View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2807_high_26 (Length: 237)
Name: NF2807_high_26
Description: NF2807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2807_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30619043 - 30618816
Alignment:
| Q |
1 |
aaagaccaataataaattttgtgtatgtttatgaaattttcttgaaataaaattaatgacccatgaaatcataaatgtccacttaacaactcagtcaata |
100 |
Q |
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| T |
30619043 |
aaagaccaataataaattttgtgtatgtttatgaaattttcttgaaataaaattaatgacccatgaaatcataaatgtccacttaacagctctgtcaata |
30618944 |
T |
|
| Q |
101 |
gaaaaatatgaattgctattgaaataacttcggattgaagg------nnnnnnnnnnnaaataaataaaaacaaattaaattcgattacaattttggtag |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| |
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| T |
30618943 |
gaaaaatatgaattgctattgaaataacttcggattgaaggttttttttaaaaaaaataaataaatacaaataaattaaattcgattacaattttggtag |
30618844 |
T |
|
| Q |
195 |
ctaaataaatatgattttttatatacat |
222 |
Q |
| |
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|||||||||||||||||||||||||||| |
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| T |
30618843 |
ctaaataaatatgattttttatatacat |
30618816 |
T |
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