View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2802_low_9 (Length: 207)
Name: NF2802_low_9
Description: NF2802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2802_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 267334 - 267510
Alignment:
| Q |
18 |
caaattaatcttgctttaccaaaaacgaaaagcgcaatttgtccaagccaggttgttcacttcgtggtgtgctataattatctctctatcatatcatatc |
117 |
Q |
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| T |
267334 |
caaattaatcttgctttaccaaaaacgaaaagcgcaatttgtccaagccaggttgttcacttcttggtgtgctataattatctctctatcatatcatatc |
267433 |
T |
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| Q |
118 |
atgtcaatcacagtgaagcaaacacaatgtcaagttcaaagtccaacctacactcacgctacgctcgccacaggttc |
194 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
267434 |
atgtcaatcacaatgaagcaaacacaatgtcaagttcaaagtccaacctacactcacgctacgctcgccacaagttc |
267510 |
T |
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