View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2810_high_72 (Length: 237)
Name: NF2810_high_72
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_high_72 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 45900566 - 45900427
Alignment:
| Q |
18 |
tgatctttgtatgaactgtgaactcaaaatctaaactcagcttttaagttgagatatcttcagcgtgtcaaacactgttgacggttatggatagactctc |
117 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45900566 |
tgatccttgtatgaactgtgaactcaaaatctaaactcagcttttaagttgagatatcttcagcgtgtcaaacactgttgacggttatggatagactctc |
45900467 |
T |
|
| Q |
118 |
ttcaaattaaagttaactccttcaacaaatttaggctctc |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45900466 |
ttcaaattaaagttaactccttcaacaaatttaggctctc |
45900427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University