View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2807_high_27 (Length: 233)

Name: NF2807_high_27
Description: NF2807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2807_high_27
NF2807_high_27
[»] chr4 (36 HSPs)
chr4 (8-225)||(32966528-32966746)
chr4 (7-75)||(4390776-4390844)
chr4 (9-69)||(50503253-50503313)
chr4 (7-69)||(30561432-30561494)
chr4 (16-80)||(45780100-45780164)
chr4 (19-74)||(20148066-20148121)
chr4 (143-194)||(32955426-32955477)
chr4 (28-78)||(21370566-21370616)
chr4 (16-74)||(45906887-45906945)
chr4 (16-74)||(53407908-53407966)
chr4 (28-77)||(4516511-4516560)
chr4 (16-77)||(5460076-5460137)
chr4 (28-77)||(11151263-11151312)
chr4 (16-69)||(12233315-12233368)
chr4 (15-75)||(22431541-22431601)
chr4 (25-69)||(33116827-33116871)
chr4 (41-77)||(40120667-40120703)
chr4 (28-75)||(4392067-4392114)
chr4 (28-75)||(7707138-7707185)
chr4 (28-75)||(8942640-8942687)
chr4 (28-75)||(22037694-22037741)
chr4 (28-75)||(27184969-27185016)
chr4 (28-75)||(43225062-43225109)
chr4 (28-75)||(56373209-56373256)
chr4 (28-74)||(27397100-27397146)
chr4 (28-74)||(29414263-29414309)
chr4 (12-74)||(33510116-33510178)
chr4 (28-78)||(37114633-37114683)
chr4 (21-75)||(40496773-40496827)
chr4 (29-78)||(4354957-4355006)
chr4 (28-77)||(8829135-8829184)
chr4 (29-74)||(11601438-11601483)
chr4 (9-74)||(37971047-37971112)
chr4 (31-80)||(42123864-42123913)
chr4 (28-77)||(56269411-56269460)
chr4 (16-76)||(31679604-31679664)
[»] chr1 (28 HSPs)
chr1 (9-77)||(7780486-7780554)
chr1 (16-75)||(13120940-13120999)
chr1 (9-63)||(41004345-41004399)
chr1 (28-77)||(36300422-36300471)
chr1 (16-81)||(41150561-41150626)
chr1 (7-67)||(33152689-33152749)
chr1 (8-76)||(42613431-42613499)
chr1 (28-76)||(44910595-44910643)
chr1 (28-83)||(1918821-1918876)
chr1 (28-75)||(29379775-29379822)
chr1 (28-75)||(29586931-29586978)
chr1 (28-75)||(39827337-39827384)
chr1 (28-75)||(42063611-42063658)
chr1 (28-74)||(15314018-15314064)
chr1 (29-75)||(19898241-19898287)
chr1 (28-74)||(26205072-26205118)
chr1 (29-75)||(29703526-29703572)
chr1 (28-74)||(30780064-30780110)
chr1 (28-78)||(32367706-32367756)
chr1 (28-74)||(33561201-33561247)
chr1 (9-75)||(40720233-40720299)
chr1 (29-74)||(7710311-7710356)
chr1 (28-76)||(27642569-27642617)
chr1 (15-75)||(34319295-34319355)
chr1 (32-76)||(36838021-36838065)
chr1 (7-71)||(37671483-37671547)
chr1 (7-71)||(37704602-37704666)
chr1 (41-77)||(49219786-49219822)
[»] chr6 (17 HSPs)
chr6 (9-74)||(21897489-21897554)
chr6 (7-78)||(28077210-28077281)
chr6 (28-78)||(34684368-34684418)
chr6 (9-74)||(5300925-5300990)
chr6 (28-77)||(28721112-28721161)
chr6 (28-76)||(1805719-1805767)
chr6 (28-75)||(559081-559128)
chr6 (28-75)||(2443194-2443241)
chr6 (28-75)||(27719941-27719988)
chr6 (28-74)||(6709047-6709093)
chr6 (28-78)||(7316926-7316976)
chr6 (28-74)||(12140154-12140200)
chr6 (16-74)||(32732541-32732599)
chr6 (28-74)||(34232222-34232268)
chr6 (28-69)||(31451307-31451348)
chr6 (29-74)||(34904682-34904727)
chr6 (41-77)||(10856875-10856911)
[»] chr2 (25 HSPs)
chr2 (15-75)||(5519358-5519418)
chr2 (16-75)||(38843583-38843642)
chr2 (6-74)||(7399618-7399686)
chr2 (7-78)||(4056682-4056753)
chr2 (16-75)||(8705836-8705895)
chr2 (28-75)||(24401447-24401494)
chr2 (16-75)||(37000220-37000279)
chr2 (28-75)||(39168511-39168558)
chr2 (28-75)||(43506897-43506944)
chr2 (16-65)||(650148-650197)
chr2 (15-76)||(2046465-2046526)
chr2 (16-77)||(9887720-9887781)
chr2 (16-77)||(43136388-43136449)
chr2 (28-76)||(28381977-28382025)
chr2 (28-76)||(31615709-31615757)
chr2 (28-75)||(2545751-2545798)
chr2 (15-74)||(24020632-24020691)
chr2 (28-74)||(4452855-4452901)
chr2 (31-77)||(5040536-5040582)
chr2 (28-74)||(13527267-13527313)
chr2 (28-74)||(36711838-36711884)
chr2 (28-69)||(18710917-18710958)
chr2 (8-69)||(26912368-26912429)
chr2 (9-78)||(41796067-41796136)
chr2 (21-77)||(13762536-13762592)
[»] chr5 (31 HSPs)
chr5 (16-75)||(5997247-5997306)
chr5 (7-76)||(22976390-22976459)
chr5 (21-66)||(33695364-33695409)
chr5 (28-75)||(2179492-2179539)
chr5 (7-74)||(5381186-5381253)
chr5 (16-79)||(12362952-12363015)
chr5 (16-75)||(13227902-13227961)
chr5 (16-75)||(36686577-36686636)
chr5 (29-75)||(35640687-35640733)
chr5 (29-74)||(6603264-6603309)
chr5 (7-75)||(11061819-11061887)
chr5 (9-69)||(36027269-36027329)
chr5 (28-75)||(2672172-2672219)
chr5 (28-75)||(8023285-8023332)
chr5 (22-77)||(8285570-8285625)
chr5 (16-75)||(32383589-32383648)
chr5 (28-75)||(39276169-39276216)
chr5 (41-79)||(1710550-1710588)
chr5 (15-69)||(2498428-2498482)
chr5 (28-74)||(12714052-12714098)
chr5 (28-74)||(12775280-12775326)
chr5 (28-74)||(13156239-13156285)
chr5 (25-75)||(15531199-15531249)
chr5 (29-75)||(25871661-25871707)
chr5 (28-74)||(43403233-43403279)
chr5 (28-77)||(1175564-1175613)
chr5 (16-69)||(9586489-9586542)
chr5 (28-69)||(15444199-15444240)
chr5 (28-77)||(35235078-35235127)
chr5 (28-77)||(35235892-35235941)
chr5 (28-76)||(16856319-16856367)
[»] chr7 (16 HSPs)
chr7 (28-78)||(33203001-33203051)
chr7 (28-79)||(47470378-47470429)
chr7 (10-69)||(47585144-47585203)
chr7 (28-78)||(42375152-42375202)
chr7 (7-76)||(790607-790676)
chr7 (28-77)||(36245741-36245790)
chr7 (28-77)||(42586746-42586795)
chr7 (6-71)||(45673105-45673170)
chr7 (22-74)||(48730277-48730329)
chr7 (40-71)||(34351304-34351335)
chr7 (28-75)||(45686223-45686270)
chr7 (28-74)||(43254932-43254978)
chr7 (28-74)||(48831421-48831467)
chr7 (28-69)||(34709979-34710020)
chr7 (28-69)||(46878632-46878673)
chr7 (19-63)||(11465387-11465431)
[»] chr3 (30 HSPs)
chr3 (7-69)||(45369645-45369707)
chr3 (16-69)||(48943331-48943384)
chr3 (16-76)||(38186519-38186579)
chr3 (16-75)||(29080618-29080677)
chr3 (28-74)||(25571149-25571195)
chr3 (28-78)||(40562673-40562723)
chr3 (7-77)||(41519293-41519363)
chr3 (16-69)||(21707847-21707900)
chr3 (28-77)||(29717563-29717612)
chr3 (16-69)||(35500389-35500442)
chr3 (28-77)||(55227123-55227172)
chr3 (28-76)||(2579339-2579387)
chr3 (9-69)||(24627462-24627522)
chr3 (19-75)||(44946523-44946579)
chr3 (9-69)||(52226112-52226172)
chr3 (28-75)||(37528084-37528131)
chr3 (28-75)||(43526493-43526540)
chr3 (9-76)||(46972783-46972850)
chr3 (9-75)||(2852646-2852712)
chr3 (28-70)||(4241052-4241094)
chr3 (7-69)||(32025583-32025645)
chr3 (29-83)||(40479397-40479451)
chr3 (28-70)||(44846364-44846406)
chr3 (36-69)||(1265226-1265259)
chr3 (28-77)||(19947655-19947704)
chr3 (28-77)||(37089029-37089078)
chr3 (29-77)||(45344378-45344426)
chr3 (28-80)||(52165408-52165460)
chr3 (21-69)||(52867516-52867564)
chr3 (41-81)||(54541381-54541421)
[»] chr8 (17 HSPs)
chr8 (28-77)||(10619612-10619661)
chr8 (16-75)||(17116274-17116333)
chr8 (16-75)||(31687410-31687469)
chr8 (28-78)||(31582494-31582544)
chr8 (9-75)||(44158002-44158068)
chr8 (28-77)||(25024126-25024175)
chr8 (28-74)||(32541962-32542008)
chr8 (16-74)||(37586563-37586621)
chr8 (26-71)||(1363143-1363188)
chr8 (26-71)||(18411444-18411489)
chr8 (28-69)||(28710064-28710105)
chr8 (28-69)||(28717411-28717452)
chr8 (28-69)||(30338304-30338345)
chr8 (28-69)||(39872026-39872067)
chr8 (7-75)||(8435811-8435879)
chr8 (9-45)||(36591001-36591037)
chr8 (15-75)||(44318979-44319039)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-74)||(129503-129561)
[»] scaffold0197 (1 HSPs)
scaffold0197 (28-77)||(28361-28410)
[»] scaffold0349 (1 HSPs)
scaffold0349 (28-75)||(9363-9410)
[»] scaffold0116 (1 HSPs)
scaffold0116 (28-75)||(25664-25711)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-75)||(92842-92901)
[»] scaffold0418 (1 HSPs)
scaffold0418 (21-75)||(5208-5262)
[»] scaffold0246 (1 HSPs)
scaffold0246 (28-74)||(7797-7843)
[»] scaffold0173 (1 HSPs)
scaffold0173 (28-74)||(22220-22266)
[»] scaffold0122 (1 HSPs)
scaffold0122 (28-74)||(11783-11829)
[»] scaffold0027 (1 HSPs)
scaffold0027 (28-74)||(41063-41109)
[»] scaffold0362 (1 HSPs)
scaffold0362 (16-77)||(6157-6218)


Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 32966528 - 32966746
Alignment:
Q  8 catcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc-ttaaacaaacttttttccctttcgcaaaagac 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  32966528 catcagctatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcccttaaacacacttttttccctttcccaaaagac 32966627  T
Q  107 ttatacttggtagatttttaaaaatgttatttgtggtttttctgcagtggtcatgggaaacaatagtcatggggatttccttcttggtaatacttctgct 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32966628 ttatacttggtagatttttaaaaatgttatttgtggtttttctgcagtggtcatgggaaacaatagtcatggggatttccttcttggtaatacttctgct 32966727  T
Q  207 cgcaagacagattgtaaga 225  Q
    |||||||||||||||||||    
T  32966728 cgcaagacagattgtaaga 32966746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 4390844 - 4390776
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||| || | |||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  4390844 tcatcagctataagctataagctatcagctagcttatcaactatccgctatttttaccaaacagagcct 4390776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 50503253 - 50503313
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  50503253 atcagccatcagctataagctatcagctagcttatcagctatccgctatttttaccaaaca 50503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 30561494 - 30561432
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||||||| ||||||||||| |||| |||||| |||||| ||||||| |||||||||||||||    
T  30561494 tcatcagctatcaactataagctataagctagcttatcagctatccgctatttttaccaaaca 30561432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 45780164 - 45780100
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaac 80  Q
    |||| |||||| ||||||||||| ||||||  |||||| ||||||||||||||| ||||||||||    
T  45780164 atcagctataagctatcagctagcttatcagttatccgctatttttaccaaacagagccttaaac 45780100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 20148121 - 20148066
Alignment:
Q  19 aactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||||||| ||| ||||||| ||||||||| ||||||||||||| ||||    
T  20148121 aactataaactatcaactaatttatcagctatccgttgtttttaccaaacagagcc 20148066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 32955426 - 32955477
Alignment:
Q  143 tttttctgcagtggtcatgggaaacaatagtcatggggatttccttcttggt 194  Q
    |||||||||||||||||||| |||||||||| ||||| |||| |||||||||    
T  32955426 tttttctgcagtggtcatggcaaacaatagtgatgggaatttgcttcttggt 32955477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 21370566 - 21370616
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  21370566 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 21370616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 45906887 - 45906945
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  45906887 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 45906945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 53407908 - 53407966
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  53407908 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 53407966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 4516560 - 4516511
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  4516560 ctatcagctagcttatcagttatccgttatttttaccaaacagagcctta 4516511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 5460137 - 5460076
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    |||| |||||| ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  5460137 atcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagcctta 5460076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 11151312 - 11151263
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  11151312 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 11151263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 12233368 - 12233315
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||| |||||| ||||||||||| |||||||||||||| ||||||||| |||||    
T  12233368 atcagctataagctatcagctagcttatcaactatccgctatttttactaaaca 12233315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 22431541 - 22431601
Alignment:
Q  15 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||| |||| ||||||||||||| |||| | ||||||| ||||||||||||||| |||||    
T  22431541 catcagctatcaactatcagctagcttataagctatccgctatttttaccaaacagagcct 22431601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 33116827 - 33116871
Alignment:
Q  25 aaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||    
T  33116827 aaactatcagctagcttatcagctatccgctatttttaccaaaca 33116871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 40120667 - 40120703
Alignment:
Q  41 tatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40120667 tatcaactatccgttatttttaccaaacagagcctta 40120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 4392114 - 4392067
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  4392114 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 4392067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 7707138 - 7707185
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  7707138 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 7707185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 8942640 - 8942687
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  8942640 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 8942687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 22037741 - 22037694
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  22037741 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 22037694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 27185016 - 27184969
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  27185016 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 27184969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 43225109 - 43225062
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  43225109 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 43225062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 56373209 - 56373256
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  56373209 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 56373256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 27397146 - 27397100
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  27397146 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 27397100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 29414263 - 29414309
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  29414263 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 29414309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 33510116 - 33510178
Alignment:
Q  12 agccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||||||| |||||| ||||||||||| ||||||   ||||||||||||||| ||||| ||||    
T  33510116 agccatcagctataagctatcagctagcttatcagtcatccgttatttttacaaaacagagcc 33510178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 37114683 - 37114633
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||| |||||| ||||| | ||||||||||||||| ||||||||    
T  37114683 ctatcagctagcttatcagctatctgctatttttaccaaacagagccttaa 37114633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 40496827 - 40496773
Alignment:
Q  21 ctataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||| ||||||||||| |||||| ||| ||| ||||||||||||||| |||||    
T  40496827 ctataagctatcagctagcttatcagctaaccgctatttttaccaaacagagcct 40496773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 4355006 - 4354957
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    |||||||||| |||||| ||||||||||||||||| ||||| ||| ||||    
T  4355006 tatcagctagcttatcagctatccgttatttttacgaaacagagctttaa 4354957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 8829184 - 8829135
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  8829184 ctatcagctagcttattagctatccgctatttttaccaaacagagcctta 8829135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 11601438 - 11601483
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  11601438 tatcagctagcttatcagctatccgctatttttaccaaacagagcc 11601483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 37971047 - 37971112
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||||| |||| ||| || |||||| |||  |||||| ||||||| ||||||||||||||||||||    
T  37971047 atcagctatcagctaaaagctatcaactaacttatcagctatccgctatttttaccaaacaaagcc 37971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 42123913 - 42123864
Alignment:
Q  31 tcagctagtttatcaactatccgttatttttaccaaacaaagccttaaac 80  Q
    |||| ||| |||||| ||||||| ||||||||||||||||||||| ||||    
T  42123913 tcagttagcttatcagctatccgctatttttaccaaacaaagcctaaaac 42123864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 56269460 - 56269411
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  56269460 ctatcagctagcttataagctatccgctatttttaccaaacagagcctta 56269411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 31679604 - 31679664
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||| ||| ||||||| |||||  |||||| ||||||| ||||||||||||||| ||||||    
T  31679604 atcagctaaaaactattagctaacttatcagctatccgctatttttaccaaacagagcctt 31679664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 7780554 - 7780486
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  7780554 atcagccatcagctataagctatcagctagcttataaactatccgttatttttaccaaacagagcctta 7780486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 13120999 - 13120940
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  13120999 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcct 13120940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 41004399 - 41004345
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttac 63  Q
    ||||| ||||| ||||||| |||||||||  ||||||||||||||||||||||||    
T  41004399 atcagtcatcagctataaaatatcagctatcttatcaactatccgttatttttac 41004345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 36300471 - 36300422
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  36300471 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 36300422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 41150626 - 41150561
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaaca 81  Q
    |||| ||| |||||||||||||  |||||| ||||||| ||||||||||||||| ||||| |||||    
T  41150626 atcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcctaaaaca 41150561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 33152689 - 33152749
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaa 67  Q
    |||||| | |||| |||||||||||||||||| |||||| ||||||| |||||||| ||||    
T  33152689 tcatcaactatcagctataaactatcagctagcttatcagctatccgctatttttatcaaa 33152749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 42613499 - 42613431
Alignment:
Q  8 catcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||||||||||| |||||| ||||||||||| ||||||   ||||| |||||||||| |||| ||||||    
T  42613499 catcagccatcagctataagctatcagctagcttatcagtcatccgctatttttaccgaacatagcctt 42613431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 44910595 - 44910643
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  44910595 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 44910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 1918821 - 1918876
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaacaaa 83  Q
    |||||| |||| |||||| ||||||| ||||||||||||||| |||||||| ||||    
T  1918821 ctatcaactagcttatcagctatccgctatttttaccaaacagagccttaatcaaa 1918876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 29379775 - 29379822
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29379775 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 29379822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 29586931 - 29586978
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29586931 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 29586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 39827337 - 39827384
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  39827337 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 39827384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 42063658 - 42063611
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  42063658 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 42063611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15314018 - 15314064
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  15314018 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 15314064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 19898287 - 19898241
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  19898287 tatcagctagcttatcagctatccgctatttttaccaaacagagcct 19898241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 26205072 - 26205118
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  26205072 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 26205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 29703572 - 29703526
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29703572 tatcagctagcttatcagctatccgctatttttaccaaacagagcct 29703526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 30780064 - 30780110
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  30780064 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 30780110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 32367756 - 32367706
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| ||||||||    
T  32367756 ctatcagctaacttatcagctatccgctatttttaccaaacagagccttaa 32367706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 33561247 - 33561201
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  33561247 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 33561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 40720233 - 40720299
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| |||||| |||||| ||||||||||| ||||||   ||||||||||| ||||||||| |||||    
T  40720233 atcaaccatcagctataagctatcagctagcttatcagtcatccgttatttctaccaaacagagcct 40720299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 7710356 - 7710311
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  7710356 tatcagctagcttatcagctatccgctatttttaccaaacagagcc 7710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 27642617 - 27642569
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||||| |||| ||||||| ||||| |||||||||||||||| ||||||    
T  27642617 ctatcaactagcttatcaattatccattatttttaccaaacatagcctt 27642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 34319295 - 34319355
Alignment:
Q  15 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||| |||||| ||||||||||  |||| | ||||||| ||||||||||||||| |||||    
T  34319295 catcagctataagctatcagctaacttataagctatccgctatttttaccaaacagagcct 34319355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 36838065 - 36838021
Alignment:
Q  32 cagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    ||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  36838065 cagctagcttatcagctatccgctatttttaccaaacagagcctt 36838021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 37671547 - 37671483
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaa 71  Q
    |||||||| || | |||||| ||||||||||| ||||||   ||||| |||||||||||||||||    
T  37671547 tcatcagctataagctataagctatcagctagcttatcagtcatccgctatttttaccaaacaaa 37671483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 37704602 - 37704666
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaa 71  Q
    |||||||| || | |||||| ||||||||||| ||||||   ||||| |||||||||||||||||    
T  37704602 tcatcagctataagctataagctatcagctagcttatcagtcatccgctatttttaccaaacaaa 37704666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 49219822 - 49219786
Alignment:
Q  41 tatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  49219822 tatcaactatccgctatttttaccaaacagagcctta 49219786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 21897489 - 21897554
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||||| || |||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||    
T  21897489 atcagctataaactataagctatcaactagcttataaactatccgttatttttaccaaacaaagcc 21897554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 28077210 - 28077281
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    |||| ||| |||| |||||| ||||||| ||| |||| ||||||||| ||||||||||||||| ||||||||    
T  28077210 tcataagctatcagctataagctatcaggtagcttataaactatccgctatttttaccaaacagagccttaa 28077281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 34684418 - 34684368
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  34684418 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 34684368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 5300990 - 5300925
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||| ||||| |||||| |||| |||||| |||| ||||||||| ||||||||||||||| ||||    
T  5300990 atcagtcatcagctataagctataagctagcttataaactatccgctatttttaccaaacagagcc 5300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 28721161 - 28721112
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  28721161 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 28721112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 1805767 - 1805719
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  1805767 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 1805719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 559081 - 559128
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  559081 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 559128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 2443194 - 2443241
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  2443194 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 2443241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 27719988 - 27719941
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  27719988 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 6709093 - 6709047
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  6709093 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 6709047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 7316976 - 7316926
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| ||||||||    
T  7316976 ctatcagctagcttataagctatccgctatttttaccaaacagagccttaa 7316926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 12140200 - 12140154
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||||||||||  |||||| ||||||||||||||| ||||    
T  12140200 ctatcagctagtttatcagttatccgctatttttaccaaacagagcc 12140154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 32732541 - 32732599
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||| |||||| |||||| |||| |||||| ||||||| ||||||||||||||| ||||    
T  32732541 atcagctataagctatcatctagcttatcagctatccgctatttttaccaaacagagcc 32732599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 34232268 - 34232222
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  34232268 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 34232222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 31451348 - 31451307
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  31451348 ctatcagctagcttatcagctatccgctatttttaccaaaca 31451307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 34904682 - 34904727
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||||||||  |||||| ||||||||||||||||||||||| ||||    
T  34904682 tatcagctaacttatcagctatccgttatttttaccaaacagagcc 34904727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 10856875 - 10856911
Alignment:
Q  41 tatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  10856875 tatcagctatccgctatttttaccaaacaaagcctta 10856911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 5519418 - 5519358
Alignment:
Q  15 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||||| | |||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  5519418 catcaactatcagctataagctagtttatcagctatccgttatttttaccaaacagagcct 5519358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 38843583 - 38843642
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| |||||||||||||||||| |||||| ||||||| | |||||||||||||||||||    
T  38843583 atcagctataaactatcagctagcttatcagctatccgctgtttttaccaaacaaagcct 38843642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 7399686 - 7399618
Alignment:
Q  6 atcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||| |||| |||||| |||| |||||| |||||| ||||||| ||||||||||||||| ||||    
T  7399686 atcatcagctatcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcc 7399618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 4056682 - 4056753
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||| ||||| |||||| ||||||||||| |||| | ||||||| ||||||||||||||| ||| ||||    
T  4056682 tcatcagtcatcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagctttaa 4056753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 8705895 - 8705836
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  8705895 atcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 8705836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 24401494 - 24401447
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  24401494 ctatcagctagtttatcagctatccgctatttttaccaaacagagcct 24401447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 37000220 - 37000279
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| ||| ||||||||| |||| |||||||||||||| ||||||||||||||| |||||    
T  37000220 atcagctaaaaactatcaactagcttatcaactatccgctatttttaccaaacagagcct 37000279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 39168511 - 39168558
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||| |||| |||||||||||||||||||||||||||||| |||||    
T  39168511 ctatcaactagcttatcaactatccgttatttttaccaaacagagcct 39168558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 43506944 - 43506897
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  43506944 ctatcagctagcttatcagctatccgttatttttaccaaacagagcct 43506897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 650197 - 650148
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttacca 65  Q
    |||| ||| |||||||||||||| |||||||||||||| |||||||||||    
T  650197 atcagctaaaaactatcagctagcttatcaactatccgctatttttacca 650148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 2046526 - 2046465
Alignment:
Q  15 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    ||||| ||||||||||| |||||| |||||||  ||||| ||||||||||||||| ||||||    
T  2046526 catcagctataaactataagctagcttatcaatcatccgctatttttaccaaacagagcctt 2046465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 9887720 - 9887781
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    |||| |||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  9887720 atcagctataagctatcagctaacttatcagctatccgctatttttaccaaacagagcctta 9887781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 43136388 - 43136449
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    |||| |||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  43136388 atcagctataagctatcagctaccttatcagctatccgctatttttaccaaacagagcctta 43136449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 28382025 - 28381977
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  28382025 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 28381977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 31615757 - 31615709
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||||||||||||||||| ||||||  ||||||||||||||| ||||||    
T  31615757 ctatcagctagtttatcagctatccactatttttaccaaacagagcctt 31615709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 2545798 - 2545751
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  2545798 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 2545751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 24020632 - 24020691
Alignment:
Q  15 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||| |||||||||||||||||| |||| | ||||||  ||||||||||||||| ||||    
T  24020632 catcagctataaactatcagctagcttataagctatccactatttttaccaaacagagcc 24020691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 4452901 - 4452855
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  4452901 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 4452855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 5040536 - 5040582
Alignment:
Q  31 tcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    |||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  5040536 tcagctagcttatcagctatccgctatttttaccaaacagagcctta 5040582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 13527313 - 13527267
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  13527313 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 13527267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 36711884 - 36711838
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  36711884 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 36711838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 18710917 - 18710958
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  18710917 ctatcagctagcttatcagctatccgctatttttaccaaaca 18710958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 26912368 - 26912429
Alignment:
Q  8 catcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||| || | ||||||||| |||||||| ||||||  |||||| |||||||||||||||    
T  26912368 catcagcaataagctataaactttcagctagcttatcagttatccgctatttttaccaaaca 26912429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 41796136 - 41796067
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    |||||| |||| ||| || ||||||||||  |||||| ||||| | ||||||||||||||| ||||||||    
T  41796136 atcagctatcagctaaaagctatcagctaacttatcagctatctgctatttttaccaaacagagccttaa 41796067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 13762536 - 13762592
Alignment:
Q  21 ctataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    |||||||||||||| ||| |||| | ||||||| |||||||| |||||| |||||||    
T  13762536 ctataaactatcagttagcttataagctatccgctatttttatcaaacagagcctta 13762592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 5997306 - 5997247
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| |||||||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  5997306 atcagctataaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 5997247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 22976459 - 22976390
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||||||| |||| ||||||||||| |||||| |||||| ||||||| |||||||||||| || ||||||    
T  22976459 tcatcagctatcagctataaactataagctagcttatcagctatccgctatttttaccaagcagagcctt 22976390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 33695364 - 33695409
Alignment:
Q  21 ctataaactatcagctagtttatcaactatccgttatttttaccaa 66  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  33695364 ctataaactatcagctagcttatcaactatccgctatttttaccaa 33695409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 2179492 - 2179539
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  2179492 ctatcagctagcttatcaactatccgctatttttaccaaacagagcct 2179539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 5381253 - 5381186
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||||||| |||| |||||| |||| |||||| |||||| ||||||| ||||||||||||||| ||||    
T  5381253 tcatcagctatcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcc 5381186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 12363015 - 12362952
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaa 79  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| || ||||||    
T  12363015 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagtcttaaa 12362952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 13227961 - 13227902
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  13227961 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcct 13227902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 36686577 - 36686636
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  36686577 atcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 36686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 35640687 - 35640733
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||    
T  35640687 tatcagctagcttatcaactatccgctatttttaccaaacagagcct 35640733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 6603309 - 6603264
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  6603309 tatcagctagtttatcagctatccgctatttttaccaaacagagcc 6603264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 11061887 - 11061819
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||| || | |||||| |||| |||||| |||||| ||||||| ||||||||||||||| |||||    
T  11061887 tcatcagctataagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcct 11061819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 36027329 - 36027269
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||||||||||  ||||| |||||| ||||||||||||  ||||| |||||||||||||||    
T  36027329 atcagccatcagttataatctatcaactagtttatcaatcatccgctatttttaccaaaca 36027269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 2672172 - 2672219
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  2672172 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 2672219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 8023332 - 8023285
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  8023332 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 8023285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 8285570 - 8285625
Alignment:
Q  22 tataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||| |||| |||||| |||||| ||||||| ||||||||||||||| |||||||    
T  8285570 tataagctataagctagcttatcagctatccgctatttttaccaaacagagcctta 8285625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 32383589 - 32383648
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| ||| |||||||||||||  |||||| ||||||| ||||||||||||||| |||||    
T  32383589 atcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcct 32383648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 39276169 - 39276216
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  39276169 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 39276216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 1710588 - 1710550
Alignment:
Q  41 tatcaactatccgttatttttaccaaacaaagccttaaa 79  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  1710588 tatcaactatccgctatttttaccaaacagagccttaaa 1710550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 2498428 - 2498482
Alignment:
Q  15 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||| |||||||||||||||||  |||||| |||| ||||||||||| ||||||    
T  2498428 catcagctataaactatcagctaacttatcagctatacgttatttttatcaaaca 2498482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 12714052 - 12714098
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  12714052 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 12714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 12775280 - 12775326
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  12775280 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 12775326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 13156285 - 13156239
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  13156285 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 13156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 15531199 - 15531249
Alignment:
Q  25 aaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||||||||  |||||| ||||||| ||||||||||||||| |||||    
T  15531199 aaactatcagctaacttatcagctatccgctatttttaccaaacagagcct 15531249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 25871707 - 25871661
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||||||||| ||||||| |||||||| |||||| |||||    
T  25871707 tatcagctagtttatcagctatccgctatttttatcaaacagagcct 25871661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 43403233 - 43403279
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  43403233 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 43403279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1175564 - 1175613
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| |||||||    
T  1175564 ctatcagctagcttataagctatccgctatttttaccaaacagagcctta 1175613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 9586542 - 9586489
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||| ||| |||||||||||||  |||||| ||||||| |||||||||||||||    
T  9586542 atcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaaca 9586489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 15444199 - 15444240
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  15444199 ctatcagctagcttatcagctatccgctatttttaccaaaca 15444240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 35235127 - 35235078
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  35235127 ctatcagctaacttatcagctatccgctatttttaccaaacagagcctta 35235078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 35235941 - 35235892
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  35235941 ctatcagctaacttatcagctatccgctatttttaccaaacagagcctta 35235892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 16856367 - 16856319
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||||| |||| |||||| ||||||| ||||||||||||||| ||||||    
T  16856367 ctatcaactagcttatcagctatccgctatttttaccaaacagagcctt 16856319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 33203051 - 33203001
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    |||||||||||||||||| ||||||| ||||||||||||||| ||||||||    
T  33203051 ctatcagctagtttatcagctatccgctatttttaccaaacagagccttaa 33203001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 47470429 - 47470378
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaa 79  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||||    
T  47470429 ctatcagctagcttatcagctatccgctatttttaccaaacatagccttaaa 47470378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 47585144 - 47585203
Alignment:
Q  10 tcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||| ||||| |||||| ||||||||||| |||||| ||||||||| |||||||||||||    
T  47585144 tcagtcatcagctataagctatcagctagcttatcagctatccgttgtttttaccaaaca 47585203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 42375202 - 42375152
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  42375202 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 42375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 790676 - 790607
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    ||||||||  ||| |||||| |||| |||||| |||||| ||||||| ||||||||||||||| ||||||    
T  790676 tcatcagctgtcagctataagctataagctagcttatcagctatccgctatttttaccaaacagagcctt 790607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 36245790 - 36245741
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  36245790 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 36245741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 42586795 - 42586746
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  42586795 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 42586746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 45673105 - 45673170
Alignment:
Q  6 atcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaa 71  Q
    ||||||||  ||||| ||||| ||||||||||| ||||||  |||||| |||||||||||||||||    
T  45673105 atcatcagttatcaattataagctatcagctagcttatcagatatccgctatttttaccaaacaaa 45673170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 48730277 - 48730329
Alignment:
Q  22 tataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||| ||||||||||| |||||||||||||| ||||||| ||||||| ||||    
T  48730277 tataagctatcagctagcttatcaactatccgctatttttcccaaacagagcc 48730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 71
Target Start/End: Complemental strand, 34351335 - 34351304
Alignment:
Q  40 ttatcaactatccgttatttttaccaaacaaa 71  Q
    ||||||||||||||||||||||||||||||||    
T  34351335 ttatcaactatccgttatttttaccaaacaaa 34351304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 45686270 - 45686223
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  45686270 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 45686223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 43254932 - 43254978
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  43254932 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 43254978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 48831467 - 48831421
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  48831467 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 48831421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 34709979 - 34710020
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  34709979 ctatcagctagcttatcagctatccgctatttttaccaaaca 34710020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 46878673 - 46878632
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  46878673 ctatcagctagcttatcagctatccgctatttttaccaaaca 46878632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 11465431 - 11465387
Alignment:
Q  19 aactataaactatcagctagtttatcaactatccgttatttttac 63  Q
    |||||| ||||||||||||| |||| ||||||||| |||||||||    
T  11465431 aactatcaactatcagctagcttataaactatccgctatttttac 11465387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 45369645 - 45369707
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||||||| ||||||||||| ||||||||||  |||||| ||||||| |||||||||||||||    
T  45369645 tcatcagctatcaactataagctatcagctaacttatcagctatccgctatttttaccaaaca 45369707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 48943331 - 48943384
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||| ||| ||||||||||||||||||||| ||||||| |||||||||||||||    
T  48943331 atcagctaaaaactatcagctagtttatcagctatccgctatttttaccaaaca 48943384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 38186519 - 38186579
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  38186519 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 38186579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 29080677 - 29080618
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  29080677 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcct 29080618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 25571149 - 25571195
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||    
T  25571149 ctatcagctagcttatcagctatccgttatttttaccaaacatagcc 25571195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 40562723 - 40562673
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  40562723 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 40562673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 41519293 - 41519363
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||| || |||| |||||| |||| |||||| |||||| ||||||||| ||||||||||||| |||||||    
T  41519293 tcatccgctatcagctataagctataagctagcttatcagctatccgttttttttaccaaacagagcctta 41519363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 21707847 - 21707900
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  21707847 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaaca 21707900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 29717612 - 29717563
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  29717612 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 29717563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 35500389 - 35500442
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||    
T  35500389 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaaca 35500442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 55227172 - 55227123
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  55227172 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 55227123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 2579387 - 2579339
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  2579387 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctt 2579339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 24627522 - 24627462
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||| ||||| |||| | |||| |||||| |||||||||||||| |||||||||||||||    
T  24627522 atcagtcatcatctatcagctataagctagcttatcaactatccgctatttttaccaaaca 24627462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 44946579 - 44946523
Alignment:
Q  19 aactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||| ||||||||||  |||| | ||||||||||||||||||||||| |||||    
T  44946579 aactataagctatcagctaacttataagctatccgttatttttaccaaacagagcct 44946523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 52226112 - 52226172
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||| |||||| |||||||||||||||||| ||||||   ||||| |||||||||||||||    
T  52226112 atcaaccatcagctataaactatcagctagcttatcagtcatccgctatttttaccaaaca 52226172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 37528131 - 37528084
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  37528131 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 37528084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 43526493 - 43526540
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||  |||||||||||||| ||||||||||||||| |||||    
T  43526493 ctatcagctaacttatcaactatccgctatttttaccaaacagagcct 43526540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 46972783 - 46972850
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctt 76  Q
    |||||| |||| ||| || ||||||||||| |||| | ||||||| ||||||||||||||| ||||||    
T  46972783 atcagctatcagctaaaagctatcagctagcttataagctatccgctatttttaccaaacagagcctt 46972850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 2852646 - 2852712
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||| ||||| |||||| |||| || ||| |||||| ||||||| ||||||||||||||| |||||    
T  2852646 atcagtcatcagctataagctataagttagcttatcagctatccgctatttttaccaaacagagcct 2852712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 4241052 - 4241094
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaa 70  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||    
T  4241052 ctatcagctagcttatcagctatccgttatttttactaaacaa 4241094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 32025645 - 32025583
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||||||| || | |||||| ||||||||||| |||| | ||||||| |||||||||||||||    
T  32025645 tcatcagctataagctataagctatcagctagcttataagctatccgctatttttaccaaaca 32025583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 40479451 - 40479397
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaacaaa 83  Q
    |||||| ||| |||||| ||||||| ||||||||||||||| ||||| |||||||    
T  40479451 tatcagttagcttatcagctatccgctatttttaccaaacagagcctaaaacaaa 40479397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 44846364 - 44846406
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaa 70  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||    
T  44846364 ctatcagctagcttatcagctatccgctatttttaccaaacaa 44846406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 1265259 - 1265226
Alignment:
Q  36 tagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||||||| ||||||||||||||||||    
T  1265259 tagtttatcaactattcgttatttttaccaaaca 1265226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 19947704 - 19947655
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| ||||||  |||||| ||||||||||||||| |||||||    
T  19947704 ctatcagctagcttatcagttatccgctatttttaccaaacagagcctta 19947655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 37089029 - 37089078
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||| ||| |||||| ||||||| ||||||||||||||| |||||||    
T  37089029 ctatcagttagcttatcagctatccgctatttttaccaaacagagcctta 37089078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 45344426 - 45344378
Alignment:
Q  29 tatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    |||||||||  |||||| ||||||| ||||||||||||||| |||||||    
T  45344426 tatcagctaacttatcagctatccgctatttttaccaaacagagcctta 45344378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 52165460 - 52165408
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaaac 80  Q
    ||||||| ||| |||| | ||||||| ||||||||||||||| ||||||||||    
T  52165460 ctatcagttagcttataagctatccgctatttttaccaaacagagccttaaac 52165408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 52867564 - 52867516
Alignment:
Q  21 ctataaactatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    |||||| ||||||||||| |||| | ||||||| |||||||||||||||    
T  52867564 ctataagctatcagctagcttataagctatccgctatttttaccaaaca 52867516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 54541421 - 54541381
Alignment:
Q  41 tatcaactatccgttatttttaccaaacaaagccttaaaca 81  Q
    ||||| ||||||||||||||||||||||| ||||| |||||    
T  54541421 tatcagctatccgttatttttaccaaacagagcctaaaaca 54541381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 10619612 - 10619661
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  10619612 ctatcagctagcttatcaactatccgctatttttaccaaacagagcctta 10619661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 17116274 - 17116333
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  17116274 atcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 17116333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 31687469 - 31687410
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| ||| |||||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  31687469 atcagctaaaaactatcagctagcttatcagctatccgctatttttaccaaacagagcct 31687410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 31582494 - 31582544
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagccttaa 78  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||||||    
T  31582494 ctatcagctagcttatcagctatccgctatttttaccaaacagagccttaa 31582544  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 44158002 - 44158068
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||| |||| |||||| ||||||||||| |||| | ||||||| ||||||||||||||| |||||    
T  44158002 atcagctatcagctataagctatcagctagcttataagctatccgctatttttaccaaacagagcct 44158068  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 25024126 - 25024175
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  25024126 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 25024175  T

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Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 32541962 - 32542008
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  32541962 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 32542008  T

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Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 37586621 - 37586563
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||| ||| ||||||||| |||| |||||| |||| || ||||||||||||||||||||    
T  37586621 atcagctaaaaactatcaactagcttatcagctattcgctatttttaccaaacaaagcc 37586563  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 1363188 - 1363143
Alignment:
Q  26 aactatcagctagtttatcaactatccgttatttttaccaaacaaa 71  Q
    ||||||||||||  ||||||| |||||| |||||||||||||||||    
T  1363188 aactatcagctaacttatcaattatccgctatttttaccaaacaaa 1363143  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 18411444 - 18411489
Alignment:
Q  26 aactatcagctagtttatcaactatccgttatttttaccaaacaaa 71  Q
    |||||||  ||| ||||||||||||||| |||||||||||||||||    
T  18411444 aactatcgactattttatcaactatccgctatttttaccaaacaaa 18411489  T

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Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 28710064 - 28710105
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||  |||||||||||||| |||||||||||||||    
T  28710064 ctatcagctaacttatcaactatccgctatttttaccaaaca 28710105  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 28717411 - 28717452
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||  |||||||||||||| |||||||||||||||    
T  28717411 ctatcagctaacttatcaactatccgctatttttaccaaaca 28717452  T

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Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 30338304 - 30338345
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||  |||||| |||||||||||||||||||||||    
T  30338304 ctatcagctaacttatcagctatccgttatttttaccaaaca 30338345  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 39872026 - 39872067
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaaca 69  Q
    ||||||||||| |||||| ||||||| |||||||||||||||    
T  39872026 ctatcagctagcttatcagctatccgctatttttaccaaaca 39872067  T

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Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 8435879 - 8435811
Alignment:
Q  7 tcatcagccatcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||||| || | ||||||  ||| |||||| |||||| ||||||| ||||||||||||||| |||||    
T  8435879 tcatcagctataagctataagttataagctagcttatcagctatccgctatttttaccaaacagagcct 8435811  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 45
Target Start/End: Original strand, 36591001 - 36591037
Alignment:
Q  9 atcagccatcaactataaactatcagctagtttatca 45  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  36591001 atcagccatcagctataaactatcagctagcttatca 36591037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 44318979 - 44319039
Alignment:
Q  15 catcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||||| |||||||||  |||| | ||||||| |||||||||||| || |||||    
T  44318979 catcaactataaattatcagctaacttataagctatccgctatttttaccaaccagagcct 44319039  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 129561 - 129503
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||| |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  129561 atcagctataagctatcagctagcttatcagctatccgctatttttaccaaacagagcc 129503  T

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Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 28410 - 28361
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||||    
T  28410 ctatcagctagcttatcagctatccgctatttttaccaaacagagcctta 28361  T

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Target: scaffold0349 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 9410 - 9363
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  9410 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 9363  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 25664 - 25711
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| |||||    
T  25664 ctatcagctagcttatcagctatccgctatttttaccaaacagagcct 25711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 92901 - 92842
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||| ||| |||||||||||||  |||||| ||||||| ||||||||||||||| |||||    
T  92901 atcagctaaaaactatcagctaacttatcagctatccgctatttttaccaaacagagcct 92842  T

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Target: scaffold0418 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 5208 - 5262
Alignment:
Q  21 ctataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcct 75  Q
    |||||| ||||||||||| |||||| ||| ||| ||||||||||||||| |||||    
T  5208 ctataagctatcagctagcttatcagctaaccgctatttttaccaaacagagcct 5262  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 7797 - 7843
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  7797 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 7843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 22266 - 22220
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    |||| |||||| |||||| ||||||||||||||||||||||| ||||    
T  22266 ctataagctagcttatcagctatccgttatttttaccaaacagagcc 22220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 11829 - 11783
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  11829 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 11783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 41109 - 41063
Alignment:
Q  28 ctatcagctagtttatcaactatccgttatttttaccaaacaaagcc 74  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  41109 ctatcagctagcttatcagctatccgctatttttaccaaacagagcc 41063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 6157 - 6218
Alignment:
Q  16 atcaactataaactatcagctagtttatcaactatccgttatttttaccaaacaaagcctta 77  Q
    |||| ||| ||||||||| |||  |||||| ||||||| ||||||||||||||| |||||||    
T  6157 atcagctaaaaactatcaactaacttatcagctatccgctatttttaccaaacagagcctta 6218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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