View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2810_high_27 (Length: 384)
Name: NF2810_high_27
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 11 - 342
Target Start/End: Complemental strand, 10504743 - 10504412
Alignment:
| Q |
11 |
aatatatatgagagttgaagaattcaaagctttgatgtgatgtcattcaattttgaaacctaatcatttgtatatggttcccaggtggtataggtttacc |
110 |
Q |
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| T |
10504743 |
aatatatatgagagttgaagaattcaaagctttgatgtgatgtcattcaattttgaaacctaatcatttgtatatggttcccaggtggtataggtttacc |
10504644 |
T |
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| Q |
111 |
ttctcaaccaaacccataaacaacatacacttctttagatcattcttcatcaaagacttggcttaaaaaggaatatgatatagtggtatatattcatcta |
210 |
Q |
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| T |
10504643 |
ttctcaaccaaacccataaacaacatacacttctttagatcattcttcatcaaagacttggcttaaaaaggaatatgatatagtggtatatattcatcta |
10504544 |
T |
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| Q |
211 |
tgttgtatgaagctcatgtagcaaacaagagagacaagtgttcttaggagattccattgtaccttctctcaaatcaagtctatattctaaaaaagatccc |
310 |
Q |
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| T |
10504543 |
tgttgtatgaagctcatgtagcaaacaagagagacaagtgttcttaggagattccattgtaccttctctcaaatcaagtctatattctaaaaaagatccc |
10504444 |
T |
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| Q |
311 |
taattatcacaaccttagttgtaacatcaacg |
342 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
10504443 |
taattatcacaaccttagttgtaacatcaacg |
10504412 |
T |
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