View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2801_low_3 (Length: 365)
Name: NF2801_low_3
Description: NF2801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2801_low_3 |
 | |
|
| [»] scaffold0291 (1 HSPs) |
| | |
|
| [»] scaffold0651 (1 HSPs) |
| | |
|
| [»] scaffold0119 (1 HSPs) |
| | |
|
| [»] scaffold0018 (1 HSPs) |
| | |
|
| [»] scaffold0027 (1 HSPs) |
| | |
|
| [»] scaffold0687 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
| | |
|
| [»] scaffold0049 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 24 - 357
Target Start/End: Original strand, 8726395 - 8726717
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttctagtggggaaaataggataagctaaaggcaaggagattctg |
123 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8726395 |
agtataagagaaaaagttgtacaaaaattattgcaaaatggttatataaatataatttctcgtggggaaaataggataagctaaaggcaaggagattctg |
8726494 |
T |
|
| Q |
124 |
agtcagcacgtatctattgaatcgcccattagataagtatttccgtgctttgcaaatcaacaaacacaattacaaccacggcttttttctatagtggaac |
223 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
8726495 |
agtcagcacgtatctatagaatcgcccattagataagtatttccgtgctctgcaaatcaacaaacacaattacaaccacggcttttttctatagtgggac |
8726594 |
T |
|
| Q |
224 |
ccacaaactccaccttcttcatataaaatgatgagcattctcattccaaaatcatagtaacttcttacaacgactttttcatcgcataacgaaacaaaca |
323 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8726595 |
ccacaaactccaccttcttcatataaaatgatgagcattctaattccaaaatcatagtaacttcttacaacga-----------cataacgaaacaaaca |
8726683 |
T |
|
| Q |
324 |
aacatgctctcttcaatatctcttccttcatctc |
357 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
8726684 |
aacatgctctcttcaatatctcttccttcttctc |
8726717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 36786269 - 36786321
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
36786269 |
agtatgagagagaaagttgtccaaaaattattgcaaaatggttggacaaatat |
36786321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 36581470 - 36581535
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||||| |||| |||||||| |||||| |||||| |
|
|
| T |
36581470 |
aatatgagtataagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttct |
36581535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 22920503 - 22920562
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
22920503 |
agtatgagagagaaagttgtccaaaatttgttacaaaatggttgtacaaatattatttct |
22920562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 2050980 - 2050928
Alignment:
| Q |
31 |
gagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||| ||||||||||||||||| || ||||||||||||| |||||| |||||| |
|
|
| T |
2050980 |
gagataaagttgtccaaaaattgttacaaaatggttgtacaaatatcatttct |
2050928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 6940160 - 6940220
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
6940160 |
agtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttct |
6940220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 20985540 - 20985599
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
20985540 |
agtatgagagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttct |
20985599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 41192647 - 41192588
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||| | ||||||| |||||| |||||| |||||| |
|
|
| T |
41192647 |
agtatgagagagaaagttgtcaaaaaattgtagcaaaatagttgtacaaatatcatttct |
41192588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 31708436 - 31708371
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||| || || |||||||||||| |||||| |||||| |
|
|
| T |
31708436 |
aatatgagtatgagagagaaagttgtcaaaaagttgttataaaatggttgtacaaatatcatttct |
31708371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 38501009 - 38500944
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| | ||||||||||||| ||||||| | ||||||||||||| |||||| |||||| |
|
|
| T |
38501009 |
aatatgagtatgaaagagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct |
38500944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 6758801 - 6758861
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||| |||||||| || |||||||||||| | |||| |||||| |
|
|
| T |
6758801 |
agtataagagagaaagttgtcacaaaaattgttagaaaatggttgtacatatatcatttct |
6758861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 18695379 - 18695319
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
18695379 |
agtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttct |
18695319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 36416080 - 36416132
Alignment:
| Q |
31 |
gagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||| ||||||| || |||||||||||| |||||| |||||| |
|
|
| T |
36416080 |
gagagaaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttct |
36416132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 25)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 43056776 - 43056724
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43056776 |
agtatgagagagaaagttgtccaaaaattattgcaaaatggttgtacaaatat |
43056724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 26501357 - 26501296
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| ||||||||||||| |||||| |||||| |
|
|
| T |
26501357 |
taagtatgagagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttct |
26501296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 39128464 - 39128411
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
39128464 |
agagagaaagttgtccaaaaattattgcaaaataattgtacaaatataatttct |
39128411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 47113334 - 47113277
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataattt |
81 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| ||||| |||||| |||| |
|
|
| T |
47113334 |
agtatgagagagaaagttgtccaaaaattattgcaaaatgattgtacaaatatcattt |
47113277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 3919360 - 3919301
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
3919360 |
agtatgagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttct |
3919301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 39815406 - 39815347
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||||| || | |||||||||||||| ||||||||||||| |
|
|
| T |
39815406 |
agtatgagagagaaagttgtccaaaagttgtagcaaaatggttgtacaaatataatttct |
39815347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 49621423 - 49621364
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
49621423 |
agtatgagagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcatttct |
49621364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 1156533 - 1156480
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
1156533 |
agagagaaagttgtcaaaaaattattgcaaaatgaatgtacaaatataatttct |
1156480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 43457836 - 43457889
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||| |||||| |||||| |
|
|
| T |
43457836 |
agagagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttct |
43457889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 7203855 - 7203914
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||| ||||||||||||| || |||||| |||||| |
|
|
| T |
7203855 |
agtatgagagagaaagttgtctaaaaattgttgcaaaatggttatacaaatatcatttct |
7203914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 11038314 - 11038263
Alignment:
| Q |
32 |
agagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
11038314 |
agagaaagttgtacaaaaattataccaaaatggttgtataaatatcatttct |
11038263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 27352690 - 27352631
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |
|
|
| T |
27352690 |
agtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttct |
27352631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 40605430 - 40605491
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||| ||||||| |||||| |||||| |
|
|
| T |
40605430 |
taagtataagagagaaagttgtctaaaaattatcaaaaaaaggttgtacaaatatcatttct |
40605491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 21433411 - 21433471
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||| ||||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
21433411 |
agtataagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttct |
21433471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 46281497 - 46281437
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| |||||| |||||| |||||| |||||| |
|
|
| T |
46281497 |
agtatgagagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttct |
46281437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 52437555 - 52437495
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| |||||||||||||| |||| |||||| |
|
|
| T |
52437555 |
agtatgagagagaaagttgtcacaaaaattattaaaaaatggttgtatatatatcatttct |
52437495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 16479990 - 16479955
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattat |
54 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16479990 |
atataattataagagagaaagttgtccaaaaattat |
16479955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 30530585 - 30530644
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| || | |||||||||||||||||||| |||||| |
|
|
| T |
30530585 |
agtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttct |
30530644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 32196698 - 32196647
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaata |
75 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||||| ||||||| ||||| |
|
|
| T |
32196698 |
agtatgagagagaaaattgtcaaaaaattattgcaaaagggttgtacaaata |
32196647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 51193142 - 51193201
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||||||| |||| |||||| |||||| |
|
|
| T |
51193142 |
agtatgagagagaaagttgtccaaaaattgttataaaatggatgtacaaatatcatttct |
51193201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 8757535 - 8757581
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
8757535 |
agagagaaagttgtccaaaaattatcataaaattgttgtataaatat |
8757581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 52078472 - 52078415
Alignment:
| Q |
26 |
tataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||| ||||||||| ||||| ||| ||| |||||||||||||||||||||| |
|
|
| T |
52078472 |
tataagagataaagttgtcaaaaaaatataataaagtggttgtataaatataatttct |
52078415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 36231717 - 36231777
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttcta |
84 |
Q |
| |
|
||||| ||||||||||||||| ||| ||| | ||||||||||||| |||||| ||||||| |
|
|
| T |
36231717 |
agtatgagagagaaagttgtctaaatattgtcacaaaatggttgtacaaatatcatttcta |
36231777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 49189214 - 49189278
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||| ||||| ||| ||||||||||| |||| || | |||||||||||||| |||||| |||||| |
|
|
| T |
49189214 |
atatgagtatgagaaagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct |
49189278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 50777434 - 50777486
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||| |||||||||||| |||||||||| | ||| |||||||||| |||||| |
|
|
| T |
50777434 |
agtatgagagagaaagttatccaaaaattgtcgcataatggttgtacaaatat |
50777486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 6239434 - 6239387
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatata |
77 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
6239434 |
agagagaaagttgtcaaaaaattattgcaaaatggttgtacaaatata |
6239387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 40258270 - 40258206
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||| |||||||||||| | |||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
40258270 |
atataagtatgagagagaaagttattcaaaaattatcataaaatggttgtataaatatcatttct |
40258206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 44170625 - 44170689
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
44170625 |
atataagtatgtgagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttct |
44170689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 18568826 - 18568885
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||| |||||||||||||| || | |||||||||||||||||||| |||||| |
|
|
| T |
18568826 |
agtataagagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttct |
18568885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 40721975 - 40722034
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||| |||| |||||| |||||| |
|
|
| T |
40721975 |
agtatgagagagaaagttgtccaaaaattattataaaatggatgtacaaatatcatttct |
40722034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 49768880 - 49768939
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||| ||||||||||| |||| |||||| |||||| |
|
|
| T |
49768880 |
agtatgagagagaaagttgtcaaaaaattgttgcaaaatggatgtacaaatatcatttct |
49768939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 53763822 - 53763881
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||||| || | |||||||| ||||| ||||||||||||| |
|
|
| T |
53763822 |
agtatgagagagaaagttgtccaaaagttgtagcaaaatgattgtacaaatataatttct |
53763881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 33484125 - 33484171
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
33484125 |
agagagaaagttgtccaaaaattatcacaaaatggttgtacaaatat |
33484171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 47998660 - 47998595
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
47998660 |
aatataagtatgagagaaaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttct |
47998595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 5466512 - 5466544
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaat |
62 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
5466512 |
agagagaaagttgtccaaaaattattgcaaaat |
5466544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 45779297 - 45779361
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||| ||||| ||| ||||||||||| ||||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
45779297 |
atatgagtatgagaaagaaagttgtcaaaaaattataacaaaatagttgtataaatatcatttct |
45779361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 47288143 - 47288083
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||||||| || ||||||||||||| |||||| |||||| |
|
|
| T |
47288143 |
agtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttct |
47288083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 8681001 - 8680942
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| || |||||||||| |||||| |||||| |
|
|
| T |
8681001 |
agtatgagagagaaagttgtccaaaaaatatcacataatggttgtacaaatatcatttct |
8680942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 9472524 - 9472583
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| ||||| |||||| |||||| |||||| |
|
|
| T |
9472524 |
agtatgagagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttct |
9472583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 29513707 - 29513766
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| || | |||||||||||||| |||||| |||||| |
|
|
| T |
29513707 |
agtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct |
29513766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 31318813 - 31318754
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||| | ||||||||||||| |||||| |||||| |
|
|
| T |
31318813 |
agtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttct |
31318754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 40629351 - 40629410
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||| ||||| |||||| |||||| |||||| |||||| |
|
|
| T |
40629351 |
agtatgagagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttct |
40629410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 44165969 - 44165910
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||| | ||||| |||||||| |||||| |||||| |
|
|
| T |
44165969 |
agtatgagagagaaagttgtcaaaaaattgtcgcaaagtggttgtacaaatatcatttct |
44165910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 45286126 - 45286185
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||| || |||||||||||||||| |||||| |||||| |
|
|
| T |
45286126 |
agtatgagagagaaagttgtctgaaagttgttgcaaaatggttgtacaaatatcatttct |
45286185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 51224849 - 51224908
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| || | |||||||||||||| |||||| |||||| |
|
|
| T |
51224849 |
agtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct |
51224908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 56025316 - 56025257
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| || | |||||||||||||| |||||| |||||| |
|
|
| T |
56025316 |
agtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct |
56025257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 149292 - 149357
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||||||||| ||||||| || ||| |||||||| |||||| |||||| |
|
|
| T |
149292 |
aatatgagtatgagagagaaagttgtcaaaaaattgttagaaattggttgtacaaatatcatttct |
149357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 1562541 - 1562606
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||| || || |||||||||||| |||||| |||||| |
|
|
| T |
1562541 |
aatatgagtatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct |
1562606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 20056450 - 20056397
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||||||| || ||| |||||| |||||| |||||| |
|
|
| T |
20056450 |
agagagaaagttgtccaaaaattataacataatagttgtacaaatatcatttct |
20056397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 29863613 - 29863552
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| | |||||||||||| ||||| |||| ||||||||||||| |||||| |||||| |
|
|
| T |
29863613 |
taagtatgaaagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttct |
29863552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 43358679 - 43358614
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| || || ||| |||||||| |||||| |||||| |
|
|
| T |
43358679 |
aatatgagtatgagagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct |
43358614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 44250232 - 44250297
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||| ||||||||||||| ||||||| || |||||||| | || |||||| |||||| |
|
|
| T |
44250232 |
aatatgagtataaaagagaaagttgtcaaaaaattgttacaaaatggatatacaaatatcatttct |
44250297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 53662445 - 53662498
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||| |||||||| || |||||| |||||| |||||| |||||| |
|
|
| T |
53662445 |
agagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttct |
53662498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 54251455 - 54251520
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| || |||||||||||| |||||||||| ||||| |||||| |||||| |||||| |
|
|
| T |
54251455 |
aatatgagtatgagggagaaagttgtcgaaaaattattaaaaaatagttgtacaaatatcatttct |
54251520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 34995381 - 34995321
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||| |||| |||| ||||| || || ||||||||||||| ||||||||||||| |
|
|
| T |
34995381 |
agtataagagaaaaagatgtcacaaaagttgttacaaaatggttgtacaaatataatttct |
34995321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 46844252 - 46844312
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttcta |
84 |
Q |
| |
|
||||| ||||||||||||||| ||||||| || |||||| |||||| | |||| ||||||| |
|
|
| T |
46844252 |
agtatgagagagaaagttgtcaaaaaattgttacaaaatagttgtacagatatcatttcta |
46844312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 49585055 - 49584995
Alignment:
| Q |
24 |
agtataagagagaaagttgtcc-aaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| |||||||| ||| |||||| |||||| |
|
|
| T |
49585055 |
agtatgagagagaaagttgtcccaaaaattattagaaaatggtcgtagaaatatcatttct |
49584995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 52911800 - 52911840
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatgg |
64 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
52911800 |
agtatgagagagaaaattgtcaaaaaattattgcaaaatgg |
52911840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 47056537 - 47056596
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||| | |||||| |||||| |
|
|
| T |
47056537 |
agtatgagagagaaagttgtccaaaaattgttgcaaaatggttgcacaaatatcatttct |
47056596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 49886749 - 49886695
Alignment:
| Q |
29 |
aagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||| |||||| |||||| |
|
|
| T |
49886749 |
aagagagaaagttgtctaaaaattatagcaaaatggttgtacaaatatcatttct |
49886695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 27646552 - 27646499
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||| |||||| |||||| |
|
|
| T |
27646552 |
agagataaagttgtccaaaaattattgcaaaatgattgtacaaatatcatttct |
27646499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 1834566 - 1834507
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||| | |||||||||||||| |||||| |||||| |
|
|
| T |
1834566 |
agtatgagagagaaagttgttcaaaaattgtagcaaaatggttgtacaaatattatttct |
1834507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 31176451 - 31176510
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||| |||||||| |||||| |||||| |
|
|
| T |
31176451 |
agtataagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttct |
31176510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 43409373 - 43409432
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| |||||||| |||||| |||||| |
|
|
| T |
43409373 |
agtataagagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcatttct |
43409432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 47141611 - 47141670
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
47141611 |
agtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct |
47141670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 35376556 - 35376621
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||||||||| ||||||| | ||||||||||||| |||||| |||||| |
|
|
| T |
35376556 |
aatatgagtatgagagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttct |
35376621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 39604263 - 39604316
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||| ||||||| ||| |||||||||||| |||||| |||||| |
|
|
| T |
39604263 |
agagagaaagttgtcaaaaaattgttgaaaaatggttgtacaaatatcatttct |
39604316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 52100323 - 52100262
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| | |||||||||||| ||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
52100323 |
taagtatgaaagagaaagttgtacaaaaattattaaaaaatggttgtacaaatatcatttct |
52100262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 9557933 - 9557992
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||| | |||||| ||||||||||||| |||||| |
|
|
| T |
9557933 |
agtatgagagagaaagttgtacaaaaattgtatcaaaattgttgtataaatatcatttct |
9557992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 41369651 - 41369600
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataattt |
81 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||| |||||| |||| |
|
|
| T |
41369651 |
agagagaaagttgtcaaaaaattattagaaaatggttgtacaaatatcattt |
41369600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 41877748 - 41877689
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| || | |||||||||||||| |||||| |||||| |
|
|
| T |
41877748 |
agtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct |
41877689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 47849724 - 47849673
Alignment:
| Q |
32 |
agagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
47849724 |
agagaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttct |
47849673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 50025709 - 50025768
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| ||||| |||| ||||||||||||| |||||| |||||| |
|
|
| T |
50025709 |
agtatgagagagaaagttgtacaaaatttataccaaaatggttgtacaaatatcatttct |
50025768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 53932402 - 53932461
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||| |||||||||||||||||| | ||||||||||||| |||||| |||||| |
|
|
| T |
53932402 |
agtatgagagtgaaagttgtccaaaaattgtcacaaaatggttgtacaaatatcatttct |
53932461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 27168686 - 27168752
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||||||||| ||||||||||| ||||||||||| |||||| |||||| |
|
|
| T |
27168686 |
aatatgagtatgagagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttct |
27168752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7351643 - 7351708
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||| |||| |||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
7351643 |
aatatgagtatgagagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttct |
7351708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 12792696 - 12792639
Alignment:
| Q |
26 |
tataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||| ||||||| | |||| |||||||| |||||| |||||| |
|
|
| T |
12792696 |
tataagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct |
12792639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 14992133 - 14992080
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatata |
77 |
Q |
| |
|
||||| |||||||||||| || ||||||| | |||||||||||||| ||||||| |
|
|
| T |
14992133 |
agtatgagagagaaagttatcaaaaaattgtagcaaaatggttgtacaaatata |
14992080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 16267902 - 16267967
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| |||||||||||||| ||||||||||| |||||| || || |||||| |||||| |
|
|
| T |
16267902 |
aatatgagtatgagagagaaagttgttcaaaaattattagaaaatgattatacaaatatcatttct |
16267967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 25559758 - 25559705
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
25559758 |
agagagaaagttgtataaaaattataccaaaatggttgtacaaatatcatttct |
25559705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 37754501 - 37754448
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| | |||| |||||| |||||| |
|
|
| T |
37754501 |
agagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttct |
37754448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 49761203 - 49761256
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||||| |||||| |||||| |
|
|
| T |
49761203 |
agagagaaagttgtacaaaaattgttagaaaatggttgtacaaatatcatttct |
49761256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 27162480 - 27162532
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||| |||||||||||||| ||||| || || ||||||||||||| |||||| |
|
|
| T |
27162480 |
agtatgagagagaaagttgttcaaaagttgttacaaaatggttgtacaaatat |
27162532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 29573366 - 29573426
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
29573366 |
agtatgagagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttct |
29573426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 41348989 - 41349041
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||||| | ||||||||||| ||||||||| ||||||||||||| |||||| |
|
|
| T |
41348989 |
agtataaaaaagaaagttgtctaaaaattatcacaaaatggttgtacaaatat |
41349041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 27102181 - 27102116
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||| ||| ||||| |||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
27102181 |
aatataagtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttct |
27102116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 27144003 - 27143938
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||| ||| ||||| |||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
27144003 |
aatataagtataagagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttct |
27143938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 16743277 - 16743336
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
16743277 |
agtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttct |
16743336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 1376425 - 1376365
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||| ||||| || || |||||||||||| ||||||||||||| |
|
|
| T |
1376425 |
agtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatataatttct |
1376365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 1384173 - 1384113
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||| ||||| || || |||||||||||| ||||||||||||| |
|
|
| T |
1384173 |
agtataagagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatataatttct |
1384113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 21911169 - 21911217
Alignment:
| Q |
33 |
gagaaagttgtccaaaaattattgcaaaatggttgtataaatataattt |
81 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
21911169 |
gagagagttgtccaaaaattattctaaaatggttgtataaatattattt |
21911217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 25924875 - 25924934
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| || | |||||||||||||| |||||| |||||| |
|
|
| T |
25924875 |
agtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct |
25924934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 26668556 - 26668497
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||| || || ||||||||| |||||||| ||||| |||||| |||||| |
|
|
| T |
26668556 |
agtataagagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttct |
26668497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 34570605 - 34570663
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataattt |
81 |
Q |
| |
|
||||| ||||||||||||||| ||||| ||||| ||||||||||||| |||||| |||| |
|
|
| T |
34570605 |
agtatgagagagaaagttgtcacaaaagttattacaaaatggttgtacaaatatcattt |
34570663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 38504235 - 38504171
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||| ||||| ||||||||||||||| ||||||| | |||||||||||||| |||||| |||||| |
|
|
| T |
38504235 |
atatgagtattagagagaaagttgtcaaaaaattgtagcaaaatggttgtacaaatatcatttct |
38504171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 14548834 - 14548893
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
14548834 |
agtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttct |
14548893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 42131050 - 42130999
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataattt |
81 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||||||||||| |||| |
|
|
| T |
42131050 |
agagagaaagttgtccaaaagttgttgcagaatggttgtataaatatcattt |
42130999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3650179 - 3650114
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||||||| |||| |||||||| |||||| |||||| |
|
|
| T |
3650179 |
aatatgagtatgagagagaaagttgttaaaaaattattacaaattggttgtacaaatatcatttct |
3650114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 11114686 - 11114739
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||| |||| |||||| |||||| |
|
|
| T |
11114686 |
agagagaaagttgtcaaaaagttattgcaaaatggatgtacaaatatcatttct |
11114739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 24116102 - 24116041
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| ||| ||||||||||| ||||||| |||||||||| |||| ||||||||||||| |
|
|
| T |
24116102 |
taagtatgagaaagaaagttgtcaaaaaattgttgcaaaatgaatgtacaaatataatttct |
24116041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 28156265 - 28156204
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| |||||||||||||| |||||||| | ||||||||||||| |||||| |||||| |
|
|
| T |
28156265 |
taagtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttct |
28156204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 35937529 - 35937582
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
35937529 |
agagagaaagttgtccaaaagttgttacaaaatggttgtacaaatatcatttct |
35937582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 10344384 - 10344325
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| | |||| |||||| |||||| |
|
|
| T |
10344384 |
agtatgagagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttct |
10344325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 29509326 - 29509267
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| || | |||||||||||||| |||||| |||||| |
|
|
| T |
29509326 |
agtatgagagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct |
29509267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 32674243 - 32674302
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| ||||| |||| ||||||||||||| |||||| |||||| |
|
|
| T |
32674243 |
agtatgagagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttct |
32674302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 6849477 - 6849538
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| || |||||||||||| | ||||| ||||||| |||||||| |||||| |||||| |
|
|
| T |
6849477 |
taagtatgagggagaaagttgtcaacaaattgttgcaaattggttgtacaaatatcatttct |
6849538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7814597 - 7814662
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||| || ||||||||| || |||||| |||||| |
|
|
| T |
7814597 |
aatatgagtataagagagaaagttgtcacaaaattgttaaaaaatggttctaaaaatatcatttct |
7814662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 31806353 - 31806300
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||| ||||||| || |||||||||||| |||||| |||||| |
|
|
| T |
31806353 |
agagagaaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttct |
31806300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37784379 - 37784444
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||| |||| ||||| |||| ||||||||||||| |||||| |||||| |
|
|
| T |
37784379 |
aatatgagtatgagagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttct |
37784444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 44712040 - 44711979
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||||| |||| | |||||||||||| |||||| |
|
|
| T |
44712040 |
taagtatgagagagaaaattgtcaaaaaattattacaaattaattgtataaatatcatttct |
44711979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 30927937 - 30928001
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||| | |||| |||||||| |||||| |||||| |
|
|
| T |
30927937 |
atatgagtatgagagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttct |
30928001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 42786670 - 42786730
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||| |||||||| | |||||||||||| |||||| |||||| |
|
|
| T |
42786670 |
agtataagagagaaagttgtcacaaaaattgtaagaaaatggttgtacaaatatcatttct |
42786730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 1298259 - 1298195
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||||||| ||||||||||| || |||||| |||||| |
|
|
| T |
1298259 |
atataagtatgagagagaaaattgtcaaaaaattatagcaaaatggttctacaaatatcatttct |
1298195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 34373065 - 34373005
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttcta |
84 |
Q |
| |
|
||||| |||||||||||||| |||||||||| ||||||||||||| |||||| ||||||| |
|
|
| T |
34373065 |
agtatgagagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttcta |
34373005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 9695072 - 9695131
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||||||| || |||||||||| |||||| |||||| |
|
|
| T |
9695072 |
agtatgagagagaaagttgtccaaaaattatctcataatggttgtacaaatatcatttct |
9695131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 13850195 - 13850254
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |
|
|
| T |
13850195 |
agtatgagagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcatttct |
13850254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 29192656 - 29192719
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataattt |
81 |
Q |
| |
|
||||||||||||||||||||| || || |||||||||| |||||||||||| |||||| |||| |
|
|
| T |
29192656 |
aatataagtataagagagaaaattatcaaaaaattattaaaaaatggttgtacaaatatcattt |
29192719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 44484667 - 44484726
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||| || ||||||||||||| |||||| |||||| |
|
|
| T |
44484667 |
agtatgagagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttct |
44484726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 6328721 - 6328668
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
6328721 |
agagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct |
6328668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 13553213 - 13553148
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| ||||||||| ||||||||||||||| |||| |||||||| |||||| |||||| |
|
|
| T |
13553213 |
aatatgagtatgagagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttct |
13553148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 12784409 - 12784469
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
12784409 |
agtatgagagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttct |
12784469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 26290861 - 26290921
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
26290861 |
agtataagagagaaggttatcacaaaaattattaaaaaatggttgtacaaatataatttct |
26290921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 33559691 - 33559640
Alignment:
| Q |
32 |
agagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |||||| |||||| |
|
|
| T |
33559691 |
agagaaagttgtccaaaaattatactaaaatggttgtacaaatatcatttct |
33559640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 2842891 - 2842944
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatat |
76 |
Q |
| |
|
||||| ||||||||||||||| | ||||||||| ||||||||||||| |||||| |
|
|
| T |
2842891 |
agtatgagagagaaagttgtcaccaaaattattacaaaatggttgtacaaatat |
2842944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 5954500 - 5954553
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||||||||| |||| || |||||||||| |||||| |||||| |
|
|
| T |
5954500 |
agagagaaagttgtccaaaagttatcacataatggttgtacaaatatcatttct |
5954553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 9384441 - 9384376
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||||||| ||||| |||||| |||||| |||||| |
|
|
| T |
9384441 |
aatatgagtatgagagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcatttct |
9384376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 39737695 - 39737756
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| |||||||||||||||||||| || || ||| |||||||| |||||| |||||| |
|
|
| T |
39737695 |
taagtatgagagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct |
39737756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 5031984 - 5031924
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
5031984 |
agtatgagagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttct |
5031924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 36909861 - 36909913
Alignment:
| Q |
31 |
gagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||| || | ||||||||||||| |||||| |||||| |
|
|
| T |
36909861 |
gagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttct |
36909913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 40326184 - 40326128
Alignment:
| Q |
27 |
ataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||| ||||| ||||||| | ||| |||||||||||||||| |||||| |
|
|
| T |
40326184 |
ataagagagaaaattgtcaaaaaattgtgacaacatggttgtataaatatcatttct |
40326128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0291
Description:
Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 20129 - 20070
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||| | | ||||||| |||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
20129 |
agtataagaaaaatagttgtcaaaaaattattacaaaatggttgtaaaaatataatttct |
20070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 28081793 - 28081852
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||||| ||||||||||||| |||||| |||||| |
|
|
| T |
28081793 |
agtatgagagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttct |
28081852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 42060716 - 42060657
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||| |||| |||||||||||||| |||||| |||||| |
|
|
| T |
42060716 |
agtatgagagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttct |
42060657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 43079643 - 43079702
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||| |||||||| |||||| |||||| |
|
|
| T |
43079643 |
agtatgagagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttct |
43079702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 30941244 - 30941179
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||| || ||||||| || |||| |||||||| |||||| |||||| |
|
|
| T |
30941244 |
aatatgagtataagagagaaagttatctaaaaattgttacaaagtggttgtacaaatatcatttct |
30941179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 40077308 - 40077255
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||| ||||||| || |||||| |||||| ||||||||||||| |
|
|
| T |
40077308 |
agagagaaagttgtctaaaaattgttacaaaatagttgtacaaatataatttct |
40077255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 46829540 - 46829480
Alignment:
| Q |
24 |
agtataagagagaaagttgtc-caaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| |||||||| || ||||||||||||| |||||| |||||| |
|
|
| T |
46829540 |
agtatgagagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttct |
46829480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 2790237 - 2790178
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||| || |||| |||||||| |||||| |||||| |
|
|
| T |
2790237 |
agtatgagagagaaagttgtcaaaaaattgttacaaagtggttgtacaaatatcatttct |
2790178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 33881716 - 33881775
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||| || |||| |||| |||||||||||||||||||| |||||| |
|
|
| T |
33881716 |
agtatgagagagaaagttatcaaaaagttataccaaaatggttgtataaatatcatttct |
33881775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 38023435 - 38023494
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||| ||||||||| |||| |||||||| |||||| |||||| |
|
|
| T |
38023435 |
agtatgagagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttct |
38023494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 41798282 - 41798221
Alignment:
| Q |
22 |
taagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||||| ||||| |||||||||||| |||||| |
|
|
| T |
41798282 |
taagtatgagagagaaaattgtctaaaaattatttaaaaattattgtataaatatcatttct |
41798221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 42276157 - 42276092
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||||||| || ||||||| || ||||| |||||| |||||| |||||| |
|
|
| T |
42276157 |
aatatgagtataagagagaaagttatcaaaaaattgttagaaaatagttgtacaaatatcatttct |
42276092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 29763895 - 29763831
Alignment:
| Q |
19 |
atataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||| ||||| ||| |||||||||| ||||| |||| ||||||||||||| |||||| |||||| |
|
|
| T |
29763895 |
atatgagtatgagaaagaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttct |
29763831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0651 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0651
Description:
Target: scaffold0651; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 4857 - 4916
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| |||||||||||||| |||||||| | ||||||||||||| |||||| |||||| |
|
|
| T |
4857 |
agtatgagagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttct |
4916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 2237 - 2296
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||| || || ||||||||| |||||||| ||||| |||||| |||||| |
|
|
| T |
2237 |
agtataagagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttct |
2296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 36062 - 36003
Alignment:
| Q |
24 |
agtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||| | |||||| |||||| |||||| |
|
|
| T |
36062 |
agtataagagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttct |
36003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 5134 - 5084
Alignment:
| Q |
31 |
gagagaaagttgtccaaaaattattgcaaaatggttgtataaatataattt |
81 |
Q |
| |
|
|||||||||||||| ||||||| || |||||| ||||||||||||||||| |
|
|
| T |
5134 |
gagagaaagttgtctaaaaattgttataaaatgattgtataaatataattt |
5084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0687 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0687
Description:
Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 7126 - 7061
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||| || ||||||||| || |||||| |||||| |
|
|
| T |
7126 |
aatatgagtataagagagaaagttgtcacaaaattgttaaaaaatggttctaaaaatatcatttct |
7061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 72420 - 72367
Alignment:
| Q |
30 |
agagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||||| |||| ||||| || |||||||||||||||| |||||| |||||| |
|
|
| T |
72420 |
agagagaaaattgttcaaaagttgttgcaaaatggttgtacaaatatcatttct |
72367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 5075 - 5140
Alignment:
| Q |
18 |
aatataagtataagagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
||||||| ||| |||||||||||||| |||||||| | ||||||||| ||||||||| |||||| |
|
|
| T |
5075 |
aatataaatatgagagagaaagttgtacaaaaattctataaaaatggttatataaatatcatttct |
5140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 72187 - 72239
Alignment:
| Q |
31 |
gagagaaagttgtccaaaaattattgcaaaatggttgtataaatataatttct |
83 |
Q |
| |
|
|||||||||||||| |||| || || ||||||||||||| |||||| |||||| |
|
|
| T |
72187 |
gagagaaagttgtctaaaagttgttacaaaatggttgtacaaatatcatttct |
72239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University