View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2806_high_8 (Length: 242)
Name: NF2806_high_8
Description: NF2806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2806_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 44750329 - 44750562
Alignment:
| Q |
1 |
tattttaattagtcaaatcctttcaagagtcaaatattcatgcaggtcctcttt---------ttctatatattaccataaagaggggttttgtttgaaa |
91 |
Q |
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| T |
44750329 |
tattttaattagtcaaatcctttcaagagtcaaatattcatgcaggtcctctttctctactttttctatatattaccataaagaggggttttgtttgaaa |
44750428 |
T |
|
| Q |
92 |
aacctaaaaggtttacaaaagcagatcaagaacaagaagaaataacatctagtttttctcaatttccatatatggagtgcagttctgggagatctggtga |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44750429 |
aacctaaaaggtttacaaaagcagatcaagaacaagaagaaataacatctagtttttctcaatttccatatatggagtgcagttctgggagatctggtga |
44750528 |
T |
|
| Q |
192 |
tggagatagtggactcaaagatgataagagaagt |
225 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
44750529 |
tggagatagtggactcaaagatgataagagaagt |
44750562 |
T |
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