View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2808_low_12 (Length: 298)

Name: NF2808_low_12
Description: NF2808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2808_low_12
NF2808_low_12
[»] chr7 (38 HSPs)
chr7 (15-207)||(24909495-24909687)
chr7 (15-207)||(24895188-24895379)
chr7 (22-94)||(49060479-49060556)
chr7 (20-64)||(1417238-1417282)
chr7 (20-99)||(5369743-5369825)
chr7 (15-103)||(24895418-24895503)
chr7 (15-53)||(25507334-25507372)
chr7 (20-53)||(25558243-25558276)
chr7 (20-53)||(25558441-25558474)
chr7 (20-64)||(9527142-9527186)
chr7 (266-298)||(24909404-24909436)
chr7 (20-99)||(27548197-27548281)
chr7 (20-64)||(31002735-31002779)
chr7 (26-99)||(33894557-33894634)
chr7 (20-64)||(40689038-40689082)
chr7 (16-64)||(46104660-46104708)
chr7 (267-298)||(24894761-24894792)
chr7 (21-64)||(30456503-30456546)
chr7 (21-99)||(30496638-30496721)
chr7 (20-63)||(36537895-36537938)
chr7 (20-99)||(40530461-40530540)
chr7 (24-98)||(45813236-45813315)
chr7 (21-63)||(1432017-1432059)
chr7 (20-93)||(5006561-5006639)
chr7 (22-64)||(18516303-18516345)
chr7 (20-62)||(28340896-28340938)
chr7 (21-63)||(38010689-38010731)
chr7 (24-92)||(28340452-28340525)
chr7 (15-60)||(39518807-39518852)
chr7 (24-99)||(5373159-5373239)
chr7 (20-64)||(12110334-12110378)
chr7 (20-64)||(17989075-17989119)
chr7 (20-64)||(23721480-23721524)
chr7 (20-99)||(28634984-28635068)
chr7 (34-94)||(35007543-35007603)
chr7 (20-56)||(36874017-36874053)
chr7 (38-94)||(39345422-39345478)
chr7 (20-64)||(47046160-47046204)
[»] chr1 (36 HSPs)
chr1 (15-68)||(15361683-15361736)
chr1 (20-99)||(17269184-17269268)
chr1 (20-64)||(25006086-25006130)
chr1 (20-64)||(28467359-28467403)
chr1 (21-64)||(7218127-7218170)
chr1 (23-70)||(29007771-29007818)
chr1 (33-99)||(13037798-13037864)
chr1 (19-64)||(30371122-30371167)
chr1 (21-99)||(6110220-6110300)
chr1 (20-64)||(27738232-27738276)
chr1 (21-68)||(2487850-2487897)
chr1 (13-64)||(10581122-10581173)
chr1 (20-62)||(25005849-25005891)
chr1 (20-61)||(4078201-4078242)
chr1 (15-64)||(48830123-48830172)
chr1 (20-64)||(5592737-5592781)
chr1 (20-64)||(8130410-8130454)
chr1 (20-64)||(9656624-9656668)
chr1 (16-52)||(37241870-37241906)
chr1 (20-64)||(45205042-45205086)
chr1 (20-64)||(49517044-49517088)
chr1 (20-51)||(12564926-12564957)
chr1 (21-64)||(27887171-27887214)
chr1 (23-62)||(28938078-28938117)
chr1 (22-99)||(2152192-2152272)
chr1 (20-58)||(29045964-29046002)
chr1 (20-61)||(5421972-5422013)
chr1 (24-57)||(23902123-23902156)
chr1 (22-51)||(28689508-28689537)
chr1 (16-64)||(4200203-4200251)
chr1 (20-64)||(15515515-15515559)
chr1 (22-50)||(17422992-17423020)
chr1 (20-60)||(25479559-25479599)
chr1 (67-99)||(42397697-42397729)
chr1 (20-64)||(42556683-42556727)
chr1 (34-99)||(45107557-45107626)
[»] chr8 (37 HSPs)
chr8 (20-99)||(29973015-29973099)
chr8 (20-99)||(1561213-1561292)
chr8 (21-92)||(1470909-1470985)
chr8 (20-64)||(34770866-34770910)
chr8 (20-95)||(42597339-42597419)
chr8 (20-99)||(2091700-2091779)
chr8 (20-91)||(11059747-11059816)
chr8 (15-62)||(12361168-12361215)
chr8 (15-97)||(28769386-28769473)
chr8 (20-58)||(9834841-9834879)
chr8 (20-62)||(24558829-24558871)
chr8 (15-64)||(6864506-6864555)
chr8 (20-61)||(7645955-7645996)
chr8 (15-52)||(35869823-35869860)
chr8 (20-99)||(4558732-4558816)
chr8 (35-99)||(5290575-5290639)
chr8 (42-99)||(8536123-8536184)
chr8 (20-99)||(31884528-31884612)
chr8 (36-99)||(40868205-40868271)
chr8 (19-63)||(43704429-43704473)
chr8 (20-63)||(8062499-8062542)
chr8 (20-62)||(10460579-10460621)
chr8 (20-94)||(33697009-33697083)
chr8 (15-61)||(38874623-38874669)
chr8 (24-53)||(11056723-11056752)
chr8 (20-53)||(12132818-12132851)
chr8 (23-64)||(29262929-29262970)
chr8 (132-173)||(43208290-43208331)
chr8 (20-64)||(787158-787202)
chr8 (35-63)||(5088823-5088851)
chr8 (20-64)||(6509355-6509399)
chr8 (20-64)||(7918825-7918869)
chr8 (20-68)||(9836906-9836954)
chr8 (20-64)||(11415128-11415172)
chr8 (24-64)||(16210942-16210982)
chr8 (20-64)||(27728073-27728117)
chr8 (20-64)||(31862467-31862511)
[»] chr5 (34 HSPs)
chr5 (20-68)||(34205209-34205257)
chr5 (14-95)||(18704082-18704167)
chr5 (20-101)||(34117588-34117671)
chr5 (20-100)||(41017666-41017745)
chr5 (20-99)||(31030182-31030264)
chr5 (13-64)||(19138764-19138815)
chr5 (20-97)||(26209465-26209546)
chr5 (20-62)||(10272483-10272525)
chr5 (21-99)||(32059642-32059724)
chr5 (31-99)||(35135725-35135798)
chr5 (15-99)||(36539680-36539769)
chr5 (20-99)||(9202800-9202884)
chr5 (40-93)||(10771953-10772008)
chr5 (15-51)||(37588407-37588443)
chr5 (20-64)||(39823173-39823217)
chr5 (20-51)||(37526251-37526282)
chr5 (20-94)||(38047907-38047986)
chr5 (20-67)||(40159790-40159837)
chr5 (24-83)||(41016135-41016193)
chr5 (20-99)||(29588814-29588897)
chr5 (21-51)||(37690690-37690720)
chr5 (24-89)||(5563648-5563712)
chr5 (15-64)||(9634746-9634795)
chr5 (15-64)||(9703287-9703336)
chr5 (20-91)||(1619034-1619108)
chr5 (20-56)||(6587159-6587195)
chr5 (67-99)||(7096231-7096263)
chr5 (20-64)||(8158353-8158397)
chr5 (26-62)||(11473136-11473172)
chr5 (20-64)||(12975321-12975365)
chr5 (67-99)||(13224363-13224395)
chr5 (20-64)||(14295480-14295524)
chr5 (20-64)||(41277402-41277446)
chr5 (27-63)||(42181151-42181187)
[»] chr6 (32 HSPs)
chr6 (21-99)||(10452413-10452496)
chr6 (15-97)||(29274276-29274363)
chr6 (20-99)||(4006648-4006732)
chr6 (20-88)||(7485120-7485185)
chr6 (20-63)||(2117378-2117421)
chr6 (22-64)||(5550106-5550148)
chr6 (23-99)||(32917160-32917233)
chr6 (26-67)||(6310282-6310323)
chr6 (16-69)||(10400238-10400291)
chr6 (20-64)||(1402970-1403014)
chr6 (20-99)||(6647323-6647405)
chr6 (25-97)||(31828968-31829040)
chr6 (21-68)||(1844405-1844452)
chr6 (26-99)||(1904754-1904827)
chr6 (26-99)||(1908987-1909060)
chr6 (20-96)||(9093608-9093689)
chr6 (15-64)||(9604823-9604872)
chr6 (15-64)||(11340672-11340721)
chr6 (20-61)||(25100020-25100061)
chr6 (31-64)||(27595630-27595663)
chr6 (23-64)||(27693494-27693535)
chr6 (20-64)||(281900-281944)
chr6 (26-99)||(1810361-1810436)
chr6 (20-64)||(2027458-2027502)
chr6 (67-99)||(4247738-4247770)
chr6 (20-64)||(5623130-5623174)
chr6 (20-64)||(22742340-22742384)
chr6 (20-56)||(24838795-24838831)
chr6 (67-99)||(31461612-31461644)
chr6 (67-99)||(31668789-31668821)
chr6 (132-164)||(31828913-31828945)
chr6 (20-64)||(33828620-33828664)
[»] chr4 (40 HSPs)
chr4 (21-64)||(49219113-49219156)
chr4 (17-64)||(8130148-8130195)
chr4 (28-64)||(4071856-4071892)
chr4 (20-64)||(24091437-24091481)
chr4 (21-56)||(11842197-11842232)
chr4 (36-94)||(55437354-55437415)
chr4 (20-99)||(30207623-30207706)
chr4 (21-99)||(51197534-51197612)
chr4 (27-64)||(13949903-13949940)
chr4 (15-52)||(24444024-24444061)
chr4 (14-99)||(36823939-36824022)
chr4 (24-64)||(10192258-10192298)
chr4 (20-64)||(24160547-24160591)
chr4 (20-99)||(32920452-32920534)
chr4 (20-64)||(55870393-55870437)
chr4 (13-64)||(11802508-11802559)
chr4 (21-95)||(45128363-45128442)
chr4 (13-64)||(55372387-55372438)
chr4 (20-99)||(2980518-2980607)
chr4 (15-64)||(7368102-7368152)
chr4 (30-64)||(11917533-11917567)
chr4 (20-83)||(29778746-29778813)
chr4 (20-73)||(927257-927310)
chr4 (20-61)||(2996550-2996591)
chr4 (15-56)||(8468930-8468971)
chr4 (20-53)||(9841051-9841084)
chr4 (22-63)||(47119019-47119060)
chr4 (20-64)||(927450-927494)
chr4 (67-99)||(4191673-4191705)
chr4 (20-91)||(11698905-11698977)
chr4 (24-64)||(18630654-18630694)
chr4 (33-88)||(21952906-21952966)
chr4 (38-97)||(22684586-22684650)
chr4 (61-97)||(25487643-25487679)
chr4 (20-64)||(25885833-25885877)
chr4 (20-64)||(40174537-40174581)
chr4 (67-99)||(47970252-47970284)
chr4 (20-60)||(49085967-49086007)
chr4 (20-64)||(52735096-52735140)
chr4 (20-64)||(53626750-53626794)
[»] chr3 (43 HSPs)
chr3 (21-95)||(20669562-20669636)
chr3 (20-97)||(41056978-41057056)
chr3 (21-99)||(1395605-1395688)
chr3 (20-70)||(51510245-51510295)
chr3 (23-64)||(32555036-32555077)
chr3 (15-70)||(10540539-10540594)
chr3 (15-62)||(48807684-48807731)
chr3 (20-94)||(21367611-21367685)
chr3 (26-64)||(28779330-28779368)
chr3 (27-68)||(29771779-29771820)
chr3 (20-96)||(33674709-33674786)
chr3 (15-68)||(37689431-37689484)
chr3 (15-64)||(37788834-37788883)
chr3 (15-51)||(14548768-14548804)
chr3 (20-60)||(21872323-21872363)
chr3 (20-64)||(24235735-24235779)
chr3 (20-99)||(43116480-43116564)
chr3 (27-94)||(2865718-2865789)
chr3 (20-89)||(28306102-28306176)
chr3 (23-69)||(35450559-35450605)
chr3 (61-99)||(42039093-42039131)
chr3 (20-93)||(42084303-42084381)
chr3 (26-99)||(43038765-43038842)
chr3 (20-62)||(43875624-43875666)
chr3 (20-62)||(45590640-45590682)
chr3 (22-64)||(51197790-51197832)
chr3 (15-64)||(23315600-23315649)
chr3 (20-64)||(23530236-23530281)
chr3 (20-53)||(32109362-32109395)
chr3 (20-61)||(35246643-35246684)
chr3 (23-64)||(35364266-35364307)
chr3 (27-99)||(44374703-44374780)
chr3 (23-64)||(48397620-48397661)
chr3 (23-63)||(2201103-2201143)
chr3 (15-59)||(2318623-2318667)
chr3 (20-64)||(3467440-3467484)
chr3 (20-64)||(10101528-10101572)
chr3 (20-64)||(10212453-10212497)
chr3 (22-70)||(10526241-10526289)
chr3 (15-51)||(21865563-21865599)
chr3 (20-64)||(33405219-33405263)
chr3 (20-95)||(40122805-40122884)
chr3 (67-99)||(41028955-41028987)
[»] chr2 (36 HSPs)
chr2 (20-64)||(11513872-11513916)
chr2 (20-99)||(35755554-35755638)
chr2 (26-99)||(25609730-25609808)
chr2 (20-96)||(17952753-17952834)
chr2 (20-68)||(43141841-43141889)
chr2 (16-99)||(30990422-30990505)
chr2 (20-95)||(39983281-39983360)
chr2 (23-64)||(33944579-33944620)
chr2 (20-64)||(5043612-5043656)
chr2 (20-60)||(6993776-6993816)
chr2 (20-64)||(18066102-18066146)
chr2 (21-94)||(29430695-29430772)
chr2 (28-64)||(31740019-31740055)
chr2 (20-64)||(33942124-33942168)
chr2 (20-59)||(13869147-13869186)
chr2 (20-63)||(29643468-29643511)
chr2 (21-64)||(43199388-43199431)
chr2 (21-55)||(1899881-1899915)
chr2 (30-64)||(3423830-3423864)
chr2 (23-69)||(9750915-9750961)
chr2 (20-97)||(18179292-18179370)
chr2 (21-63)||(22681238-22681280)
chr2 (20-62)||(37276722-37276764)
chr2 (26-64)||(43173196-43173234)
chr2 (33-86)||(1160809-1160862)
chr2 (23-99)||(3673741-3673822)
chr2 (20-57)||(25800810-25800847)
chr2 (20-64)||(1625874-1625918)
chr2 (20-64)||(6988089-6988133)
chr2 (20-52)||(7862739-7862771)
chr2 (20-64)||(9886287-9886330)
chr2 (20-99)||(28933758-28933842)
chr2 (20-64)||(37292399-37292443)
chr2 (20-64)||(40889482-40889526)
chr2 (67-99)||(41033054-41033086)
chr2 (20-52)||(42621617-42621649)
[»] scaffold0024 (1 HSPs)
scaffold0024 (21-99)||(27510-27593)
[»] scaffold0044 (1 HSPs)
scaffold0044 (23-99)||(52005-52076)
[»] scaffold0654 (1 HSPs)
scaffold0654 (13-99)||(6682-6773)
[»] scaffold0014 (1 HSPs)
scaffold0014 (13-99)||(116601-116692)
[»] scaffold0590 (1 HSPs)
scaffold0590 (34-99)||(1140-1210)
[»] scaffold0275 (1 HSPs)
scaffold0275 (34-99)||(2765-2835)
[»] scaffold0549 (2 HSPs)
scaffold0549 (15-64)||(1771-1820)
scaffold0549 (15-64)||(3861-3910)
[»] scaffold0100 (1 HSPs)
scaffold0100 (13-50)||(42604-42641)
[»] scaffold0015 (1 HSPs)
scaffold0015 (27-64)||(69002-69039)


Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 24909687 - 24909495
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcactaaaacatgataaagt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24909687 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcactaaaacatgataaagt 24909588  T
Q  115 cttattgatgtttatcgtataagcgcttaattaagttgtttataaaaacaaggttttagtacttctgagttcaactttatgggacagatatcc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24909587 cttattgatgtttatcgtataagcgcttaattaagttgtttatcaaaacaaggttttagtactcctgagttcaactttatgggacagatatcc 24909495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 24895379 - 24895188
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcactaaaacatgataaagt 114  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||| ||||||||||    
T  24895379 aatatcttgtgaaaacaacttatagcttatatgaaaataatttgactttactttt-gttaacgaaatagcttatagataatcactaaaatatgataaagt 24895281  T
Q  115 cttattgatgtttatcgtataagcgcttaattaagttgtttataaaaacaaggttttagtacttctgagttcaactttatgggacagatatcc 207  Q
    |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||  |||||| || |||||||||||||||||| |||||||    
T  24895280 cttattgatgtttatcctataagagcttaattaagttgtttatcaaaacaaggttccagtactcctaagttcaactttatgggactgatatcc 24895188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 49060556 - 49060479
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaataatttgac-----tttactttttgttaaagaaatagcttatacataa 94  Q
    |||||||| |||||||||||||||| |||||||||||||     |||| ||||||||| |||||||||||||||||||    
T  49060556 tatgaaaataacttatagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataa 49060479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 1417282 - 1417238
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  1417282 cttatgaaaacaacttattgcttatatgaaaacaatttgacttta 1417238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 5369743 - 5369825
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact---ttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||| |||||||| |||||||||| | |||||||   ||| ||||| ||| |||| |||||||||||||||||||    
T  5369743 cttatgaaaacagcttatagcatatatgaaaacagtttgactttattaattttttttatagaattagcttatacataagcact 5369825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 24895503 - 24895418
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcactaaaa 103  Q
    |||| ||||| ||||| || |||||||||| ||||||||||||| |||   ||||| ||||||||||| ||| || |||||||||||||    
T  24895503 aataacttattaaaaccacatatagcttatttgaaaataatttgtctt---ttttttttaaagaaataacttgtatataagcactaaaa 24895418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 25507372 - 25507334
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaata 53  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  25507372 aataacttatgaaaacaacttatagcttatatgaaaata 25507334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 25558243 - 25558276
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaata 53  Q
    ||||||||||||||||||||||||||||||||||    
T  25558243 cttatgaaaacaacttatagcttatatgaaaata 25558276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 25558441 - 25558474
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaata 53  Q
    ||||||||||||||||||||||||||||||||||    
T  25558441 cttatgaaaacaacttatagcttatatgaaaata 25558474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 9527142 - 9527186
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||    
T  9527142 cttatgaaaacaacttatagtttatatgaaaacagtttgacttta 9527186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 24909436 - 24909404
Alignment:
Q  266 gttgacagtgatgaaaactaaaagctttagcta 298  Q
    |||||||||||||||||||||||||||||||||    
T  24909436 gttgacagtgatgaaaactaaaagctttagcta 24909404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 27548281 - 27548197
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||| ||||||||||| ||||||| |||| ||||||| |     ||||| ||| ||||||||||||| |||||||||    
T  27548281 cttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagataagcact 27548197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 31002779 - 31002735
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||| |||||| ||||||||||||||||||||| ||||||||||    
T  31002779 cttatcaaaacagcttatagcttatatgaaaatattttgacttta 31002735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 33894634 - 33894557
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgactt----tactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| || |||||||||||||| | ||||||||    ||  |||||||| ||||||||||||||||||||||||    
T  33894634 aaaacaacataaagcttatatgaaaacagtttgacttattttatcttttgttatagaaatagcttatacataagcact 33894557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 40689038 - 40689082
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||||    
T  40689038 cttatgaacacagcttatagcttatatgaaaataatttaacttta 40689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 46104660 - 46104708
Alignment:
Q  16 atatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||| ||||||||||||||||||||||||||||  ||||| |||||    
T  46104660 atatcttttgaaaacaacttatagcttatatgaaaactatttgtcttta 46104708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 298
Target Start/End: Complemental strand, 24894792 - 24894761
Alignment:
Q  267 ttgacagtgatgaaaactaaaagctttagcta 298  Q
    ||||||||||||||||||||||||||||||||    
T  24894792 ttgacagtgatgaaaactaaaagctttagcta 24894761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 30456503 - 30456546
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||    
T  30456503 ttatgaaaaccacttataacttatatgaaaacaatttgacttta 30456546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 30496721 - 30496638
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||| ||||| ||||| ||||| |||||||||||| |     |||||||| |||||||| |||||||||| ||||    
T  30496721 ttatgaaaacaacctataggttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacact 30496638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 36537938 - 36537895
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    ||||||||||||  | ||||||||||||||||||||||||||||    
T  36537938 cttatgaaaacacttcatagcttatatgaaaataatttgacttt 36537895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 40530461 - 40530540
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||| ||||||||||||||||| | | |||| ||| || |||||  |||||| | | ||||||||||||||||||||||    
T  40530461 cttattaaaacaacttatagcttttgtaaaaacaatctgtctttatgttttgtcacacaaatagcttatacataagcact 40530540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 45813236 - 45813315
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcac 98  Q
    |||||||||||||||| ||||||||||| || ||||||||| |     ||||| || |||||||||||||| ||||||||    
T  45813236 tgaaaacaacttatagattatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataagcac 45813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 1432017 - 1432059
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    ||||||||||| || |||||||||||||||||||||| |||||    
T  1432017 ttatgaaaacagctgatagcttatatgaaaataatttaacttt 1432059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 5006561 - 5006639
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacata 93  Q
    ||||||||||||| ||||| |||||||||||| | |||||||||| |     |||||||| || |||||||||||||||    
T  5006561 cttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 18516303 - 18516345
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||||||||||||||||| | ||||||||||||    
T  18516303 tatggaaacaacttatagcttatatgaacacaatttgacttta 18516345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 28340896 - 28340938
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||||||||||| |||||||||||||||| || ||||||||||    
T  28340896 cttatgaaaacagcttatagcttatatgacaacaatttgactt 28340938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 38010731 - 38010689
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  38010731 ttatgaaaacagcttatagcttatatgaaaacaatttggcttt 38010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 28340452 - 28340525
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgactttactt-----tttgttaaagaaatagcttatacat 92  Q
    ||||||||||||||| |||| ||||||| | |||||||||| ||     |||||| ||||||||||||||||||    
T  28340452 tgaaaacaacttataacttacatgaaaacagtttgactttattttattgtttgttgaagaaatagcttatacat 28340525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 39518852 - 39518807
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgac 60  Q
    |||| ||||||||||||||||| |||||||||| ||| ||||||||    
T  39518852 aatagcttatgaaaacaacttaaagcttatatgcaaacaatttgac 39518807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 5373239 - 5373159
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||||| ||||||| |||||  || ||||||| |     |||||||| ||||||||| ||||||||||||||    
T  5373239 tgaaaacaacttataacttatataaaaatgtttggactttattttatcttttgttatagaaatagcatatacataagcact 5373159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 12110378 - 12110334
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| |||||||||||||  |||| ||||||||||||    
T  12110378 cttatgaaaacagcttatagcttataccaaaacaatttgacttta 12110334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 17989075 - 17989119
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||| |||||| ||||||||||| | ||||||||||    
T  17989075 cttatgaaaacaaattatagtttatatgaaaacagtttgacttta 17989119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 23721524 - 23721480
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  23721524 cttataaaaacaacttatagtttaaatgaaaatagtttgacttta 23721480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 28635068 - 28634984
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaata-----atttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||| ||||||||| ||||||||||     |||| ||||||  |||||||||| ||||| |||||| |||| ||||    
T  28635068 cttatgaaaacaatttatagcttctatgaaaatagttatattttactttatcttttgttaaaaaaatatcttatagataaacact 28634984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 35007603 - 35007543
Alignment:
Q  34 ttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataa 94  Q
    |||||||||| ||||||| ||||| | ||||  ||| |||| |||||||||||||||||||    
T  35007603 ttatagcttacatgaaaacaattttattttatctttagttatagaaatagcttatacataa 35007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 36874017 - 36874053
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatt 56  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  36874017 cttaagaaaacaacttatagcttataagaaaataatt 36874053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 39345478 - 39345422
Alignment:
Q  38 agcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataa 94  Q
    |||||||||||||| | ||||||| ||  ||||||||  ||||||||||||||||||    
T  39345478 agcttatatgaaaacagtttgactctatcttttgttactgaaatagcttatacataa 39345422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 47046160 - 47046204
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||   |||||||||||||| ||||||||||||    
T  47046160 cttatgaaaacaactcggagcttatatgaaaacaatttgacttta 47046204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 15361736 - 15361683
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15361736 aatatcttatgaaaacagcttatagcttatatgaaaataatttgactttacttt 15361683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17269268 - 17269184
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |     |||||||  ||||||| ||||||||||||||||    
T  17269268 cttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcact 17269184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 25006086 - 25006130
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  25006086 cttatgaaaacaacttatagcttatatgaaaacaatttgacttta 25006130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 28467359 - 28467403
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  28467359 cttatgaaaacaacttgtagcttatatgaaaataatttgacttta 28467403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 7218127 - 7218170
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  7218127 ttatgaaaacaacttatagcttatatgaaaacaatttgacttta 7218170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 29007771 - 29007818
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgactttacttttt 70  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  29007771 atgaaaacaacttatagcttatatgaaaatagtttgactttaattttt 29007818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 13037864 - 13037798
Alignment:
Q  33 cttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||| |  ||||| |||||||||||||  |||||||| ||||||||||||||||||||||||    
T  13037864 cttatagctgacttgaaactaatttgactttatcttttgttatagaaatagcttatacataagcact 13037798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 30371167 - 30371122
Alignment:
Q  19 tcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  30371167 tcttatgaaaacaacttatagcttatatgaaaacaatttgagttta 30371122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 6110220 - 6110300
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttactttt-tg-ttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||||| |||| ||||||| ||||||| |||  |||| || ||| ||||||||||||||||||||||||    
T  6110220 ttatgaaaacaacttataccttaaatgaaaacaatttgaatttgtttttctgtttatagaaatagcttatacataagcact 6110300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 27738232 - 27738276
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  27738232 cttatgaaaacaaattatagcttatatgaaaacaatttgacttta 27738276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 2487850 - 2487897
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  2487850 ttatgaaaataacttatagcttatatccaaataatttgactttacttt 2487897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 10581122 - 10581173
Alignment:
Q  13 ataatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| |||||||||||||||||||||||| ||||||| | ||||||||||    
T  10581122 ataatagcttatgaaaacaacttatagcttaaatgaaaaaagtttgacttta 10581173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 25005849 - 25005891
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  25005849 cttatgaaaacaacttatagcttatatgaaaacaagttgactt 25005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 4078201 - 4078242
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact 61  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  4078201 cttatgaaaacaacttatagattatatgaaaatagtttgact 4078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 48830123 - 48830172
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||||||||    
T  48830123 aatagcttatgaaaacagtttatagcttatatgaaaatagtttgacttta 48830172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5592737 - 5592781
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||||||| || |||| |||||||    
T  5592737 cttatgaaaacaacttatagcttatatgacaacaattcgacttta 5592781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 8130454 - 8130410
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||    
T  8130454 cttatgaaaacaacttatagcttatgtgaaaacagtttgacttta 8130410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9656668 - 9656624
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||||    
T  9656668 cttatgaacacagcttatagcttatatgaaaataatttaacttta 9656624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 37241870 - 37241906
Alignment:
Q  16 atatcttatgaaaacaacttatagcttatatgaaaat 52  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37241870 atatcttatgaaaacaacttctagcttatatgaaaat 37241906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 45205086 - 45205042
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||    
T  45205086 cttatgaaaacaacttctagcttatatggaaatagtttgacttta 45205042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 49517088 - 49517044
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||    
T  49517088 cttatgaaaacagcttatagcttaaatgaaaacaatttgacttta 49517044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 12564926 - 12564957
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaa 51  Q
    ||||||||||||||||||||||||||||||||    
T  12564926 cttatgaaaacaacttatagcttatatgaaaa 12564957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 27887171 - 27887214
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||    
T  27887171 ttatgaaaacaacttatagcttatatggaaattgtttgacttta 27887214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 28938117 - 28938078
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  28938117 atgaaaacaacttatagcgtatatgaaaatgatttgactt 28938078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 2152272 - 2152192
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaataatttgactttacttt---ttgttaaagaaatagcttatacataagcact 99  Q
    ||||||| || |||||| ||||||| |||||| ||| ||||||| ||   |||| | ||||||||||||||||||||||||    
T  2152272 tatgaaaccaccttataacttatattaaaatagtttcactttacattatcttgtcatagaaatagcttatacataagcact 2152192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 29045964 - 29046002
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttg 58  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  29045964 cttatgaaaacaacttatagcttatatgagaacaatttg 29046002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 5421972 - 5422013
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact 61  Q
    ||||| |||||||||||||||||||| ||||| |||||||||    
T  5421972 cttatcaaaacaacttatagcttataagaaaacaatttgact 5422013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 23902123 - 23902156
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataattt 57  Q
    ||||||||||||||||||||||||||||| ||||    
T  23902123 tgaaaacaacttatagcttatatgaaaattattt 23902156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 28689508 - 28689537
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaa 51  Q
    ||||||||||||||||||||||||||||||    
T  28689508 tatgaaaacaacttatagcttatatgaaaa 28689537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 4200251 - 4200203
Alignment:
Q  16 atatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||| ||||||||  ||||||||||||||||| || |||||||||    
T  4200251 atatcttacgaaaacaatatatagcttatatgaaaacaacttgacttta 4200203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 15515559 - 15515515
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||| ||||| | ||||| ||||    
T  15515559 cttatgaaaacaacttatagcttatacgaaaacattttgatttta 15515515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 17422992 - 17423020
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaa 50  Q
    |||||||||||||||||||||||||||||    
T  17422992 tatgaaaacaacttatagcttatatgaaa 17423020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 25479599 - 25479559
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgac 60  Q
    ||||||||||||||||||||| |||||||| | ||||||||    
T  25479599 cttatgaaaacaacttatagcctatatgaagacaatttgac 25479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 42397729 - 42397697
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  42397729 ttttgttacagaaatagcttatacataagcact 42397697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 42556683 - 42556727
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||||| ||| || ||||| ||||    
T  42556683 cttatgaaaacaacttatagcttatataaaagtagtttgatttta 42556727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 45107626 - 45107557
Alignment:
Q  34 ttatagcttatatgaaaataatttgacttta----ctttttgttaaagaaatagcttatacataagcact 99  Q
    ||||| |||||||||||||| ||||||||||     ||||| ||| |||||||||||||| |||||||||    
T  45107626 ttataacttatatgaaaatagtttgactttattttatttttcttatagaaatagcttatagataagcact 45107557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 29973099 - 29973015
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttt-----tgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| |||      |||||||||||||||||||| |||||||||    
T  29973099 cttatgaaaacaacttatagcttatgtgaaaatagtttgactttattttaccttgtgttaaagaaatagcttatatataagcact 29973015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 1561292 - 1561213
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||| |||||||||| |||| ||||||| ||||  ||| |||| ||||||| ||||||||||||||||    
T  1561292 cttatgaaaacaacttgtagcttatattaaaacaatttgagtttatctttcgttatagaaataacttatacataagcact 1561213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 1470909 - 1470985
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacat 92  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| |     |||| ||| |||||||||||||||||    
T  1470909 ttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34770910 - 34770866
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  34770910 cttatgaaaacaacttatagcttaaatgaaaacaatttgacttta 34770866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 42597419 - 42597339
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataag 95  Q
    |||||||||||||||||||||||  ||||||| ||||| |||||| |     |||||||| ||||||||||||||||||||    
T  42597419 cttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 2091779 - 2091700
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||| |||||||||| |||| ||||||| |||   ||| |||| ||||||| |||||||| |||||||    
T  2091779 cttatgaaaacaacttgtagcttatattaaaacaatttgagtttgtatttcgttatagaaataacttatacacaagcact 2091700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 11059747 - 11059816
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttataca 91  Q
    |||||||||||||| ||||||||||||| ||| |||||||| ||| ||||||||| ||| ||||||||||||    
T  11059747 cttatgaaaacaacctatagcttatatg-aaacaatttgacctta-tttttgttatagagatagcttataca 11059816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 12361215 - 12361168
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  12361215 aataacttatgaaaacagcttatagcttatatgaaaacaatttgactt 12361168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 28769386 - 28769473
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttactt-----tttgttaaagaaatagcttatacataagca 97  Q
    |||| |||||||||||| ||||||||||||| ||||||| |||||||| | ||     ||||||| || |||||||||||||||||||    
T  28769386 aatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgttataggaatagcttatacataagca 28769473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 9834841 - 9834879
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttg 58  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  9834841 cttatgaaaacaacttatagcttatatgaaaacaatttg 9834879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 24558871 - 24558829
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||||||||||||||||||||||||| ||||||||||| ||||    
T  24558871 cttatgaaaacaacttatagcttatacgaaaataatttaactt 24558829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 6864506 - 6864555
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||||||||||    
T  6864506 aatagcttatgaaaacaacttataacttacatgaaaatagtttgacttta 6864555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 7645996 - 7645955
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact 61  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  7645996 cttatgaaaacaacttatagcttacatgaaaacaatttgact 7645955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 35869860 - 35869823
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaat 52  Q
    |||| |||||||||||||||||||||||||||||||||    
T  35869860 aatagcttatgaaaacaacttatagcttatatgaaaat 35869823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4558816 - 4558732
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||| ||||| |||||||| |||||||||||||||| |||||| |     |||| ||| ||||||||||||||||||| ||||    
T  4558816 cttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacact 4558732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 5290639 - 5290575
Alignment:
Q  35 tatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||| ||||||| | ||||||| |  | ||||||| ||||||||||||||||||||||||    
T  5290639 tatagcttacatgaaaacagtttgactattttatttgttatagaaatagcttatacataagcact 5290575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 8536123 - 8536184
Alignment:
Q  42 tatatgaaaataatttgactttactttt----tgttaaagaaatagcttatacataagcact 99  Q
    |||||||||| |||||||||| ||||||    ||||| ||||||||||||||||||||||||    
T  8536123 tatatgaaaacaatttgacttcacttttattttgttatagaaatagcttatacataagcact 8536184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 31884612 - 31884528
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaa-----taatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||| ||||||||||||||||||      ||||||| ||||  |||||||| ||||||| |||||||||| |||||    
T  31884612 cttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcact 31884528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 40868205 - 40868271
Alignment:
Q  36 atagcttatatgaaaataatttgactttactttttgt---taaagaaatagcttatacataagcact 99  Q
    |||||||||||||||| |||| ||||||| ||||| |   || ||||||||||||||||||||||||    
T  40868205 atagcttatatgaaaacaattcgactttattttttttatttacagaaatagcttatacataagcact 40868271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 43704429 - 43704473
Alignment:
Q  19 tcttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||    
T  43704429 tcttatgaaaacaacttatagtttatatgaaaacagtttgacttt 43704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 8062542 - 8062499
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    ||||||| |||| ||||||||||||||||||| |||||||||||    
T  8062542 cttatgagaacatcttatagcttatatgaaaacaatttgacttt 8062499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 10460621 - 10460579
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||    
T  10460621 cttatgaaaaccacttatagcttgtatgaaaatagtttgactt 10460579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 33697009 - 33697083
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataa 94  Q
    ||||| ||||||  |||||| |||||| | || ||||||||||||  |||||||| |||||||||||||| ||||    
T  33697009 cttataaaaacagtttatagattatatcagaacaatttgactttatcttttgttatagaaatagcttatatataa 33697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 38874669 - 38874623
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgact 61  Q
    |||| |||||||||||| |||| |||||||||||||| |||||||||    
T  38874669 aatagcttatgaaaacagcttagagcttatatgaaaagaatttgact 38874623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 11056723 - 11056752
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaata 53  Q
    ||||||||||||||||||||||||||||||    
T  11056723 tgaaaacaacttatagcttatatgaaaata 11056752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 12132851 - 12132818
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaata 53  Q
    |||||||||||| |||||||||||||||||||||    
T  12132851 cttatgaaaacagcttatagcttatatgaaaata 12132818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 29262929 - 29262970
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| || |||| |||||||||||||||||||||||||||    
T  29262929 atgaaatcagcttacagcttatatgaaaataatttgacttta 29262970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 43208290 - 43208331
Alignment:
Q  132 tataagcgcttaattaagttgtttataaaaacaaggttttag 173  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  43208290 tataagcacttaattaagttgtttatacaaacaaggctttag 43208331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 787158 - 787202
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||  ||||||||||||||| || ||||||||||||    
T  787158 cttatgaaaacagtttatagcttatatgataacaatttgacttta 787202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 5088851 - 5088823
Alignment:
Q  35 tatagcttatatgaaaataatttgacttt 63  Q
    |||||||||||||||||||||||||||||    
T  5088851 tatagcttatatgaaaataatttgacttt 5088823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 6509355 - 6509399
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| |||||||||||||| || | ||||||||||||    
T  6509355 cttatgaaaacagcttatagcttatataaatacaatttgacttta 6509399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 7918825 - 7918869
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||| | ||||| ||||| ||||||    
T  7918825 cttatgaaaacaacttatagcttacaagaaaaaaatttaacttta 7918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 9836906 - 9836954
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    ||||||||||||  || || |||||||||||||| ||||||||||||||    
T  9836906 cttatgaaaacaggttgtaacttatatgaaaatagtttgactttacttt 9836954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 11415172 - 11415128
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| | |||| ||||||| |||||||||||||||||    
T  11415172 cttatgaaaacagcgtataacttatataaaaataatttgacttta 11415128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 16210942 - 16210982
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||||| ||| | ||||||    
T  16210942 tgaaaacaacttatagcttatatgaaaacaatgtaacttta 16210982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 27728073 - 27728117
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||| |||  ||||||||||||| ||||||||||    
T  27728073 cttatgaaaacaactaatactttatatgaaaatagtttgacttta 27728117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 31862511 - 31862467
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| ||||||||||||| || |||| ||||||||||    
T  31862511 cttatgaaaacatcttatagcttatacgagaatagtttgacttta 31862467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 34205257 - 34205209
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34205257 cttatgaaaacaacttatagcttatataaaaataatttgactttacttt 34205209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 18704082 - 18704167
Alignment:
Q  14 taatatcttatgaaaacaacttatagcttatatgaaaataatttgactttact----ttttgttaaagaaatagcttatacataag 95  Q
    ||||| ||||||||||||||||||||||||||| ||||||  ||||||||| |    |||||||| ||||||| ||||||||||||    
T  18704082 taatagcttatgaaaacaacttatagcttatataaaaatagcttgactttatttatcttttgttatagaaataacttatacataag 18704167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 34117588 - 34117671
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatt--tgactttactttttgttaaagaaatagcttatacataagcactaa 101  Q
    ||||||||| |||||||||||||||||| |||||||   | | ||||  |||||||||||||||| ||||||||||||||||||    
T  34117588 cttatgaaagcaacttatagcttatatgtaaataataccttattttatcttttgttaaagaaataacttatacataagcactaa 34117671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 41017745 - 41017666
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcacta 100  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| |||||||||  ||||||| ||| ||||||| ||||    
T  41017745 cttatgaaaacaacttatagcttataggaaaatggtttgacttta-tttttgttatggaaatagtttacacataaggacta 41017666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 31030182 - 31030264
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactt---tttgttaaagaaatagcttatacataagcact 99  Q
    |||| |||||| ||||||||||||||||| || || ||||||||| ||   ||||||| | ||||||||||||||||||||||    
T  31030182 cttaggaaaactacttatagcttatatgataacaacttgactttatttaaatttgttataaaaatagcttatacataagcact 31030264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 19138764 - 19138815
Alignment:
Q  13 ataatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| ||||||||||||||||||||||||| |||||| ||||||| ||||    
T  19138764 ataatagcttatgaaaacaacttatagcttatctgaaaacaatttgaattta 19138815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 26209465 - 26209546
Alignment:
Q  20 cttatgaaaacaacttatagcttata-tgaaaataatttgactttacttt---ttgttaaagaaatagcttatacataagca 97  Q
    |||||||||||| ||||||||||||| |||||| |||| ||||||| |||   |||||| ||||||| ||||||||||||||    
T  26209465 cttatgaaaacagcttatagcttatattgaaaacaattggactttattttatcttgttatagaaataacttatacataagca 26209546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 10272483 - 10272525
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  10272483 cttatgaaaacaacttatagcttatacgaaaacaatttgactt 10272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 32059642 - 32059724
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttactt----tttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||| ||||||||||||||||||| | |||||||||| ||    || |||| | ||| ||||||||||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttagttacaaaaacagcttatacataagcact 32059724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 35135725 - 35135798
Alignment:
Q  31 aacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||||||||||||| |||||||||| |     |||||||| ||||||| ||||||||||| ||||    
T  35135725 aacttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacact 35135798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 36539769 - 36539680
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||| ||||| |||||||||||||||||||||||||| |  ||||||||| |     ||||| |||| |||||||||| |||||||||||    
T  36539769 aataacttataaaaacaacttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcact 36539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 9202800 - 9202884
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||| ||||| ||||||||||||| ||||| |||||| |     ||||| || |||||||||||||| |||||||||    
T  9202800 cttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcact 9202884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 10771953 - 10772008
Alignment:
Q  40 cttatatgaaaataatttgactttac--tttttgttaaagaaatagcttatacata 93  Q
    |||||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||    
T  10771953 cttatatgaaaacaatttaactttacattttttgttatagaaatagcttatacata 10772008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 37588407 - 37588443
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaa 51  Q
    |||| ||||||||||||||||||||||||||||||||    
T  37588407 aataacttatgaaaacaacttatagcttatatgaaaa 37588443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 39823173 - 39823217
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| |||||||||||||| || ||||||||||    
T  39823173 cttatgaaaacaacttgtagcttatatgaaagtagtttgacttta 39823217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 37526251 - 37526282
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaa 51  Q
    ||||||||||||||||||||||||||||||||    
T  37526251 cttatgaaaacaacttatagcttatatgaaaa 37526282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 38047907 - 38047986
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataa 94  Q
    |||||||||||| | |||||  ||||||||||||||||||||||| |     |||||||| ||| |||||||||||||||    
T  38047907 cttatgaaaacagcatatagtatatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 40159837 - 40159790
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactt 67  Q
    ||||||||||| | ||||| |||||||||||| |||||||||||||||    
T  40159837 cttatgaaaacgatttataacttatatgaaaacaatttgactttactt 40159790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 41016193 - 41016135
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatag 83  Q
    |||||||||||||||||||||||||||| | ||||| |||| |||||| || ||||||||    
T  41016193 tgaaaacaacttatagcttatatgaaaacagtttgaattta-tttttgctatagaaatag 41016135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 29588897 - 29588814
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttg----actttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||| |||||||  |||||||||||||||||| |||||     | ||||  |||||||| ||||||||||||||||||||||||    
T  29588897 cttacgaaaacactttatagcttatatgaaaacaattttcattattttatattttgttatagaaatagcttatacataagcact 29588814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 37690690 - 37690720
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  37690690 ttatgaaaacaacttatagcttatatgaaaa 37690720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 5563712 - 5563648
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttata 89  Q
    |||||| ||| | ||||||||||||||||||||| | ||||  |||||||| ||||||||||||||    
T  5563712 tgaaaataacctttagcttatatgaaaataattt-attttatcttttgttatagaaatagcttata 5563648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 9634795 - 9634746
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||||||||||||| | |||||||||||| || |||||||    
T  9634795 aatagcttatgaaaacaacttataacatatatgaaaatacttcgacttta 9634746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 9703287 - 9703336
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| |||||||||||||||| ||||||||||||||  | ||||||||||    
T  9703287 aataacttatgaaaacaacttgtagcttatatgaaatgagtttgacttta 9703336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 1619108 - 1619034
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact---ttactttttgttaaagaaatagcttataca 91  Q
    |||||||||||| ||||||||||||| | ||| ||||| |||   ||| ||||||||  ||||||||||||||||    
T  1619108 cttatgaaaacagcttatagcttatacggaaagaatttaactttattattttttgttttagaaatagcttataca 1619034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 6587159 - 6587195
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatt 56  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  6587159 cttatgaaaacaacttatagcttatacgaaaacaatt 6587195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 7096231 - 7096263
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  7096231 ttttgttatagaaatagcttatacataagcact 7096263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 8158353 - 8158397
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||| || ||| |||||||||||||||||||| ||||||    
T  8158353 cttatgaaaataatttaaagcttatatgaaaataatttaacttta 8158397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 11473136 - 11473172
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  11473136 aaaacatcttatagtttatatgaaaataatttgactt 11473172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 12975365 - 12975321
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  12975365 cttatgaacacagcttatagcttatatgaaaacaatttgatttta 12975321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 13224395 - 13224363
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  13224395 ttttgttatagaaatagcttatacataagcact 13224363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 14295524 - 14295480
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||| ||||||||||||||||||| | ||||||||||    
T  14295524 cttacgaaaacagcttatagcttatatgaaaacagtttgacttta 14295480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 41277402 - 41277446
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| || |||||||||||| | ||||||||||    
T  41277402 cttatgaaaacaacttttaacttatatgaaaacagtttgacttta 41277446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 42181151 - 42181187
Alignment:
Q  27 aaacaacttatagcttatatgaaaataatttgacttt 63  Q
    |||||||||||||||||||||||||  ||||||||||    
T  42181151 aaacaacttatagcttatatgaaaaccatttgacttt 42181187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 10452413 - 10452496
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||| |     |||||||| ||||||||||||||||||||||||    
T  10452413 ttatggaaacaacttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcact 10452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 29274276 - 29274363
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagca 97  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||| |     ||||| || ||||||||||||||||||||||    
T  29274276 aatatcttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 4006732 - 4006648
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactt-----tttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||     ||||||| ||||||| ||||| ||||||||||    
T  4006732 cttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcact 4006648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 7485120 - 7485185
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttat 88  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||   |||| || |||||||||||||    
T  7485120 cttatgaaaacaacttatagcttatatgaaaaaaatttaacttta---tttgatacagaaatagcttat 7485185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 2117421 - 2117378
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  2117421 cttatgaaaacaacttatagattatatgaaaatagtttgacttt 2117378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 5550148 - 5550106
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  5550148 tatgaaaacagcttatagcttatatgaaaacaatttgacttta 5550106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 32917233 - 32917160
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||||||||||||||||||||   || | ||||  ||||| ||  |||||||||||||||||||||||    
T  32917233 atgaaaacaacttatagcttatatgaaaat---tttattttatcttttgctattgaaatagcttatacataagcact 32917160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 6310282 - 6310323
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgactttactt 67  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  6310282 aaaacaacttatagcttatatgaaaacaattagactttactt 6310323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 10400291 - 10400238
Alignment:
Q  16 atatcttatgaaaacaacttatagcttatatgaaaataatttgactttactttt 69  Q
    |||||||||||| ||| |||||||||||||||| || |||||||||||| ||||    
T  10400291 atatcttatgaagacatcttatagcttatatgataacaatttgactttattttt 10400238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 1403014 - 1402970
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||    
T  1403014 cttatgaaaacaatttatagcttatatgaaaatagtttaacttta 1402970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 6647405 - 6647323
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact---ttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||  ||||| | ||||| ||| ||||||||||||| |   |||||||| ||||||| ||||||||||||||||    
T  6647405 cttatgaaaacagattataacctatattaaagtaatttgactttattattttttgttatagaaataacttatacataagcact 6647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 31829040 - 31828968
Alignment:
Q  25 gaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagca 97  Q
    ||||||| |||||| |||||||||||||| ||||| |||| |||||| || ||||| ||||||| | ||||||    
T  31829040 gaaaacagcttataacttatatgaaaatagtttgattttattttttgatatagaaacagcttatgcgtaagca 31828968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 1844405 - 1844452
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    |||| ||||| |||| ||||||||||||||||| ||||||||||||||    
T  1844405 ttataaaaaccacttgtagcttatatgaaaatattttgactttacttt 1844452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 1904827 - 1904754
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||  |||||||||||| ||||||||||||||||| ||| | || |   |||||||||||||||| ||||    
T  1904827 aaaacaatctatagcttatataaaaataatttgactttattttatatttagttaatagcttatacataatcact 1904754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 1909060 - 1908987
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||  |||||||||||| ||||||||||||||||| ||| | || |   |||||||||||||||| ||||    
T  1909060 aaaacaatctatagcttatataaaaataatttgactttattttatatttagttaatagcttatacataatcact 1908987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 9093608 - 9093689
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagc 96  Q
    |||||||||||| ||||||||||||| ||||| ||||| |||||| |     ||||| || ||||||||||||| |||||||    
T  9093608 cttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagc 9093689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 9604872 - 9604823
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| |||||||||||| |||||||||||||  |||||||||| ||||||    
T  9604872 aataacttatgaaaacagcttatagcttatacaaaaataattttacttta 9604823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 11340672 - 11340721
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||| ||||||||||| ||||||||||||| || ||||||    
T  11340672 aatagcttatgaaaccaacttatagcgtatatgaaaataaattaacttta 11340721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 25100061 - 25100020
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact 61  Q
    ||||||||||||||||||| ||| |||||||| |||||||||    
T  25100061 cttatgaaaacaacttataacttctatgaaaacaatttgact 25100020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 27595630 - 27595663
Alignment:
Q  31 aacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| |||||||||||||||||||||||||||    
T  27595630 aacttacagcttatatgaaaataatttgacttta 27595663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 27693494 - 27693535
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| || |||| |||||||||||||||||||||||||||    
T  27693494 atgaaatcagcttacagcttatatgaaaataatttgacttta 27693535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 281900 - 281944
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||| ||| ||||||||||||||||||| || |||||||||    
T  281900 cttatgaacacagcttatagcttatatgaaaacaagttgacttta 281944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 1810361 - 1810436
Alignment:
Q  26 aaaacaacttatagcttatatgaaaata--atttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||| ||||||||||||||||||| |  |||| | ||||  |||||||| ||||||||||| | ||||||||||    
T  1810361 aaaacagcttatagcttatatgaaaacaatattttattttatcttttgttatagaaatagcttttgcataagcact 1810436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 2027458 - 2027502
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||| |||| ||||||| ||||||||||||| ||||||||||    
T  2027458 cttatgagaacagcttataggttatatgaaaatagtttgacttta 2027502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 4247738 - 4247770
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  4247738 ttttgttatagaaatagcttatacataagcact 4247770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 5623174 - 5623130
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||| |||||||||||  ||||| |||||    
T  5623174 cttatgaaaacaacttatagtttatatgaaaactatttggcttta 5623130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 22742384 - 22742340
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||| |||| | ||||||||||||||||||| ||||||||||||    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgacttta 22742340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 24838795 - 24838831
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatt 56  Q
    ||||||||| || ||||||||||||||||||||||||    
T  24838795 cttatgaaatcagcttatagcttatatgaaaataatt 24838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 31461644 - 31461612
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  31461644 ttttgttatagaaatagcttatacataagcact 31461612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 31668789 - 31668821
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  31668789 ttttgttatagaaatagcttatacataagcact 31668821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 31828945 - 31828913
Alignment:
Q  132 tataagcgcttaattaagttgtttataaaaaca 164  Q
    ||||||||||||||||||||||||||| |||||    
T  31828945 tataagcgcttaattaagttgtttatagaaaca 31828913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 33828664 - 33828620
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||| ||||||||||||| |||||| ||||| ||||||||||||    
T  33828664 cttattaaaacaacttataacttatacgaaaacaatttgacttta 33828620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 49219156 - 49219113
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  49219156 ttatgaaaacaacttatagcttatatgaaaataatttgacttta 49219113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 8130195 - 8130148
Alignment:
Q  17 tatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||    
T  8130195 tatcttatgaaaacagtttatagcttatatgaaaataatttgacttta 8130148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 4071892 - 4071856
Alignment:
Q  28 aacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||||||||||||||    
T  4071892 aacaacttatagcttatatgaaaataatttgacttta 4071856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 24091481 - 24091437
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||  |||||||||||||||||||||||||||||||    
T  24091481 cttatgaaaacagtttatagcttatatgaaaataatttgacttta 24091437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 11842232 - 11842197
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatt 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  11842232 ttatgaaaacaacttatagcttatatgaaaataatt 11842197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 55437354 - 55437415
Alignment:
Q  36 atagcttatatgaaaataatttgactttacttt---ttgttaaagaaatagcttatacataa 94  Q
    ||||||||||||||||||||||||||||| |||   |||||| |||||||||||||| ||||    
T  55437354 atagcttatatgaaaataatttgactttattttatattgttatagaaatagcttatagataa 55437415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 30207623 - 30207706
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttg----actttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||||||||||||||||||| | ||||    | |||| ||||||||| |||| || | ||||||||||||||    
T  30207623 cttatgaaaacaacttatagcttatatgaaaacagtttgatttattttattttttgttatagaactaacatatacataagcact 30207706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 51197534 - 51197612
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||  ||||||||||||||| ||| ||||| |||| ||||||| | ||||||   |||||||||||||||    
T  51197534 ttatgaaaacaatgtatagcttatatgaatatagtttgaatttattttttgtcacagaaatgttttatacataagcact 51197612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 13949903 - 13949940
Alignment:
Q  27 aaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  13949903 aaacaacttatagcttatatgaaaacaatttgacttta 13949940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 24444061 - 24444024
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaat 52  Q
    |||| |||||||||||||||||||||||||||||||||    
T  24444061 aatagcttatgaaaacaacttatagcttatatgaaaat 24444024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 36824022 - 36823939
Alignment:
Q  14 taatatcttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||| ||||||||| || ||||| ||||||||||||| ||||||| |||| ||| | ||| ||||||||||||||||||| ||||    
T  36824022 taatagcttatgaaatcagcttat-gcttatatgaaaacaatttgatttta-tttatattatagaaatagcttatacataatcact 36823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 10192298 - 10192258
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  10192298 tgaaaacaacttataacttatatgaaaacaatttgacttta 10192258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 24160547 - 24160591
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||    
T  24160547 cttatgaaaacaacttatagcttacatgaaaatagtttgaattta 24160591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 32920452 - 32920534
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttacttt---ttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||||||||||||| ||| ||||  ||||||||||| |||   |||||| | ||||||||||| ||||| ||||    
T  32920452 cttatgaaaacaacttatagcttctattaaaacgatttgactttattttatcttgttataaaaatagcttatccataaacact 32920534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 55870393 - 55870437
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||    
T  55870393 cttatgaaaacaacttatagcttatgtgaaaacagtttgacttta 55870437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 11802559 - 11802508
Alignment:
Q  13 ataatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| |||||||||||||||| |||||||| ||| || ||||||||||||    
T  11802559 ataatagcttatgaaaacaacttgtagcttatgtgagaaaaatttgacttta 11802508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 45128363 - 45128442
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttacttt-----ttgttaaagaaatagcttatacataag 95  Q
    |||||||||||| ||||||||||||||| |||||||||| || | |||     |||||| |||||||| |||||||||||    
T  45128363 ttatgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataag 45128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 55372387 - 55372438
Alignment:
Q  13 ataatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| ||||||||||| |||||||||| |||||| |||| ||||||||||    
T  55372387 ataatagcttatgaaaactacttatagctcatatgataatagtttgacttta 55372438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 2980518 - 2980607
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttacttt----------ttgttaaagaaatagcttatacataagcact 99  Q
    ||||||| ||||||||||| ||| |||||||||| |||||||||| |||          |||||| ||||||||||||||||||||||||    
T  2980518 cttatgagaacaacttataacttgtatgaaaatagtttgactttattttgtttcattttttgttatagaaatagcttatacataagcact 2980607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 7368102 - 7368152
Alignment:
Q  15 aatatcttatgaaaacaacttata-gcttatatgaaaataatttgacttta 64  Q
    |||| |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  7368102 aatagcttatggaaacaacttataagcttatatgaaaacaatttgacttta 7368152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 11917567 - 11917533
Alignment:
Q  30 caacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||| ||||||||||||||||||||||||    
T  11917567 caacttataggttatatgaaaataatttgacttta 11917533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 29778813 - 29778746
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta----ctttttgttaaagaaatag 83  Q
    ||||||||||||||||| |||||||||||||| ||||| || |||     ||||||||||||||||||    
T  29778813 cttatgaaaacaacttacagcttatatgaaaacaatttcaccttaatttatttttgttaaagaaatag 29778746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 927310 - 927257
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgtt 73  Q
    |||| |||||||||||||| |||||||| ||| |||||||||||| ||| ||||    
T  927310 cttaagaaaacaacttataacttatatggaaacaatttgactttattttatgtt 927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 2996591 - 2996550
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact 61  Q
    ||||||||||||||||||| ||||||| |||| |||||||||    
T  2996591 cttatgaaaacaacttataacttatataaaaacaatttgact 2996550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 8468971 - 8468930
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatt 56  Q
    |||| ||||||||||||||| |||||||||||||||| ||||    
T  8468971 aataacttatgaaaacaactaatagcttatatgaaaaaaatt 8468930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 9841084 - 9841051
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaata 53  Q
    |||||||||||| |||||||||||||||||||||    
T  9841084 cttatgaaaacatcttatagcttatatgaaaata 9841051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 47119019 - 47119060
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    |||||| ||||||||||||||||||||||| ||||| |||||    
T  47119019 tatgaatacaacttatagcttatatgaaaacaatttaacttt 47119060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 927494 - 927450
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||| |||||| |||||||||||||||||| | ||||||||||    
T  927494 cttatgcaaacaagttatagcttatatgaaaacagtttgacttta 927450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 4191705 - 4191673
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  4191705 ttttgttatagaaatagcttatacataagcact 4191673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 11698977 - 11698905
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-ttttgttaaagaaatagcttataca 91  Q
    |||||||||||||||| || | |||||||||||| ||||||||| || |||| ||| ||||||  ||||||||    
T  11698977 cttatgaaaacaacttctaacatatatgaaaatagtttgacttttctctttttttatagaaatcacttataca 11698905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 18630694 - 18630654
Alignment:
Q  24 tgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||||||  | |||||||||    
T  18630694 tgaaaacaacttatagcttatatgaaaaccaattgacttta 18630654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 21952966 - 21952906
Alignment:
Q  33 cttatagcttatatgaaaataatttgac-----tttactttttgttaaagaaatagcttat 88  Q
    ||||||||||||||||||| ||||||||     ||||||| |||||| |||||||||||||    
T  21952966 cttatagcttatatgaaaacaatttgactttattttacttgttgttatagaaatagcttat 21952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 22684586 - 22684650
Alignment:
Q  38 agcttatatgaaaataatttgactttactt-----tttgttaaagaaatagcttatacataagca 97  Q
    |||||||||||||| |||||||||||| ||     ||||||| |||||||||||||||| |||||    
T  22684586 agcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagca 22684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 25487643 - 25487679
Alignment:
Q  61 tttactttttgttaaagaaatagcttatacataagca 97  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  25487643 tttattttttgttatagaaatagcttatacataagca 25487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 25885877 - 25885833
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||| | ||||| ||||| ||||||    
T  25885877 cttatgaaaacaacttatagcttacacgaaaacaatttaacttta 25885833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 40174581 - 40174537
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| |||||||||| |||||||| ||||| ||||||    
T  40174581 cttatgaaaacagcttatagcttttatgaaaacaatttaacttta 40174537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 47970284 - 47970252
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  47970284 ttttgttatagaaatagcttatacataagcact 47970252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 49086007 - 49085967
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgac 60  Q
    ||||||||||||||||||| ||| |||||||||| ||||||    
T  49086007 cttatgaaaacaacttataacttgtatgaaaatagtttgac 49085967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 52735140 - 52735096
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||| |||| ||||||||||| |||||||||||||    
T  52735140 cttacgaaaacaacatataacttatatgaaagtaatttgacttta 52735096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 53626794 - 53626750
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| ||||||||||||||||||| | ||||| ||||    
T  53626794 cttatgaaaacagcttatagcttatatgaaaacattttgaattta 53626750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 20669636 - 20669562
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataag 95  Q
    |||||||||| | |||||||||||||||||| ||||| ||||   ||||||||| ||||||||||||||||||||    
T  20669636 ttatgaaaacgaattatagcttatatgaaaacaatttaacttgtatttttgttatagaaatagcttatacataag 20669562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 41057056 - 41056978
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta-ctttttgttaaagaaatagcttatacataagca 97  Q
    |||||||||||||||||||||||||||||||| || || | |||| ||||||  |||||||||||||||||| ||||||    
T  41057056 cttatgaaaacaacttatagcttatatgaaaacaaattaattttatcttttttctaaagaaatagcttatacttaagca 41056978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 1395688 - 1395605
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||  | ||||||||||||||||||||||||||||| |     |||||||| |||||||||||||||||| |||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcact 1395605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 51510245 - 51510295
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttacttttt 70  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  51510245 cttatgaaaacaacttatagtttatatcaaaataattttactttacttttt 51510295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 32555036 - 32555077
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  32555036 atgaaaacaacttatagcttataggaaaataatttgacttta 32555077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 10540539 - 10540594
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttacttttt 70  Q
    |||| |||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  10540539 aatagcttatgaaaacaacttatagtttatataaaattaatttgactttatttttt 10540594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 48807731 - 48807684
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  48807731 aataacttatgaaaacaacttatagcttctatgaaaatagtttgactt 48807684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 21367685 - 21367611
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataa 94  Q
    |||||||||||||||||||  ||||| ||||| ||||| |||||| |||||| || ||| ||| |||||||||||    
T  21367685 cttatgaaaacaacttatacattatacgaaaacaatttaactttattttttgctatagagatatcttatacataa 21367611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 28779368 - 28779330
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28779368 aaaacaacttatagcttatatgaaaatagtttgacttta 28779330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 29771820 - 29771779
Alignment:
Q  27 aaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  29771820 aaacaacttatagtttatatgaaaataatttcactttacttt 29771779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 33674709 - 33674786
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactt-tttgttaaagaaatagcttatacataagc 96  Q
    |||||||||||| ||||||| ||||||| ||| ||||| |||||  || ||||||| |||||||||||||| ||||||    
T  33674709 cttatgaaaacagcttatagtttatatgcaaaaaatttaactttttttgtttgttatagaaatagcttataaataagc 33674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 37689431 - 37689484
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    |||| |||||||||| |  |||||||||||||||||||||||| ||||||||||    
T  37689431 aatagcttatgaaaatagtttatagcttatatgaaaataatttaactttacttt 37689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 37788883 - 37788834
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| |||||||||||||||||||| ||||| |||||||||| |||||||    
T  37788883 aatagcttatgaaaacaacttatagattatacgaaaataattggacttta 37788834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 14548768 - 14548804
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaa 51  Q
    |||| ||||||||||||||||||||||||||||||||    
T  14548768 aataacttatgaaaacaacttatagcttatatgaaaa 14548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21872323 - 21872363
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgac 60  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  21872323 cttatgaaaacaacttatagcttatatcaaaaaaatttgac 21872363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 24235735 - 24235779
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||    
T  24235735 cttatgaaaacaacttatagcttatattcaaatagtttgacttta 24235779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 43116480 - 43116564
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaa-----taatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||| ||||||||||||||||||||     | |||||| ||||  |||||||| |||||||||||| |||||| ||||    
T  43116480 cttatgaaaacgacttatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacact 43116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 2865718 - 2865789
Alignment:
Q  27 aaacaacttatagcttatatgaaaataatttgactttactt----tttgttaaagaaatagcttatacataa 94  Q
    ||||||||||||| ||||||||||| |||||||||||  ||    ||||||| |||||||||||||| ||||    
T  2865718 aaacaacttataggttatatgaaaacaatttgactttgttttaactttgttatagaaatagcttatatataa 2865789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 28306176 - 28306102
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgac-----tttactttttgttaaagaaatagcttata 89  Q
    |||||||||||||||| || |||||||||||| | ||||||     |||||||||||||| ||| ||||||||||    
T  28306176 cttatgaaaacaacttgtaacttatatgaaaacagtttgactttattttactttttgttatagagatagcttata 28306102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 35450605 - 35450559
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgactttactttt 69  Q
    ||||||||||||||||||||||| ||||| ||||| |||||| ||||    
T  35450605 atgaaaacaacttatagcttataagaaaacaattttactttattttt 35450559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 42039131 - 42039093
Alignment:
Q  61 tttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  42039131 tttattttttgttacagaaatagcttatacataagcact 42039093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 42084303 - 42084381
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactt-----tttgttaaagaaatagcttatacata 93  Q
    ||||||||||||||| ||||||||||| |||| || ||||| ||| ||     ||||||| ||||||||||||||||||    
T  42084303 cttatgaaaacaactaatagcttatatcaaaacaagttgacattattttatcctttgttatagaaatagcttatacata 42084381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 43038765 - 43038842
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgac-----tttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||||||||| ||||| ||||||     |||||||||||| | ||||||| ||| ||||||||||||    
T  43038765 aaaacaacttatagcttatatg-aaatagtttgacttaattttactttttgtcatagaaataacttgtacataagcact 43038842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 43875666 - 43875624
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    ||||||||||||||||||||||||||||| || | ||||||||    
T  43875666 cttatgaaaacaacttatagcttatatgagaacagtttgactt 43875624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 45590682 - 45590640
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    ||||||||||||||||||| ||||||||||||||  |||||||    
T  45590682 cttatgaaaacaacttatatcttatatgaaaatagattgactt 45590640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 51197790 - 51197832
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||| |||||||||||| |||||| |||||    
T  51197790 tatgaaaacaacttataacttatatgaaaacaatttgtcttta 51197832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 23315649 - 23315600
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| |||||| ||||| |||||||| |||||||||| ||||||||||||    
T  23315649 aatagcttatggaaacatcttatagcctatatgaaaacaatttgacttta 23315600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 23530236 - 23530281
Alignment:
Q  20 cttatgaaaacaacttatagcttatatg-aaaataatttgacttta 64  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||    
T  23530236 cttatgaaaacaacttatactttatatgaaaaataatttgacttta 23530281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 32109362 - 32109395
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaata 53  Q
    ||||||||||||||||||||||| ||||||||||    
T  32109362 cttatgaaaacaacttatagcttgtatgaaaata 32109395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 35246643 - 35246684
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgact 61  Q
    ||||| ||||||||||||||||||||| |||||| |||||||    
T  35246643 cttataaaaacaacttatagcttatataaaaatagtttgact 35246684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 35364307 - 35364266
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| ||||||| |||||||||| ||||||    
T  35364307 atgaaaacaacttataacttatataaaaataatttaacttta 35364266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 44374703 - 44374780
Alignment:
Q  27 aaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||| || ||| || |||||||| |||||||||||| |     |||||||||||| ||||||||||||||||||||    
T  44374703 aaacaaattttagattgtatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcact 44374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 48397661 - 48397620
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||| || |||| ||||||||||||    
T  48397661 atgaaaacaacttatagcttaaataaaaacaatttgacttta 48397620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 2201143 - 2201103
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    ||||||||| ||||||||||||||||||| | |||||||||    
T  2201143 atgaaaacagcttatagcttatatgaaaacagtttgacttt 2201103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 2318667 - 2318623
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttga 59  Q
    |||| ||||| |||||||||||||| ||||||||||| |||||||    
T  2318667 aataacttataaaaacaacttatagtttatatgaaaacaatttga 2318623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 3467440 - 3467484
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| |||||||||||||||  |||||||||| ||||||||||||    
T  3467440 cttacgaaaacaacttatagtctatatgaaaacaatttgacttta 3467484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 10101528 - 10101572
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| || |||||||||||| ||||| ||||||    
T  10101528 cttatgaaaacaacttttatcttatatgaaaacaatttaacttta 10101572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 10212453 - 10212497
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| || |||||||||||| ||||| ||||||    
T  10212453 cttatgaaaacaacttttatcttatatgaaaacaatttaacttta 10212497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 10526241 - 10526289
Alignment:
Q  22 tatgaaaacaacttatagcttatatgaaaataatttgactttacttttt 70  Q
    |||||| ||||||||||| |||||| ||| ||||||||||||| |||||    
T  10526241 tatgaacacaacttatagtttatataaaattaatttgactttatttttt 10526289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 21865599 - 21865563
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaa 51  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  21865599 aatagcttatcaaaacaacttatagcttatatgaaaa 21865563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 33405219 - 33405263
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| ||||||||||||||||||| || || ||||||    
T  33405219 cttatgaaaacagcttatagcttatatgaaaacaaattaacttta 33405263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 40122805 - 40122884
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataag 95  Q
    ||||| ||||||||||||||||| |||||||| | |||||||||| |     ||||||||  |||||||||||||||||||    
T  40122805 cttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 41028955 - 41028987
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  41028955 ttttgttatagaaatagcttatacataagcact 41028987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 11513916 - 11513872
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  11513916 cttatgaaaacaacttatagcttatatgaaaacaatttgacttta 11513872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 35755554 - 35755638
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta----ctttttg-ttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    || |||| ||| ||||||||||||||||||| ||||    
T  35755554 cttatgaaaacaacttatagcttacatgaaaacaatttgactttattttctatttgattatagaaatagcttatacataaacact 35755638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 25609808 - 25609730
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||||||| |||||||| ||||||||| |     |||| ||| ||||||||||||||||||||||||    
T  25609808 aaaacaacttatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcact 25609730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 17952753 - 17952834
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagc 96  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||| |     |||||||| |||||||||||||| ||||||    
T  17952753 cttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagc 17952834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 43141889 - 43141841
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttacttt 68  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  43141889 cttatgaaaacatcttatagcttatatggaaacaatttgactttacttt 43141841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 30990422 - 30990505
Alignment:
Q  16 atatcttatgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||||||||||| |||||||||||||  |||| || || | ||||   ||||||| ||||| ||||||||||||||||||    
T  30990422 atatcttatgaaaacagcttatagcttatacaaaaacaactttattttatcatttgttatagaaagagcttatacataagcact 30990505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 39983360 - 39983281
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttactt----tttgttaaagaaatagcttatacataag 95  Q
    ||||||||||||||||||||||||||||||||| |||| | |||| ||    ||||||| | |||||||||||| |||||    
T  39983360 cttatgaaaacaacttatagcttatatgaaaattattttattttattttacctttgttacaaaaatagcttatatataag 39983281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 33944620 - 33944579
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  33944620 atgaaaacaatttatagcttatatgaaaacaatttgacttta 33944579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5043612 - 5043656
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||    
T  5043612 cttatgaaaacaacttctagcttatatgaaaacagtttgacttta 5043656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 6993776 - 6993816
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgac 60  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  6993776 cttatgaaaacaacctatagcttatatgaatataatttgac 6993816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 18066146 - 18066102
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||    
T  18066146 cttatgaaaacagcttatagcttatatgaaaacaatttaacttta 18066102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 29430772 - 29430695
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttactt----tttgttaaagaaatagcttatacataa 94  Q
    |||||| |||| ||||||||||||| ||||| | |||||||||| ||    ||||||| |||||||||||||||||||    
T  29430772 ttatgagaacagcttatagcttataagaaaacagtttgactttatttaacttttgttatagaaatagcttatacataa 29430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 31740019 - 31740055
Alignment:
Q  28 aacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31740019 aacaacttatagcttatatgaaaatagtttgacttta 31740055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 33942168 - 33942124
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||    
T  33942168 cttatgaaaacaacttatagcttacatgaaaacagtttgacttta 33942124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 13869147 - 13869186
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttga 59  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  13869147 cttatgaaaacagcttatagcttagatgaaaataatttga 13869186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 29643468 - 29643511
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||    
T  29643468 cttatgaaaacagcttagagcttatatgaaagtaatttgacttt 29643511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 43199431 - 43199388
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||||    
T  43199431 ttatgaaaacaacttatagcttatacgaagataatttaacttta 43199388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 1899915 - 1899881
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataat 55  Q
    ||||||||||||||||||||||||| |||||||||    
T  1899915 ttatgaaaacaacttatagcttataagaaaataat 1899881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 3423830 - 3423864
Alignment:
Q  30 caacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||| ||||||||||||||||||||||||    
T  3423830 caacttataggttatatgaaaataatttgacttta 3423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 9750961 - 9750915
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgactttactttt 69  Q
    ||||||||||||||||||||||| ||||| ||||| |||||| ||||    
T  9750961 atgaaaacaacttatagcttataagaaaacaatttaactttattttt 9750915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 18179292 - 18179370
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaat-aatttgactttactttttgttaaagaaatagcttatacataagca 97  Q
    ||||||||| || ||||||||||||||||||||  |||||| |||| ||||| |||  |||| |||||| |||||||||    
T  18179292 cttatgaaagcagcttatagcttatatgaaaatgtatttgattttattttttcttattgaaacagcttaaacataagca 18179370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 22681238 - 22681280
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgacttt 63  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||    
T  22681238 ttatgaaaacagcttatagcttatatgaaaacaatttggcttt 22681280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 37276764 - 37276722
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactt 62  Q
    ||||||||||||||||||| |||||||||||| | ||||||||    
T  37276764 cttatgaaaacaacttataacttatatgaaaacagtttgactt 37276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 43173234 - 43173196
Alignment:
Q  26 aaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  43173234 aaaacaaaatatagcttatatgaaaataatttgacttta 43173196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 1160809 - 1160862
Alignment:
Q  33 cttatagcttatatgaaaataatttgactttactttttgttaaagaaatagctt 86  Q
    ||||||||||||||||||||| |||||||||| ||| || || ||||| |||||    
T  1160809 cttatagcttatatgaaaatagtttgactttattttatgctatagaaacagctt 1160862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 3673822 - 3673741
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||| |||||||| |||||||||||| ||||| |||||| |     |||||||| ||||||| || |||||||||||||    
T  3673822 atgaaaaaaacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcact 3673741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 25800847 - 25800810
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataattt 57  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  25800847 cttatgaaaacagcttatagcttatatgaaaacaattt 25800810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 1625918 - 1625874
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  1625918 cttatgaaaacaacttataacttatacgaaaacaatttaacttta 1625874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 6988133 - 6988089
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||||||||||||||||| ||  || ||||||||||||||||||    
T  6988133 cttatgaaaacaacttataactagtaagaaaataatttgacttta 6988089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 7862771 - 7862739
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaat 52  Q
    ||||||||| |||||||||||||||||||||||    
T  7862771 cttatgaaaccaacttatagcttatatgaaaat 7862739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9886330 - 9886287
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||    
T  9886330 cttaggaaaacaacttatagcttatatg-aaatagtttgacttta 9886287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 28933842 - 28933758
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgactttacttt-----ttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||| ||||| |||| ||||||||||||||| || | |||     |||||| | ||||||||||||||| ||||||    
T  28933842 cttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatacatgagcact 28933758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 37292399 - 37292443
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| |||||||||| |||||||||||||||||| ||| ||||||    
T  37292399 cttaagaaaacaactaatagcttatatgaaaatagttttacttta 37292443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 40889526 - 40889482
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||||||||||||||||||| |||||   ||||||||||||||||    
T  40889526 cttatgaaaacaacttatagattatacacaaataatttgacttta 40889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 41033054 - 41033086
Alignment:
Q  67 ttttgttaaagaaatagcttatacataagcact 99  Q
    |||||||| ||||||||||||||||||||||||    
T  41033054 ttttgttatagaaatagcttatacataagcact 41033086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 42621649 - 42621617
Alignment:
Q  20 cttatgaaaacaacttatagcttatatgaaaat 52  Q
    ||||||||||||||||||| |||||||||||||    
T  42621649 cttatgaaaacaacttataacttatatgaaaat 42621617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 27593 - 27510
Alignment:
Q  21 ttatgaaaacaacttatagcttatatgaaaataatttgactttact-----ttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| |     || ||||| ||||||| ||||||||||||||||    
T  27593 ttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcact 27510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 52005 - 52076
Alignment:
Q  23 atgaaaacaacttatagcttatatgaaaataatttgactttactttttgttaaagaaatagcttatacataagcact 99  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||  |||||     |||||||||||||||||||||||    
T  52005 atgaaaacagcttatagcttatatgaaaacaatttcactttatattttg-----gaaatagcttatacataagcact 52076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 6682 - 6773
Alignment:
Q  13 ataatatcttatgaaaacaacttatagcttatatgaaaataatttgactt-----tactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||| ||||| |||||||||| || | | |||||||| ||||||||||     || ||||||||| |||||||| |||||||||||||||    
T  6682 ataataacttatcaaaacaacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcact 6773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 116601 - 116692
Alignment:
Q  13 ataatatcttatgaaaacaacttatagcttatatgaaaataatttgactt-----tactttttgttaaagaaatagcttatacataagcact 99  Q
    |||||| ||||| |||||||||| || | | |||||||| ||||||||||     || ||||||||| |||||||| |||||||||||||||    
T  116601 ataataacttatcaaaacaacttttaacctctatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcact 116692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 1140 - 1210
Alignment:
Q  34 ttatagcttatatgaaaataatttgactttacttt-----ttgttaaagaaatagcttatacataagcact 99  Q
    |||| |||||||||| |||| |||||||||| |||     |||||| ||||||||||||||||||||||||    
T  1140 ttatggcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcact 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 2835 - 2765
Alignment:
Q  34 ttatagcttatatgaaaataatttgactttacttt-----ttgttaaagaaatagcttatacataagcact 99  Q
    |||| |||||||||| |||| |||||||||| |||     |||||| ||||||||||||||||||||||||    
T  2835 ttatggcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcact 2765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 1771 - 1820
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||| ||||||||||| ||||||||||||| || ||||||    
T  1771 aatagcttatgaaaccaacttatagcgtatatgaaaataaattaacttta 1820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 3861 - 3910
Alignment:
Q  15 aatatcttatgaaaacaacttatagcttatatgaaaataatttgacttta 64  Q
    |||| ||||||||| ||||||||||| ||||||||||||| || ||||||    
T  3861 aatagcttatgaaaccaacttatagcgtatatgaaaataaattaacttta 3910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 42641 - 42604
Alignment:
Q  13 ataatatcttatgaaaacaacttatagcttatatgaaa 50  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  42641 ataatagcttatgaaaacaactaatagcttatatgaaa 42604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 69002 - 69039
Alignment:
Q  27 aaacaacttatagcttatatgaaaataatttgacttta 64  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  69002 aaacagcttattgcttatatgaaaataatttgacttta 69039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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