View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2808_low_11 (Length: 301)
Name: NF2808_low_11
Description: NF2808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2808_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 14 - 295
Target Start/End: Original strand, 46752914 - 46753195
Alignment:
| Q |
14 |
gaaaaaggtccaaaagatttactaggactaatgatagaagctagctccaacaacaataacaccaatgtgacagtggatgatatcgtggaagagtgcaaga |
113 |
Q |
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| T |
46752914 |
gaaaaaggtccaaaagatttactaggactaatgatagaagctagctccaacaacaacaacaccaatgtgacagtggatgatatcgtggaagagtgcaaga |
46753013 |
T |
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| Q |
114 |
gctttttctttgcaggcaaacaaaccacatcaaacttgctgacgtggacgaccattcccttagcaatgcacccacaatggcaagtacaggcacgtgatga |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
46753014 |
gctttttctttgcaggcaaacaaaccacatcaaacttgctgacgtggacgaccattctcttagcaatgcacccacaatggcaagtacaggcacgtgatga |
46753113 |
T |
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| Q |
214 |
ggtcctaaagatgtgtgggtcacgtgaccttccaactaaagatcatgttgtaaagcttaagacggtaagccaaaggcagccc |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46753114 |
ggtcctaaagatgtgtgggtcacgtgaccttccaactaaagatcatgttgtaaagcttaagacggtaagccaaaggcagccc |
46753195 |
T |
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