View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2810_high_78 (Length: 235)
Name: NF2810_high_78
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_high_78 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 9645810 - 9646028
Alignment:
| Q |
1 |
aaatacaaatacatatatgtattgcagggttgtccaaattgctatatagtgtgaaggaacgtcctgagaactcacaaaagtggctaaataaaagccagat |
100 |
Q |
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| T |
9645810 |
aaatacaaatacatat--gtattgcagggttgtccaaattgctatatagtgtgaaggaacgtcctgagaactcacaaaagtggctaaataaaagccagat |
9645907 |
T |
|
| Q |
101 |
atagtggaaatttcttagcagtatgcttaagggaaaatgtccattttccataactggaataggattccaaagtagaaattccaatgtgttacagaaatac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9645908 |
atagtggaaatttcttagcagtatgcttaagggaaaatgtccattttccataactggaataggattccaaagtagaaattccaatgtgttacagaaatac |
9646007 |
T |
|
| Q |
201 |
ataatgtttacaagaaatttc |
221 |
Q |
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||||||||||||| ||||||| |
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| T |
9646008 |
ataatgtttacaaaaaatttc |
9646028 |
T |
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