View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2810_high_63 (Length: 246)
Name: NF2810_high_63
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_high_63 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 34650304 - 34650070
Alignment:
| Q |
1 |
ttttgttttgcatagtcatacagactcgacatgcaaacaaaagcatgaatagcagcaattctcacaaacccaagatgcttcagtttttcatgatcatttc |
100 |
Q |
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| T |
34650304 |
ttttgttttgcatagtcatacagactcgacatgcaaacaaaagcatgaatagcagcaattctcacaaacccaagatgcttcagtttttcatgatcatttc |
34650205 |
T |
|
| Q |
101 |
tctctacatccatctgcacaaattcaatgtataataaattattagatgagatctatattattattatagtaatatacgtgcat---tcatcatgcaatgt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
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| T |
34650204 |
tctctacatccatctgcacaaattcaatgtataataaattattagatgagatctatatta---ttatagtaatatacgtgcattcatcatcatgcaatgt |
34650108 |
T |
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| Q |
198 |
aaattaacctgtttggtggtggtcattgcttcctttgt |
235 |
Q |
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|||||||||||||||||||||||||||| ||||||||| |
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| T |
34650107 |
aaattaacctgtttggtggtggtcattgtttcctttgt |
34650070 |
T |
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