-aattaa |
7193139 |
T |
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| Q |
220 |
aatatggaactagtattaaattcaaaaactgaaaataacaattattttgagacattattttattcatatgaaagttattatgggatgagggagta |
314 |
Q |
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| T |
7193138 |
aatatggaactagtattaaattcaaaaactgaaaataacaattattttgagacattattttattcatatgaaagttattatgggatgtgggagta |
7193044 |
T |
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