View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2804_low_14 (Length: 274)
Name: NF2804_low_14
Description: NF2804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2804_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 81 - 240
Target Start/End: Complemental strand, 9770027 - 9769867
Alignment:
| Q |
81 |
cattcttttgttcaatgtgtgttacaattacaaattccgataattcctttttt-gttgggattggaatagctgaaaatgggtgaatggtcctcacaaaac |
179 |
Q |
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| T |
9770027 |
cattcttttgttcaatgtgtgttacaattacaaattccgataattcctttttttgttgggattggaatagctgaaaatgggtgaatggtcctcacaaaac |
9769928 |
T |
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| Q |
180 |
attgtttttgtctttatgtacaaaagcaataaatgtgtatgtttgaactggtttggtgttt |
240 |
Q |
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| T |
9769927 |
attgtttttgtctttatgtacaaaagcaataaatgtgtatgtttgaactggtttggtgttt |
9769867 |
T |
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