View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2807_low_15 (Length: 298)
Name: NF2807_low_15
Description: NF2807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2807_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 48606598 - 48606872
Alignment:
| Q |
1 |
gtgggtcaaagataatgagtaacgggaaccatgcttgtgtttgggttgaaattgaaatgaaacggaaagtggcagagagagattattatggaattatctt |
100 |
Q |
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| T |
48606598 |
gtgggtcaaagataatgagtaacgggaaccatgcttgtgtttgggttgaaattgaaatgaaacggaaagtggcagagagagattattatggaattatctt |
48606697 |
T |
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| Q |
101 |
aaagtgagcgcaacgcaaaggggacaatgagctttacctgggtctgagtctgaatgatgcttcaacttcaaccatgatgatcagtgccatcggagatgat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
48606698 |
aaagtgagcgcaacgcaaaggggacaatgagctttacctgggtctgagtctgagtgatgcttcaacttcaaccatgatgatcagtgtcatcggagatgat |
48606797 |
T |
|
| Q |
201 |
gatgcttattctctctgaaacagggggaaccaatttcaaatattgaatcaatgtcattgtcatgtcatggaccct |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48606798 |
gatgcttattctctctgaaacagggggaaccaatttcaaatattgaatcaatgtcattgtcatgtcatggaccct |
48606872 |
T |
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