View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2810_high_82 (Length: 228)
Name: NF2810_high_82
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_high_82 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 4082911 - 4082715
Alignment:
| Q |
10 |
catcatcaaccaccacgatctccacggcgaaaacaacaccctcttcatcaaccctgtgaccagcaccattcctaacactatagcccactatcacacacac |
109 |
Q |
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||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4082911 |
catcaccaaccaccacgacctccactgcgaaaacaacaccctcttcatcaaccctgtgaccagcaccattcctaacactatagcccactatcacacacac |
4082812 |
T |
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| Q |
110 |
tccatatcatccgaccaattatgctcggcggttgtccaagagacaactgcctccatcacagccgtttggtcagtggttcgccgcttcgacaaaccac |
206 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4082811 |
tccatatcatccgaccaattatgctcggcggtcgtccaagagacaaccgcctccatcacagccgtttggtcagtggttcgccgcttcgacaaaccac |
4082715 |
T |
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