View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2802_high_1 (Length: 827)

Name: NF2802_high_1
Description: NF2802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2802_high_1
NF2802_high_1
[»] chr8 (6 HSPs)
chr8 (1-623)||(39977214-39977839)
chr8 (609-811)||(39976998-39977198)
chr8 (387-469)||(41440571-41440653)
chr8 (368-443)||(19437451-19437526)
chr8 (368-443)||(19573600-19573675)
chr8 (17-72)||(33624244-33624299)
[»] chr4 (3 HSPs)
chr4 (312-469)||(38230331-38230488)
chr4 (312-470)||(34488330-34488488)
chr4 (235-264)||(52583297-52583326)
[»] chr3 (3 HSPs)
chr3 (314-469)||(53195676-53195831)
chr3 (372-523)||(22341298-22341449)
chr3 (453-521)||(46693034-46693103)
[»] chr5 (2 HSPs)
chr5 (339-469)||(37255904-37256034)
chr5 (225-273)||(37254572-37254620)
[»] chr1 (4 HSPs)
chr1 (347-499)||(33851029-33851181)
chr1 (347-499)||(33942797-33942949)
chr1 (311-458)||(35480609-35480747)
chr1 (453-499)||(46209451-46209497)
[»] chr7 (3 HSPs)
chr7 (339-496)||(28087555-28087711)
chr7 (311-523)||(44255539-44255751)
chr7 (345-458)||(33735119-33735219)
[»] chr2 (1 HSPs)
chr2 (312-499)||(35606838-35607026)
[»] scaffold0210 (2 HSPs)
scaffold0210 (311-469)||(19989-20143)
scaffold0210 (311-469)||(27881-28035)


Alignment Details
Target: chr8 (Bit Score: 411; Significance: 0; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 1 - 623
Target Start/End: Complemental strand, 39977839 - 39977214
Alignment:
Q  1 accagcaccgacgttgtttcttcttccggcagcatcaattctattccaaagaatctgtttagatgcagatgctgcaacttcacaatcggagcaatttttt 100  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |    
T  39977839 accagcaccggcgttgtttcttcttccggcagcatcatttctattccaaagaatctgtttagatgcagattttgcaacttcacaatcggagcaattttgt 39977740  T
Q  101 cgacaaccaccgcgtcgaagttctggaaaacagccacgccggaaacgccggagatatactctgtgattaatgttgttagaaactggaaacagagaattgg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||         ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39977739 cgacaaccaccgcgccgaagttctggaaaacagccacgccgga---------gatatactctgtgataaatgttgttagaaactggaaacagagaattgg 39977649  T
Q  201 ataaaaattccaaatcgtatgatggttgtggttgtcatcatgctttcagaaaaattgcagccaacggtggtggtggatttagaaactggaaatctgcaat 300  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39977648 ataaaagttccaaatcgtatgatggttgtggttgtcatcatgctttcagaaaaattgcagccaatggtggtggtggatttagaaactggaaatctgcaat 39977549  T
Q  301 tgttttgtggg------------agaagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgat 388  Q
    |||||||||||            |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39977548 tgttttgtgggggtgaagagaagagaagaagaaatggggtttattagaccgaaggaacacaataacacttgtattgaatcttttaatcttgaccgctgat 39977449  T
Q  389 ttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaacaggagggggctactgagt 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| || |||||||||||||||    
T  39977448 ttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattcaataatagcctttgttcggatcaaaatagaagggggctactgagt 39977349  T
Q  489 tgcaaaaggggtaaagttggcgcgctggaaagtgannnnnnnnnaatagtgggacaaaattgctacagaaccaaacacaggaagcaaaaattgcatttta 588  Q
    |||||||||||||||||||| |||||| ||||||          ||||| | ||||||||||||||||| ||||||| ||   | ||||| |||||||||    
T  39977348 tgcaaaaggggtaaagttggggcgctgaaaagtggtttttttttaatagggagacaaaattgctacagagccaaacatagagggtaaaaaatgcatttta 39977249  T
Q  589 gtcttacaagtatcactcataacataagacattat 623  Q
      |||||||||||||||||||||||||| ||||||    
T  39977248 accttacaagtatcactcataacataagtcattat 39977214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 609 - 811
Target Start/End: Complemental strand, 39977198 - 39976998
Alignment:
Q  609 aacataagacattatatttcttttttagtttataatgataggaaataaaacaagactacnnnnnnngaatggtaaatcttagtaatttgttgttagannn 708  Q
    |||||||| ||||||||||| |||||||||||| ||||||| ||||||||||| |||||        ||||||||||||||||||||||||||||||       
T  39977198 aacataagtcattatatttcctttttagtttatgatgatagtaaataaaacaatactactttttt--aatggtaaatcttagtaatttgttgttagattt 39977101  T
Q  709 nnnnnnctctctatcgagtttgaactcaaaatttgcaacnnnnnnn-actctttgtttaaatcatttgagttatccaacctttaaaagaacactatttaa 807  Q
          |||||| || |||||||||||| ||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  39977100 ttttt-ctctctgtcaagtttgaactcagaatttgcaacttttttttactctttatttaaatcatttgagttatccaacctttaaaagaacactacttaa 39977002  T
Q  808 taat 811  Q
    ||||    
T  39977001 taat 39976998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 387 - 469
Target Start/End: Complemental strand, 41440653 - 41440571
Alignment:
Q  387 atttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaa 469  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||||    
T  41440653 atttaatcctaaggctattaattattcctatcattcttttccatttaaatttaattcaataataacctttgacttggtcaaaa 41440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 19437526 - 19437451
Alignment:
Q  368 cttttaatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattc 443  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  19437526 cttttaatcttgaccactaatttaatcctaacgctattaattattcctatcattcttttccatttaaatttaattc 19437451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 368 - 443
Target Start/End: Complemental strand, 19573675 - 19573600
Alignment:
Q  368 cttttaatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattc 443  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  19573675 cttttaatcttgaccactaatttaatcctaacgctattaattattcctatcattcttttccatttaaatttaattc 19573600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 33624244 - 33624299
Alignment:
Q  17 tttcttcttccggcagcatcaattctattccaaagaatctgtttagatgcagatgc 72  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  33624244 tttcttcttcctgcagcatcaattccattccaaagaatctgtttagatgcagatgc 33624299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 1e-52; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 312 - 469
Target Start/End: Original strand, 38230331 - 38230488
Alignment:
Q  312 agaagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattat 411  Q
    |||||||||||||||||||||| ||  ||||| ||||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  38230331 agaagaagaaatggggtttattagaaagaagggacacaataacacttacattgaatcttttaatgttgaccattgatttaatcctaaggctattaattat 38230430  T
Q  412 tcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaa 469  Q
    || |||||||||||||||||||||||||||| | ||||||||||||| | ||||||||    
T  38230431 tcttatcattctttttcatttaaatttaatttagtaatagcctttgatcaggtcaaaa 38230488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 312 - 470
Target Start/End: Original strand, 34488330 - 34488488
Alignment:
Q  312 agaagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattat 411  Q
    ||||||||||||| |||||||| ||  ||||  ||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||    
T  34488330 agaagaagaaatgaggtttattagatagaagagacacaataacacttatattgagtcttttaatctcgaccattgatttaatcctaaggctattaattat 34488429  T
Q  412 tcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaac 470  Q
    |||||||||||||||  |||||||||||||| || ||||| ||| |||||| |||||||    
T  34488430 tcctatcattcttttcaatttaaatttaatttaagaatagtcttggaccggatcaaaac 34488488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 235 - 264
Target Start/End: Complemental strand, 52583326 - 52583297
Alignment:
Q  235 tcatcatgctttcagaaaaattgcagccaa 264  Q
    ||||||||||||||||||||||||||||||    
T  52583326 tcatcatgctttcagaaaaattgcagccaa 52583297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 1e-46; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 314 - 469
Target Start/End: Complemental strand, 53195831 - 53195676
Alignment:
Q  314 aagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattattc 413  Q
    ||||||||||| ||||| |||||  ||||  ||| ||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||    
T  53195831 aagaagaaatgaggttttttggatagaagatacagaataacacttatattgagtcttttaatcttgaccactcatttaatcctaaggctattaattattc 53195732  T
Q  414 ctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaa 469  Q
    |||||||||||||  |||| ||||||||||||||||||  ||||||||||||||||    
T  53195731 ctatcattcttttcaatttcaatttaattcaataatagtttttgaccgggtcaaaa 53195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 372 - 523
Target Start/End: Complemental strand, 22341449 - 22341298
Alignment:
Q  372 taatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaaca 471  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |  | | |||||||||||||||||||      
T  22341449 taatcttgaccactaatttaatcctaaggctattaattattcctatcatt-ttttccatttaaatttaattaacaagtggcctttgaccgggtcaaaatt 22341351  T
Q  472 ggagggggctactgagttgc-aaaaggggtaaagttggcgcgctggaaagtga 523  Q
      ||||||||  ||| |||| ||||||||| ||||| | | ||||||||||||    
T  22341350 atagggggcttatgaattgcaaaaaggggtgaagttagggggctggaaagtga 22341298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 521
Target Start/End: Complemental strand, 46693103 - 46693034
Alignment:
Q  453 ctttgaccgggtcaaaacaggagggggctactgagttgcaaa-aggggtaaagttggcgcgctggaaagt 521  Q
    |||||||||||| |||| ||||||||| |||||||||||||| |||||| ||||||| | || |||||||    
T  46693103 ctttgaccgggttaaaataggagggggttactgagttgcaaacaggggtgaagttggggggcaggaaagt 46693034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 5e-46; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 339 - 469
Target Start/End: Original strand, 37255904 - 37256034
Alignment:
Q  339 gaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaattt 438  Q
    ||||||||||||||||||||||||||| | ||||||| |||||| ||||||||||||||| |||||||||||||  |||||||||||| |||||||||||    
T  37255904 gaaggaacacaataacacttatattgagttttttaattttgaccactgatttaatcctaatgctattaattattgatatcattcttttccatttaaattt 37256003  T
Q  439 aattcaataatagcctttgaccgggtcaaaa 469  Q
    |||||||||||||||||||||| ||||||||    
T  37256004 aattcaataatagcctttgacctggtcaaaa 37256034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 37254572 - 37254620
Alignment:
Q  225 gttgtggttgtcatcatgctttcagaaaaattgcagccaacggtggtgg 273  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  37254572 gttgtggttgtcatcgtgctttcagaaaaattgcagccaatggtggtgg 37254620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 8e-45; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 347 - 499
Target Start/End: Complemental strand, 33851181 - 33851029
Alignment:
Q  347 acaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattcaat 446  Q
    ||||||||||| | ||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  33851181 acaataacactaaaattgaatctttaaaacttgaccactgatttaatcctaaggctattaattatttctatcattcttttccatttaaatttaattcaat 33851082  T
Q  447 aatagcctttgaccgggtcaaaacaggagggggctactgagttgcaaaagggg 499  Q
    |||||||||||||  ||||||||   ||||||||   ||||||||||||||||    
T  33851081 aatagcctttgacttggtcaaaattagagggggcctatgagttgcaaaagggg 33851029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 347 - 499
Target Start/End: Original strand, 33942797 - 33942949
Alignment:
Q  347 acaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattcaat 446  Q
    ||||||||||| | ||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  33942797 acaataacactaaaattgaatctttaaaacttgaccactgatttaatcctaaggctattaattatttctatcattcttttccatttaaatttaattcaat 33942896  T
Q  447 aatagcctttgaccgggtcaaaacaggagggggctactgagttgcaaaagggg 499  Q
    |||||||||||||  ||||||||   ||||||||   ||||||||||||||||    
T  33942897 aatagcctttgacttggtcaaaattagagggggcctatgagttgcaaaagggg 33942949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 311 - 458
Target Start/End: Original strand, 35480609 - 35480747
Alignment:
Q  311 gagaagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaatta 410  Q
    ||||||||||||||  ||||||| ||  ||||||||||||||||||||  ||||| ||||||||||||||||        ||||||||||||||||||||    
T  35480609 gagaagaagaaatgatgtttattagattgaaggaacacaataacacttgaattgagtcttttaatcttgacc--------aatcctaaggctattaatta 35480700  T
Q  411 ttcctatcattctttttcatttaaatttaattcaataatagcctttga 458  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  35480701 ttcctatcatt-tttttcatttaaatttaattcaataatagccattga 35480747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 499
Target Start/End: Original strand, 46209451 - 46209497
Alignment:
Q  453 ctttgaccgggtcaaaacaggagggggctactgagttgcaaaagggg 499  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||    
T  46209451 ctttgacccggtcaaaataggagggggccactgagttgcaaaagggg 46209497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 5e-43; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 339 - 496
Target Start/End: Original strand, 28087555 - 28087711
Alignment:
Q  339 gaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaattt 438  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||| |||||||||||    
T  28087555 gaaggaatacaataacacttaaattgagtcttttaatcttgaccactgatttaaccctaagggtattaattattcctatcatt-ttttccatttaaattt 28087653  T
Q  439 aattcaataatagcctttgaccgggtcaaaacaggagggggctactgagttgcaaaag 496  Q
    |||| |||||||||||||||| |||||||||   ||||||||   |||||||||||||    
T  28087654 aatttaataatagcctttgactgggtcaaaattagagggggcctatgagttgcaaaag 28087711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 311 - 523
Target Start/End: Complemental strand, 44255751 - 44255539
Alignment:
Q  311 gagaagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaatta 410  Q
    |||||||||||||  |||||||| ||  ||||||||| |||||||| |  | ||| ||||  |||||| ||| || |||||||||||| | |||||||||    
T  44255751 gagaagaagaaataaggtttattagaatgaaggaacaaaataacaccttaactgagtcttaaaatctttaccactaatttaatcctaaagttattaatta 44255652  T
Q  411 ttcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaacaggagggggctactgagttgcaaaaggggtaaagttggcg 510  Q
    || |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||   ||||| ||   ||| ||||||||||||  ||||| | |    
T  44255651 tttctatcatttttttccatttaaatttaattcaatgatagcctttgaccgggtcaaaattagagggagcatatgaattgcaaaagggggtaagttaggg 44255552  T
Q  511 cgctggaaagtga 523  Q
     ||||||||||||    
T  44255551 ggctggaaagtga 44255539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 33735219 - 33735119
Alignment:
Q  345 acacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaattattcctatcattctttttcatttaaatttaattca 444  Q
    ||||||||||||| ||||| | | |||||||||||||| ||||||||||||             ||||||||||||| ||||| ||||||||||||||||    
T  33735219 acacaataacactcatattcagtgttttaatcttgacccctgatttaatcc-------------tattcctatcattattttttatttaaatttaattca 33735133  T
Q  445 ataatagcctttga 458  Q
    ||||||||||||||    
T  33735132 ataatagcctttga 33735119  T

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Target: chr2 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 312 - 499
Target Start/End: Original strand, 35606838 - 35607026
Alignment:
Q  312 agaagaagaaatggggtt-tattggaccg-aaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaatt 409  Q
    |||||||||||||||||| ||||| || | |||||||| |||||||||| |||||| |||||||||||| ||| |||||||||| |||||||||||||||    
T  35606838 agaagaagaaatggggttatattgcactgcaaggaacataataacacttgtattgagtcttttaatcttaaccactgatttaattctaaggctattaatt 35606937  T
Q  410 attcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaacaggagggggctactgagttgcaaaagggg 499  Q
    |||| | |||||||||| |||||||||| |||| |||||||| |||||| ||| ||||||   |||||| ||| ||||||||||||||||    
T  35606938 attcttgtcattcttttccatttaaattgaattaaataatagtctttgatcggatcaaaatcagaggggtcta-tgagttgcaaaagggg 35607026  T

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Target: scaffold0210 (Bit Score: 77; Significance: 3e-35; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 311 - 469
Target Start/End: Original strand, 19989 - 20143
Alignment:
Q  311 gagaagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaatta 410  Q
    |||||||||||||| |||||||| ||| ||||| |||||||||||||||||  || ||||| ||||||||||    ||||||| ||||| ||||||||||    
T  19989 gagaagaagaaatgaggtttattagacagaagggacacaataacacttataccgagtcttt-aatcttgacca---atttaattctaagactattaatta 20084  T
Q  411 ttcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaa 469  Q
    ||||||| | | |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  20085 ttcctataaatatttttcatttaaatttaattcaataataacctttgatcgggtcaaaa 20143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 311 - 469
Target Start/End: Original strand, 27881 - 28035
Alignment:
Q  311 gagaagaagaaatggggtttattggaccgaaggaacacaataacacttatattgaatcttttaatcttgaccgctgatttaatcctaaggctattaatta 410  Q
    |||||||||||||| |||||||| ||| ||||| |||||||||||||||||  || ||||| ||||||||||    ||||||| ||||| ||||||||||    
T  27881 gagaagaagaaatgaggtttattagacagaagggacacaataacacttataccgagtcttt-aatcttgacca---atttaattctaagactattaatta 27976  T
Q  411 ttcctatcattctttttcatttaaatttaattcaataatagcctttgaccgggtcaaaa 469  Q
    ||||||| | | |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  27977 ttcctataaatatttttcatttaaatttaattcaataataacctttgatcgggtcaaaa 28035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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