View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2808_low_13 (Length: 281)
Name: NF2808_low_13
Description: NF2808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2808_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 24107209 - 24106965
Alignment:
| Q |
1 |
tgcgatgttctatgaacaaattggattatctccttcacttttttccgttcttattttctctcttttgatgaaaaggtgaagaaggttagaatgataataa |
100 |
Q |
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| T |
24107209 |
tgcgatgttctatgaacaaattggattatctccttcactttttttcgttcttattttctctcttttgatgaaaaggtgaagaaggttagaatgataataa |
24107110 |
T |
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| Q |
101 |
tcaatcatagaagattgagtgtaattttcatcgtttattagttggttgtttttaaccatttacgggaatagaagaaattatgcgttcgagaatttgagga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24107109 |
tcaatcatagaagattgagtgtaattttcatcgtttattagttggttgtttttaaccatttacgggaatagaagaaattatgcgttcgagaatttgagga |
24107010 |
T |
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| Q |
201 |
tataaatgaacgacgtcaagctgaatttcttggtctctgttgtgg |
245 |
Q |
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|| ||||||||||||||||||||||||||||||||| |||||||| |
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| T |
24107009 |
tagaaatgaacgacgtcaagctgaatttcttggtctttgttgtgg |
24106965 |
T |
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