View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2810_low_1 (Length: 824)
Name: NF2810_low_1
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_low_1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 599; Significance: 0; HSPs: 45)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 599; E-Value: 0
Query Start/End: Original strand, 15 - 633
Target Start/End: Original strand, 39380344 - 39380962
Alignment:
| Q |
15 |
cacagaccaaagcagttctgacagtgaaaataatggcatggaaagtaacatagtcatcctaacttaccagaaactttatttgcaaaacccagggcccgaa |
114 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
39380344 |
cacagaccaaagcagttttgacggtgaaaataatggcatggaaagtaacatagtcatcctaacttaccagaaactatatttgcaaaacccagggcccgaa |
39380443 |
T |
|
| Q |
115 |
acatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcag |
214 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39380444 |
acatctccatagctatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcag |
39380543 |
T |
|
| Q |
215 |
tagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttca |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39380544 |
tagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttca |
39380643 |
T |
|
| Q |
315 |
atattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtctcccttcttgcacagtggattaatcggtt |
414 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39380644 |
atattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtctcccttcttgcacagtggattaatcggtt |
39380743 |
T |
|
| Q |
415 |
tatgtattatatctaaaacaacttttgctggattaactagcatgttattgccatgtgactcaactgcaacagttttctcacttgtatccaactgcaaact |
514 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39380744 |
tatgtattatatctaaaacaacttttgctggattaactagcatgttattgccatgtgactcaactgcaacagttttctcacttgtatccaactgcaaact |
39380843 |
T |
|
| Q |
515 |
tgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcatatttatagaagcgtca |
614 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39380844 |
tgttcccccaatggtatgacttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcatatttatagaagcgtca |
39380943 |
T |
|
| Q |
615 |
gtaaatgatagtgacaata |
633 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
39380944 |
gtaaatgatagtgacaata |
39380962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 79 - 581
Target Start/End: Original strand, 39396566 - 39397086
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||| |||||||| | ||||||||||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
39396566 |
taccagaaactttatttgcaaaacccagggtctcaaacagctccatagctgtcttgtgctgagcaaccgatgcaaaaagctccaaaacttcatcttcatc |
39396665 |
T |
|
| Q |
179 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagt |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||| ||||| ||||||||| |||||||| || |
|
|
| T |
39396666 |
gaaagaagtaagcaatccataaattgacaaaagcaacaaaaaaccaagaaccgccaaagaattttcagtattttctctaatgtaagctctcaaatcatgt |
39396765 |
T |
|
| Q |
279 |
gctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacag |
378 |
Q |
| |
|
|||||| ||||||||||||||||||||||| | |||| | ||||||| ||||||||||| |||||||| ||||| ||||||| | || || |||| |
|
|
| T |
39396766 |
gctagcttcagtgcttcttctcttacacaaggtctaatagttggtgagattctcatcagttcttctagcacgtagatgtggctatcctcaataaccacac |
39396865 |
T |
|
| Q |
379 |
cattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat-taa-----ctagc------------atgtt |
460 |
Q |
| |
|
|||||||||||||||| ||||||||| |||| || || ||||||||||| ||||||| | ||| ||||| | | ||||| |||| |
|
|
| T |
39396866 |
cattgtctcccttcttacacagtggaataatggggttttgtattatatccaaaacaagtcttgatggatctgatgattctagcagataaacataaatgtc |
39396965 |
T |
|
| Q |
461 |
attgccatgtgactcaactgcaacagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgca |
560 |
Q |
| |
|
||||| | ||||||||||| || | ||||| ||||| | |||||||||||||||||||| |||||||| | |||||||| ||||||||||| |||||| |
|
|
| T |
39396966 |
attgcgaagtgactcaactccatcggttttatcactcatgtccaactgcaaacttgttccatcaatggtaggacttaatcggtcatccatgtaggatgca |
39397065 |
T |
|
| Q |
561 |
actgcatatttagatagcaga |
581 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
39397066 |
actgcatgtttagatagcaga |
39397086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 74 - 447
Target Start/End: Complemental strand, 39153332 - 39152959
Alignment:
| Q |
74 |
taacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatct |
173 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||||| | |||| || ||||||| |||||||| ||||||||||||||||| | ||||||| |
|
|
| T |
39153332 |
taacataccagaaactttatttgcaaaacccagggtccgaaatagttccacagcagtcttgtgttgagcaacaaatgcaaaaagctccaagacttcatct |
39153233 |
T |
|
| Q |
174 |
tcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaat |
273 |
Q |
| |
|
| |||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||| ||| ||||| ||||||||| ||| |||| | ||||||||||| |
|
|
| T |
39153232 |
ttatcgaaagaagtaaccaatccataaatcgacaaaaccagtagaaaaccaagaaccaccaaagaattttcagtattttcttttattttagctttcaaat |
39153133 |
T |
|
| Q |
274 |
caagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaat |
373 |
Q |
| |
|
|| |||| || ||| ||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||| |||| ||| | ||| |
|
|
| T |
39153132 |
catgtgcgagtttcaatgcttcttctcttacacaaggtttaatcttcggtgagattctcatcagttgttctagcagaaagatgcagctaccatctataat |
39153033 |
T |
|
| Q |
374 |
cacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
|||||||| |||||| ||||| || ||||| |||| || || ||||||||||| || |||| ||||||||||| |
|
|
| T |
39153032 |
cacagcatggtctccgttcttataccgtggaataattgggttctgtattatatccaacacaatttttgctggat |
39152959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 79 - 447
Target Start/End: Complemental strand, 39138911 - 39138546
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
|||| |||| |||||||||||||||||||| | ||||| |||| || | |||||||||||||||| |||| ||||||||||| | |||||||||||| |
|
|
| T |
39138911 |
tacctgaaagtttatttgcaaaacccagggtcttaaacagttccacagctgtcttgtgctgagcaacaaatgtgaaaagctccaagacttcatcttcatc |
39138812 |
T |
|
| Q |
179 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagt |
278 |
Q |
| |
|
||| ||||||||||| |||||| |||||||| ||||||||| || |||||| ||| ||||| ||||||||| | | |||| |||||||| || |||| |
|
|
| T |
39138811 |
aaaataagtaagcaattcataaactgacaaaatcagtagaaaaccgagaaccaccagagaattttcagtatt---tttcatgttagctttcagattaagt |
39138715 |
T |
|
| Q |
279 |
gctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacag |
378 |
Q |
| |
|
|||||| ||| |||||||||||||||| | || ||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || |||||||| |
|
|
| T |
39138714 |
gctagcttcaatgcttcttctcttacatcaggtttaatcttcggtgagattctcatcagttgttctagcagaaagatgcagccatcatcaataatcacag |
39138615 |
T |
|
| Q |
379 |
cattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
||| ||||| ||||| ||| ||||| |||| || || ||||||||||| ||||||||||||||||||| |
|
|
| T |
39138614 |
catgttctccattcttacaccgtggaataattggcttctgtattatatccaaaacaacttttgctggat |
39138546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 469 - 753
Target Start/End: Complemental strand, 39216517 - 39216227
Alignment:
| Q |
469 |
gtgactcaactgcaacagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcata |
568 |
Q |
| |
|
||||| ||||| || ||||||||| | |||| |||||||||||||||||| | ||| |||| || |||||| ||| |||||| |||||||||||||| | |
|
|
| T |
39216517 |
gtgacacaacttcatcagttttcttagttgtgtccaactgcaaacttgtttcgccagtggtgtgacttaattgataatccattaaagatgcaactgcaaa |
39216418 |
T |
|
| Q |
569 |
tttagatagcagatatttaagctccctcatatttatagaagcgtcagtaaatgatagtgacaataggta-----ttnnnnnnnncaa-tactatgcatga |
662 |
Q |
| |
|
|||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||| ||||||||| || || ||| |||||||||||| |
|
|
| T |
39216417 |
tttagatagcagatatttaacctcactcctatttatagaagcgtcggtaaatgataatgacaatagataggaatttagaaaaaacaaatactatgcatga |
39216318 |
T |
|
| Q |
663 |
atgtaagacatctcctagattgaaatatatgggtgacaaaagaaagcattatattaacagttacaatcaatgccaacagaacaccttaact |
753 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
39216317 |
atgtaagacatctcctagattgaaatatatgggtgacagaagaaagcattatactaacagttacaatcaatgtcaacacaacaccttaact |
39216227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 74 - 399
Target Start/End: Complemental strand, 39216930 - 39216605
Alignment:
| Q |
74 |
taacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatct |
173 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| | ||||| || |||| |||||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
39216930 |
taacataccagaaactttatttgcaaaacccagggtctcaaacagttcaatagctatcttgtgctgagcaacagatgcaaaaagctccaaaacttcatct |
39216831 |
T |
|
| Q |
174 |
tcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaat |
273 |
Q |
| |
|
||| | |||||||||| |||||||||||||||||||||||| ||||| || |||||| ||| ||||| || |||||| || || |||| || |||||||| |
|
|
| T |
39216830 |
tcaccaaaagaagtaaccaatccataaattgacaaaagcagaagaaaaccgagaaccaccaaagaatttttagtattttcactcatgttagatttcaaat |
39216731 |
T |
|
| Q |
274 |
caagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaat |
373 |
Q |
| |
|
||| ||||||| ||| ||||||||||||||||||| || ||||| ||||||| | ||||||||||||||||| | | || || |||| || ||| |
|
|
| T |
39216730 |
caaatgctagcttcaatgcttcttctcttacacaaggtttaatatgaggtgagattttcatcagttgttctagcgaataaatatggtaatcagcaataat |
39216631 |
T |
|
| Q |
374 |
cacagcattgtctcccttcttgcaca |
399 |
Q |
| |
|
||||||||||||||||||||| |||| |
|
|
| T |
39216630 |
cacagcattgtctcccttcttacaca |
39216605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 79 - 447
Target Start/End: Original strand, 39472678 - 39473052
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
|||| |||| ||||||||||||||||| || |||||||| |||| || |||||||||||||||||| ||||| || |||||||| | |||||||||||| |
|
|
| T |
39472678 |
tacctgaaagtttatttgcaaaacccaaggtccgaaacagttccacagctatcttgtgctgagcaacaaatgcgaagagctccaagacttcatcttcatc |
39472777 |
T |
|
| Q |
179 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagt |
278 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||| ||| | |||| | |||||||||||||| |
|
|
| T |
39472778 |
aaaagaagtaagcaattcataaattgacaaaagcagtagaaaaccaagaactaccaaagaattttcagtattttctttcatgttaactttcaaatcaagt |
39472877 |
T |
|
| Q |
279 |
gctagcgtcagtgcttcttctcttacac-------aatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaa |
371 |
Q |
| |
|
|| ||| ||| ||| |||| | |||||| |||||||| | |||||||| | ||||||| ||||| | |||||||||| |||| ||| || | |
|
|
| T |
39472878 |
gcgagcttcaatgcgtctttttttacacaagggctaatcttcagt-gacggtgagattttcatcagctgttccaacagaaagatgttgctaccatcaata |
39472976 |
T |
|
| Q |
372 |
atcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
|||||||||| |||||||||||| ||| ||||| ||||||| || |||||||||| | ||||| ||||||||||| |
|
|
| T |
39472977 |
atcacagcatggtctcccttcttacaccgtggaataatcgggttcagtattatatccagaacaaattttgctggat |
39473052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 86 - 448
Target Start/End: Original strand, 44895028 - 44895390
Alignment:
| Q |
86 |
aactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaa |
185 |
Q |
| |
|
|||||||| ||||||||| |||| |||||| | |||| || |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
44895028 |
aactttatgtgcaaaaccgagggtccgaaaaagttccacagctatcttgtgctgagcaacaaatgcaaaaagctccaaaacttcgccttcatcgaaagaa |
44895127 |
T |
|
| Q |
186 |
gtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcg |
285 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||| || |||||| |||||| || | | |||||||| |
|
|
| T |
44895128 |
gtaatcaatccataaattgacaaaagcagtagaaaaccaagaaccaccaaagaattttcagtatttccttttatgttagctttgaatttatgtgctagct |
44895227 |
T |
|
| Q |
286 |
tcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtc |
385 |
Q |
| |
|
||| ||||| ||||||||||| | || |||| | ||||| | || ||||||| |||||||||| ||||||| | ||||| || || || | ||||||| |
|
|
| T |
44895228 |
tcaatgcttgttctcttacacgaggtttaataattggtgacattcccatcagtgtttctagcagatagatgcgccaatcatcaataaccaaatcattgtc |
44895327 |
T |
|
| Q |
386 |
tcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggatt |
448 |
Q |
| |
|
||||||| | |||||| || | || || ||||||||||| ||||||| |||||| ||||| |
|
|
| T |
44895328 |
atccttcttactcagtggcatactagggttctgtattatatccaaaacaagttttgcaggatt |
44895390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 74 - 404
Target Start/End: Complemental strand, 39371390 - 39371060
Alignment:
| Q |
74 |
taacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatct |
173 |
Q |
| |
|
|||| |||||||| |||| || |||||||||| || | ||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||| |
|
|
| T |
39371390 |
taacataccagaagctttgttggcaaaacccatggttccaaacagctccatagctatcttgtgctcagcaacaaatgcaaaaagctccaaaagttcatct |
39371291 |
T |
|
| Q |
174 |
tcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaat |
273 |
Q |
| |
|
||||| |||||||||| |||||||||| |||||||||||| |||||| ||||||||| ||| || || || | |||| ||| | |||| ||||||| || |
|
|
| T |
39371290 |
tcatcaaaagaagtaaccaatccataatttgacaaaagcaatagaaaaccaagaaccaccaaaggatttttactattttctttcatgttggctttcatat |
39371191 |
T |
|
| Q |
274 |
caagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaat |
373 |
Q |
| |
|
||||||||||| ||| |||||| |||||||||||| |||||||| ||||||| | |||| |||||||||||||| | ||| || |||| || ||| |
|
|
| T |
39371190 |
caagtgctagcttcaatgcttcatctcttacacaaggctcaatatttggtgagattttcataagttgttctagcagcaggatttggtaatcagcaataat |
39371091 |
T |
|
| Q |
374 |
cacagcattgtctcccttcttgcacagtgga |
404 |
Q |
| |
|
||| |||||||||||||||| | ||||||| |
|
|
| T |
39371090 |
tacaacattgtctcccttcttactcagtgga |
39371060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 677 - 806
Target Start/End: Original strand, 39380963 - 39381092
Alignment:
| Q |
677 |
ctagattgaaatatatgggtgacaaaagaaagcattatattaacagttacaatcaatgccaacagaacaccttaactacaccatttgcaatatacttgac |
776 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39380963 |
ctagattgaaatatatgggtgacgaaagaaagcattatagtaacagttacaatcaatgccaacagaacaccttaactacaccatttgcaatatacttgaa |
39381062 |
T |
|
| Q |
777 |
aaattaaaactacattactatactactctt |
806 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
39381063 |
aaattaaaactacattactatactactctt |
39381092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 73 - 447
Target Start/End: Original strand, 39421094 - 39421465
Alignment:
| Q |
73 |
ctaacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatc |
172 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||| ||| | | |||||||||||||||||| ||||||||||||||||| | |||||| |
|
|
| T |
39421094 |
ctaacttaccagaaactttatttgcaaaacccagggtctcaaacaactcaactgctatcttgtgctgagcaacaaatgcaaaaagctccaacacttcatc |
39421193 |
T |
|
| Q |
173 |
ttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaa |
272 |
Q |
| |
|
||||| |||| |||||| |||| ||||||||||||||||||||||| || |||| ||| | || ||||||||| ||| || | |||||||||| |
|
|
| T |
39421194 |
ttcattgaaataagtaaccaattggtaaattgacaaaagcagtagaaaaccgagaa---ccaaattattttcagtattttcttccatattagctttcaaa |
39421290 |
T |
|
| Q |
273 |
tcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaa |
372 |
Q |
| |
|
||||| || ||| ||| |||||||||| |||||||| || ||||| ||||||| | |||||||||||||||||||||||||| || | || | || || |
|
|
| T |
39421291 |
tcaagagcgagcttcaatgcttcttcttttacacaagttttaatatgtggtgagattttcatcagttgttctagcagaaagatgtggttctcttcaataa |
39421390 |
T |
|
| Q |
373 |
tcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
|| || |||||||||||||||| || | || |||| || || ||||||||||| |||||| | | |||||||| |
|
|
| T |
39421391 |
tcgcatcattgtctcccttcttatacttttgaataatggggttctgtattatatccaaaacagcatgtgctggat |
39421465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 79 - 284
Target Start/End: Original strand, 39478209 - 39478413
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
||||| ||||||||||||| |||||||||| | ||||| |||||||| | ||||||| |||||||| ||||||||| |||||||| |||| |||| || |
|
|
| T |
39478209 |
taccaaaaactttatttgcgaaacccagggtctcaaacaactccatagctgtcttgtgttgagcaacagatgcaaaaa-ctccaaaacttcaccttcttc |
39478307 |
T |
|
| Q |
179 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||||| ||||| |||||||||||||||||| || |
|
|
| T |
39478308 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaaatcaagaactgccgaagaattttcagtattttctctgatgtaagctttcaaatcatgt |
39478407 |
T |
|
| Q |
279 |
gctagc |
284 |
Q |
| |
|
|||||| |
|
|
| T |
39478408 |
gctagc |
39478413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 79 - 355
Target Start/End: Original strand, 39196424 - 39196700
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
||||||||||| | ||||||||||||||| | ||||| ||||| | || |||| | ||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
39196424 |
taccagaaactctgtttgcaaaacccaggcttccaaacagctccaccgcaatattgttcagagcaacaaatgcaaaaagctccaaaacttcatcttcatc |
39196523 |
T |
|
| Q |
179 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagt |
278 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||| || | |||| |||||||||||||| | |
|
|
| T |
39196524 |
aaaagaatcaagcaatttataaattgacaaaagcagcagaaagccaagaaccgccaaagaattttcagtattgtcattcatgttagctttcaaatcaaat |
39196623 |
T |
|
| Q |
279 |
gctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagat |
355 |
Q |
| |
|
|||||| ||| |||||||| ||| |||||| || ||||| ||||||| ||||||||||||||| |||||| |||| |
|
|
| T |
39196624 |
gctagcttcaatgcttcttttctcacacaaggtttaatatctggtgagattctcatcagttgttccagcagatagat |
39196700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 73 - 447
Target Start/End: Complemental strand, 39604590 - 39604216
Alignment:
| Q |
73 |
ctaacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatc |
172 |
Q |
| |
|
||||| |||||||| |||||| ||||||||||| | | ||||| ||| | || |||||||| ||||||| | || | ||||||| |||| |||||| |
|
|
| T |
39604590 |
ctaacataccagaagctttatcggcaaaacccagagttccaaacagctctacagctatcttgtcctgagcagcaaactcgaaaagctttaaaacttcatc |
39604491 |
T |
|
| Q |
173 |
ttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaa |
272 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||| ||| |||||||| || ||||| ||||| ||| ||| ||||| || ||||||| || ||||||| |
|
|
| T |
39604490 |
ttcatcgaaagaaggagccaatccataaattgacacaaggagtagaaaacccagaactgccaccaaattttcggtattttcacttatgttagatttcaaa |
39604391 |
T |
|
| Q |
273 |
tcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaa |
372 |
Q |
| |
|
| |||||||||| ||| ||||||||||||||||| | || ||||| ||| || |||||||||||||| ||||||| ||| ||||||| || || |
|
|
| T |
39604390 |
ttaagtgctagcttcattgcttcttctcttacacgaggtttaatatgtggtttgattctcatcagttgtttgagcagaagaatgtctctatcatcaataa |
39604291 |
T |
|
| Q |
373 |
tcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
| ||||||||||||||| |||| || | || |||| || || ||||||||||| ||||||||||||| ||||| |
|
|
| T |
39604290 |
ttacagcattgtctcccatcttatacttttgaataatgggattctgtattatatccaaaacaacttttgatggat |
39604216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 167 - 447
Target Start/End: Complemental strand, 44624962 - 44624679
Alignment:
| Q |
167 |
ttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagct |
266 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||||||| ||||||| || ||||||||| |||||| ||| | ||| ||||||||| ||| | |||| |||| |
|
|
| T |
44624962 |
ttcatcttcatcaaaataagtatgcaatccataaatcgacaaaatcaatagaaatccgagaacctccaaataattttcagtattttctttcatgttagct |
44624863 |
T |
|
| Q |
267 |
ttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggct---at |
363 |
Q |
| |
|
||||| ||| | |||||| ||| |||||| |||||||||||| || |||||| ||||||| | ||||||||| |||||||||| |||||||||| || |
|
|
| T |
44624862 |
ttcaactcacgcgctagcttcaatgcttcatctcttacacaaggtttaatatttggtgagattgtcatcagtttttctagcagatagatgcggctttcat |
44624763 |
T |
|
| Q |
364 |
cataaaaaatcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
||| || ||||||||| |||||||| ||||| ||||| |||| || || |||||||||| ||||||| ||||||||||| |
|
|
| T |
44624762 |
catcaataatcacagctttgtctcctttcttaggaagtgggataatggggttcagtattatatccaaaacaatttttgctggat |
44624679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 469 - 633
Target Start/End: Complemental strand, 39223574 - 39223411
Alignment:
| Q |
469 |
gtgactcaactgcaacagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcata |
568 |
Q |
| |
|
||||||||||| || |||||||||| ||||| |||||||||||||| |||| |||| || ||| ||| || |||||| ||||||||||||||||||||| |
|
|
| T |
39223574 |
gtgactcaactccatcagttttctcgcttgtgcccaactgcaaacttattccaccaaaggcatgacttgattgatcatacatgtaagatgcaactgcata |
39223475 |
T |
|
| Q |
569 |
tttagatagcagatatttaagctccctcatatttatagaagcgtcagtaaatgatagtgacaata |
633 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
39223474 |
tttagatagtagatatttaagct-cttcatatttatagaaacatcagtaaatgatagtgacaata |
39223411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 469 - 739
Target Start/End: Complemental strand, 39370977 - 39370706
Alignment:
| Q |
469 |
gtgactcaactgcaacagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcata |
568 |
Q |
| |
|
||||||||| | || |||||||||||||| | | |||||||||||||||||| |||| | || | |||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
39370977 |
gtgactcaagtccatcagttttctcacttatgtgcaactgcaaacttgttccaccaaagttacgacttaattgatcatccatataagacgcaactgcata |
39370878 |
T |
|
| Q |
569 |
tttagatagcagatatttaagctccctcatatttatagaagcgtcagtaaatgatagtgacaataggtattnnnnnnnnca----atactatgcatgaat |
664 |
Q |
| |
|
|||||||| ||||| ||||||| ||||| |||||||||||| | ||||||||||||| |||||| ||| || |||||||||| |||| |
|
|
| T |
39370877 |
tttagataatagataattaagctgcctcacatttatagaagcattggtaaatgatagtg--aataggaattttaaaaaacatcatatactatgcaagaat |
39370780 |
T |
|
| Q |
665 |
gtaagacatctcctagattgaaatatatgggtgacaaaagaaagcattatattaacagttacaatcaatgccaac |
739 |
Q |
| |
|
| ||||||||||| ||| ||||||||||||| | | | ||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
39370779 |
gcaagacatctccaagactgaaatatatgggcg-ctagagaaagcattataataacagttacaatcaatgtcaac |
39370706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 484 - 633
Target Start/End: Original strand, 39387831 - 39387982
Alignment:
| Q |
484 |
cagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagata |
583 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||||||| | |||||| ||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
39387831 |
cagttttctcacttgtgtccaactgcaaacttgttccaccaatggtacgacttaattgatcatccatgtaagattcaactgcatatttagaaagcagata |
39387930 |
T |
|
| Q |
584 |
tt---taagctccctcatatttatagaagcgtcagtaaatgatagtgacaata |
633 |
Q |
| |
|
| ||||||| ||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
39387931 |
ataattaagctct-tcatatttacagaagcatcagtaaatgatagtgacaata |
39387982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 469 - 633
Target Start/End: Original strand, 39196832 - 39196994
Alignment:
| Q |
469 |
gtgactcaactgcaacagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcata |
568 |
Q |
| |
|
||||||||||| || |||||||||||||||| ||||||||||||||| |||| |||| || | ||||| || |||| |||||||||||| |||||||||| |
|
|
| T |
39196832 |
gtgactcaactccatcagttttctcacttgtgtccaactgcaaacttcttccaccaaaggcacggcttgattgatcgtccatgtaagattcaactgcata |
39196931 |
T |
|
| Q |
569 |
tttagatagcagatatttaagctccctcatatttatagaagcgtcagtaaatgatagtgacaata |
633 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||| | |||||| |
|
|
| T |
39196932 |
tttagatagcagatatttaagctctc-catatttatagaagcatca-taaatgataataacaata |
39196994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 132 - 404
Target Start/End: Original strand, 39205709 - 39205981
Alignment:
| Q |
132 |
ttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccg |
231 |
Q |
| |
|
|||||| ||||||| ||||| |||| ||| |||| |||||||| ||| |||||| ||||||| |||||| ||||||||||||||||| |||||||||| |
|
|
| T |
39205709 |
ttgtgcagagcaacaaatgccaaaatctcgaaaacttcatctttatcaaaagaatcaagcaatttataaatcgacaaaagcagtagaaaaccaagaaccg |
39205808 |
T |
|
| Q |
232 |
ccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactct |
331 |
Q |
| |
|
||| ||||| ||||||||| ||| | || | ||||||||| |||| ||||||| ||| ||||| |||||| |||||| ||||||| ||||||| ||| |
|
|
| T |
39205809 |
ccatagaattttcagtattttctttcatcttagctttcaagtcaaatgctagcttcaatgctttttctctcacacaaggttcaataactggtgagattct |
39205908 |
T |
|
| Q |
332 |
catcagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtctcccttcttgcacagtgga |
404 |
Q |
| |
|
|||||||||||| |||||| | || || |||| || ||||||| |||| |||||||| | |||||||||| |
|
|
| T |
39205909 |
catcagttgttcaagcagatatatttggtaatcagcaataatcacaacattatctcccttttggcacagtgga |
39205981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 140 - 348
Target Start/End: Original strand, 39387469 - 39387677
Alignment:
| Q |
140 |
agcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaa |
239 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||| || ||| || ||||| |||||||||||||||||||| ||||| |||||||| |||| |||| |
|
|
| T |
39387469 |
agcaacaaatgcaaaaagctccaaaacttcatcttcgtcaaaataatcaagcagcccataaattgacaaaagcagcagaaaaccaagaacggccaaagaa |
39387568 |
T |
|
| Q |
240 |
tcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagtt |
339 |
Q |
| |
|
| ||||||||| ||| | |||| |||||| |||||| | |||||| ||| |||||||| | |||||||| |||||| || |||||| ||||||||||| |
|
|
| T |
39387569 |
ttttcagtattttctttcatgttagcttttaaatcacgcgctagcttcaatgcttctttttttacacaagtttcaatttttggtgaggttctcatcagtt |
39387668 |
T |
|
| Q |
340 |
gttctagca |
348 |
Q |
| |
|
||||||||| |
|
|
| T |
39387669 |
gttctagca |
39387677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 79 - 297
Target Start/End: Original strand, 39412945 - 39413161
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||||| || | || ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
39412945 |
taccagaaacttt--ttgcaaaacccagggttccaaacagcttcgcagctatcttgtgttgagcaacaaatgcaaaaagctccaagatttcatcttcatc |
39413042 |
T |
|
| Q |
179 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagt |
278 |
Q |
| |
|
||| |||||| ||||||| ||| ||||||||||| ||||| | ||||||||||| ||| | ||| ||||| ||| | | || |||||||||||||||| |
|
|
| T |
39413043 |
caaaaaagtaaccaatccacaaactgacaaaagcaacagaaaactaagaaccgccaaagagttttcggtattttctttcaagttagctttcaaatcaagt |
39413142 |
T |
|
| Q |
279 |
gctagcgtcagtgcttctt |
297 |
Q |
| |
|
|||||| ||| |||||||| |
|
|
| T |
39413143 |
gctagcttcaatgcttctt |
39413161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 74 - 343
Target Start/End: Complemental strand, 39223984 - 39223715
Alignment:
| Q |
74 |
taacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatct |
173 |
Q |
| |
|
|||| ||||||||||| | ||||||||||||||| | ||||| ||||| || || |||||| ||||||| ||||||||||| |||| || ||||||| |
|
|
| T |
39223984 |
taacataccagaaactctgtttgcaaaacccaggcatccaaacagctccacagcaattttgtgcagagcaacaaatgcaaaaagatccagaacttcatct |
39223885 |
T |
|
| Q |
174 |
tcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaat |
273 |
Q |
| |
|
||||| || ||| ||||||| |||||||||||||||||| ||||| ||||||||||||| ||| | ||||||||| ||| | |||| |||| |||| |
|
|
| T |
39223884 |
tcatcaaatgaatcaagcaatttataaattgacaaaagcagcagaaaaccaagaaccgccaaagatttttcagtattgtctttcatgttttcttttaaat |
39223785 |
T |
|
| Q |
274 |
caagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttc |
343 |
Q |
| |
|
|| ||||||| ||| ||||| |||||| ||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
39223784 |
catatgctagcttcaatgctttttctctctcacaaggttcaatatctggtgagattctcatcagttgttc |
39223715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 128 - 447
Target Start/End: Complemental strand, 39099806 - 39099487
Alignment:
| Q |
128 |
tatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaaga |
227 |
Q |
| |
|
|||||||||||||||| | || ||||||||| |||| |||||||||||| ||||||| | |||| ||||||||||| ||| |||||||| |||||| |
|
|
| T |
39099806 |
tatcttgtgctgagcagcaaacccaaaaagctttaaaacttcatcttcatcaaaagaaggagccaatttataaattgacagaaggagtagaaaaccaaga |
39099707 |
T |
|
| Q |
228 |
accgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgaga |
327 |
Q |
| |
|
|||||||| |||| ||||||| | || ||||| ||| |||||| | |||||| ||| ||| |||||||||||||||||| || |||| ||||||| |
|
|
| T |
39099706 |
accgccaccgaattttcagtagtttcacttataaaagatttcaacttaagtgccagcttcatcgcttcttctcttacacaaggtttgatatgtggtgaga |
39099607 |
T |
|
| Q |
328 |
ctctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatc |
427 |
Q |
| |
|
||||||||||||||| ||||||| ||| || |||| || ||| ||||||||||||||| |||| || | || |||| || || ||||||||||| |
|
|
| T |
39099606 |
ttctcatcagttgttcgagcagaagaatgtctctttcatcaataattacagcattgtctcccatcttatacttttgaataatgggattctgtattatatc |
39099507 |
T |
|
| Q |
428 |
taaaacaacttttgctggat |
447 |
Q |
| |
|
||||| ||||||| ||||| |
|
|
| T |
39099506 |
caaaacgacttttgatggat |
39099487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 73 - 350
Target Start/End: Complemental strand, 2362953 - 2362676
Alignment:
| Q |
73 |
ctaacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatc |
172 |
Q |
| |
|
||||| ||||||||||||||| ||| ||||||| | || ||||| ||| | || ||||||||| |||||| | || ||||||||| ||||||||||| |
|
|
| T |
2362953 |
ctaacataccagaaactttatgtgccaaacccatagtcccaaacagctctacagatatcttgtgttgagcagcaaacccaaaaagctttaaaatttcatc |
2362854 |
T |
|
| Q |
173 |
ttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaa |
272 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| ||| || | ||| || ||||| | ||| | || ||||||||| || | ||||||||||||| |
|
|
| T |
2362853 |
ttcatcgaaagaagaaaccaatccataaattgacagaaggagcaaaaaccccagaactggcactggattttcagtattttcgccaatgtaagctttcagt |
2362754 |
T |
|
| Q |
273 |
tcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcaga |
350 |
Q |
| |
|
| |||||||||| ||| ||||||||||| ||| | || || || ||||||| ||||||||||||||| |||||| |
|
|
| T |
2362753 |
ttaagtgctagcttcattgcttcttctcgcacatgaggtttaacatgtggtgagattctcatcagttgttcgagcaga |
2362676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 89 - 305
Target Start/End: Original strand, 39425457 - 39425673
Alignment:
| Q |
89 |
tttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagta |
188 |
Q |
| |
|
||||| ||||||||||| ||||| ||||| ||| | || || |||||||||| ||| | | | ||||||| ||||| ||| ||||| |||||||||| | |
|
|
| T |
39425457 |
tttatctgcaaaacccatggccccaaacagctctacagctaagttgtgctgagaaacaagttcgaaaagcttcaaaacttcttcttcgtcgaaagaagga |
39425556 |
T |
|
| Q |
189 |
agcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtca |
288 |
Q |
| |
|
| || |||||||||||||| ||| |||||||| |||||||| ||| | |||| |||| | || | ||||||| |||||||||||||||||||| | ||| |
|
|
| T |
39425557 |
accagtccataaattgacagaagaagtagaaaaccaagaacagccgctgaattttcattgttttgacttatgttagctttcaaatcaagtgctaacttca |
39425656 |
T |
|
| Q |
289 |
gtgcttcttctcttaca |
305 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
39425657 |
ttgcttcttcttttaca |
39425673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 89 - 447
Target Start/End: Original strand, 39493363 - 39493721
Alignment:
| Q |
89 |
tttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagta |
188 |
Q |
| |
|
||||| ||||||||||| ||||| ||||| ||||| | || |||||||||| ||| | | |||| |||| |||| ||||| ||||||||||| | | |
|
|
| T |
39493363 |
tttatctgcaaaacccatggccccaaacagctccacaacaatgttgtgctgagaaacaagtccaaatagctttaaaacctcatcctcatcgaaagatgga |
39493462 |
T |
|
| Q |
189 |
agcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtca |
288 |
Q |
| |
|
| || |||||||||||||| ||| |||||||| || |||||||| || |||| ||| || || | ||||||| |||||||| ||||||||||||| ||| |
|
|
| T |
39493463 |
accagtccataaattgacagaaggagtagaaaacctagaaccgcaactgaattttctgtgttttgacttatgttagctttcatatcaagtgctagcttca |
39493562 |
T |
|
| Q |
289 |
gtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtctcc |
388 |
Q |
| |
|
|||||||||| ||||| | | ||||| ||||||| | || |||||| ||| ||||||| ||| ||||||||| || ||| |||||| |||||| |
|
|
| T |
39493563 |
ttgcttcttcttttacatgaggtctaatatctggtgagattttcctcagttcttcgagcagaagaatgtggctatcatcaataattgcagcatcgtctcc |
39493662 |
T |
|
| Q |
389 |
cttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
|||| ||| | | |||| || || ||||||||||| ||||||||||||| ||||| |
|
|
| T |
39493663 |
tatcttacactttttaataatggggttctgtattatatccaaaacaacttttgatggat |
39493721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 507 - 597
Target Start/End: Original strand, 44895443 - 44895533
Alignment:
| Q |
507 |
tgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctca |
597 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| |||||||||||| ||||| ||||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
44895443 |
tgcaaacttgttccaccaatggtacggcttaattgatcatccatgttagatgtaactgcatatttagataacaaatatttaagctacctca |
44895533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 635
Target Start/End: Complemental strand, 39138496 - 39138364
Alignment:
| Q |
503 |
caactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcatattt |
602 |
Q |
| |
|
|||||||||||||||||| ||||||| | |||||| |||||||| ||| |||||||||||||||||| ||||||||| | ||||| |||||||||||| |
|
|
| T |
39138496 |
caactgcaaacttgttccatcaatggttggacttaattgatcatccgtgttagatgcaactgcatatttggatagcagagaattaagatccctcatattt |
39138397 |
T |
|
| Q |
603 |
atagaagcgtcagtaaatgatagtgacaatagg |
635 |
Q |
| |
|
||||||| ||| |||||| |||||||||| |
|
|
| T |
39138396 |
ttagaagcaacagcaaatgaagatgacaatagg |
39138364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 503 - 599
Target Start/End: Original strand, 39473102 - 39473198
Alignment:
| Q |
503 |
caactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcata |
599 |
Q |
| |
|
|||||||||||||||| | || |||| | |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39473102 |
caactgcaaacttgtttcatcagtggttggacttaattgatcatccatgtaagatgtagctgcatatttagatagcagatatttaagctccctcata |
39473198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 77 - 447
Target Start/End: Complemental strand, 39144866 - 39144496
Alignment:
| Q |
77 |
cttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttca |
176 |
Q |
| |
|
||||||||| | |||||||||||| |||| ||||| ||||| ||| | || ||| | |||||||| ||| | | ||||||||| |||| ||||||||| |
|
|
| T |
39144866 |
cttaccagatattttatttgcaaatcccaaggccccaaacagctctacagctatgtcgtgctgagaaacaagtccaaaaagctttaaaacatcatcttca |
39144767 |
T |
|
| Q |
177 |
tcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaa |
276 |
Q |
| |
|
| |||||| | | || ||||||||||||| ||| |||||||| || |||| |||| | |||| ||| || || | ||||| | ||||||||||||| |
|
|
| T |
39144766 |
ttgaaagatggacccagcccataaattgacagaaggagtagaaaacctagaatcgccgctgaattttctgtgttttgacttatattggctttcaaatcaa |
39144667 |
T |
|
| Q |
277 |
gtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcac |
376 |
Q |
| |
|
|||||||| ||| |||||||||| ||||| | || ||||| |||||| | || |||||| | ||||||| ||| ||||||||| || ||| || |
|
|
| T |
39144666 |
gtgctagcttcattgcttcttcttttacatgaggtttaatatctagtgagattttcctcagttccttgagcagaagaatgtggctatcatcaataattac |
39144567 |
T |
|
| Q |
377 |
agcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
||||| |||||| |||| ||| | | ||||||| || ||||||||||| ||||||||||||| ||||| |
|
|
| T |
39144566 |
agcatcgtctcctatcttacactttttaataatcgggttctgtattatatccaaaacaacttttgatggat |
39144496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 151 - 441
Target Start/End: Original strand, 39188740 - 39189030
Alignment:
| Q |
151 |
caaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtatt |
250 |
Q |
| |
|
||||||||| |||| |||||||||| |||||||| || ||| ||||||||||| | ||| |||||||| ||||||||| ||| ||||| | || |||| |
|
|
| T |
39188740 |
caaaaagctttaaaacatcatcttcattgaaagaaggaaccaaaccataaattgatagaaggagtagaaaaccaagaaccaccaaagaatttccattatt |
39188839 |
T |
|
| Q |
251 |
ctctcttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcaga |
350 |
Q |
| |
|
||| | |||| |||||| |||||||||||||| ||| ||| || ||||||||| | || ||| | ||||||| |||||||||| | |||||| |
|
|
| T |
39188840 |
ttctttcatgttagcttttaaatcaagtgctagtttcattgcatcctctcttacatgaggtttaatgtcaggtgagattctcatcagtactatgagcaga |
39188939 |
T |
|
| Q |
351 |
aagatgcggctatcataaaaaatcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttg |
441 |
Q |
| |
|
| ||| ||||||||| || ||| ||| ||||||||||| ||| ||| | || |||| || || ||||||||||| ||||||||||||| |
|
|
| T |
39188940 |
agaatgtggctatcatcaataattacaacattgtctcccatctcacacttttgaataatggggttctgtattatatccaaaacaacttttg |
39189030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 633
Target Start/End: Complemental strand, 39163115 - 39162967
Alignment:
| Q |
484 |
cagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagata |
583 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||||||| |||| || | | || || |||||| |||||||||||||||||||||||| || || ||||| |
|
|
| T |
39163115 |
cagttttctcgcttgtgcccaactgcagacttgttccaccaaaggcacgactagattgatcatgcatgtaagatgcaactgcatattttgaaagtagata |
39163016 |
T |
|
| Q |
584 |
tttaagctccctcatatttatagaagcgtcagtaaatgatagtgacaata |
633 |
Q |
| |
|
|||||||| ||| |||||| ||| | |||||||||||||||||||||| |
|
|
| T |
39163015 |
tttaagct-tttcaaatttatggaaacatcagtaaatgatagtgacaata |
39162967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 484 - 633
Target Start/End: Original strand, 39206079 - 39206227
Alignment:
| Q |
484 |
cagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagata |
583 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||||||| |||| || | | || || |||||| |||||||||||||||||||||||| || || ||||| |
|
|
| T |
39206079 |
cagttttctcgcttgtgcccaactgcagacttgttccaccaaaggcacgactagattgatcatgcatgtaagatgcaactgcatattttgaaagtagata |
39206178 |
T |
|
| Q |
584 |
tttaagctccctcatatttatagaagcgtcagtaaatgatagtgacaata |
633 |
Q |
| |
|
|||||||| ||| |||||| ||| | |||||||||||||||||||||| |
|
|
| T |
39206179 |
tttaagct-tttcaaatttatggaaacatcagtaaatgatagtgacaata |
39206227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 167 - 447
Target Start/End: Complemental strand, 44615589 - 44615306
Alignment:
| Q |
167 |
ttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagct |
266 |
Q |
| |
|
|||||||||||| || || ||| |||||| ||||| || |||| || ||||||||||||| || ||| ||||| ||| ||||| ||| | |||| |||| |
|
|
| T |
44615589 |
ttcatcttcatcaaagtaattaaccaatccgtaaatcgataaaatcaatagaaatccaagagcctccaaagaattttcggtattttctttcatgttagct |
44615490 |
T |
|
| Q |
267 |
ttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatctt---caatattcggtgagactctcatcagttgttctagcagaaagatgcggctat |
363 |
Q |
| |
|
||||| ||| |||||| ||| ||||| |||||||||||| || |||||| ||||||| | |||||||||||||||||||| |||| | || | |
|
|
| T |
44615489 |
ttcaactcacacgctagcttcaacgcttcatctcttacacaagatttaataatatttggtgagattatcatcagttgttctagcagatagatccagcctt |
44615390 |
T |
|
| Q |
364 |
cataaaaaatcacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
||| || |||||| || |||||||| ||||| ||||||| | | || || |||||||||| ||||||| ||||||||||| |
|
|
| T |
44615389 |
catcaataatcaccgctttgtctcctttcttaggcagtggaatcgtagggtttagtattatatccaaaacaagttttgctggat |
44615306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 39152909 - 39152813
Alignment:
| Q |
503 |
caactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcata |
599 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||| | | ||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
39152909 |
caactgcaaacttgttccatcaatagtagggctaatttcatcatccatgtaagatgtagctgcatatttagatatcagatatttaagctctctcata |
39152813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 255 - 351
Target Start/End: Complemental strand, 39126578 - 39126482
Alignment:
| Q |
255 |
cttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaa |
351 |
Q |
| |
|
||||||| || |||||| | ||| |||||| ||| ||||||||||||||||| | ||||||||| |||||| ||||||||||||||| ||||||| |
|
|
| T |
39126578 |
cttatgttagatttcaatttaagagctagcttcattgcttcttctcttacacgaggttcaatatttagtgagattctcatcagttgttcgagcagaa |
39126482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 44624626 - 44624577
Alignment:
| Q |
542 |
atcatccatgtaagatgcaactgcatatttagatagcagatatttaagct |
591 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||| ||||||| |
|
|
| T |
44624626 |
atcatccatgtaagatgtatctgcatatttagatagcagatagttaagct |
44624577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 801
Target Start/End: Original strand, 39197727 - 39197768
Alignment:
| Q |
760 |
tttgcaatatacttgacaaattaaaactacattactatacta |
801 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
39197727 |
tttgcaatatacttgaaaaattaaaactacattaatatacta |
39197768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 550 - 633
Target Start/End: Original strand, 39189157 - 39189241
Alignment:
| Q |
550 |
tgtaagatgcaactgcatatttagatagcagatatttaagctccctca-tatttatagaagcgtcagtaaatgatagtgacaata |
633 |
Q |
| |
|
|||| |||| ||||||||| |||| ||||||||||||||||| ||||| ||||||| |||| ||||||||| | ||||||||| |
|
|
| T |
39189157 |
tgtacgatgtaactgcataattagctagcagatatttaagcttcctcagtatttattgaaggttcagtaaatcaaggtgacaata |
39189241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 760 - 806
Target Start/End: Original strand, 39388702 - 39388748
Alignment:
| Q |
760 |
tttgcaatatacttgacaaattaaaactacattactatactactctt |
806 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| ||||||| |||| |
|
|
| T |
39388702 |
tttgcaatatacttgaaaaattaaaattacattaatatactaatctt |
39388748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 760 - 801
Target Start/End: Original strand, 39191017 - 39191058
Alignment:
| Q |
760 |
tttgcaatatacttgacaaattaaaactacattactatacta |
801 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| ||||||| |
|
|
| T |
39191017 |
tttgcaatatacttgaaaaattaaaaatacattaatatacta |
39191058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 760 - 793
Target Start/End: Original strand, 39192046 - 39192079
Alignment:
| Q |
760 |
tttgcaatatacttgacaaattaaaactacatta |
793 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |
|
|
| T |
39192046 |
tttgcaatatacttgaaaaattaaaactacatta |
39192079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 596
Target Start/End: Original strand, 39421539 - 39421632
Alignment:
| Q |
503 |
caactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctc |
596 |
Q |
| |
|
|||||||||||||||||| |||||| | | || ||| ||||||||||||| ||| | |||||||| ||| ||| |||||||||||||||| |
|
|
| T |
39421539 |
caactgcaaacttgttccaacaatggcaggactaaattcatcatccatgtaacatgtatctgcatataaagacagcgcatatttaagctccctc |
39421632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 39503956 - 39504065
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
|||| ||| |||||| ||||||||| || | | ||||| ||| | || ||||| |||||||||| | || ||||||||| |||| |||||||||||| |
|
|
| T |
39503956 |
taccggaagctttatctgcaaaaccaagagttccaaacagctctacagctatctcgtgctgagcagcaaaaccaaaaagcttgaaaacttcatcttcatc |
39504055 |
T |
|
| Q |
179 |
gaaagaagta |
188 |
Q |
| |
|
|||||||||| |
|
|
| T |
39504056 |
gaaagaagta |
39504065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 79 - 447
Target Start/End: Complemental strand, 19809168 - 19808806
Alignment:
| Q |
79 |
taccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatc |
178 |
Q |
| |
|
|||| |||| |||||||||||||||||||| | |||||| |||| | | |||||||||||||||| ||||| ||||||||||| | |||||||||||| |
|
|
| T |
19809168 |
tacctgaaagtttatttgcaaaacccagggtctgaaacagttccacggctgtcttgtgctgagcaacaaatgcgaaaagctccaagacttcatcttcatc |
19809069 |
T |
|
| Q |
179 |
gaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagt |
278 |
Q |
| |
|
||| ||||||||||| |||||| |||||||||||||||||| ||||||||| ||| ||||| ||||||| | | | |||| |||||||||||||||| |
|
|
| T |
19809068 |
aaaataagtaagcaattcataaactgacaaaagcagtagaaaaccaagaaccaccagagaattttcagtact---tttcatgttagctttcaaatcaagt |
19808972 |
T |
|
| Q |
279 |
gctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatcacag |
378 |
Q |
| |
|
|||||| ||| || |||||||||||||| | || ||| |||||||||| |||||||||||||||||||||||||| | |||| ||| ||| |||| |
|
|
| T |
19808971 |
gctagcttcaatgtttcttctcttacaccaggtttaatcttcggtgagattctcatcagttgttctagcagaaagacactgctaccat---caataacag |
19808875 |
T |
|
| Q |
379 |
cattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaacttttgctggat |
447 |
Q |
| |
|
||| |||||||| || || ||||| |||| || || ||||||||||| ||||||||||||| ||||| |
|
|
| T |
19808874 |
catggtctccctcgttacatcgtggaataattgggttttgtattatatccaaaacaacttttgttggat |
19808806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 608
Target Start/End: Complemental strand, 19808345 - 19808240
Alignment:
| Q |
503 |
caactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcatattt |
602 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||||||||| || |||||||||||||||||| ||||||||| ||||| |||||||||||| |
|
|
| T |
19808345 |
caactgcaaacttgttccatcaatggttggacttaatcgatcatccgtgctagatgcaactgcatatttggatagcagaggattaagatccctcatattt |
19808246 |
T |
|
| Q |
603 |
atagaa |
608 |
Q |
| |
|
||||| |
|
|
| T |
19808245 |
ttagaa |
19808240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 118; Significance: 9e-60; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 74 - 435
Target Start/End: Complemental strand, 16114640 - 16114279
Alignment:
| Q |
74 |
taacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatct |
173 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||| | ||||| ||||||| | |||||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
16114640 |
taacgtaccagaagctttatttgcaaaaccgagggtctcaaacagctccataactgtcttgtgctgagcaacagatgcaaaaagctccaaaacttcgcat |
16114541 |
T |
|
| Q |
174 |
tcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaat |
273 |
Q |
| |
|
| ||||||| |||| ||||||||||||| |||||||||||| | ||| |||| ||| ||| |||| || |||||||||||| |||||||||||||||| |
|
|
| T |
16114540 |
ttatcgaaataagttagcaatccataaactgacaaaagcagcataaaaccaacaacagccgatgaatttttagtattctctctcatgtaagctttcaaat |
16114441 |
T |
|
| Q |
274 |
caagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaat |
373 |
Q |
| |
|
| | |||||| ||| ||||| ||||||||||| | || |||| | ||||| | ||||||||||| ||||| |||| ||||| ||| |||| || ||| |
|
|
| T |
16114440 |
cgcgcgctagcttcaatgctttttctcttacacgaggtttaatagttggtgatattctcatcagttcttctaacagatagatgtggcattcatcaataat |
16114341 |
T |
|
| Q |
374 |
cacagcattgtctcccttcttgcacagtggattaatcggtttatgtattatatctaaaacaa |
435 |
Q |
| |
|
||||||||||||||||||||| ||||||||| || || || ||||||||||| ||||||| |
|
|
| T |
16114340 |
cacagcattgtctcccttcttacacagtggagtaccggggttctgtattatatccaaaacaa |
16114279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 469 - 570
Target Start/End: Complemental strand, 16114227 - 16114126
Alignment:
| Q |
469 |
gtgactcaactgcaacagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcata |
568 |
Q |
| |
|
|||||||||| || |||||||||| ||||| | ||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
16114227 |
gtgactcaacgtcatcagttttctcgcttgtgtacaactgcaaacttgttctaccaattgtatgacttaactgatcatccatgtaagatgcaactgcata |
16114128 |
T |
|
| Q |
569 |
tt |
570 |
Q |
| |
|
|| |
|
|
| T |
16114127 |
tt |
16114126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 734
Target Start/End: Complemental strand, 16114077 - 16113993
Alignment:
| Q |
650 |
atactatgcatgaatgtaagacatctcctagattgaaatatatgggtgacaaaagaaagcattatattaacagttacaatcaatg |
734 |
Q |
| |
|
|||||||| | |||||||| || | || |||||||||| ||||| ||||| | ||||| |||||| |||||||||||||||||| |
|
|
| T |
16114077 |
atactatgaaagaatgtaaaacctttctgagattgaaatttatggctgacataggaaagaattatactaacagttacaatcaatg |
16113993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 100; Significance: 5e-49; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 75 - 394
Target Start/End: Complemental strand, 17060918 - 17060599
Alignment:
| Q |
75 |
aacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatctt |
174 |
Q |
| |
|
||||||||||| ||||||||||||||||| || | ||||| ||||| || ||||||||||| |||||| |||||||||| ||||| | |||||||| |
|
|
| T |
17060918 |
aacttaccagacactttatttgcaaaacctagtttctcaaacagctccacagatatcttgtgctcagcaacagatgcaaaaagatccaagacttcatctt |
17060819 |
T |
|
| Q |
175 |
catcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaatc |
274 |
Q |
| |
|
||| ||| |||||| ||||||||||| ||||| | || |||||||| |||||| ||| |||| ||||||||| || |||||| ||||||||| || |
|
|
| T |
17060818 |
gatcaaaataagtaaacaatccataaaccgacaagatcaacagaaatccgagaacctccaatgaatattcagtatttgcttttatgttagctttcaactc |
17060719 |
T |
|
| Q |
275 |
aagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaatc |
374 |
Q |
| |
|
| |||||||| ||| ||||| ||| |||||||| || |||||| ||||| | | |||||||||||||||||| |||||||||||| |||| || |||| |
|
|
| T |
17060718 |
atgtgctagcttcaaagcttcgtcttttacacaagatttaatatttggtgacattatcatcagttgttctagcataaagatgcggctttcatcaataatc |
17060619 |
T |
|
| Q |
375 |
acagcattgtctcccttctt |
394 |
Q |
| |
|
||| | |||||||||||||| |
|
|
| T |
17060618 |
acaactttgtctcccttctt |
17060599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 74 - 404
Target Start/End: Complemental strand, 33562562 - 33562232
Alignment:
| Q |
74 |
taacttaccagaaactttatttgcaaaacccagggcccgaaacatctccatagttatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatct |
173 |
Q |
| |
|
|||| ||||||||||| | ||||||||||||||| ||||| ||||| | || |||||| ||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
33562562 |
taacataccagaaactctgtttgcaaaacccaggctttcaaacagctccacggcaattttgtgcagagcaacaaatgcaaaaagctccaaaacttcatct |
33562463 |
T |
|
| Q |
174 |
tcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagctttcaaat |
273 |
Q |
| |
|
||||| |||||| ||||||| ||||||||||||||||| ||||| ||||||||||||| | || ||||||||| ||| | |||| ||||||||||| |
|
|
| T |
33562462 |
tcatcaaaagaatcaagcaatttataaattgacaaaagcatcagaaaaccaagaaccgccaaaaaaaattcagtattttctttcatgttagctttcaaat |
33562363 |
T |
|
| Q |
274 |
caagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgagactctcatcagttgttctagcagaaagatgcggctatcataaaaaat |
373 |
Q |
| |
|
||| ||||||| ||| |||||||| ||| |||||| |||||||| ||||||| ||||||||||||||| || ||| |||| || |||| || ||| |
|
|
| T |
33562362 |
caaatgctagcttcaatgcttcttttctcacacaaggttcaatatctggtgagattctcatcagttgttccagaagatagatttggtaatcaacaataat |
33562263 |
T |
|
| Q |
374 |
cacagcattgtctcccttcttgcacagtgga |
404 |
Q |
| |
|
||| ||||||||||||| | ||||||||| |
|
|
| T |
33562262 |
gacaacattgtctcccttttgacacagtgga |
33562232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 469 - 630
Target Start/End: Complemental strand, 33562149 - 33561989
Alignment:
| Q |
469 |
gtgactcaactgcaacagttttctcacttgtatccaactgcaaacttgttcccccaatggtatggcttaatcgatcatccatgtaagatgcaactgcata |
568 |
Q |
| |
|
||||||||||| || |||||||||||||||| ||||||||||||||||| | |||| || | | ||| || || ||||||||||||||||||||||||| |
|
|
| T |
33562149 |
gtgactcaactccatcagttttctcacttgtgtccaactgcaaacttgtactaccaaaggcacgacttgattgaccatccatgtaagatgcaactgcata |
33562050 |
T |
|
| Q |
569 |
tttagatagcagatatttaagctccctcatatttatagaagcgtcagtaaatgatagtgaca |
630 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||||||||| | ||||||||||||||||||| |
|
|
| T |
33562049 |
tttagatagtagatatttaagct-cttcatatttatagaaacatcagtaaatgatagtgaca |
33561989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 542 - 592
Target Start/End: Complemental strand, 17060475 - 17060425
Alignment:
| Q |
542 |
atcatccatgtaagatgcaactgcatatttagatagcagatatttaagctc |
592 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||| ||||| |||||||| |
|
|
| T |
17060475 |
atcatccatgtaagatgtatctgcatatttagataaaagatacttaagctc |
17060425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 73; Significance: 6e-33; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 128 - 356
Target Start/End: Complemental strand, 45343184 - 45342956
Alignment:
| Q |
128 |
tatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaaga |
227 |
Q |
| |
|
||||||||||||| |||| || ||||||||||||| | |||||||| ||| ||||||||||||||| ||| ||||||||||| ||||||||| |||||| |
|
|
| T |
45343184 |
tatcttgtgctgaacaacagatacaaaaagctccaagacttcatctttatcaaaagaagtaagcaatacatgaattgacaaaatcagtagaaaaccaaga |
45343085 |
T |
|
| Q |
228 |
accgccacagaatcttcagtattctctcttatgtaagctttcaaatcaagtgctagcgtcagtgcttcttctcttacacaatcttcaatattcggtgaga |
327 |
Q |
| |
|
|| || || | ||||||||| || | | || ||||||||| |||||||||||| | | ||||||||||||||||||| || |||| | || ||| |
|
|
| T |
45343084 |
acgttcaatgatttttcagtatttcctttcacgttagctttcaactcaagtgctagcttgaatgcttcttctcttacacaaggtttaatacttggcaaga |
45342985 |
T |
|
| Q |
328 |
ctctcatcagttgttctagcagaaagatg |
356 |
Q |
| |
|
|||||||||||||||||| ||| ||||| |
|
|
| T |
45342984 |
ttctcatcagttgttctaggagatagatg |
45342956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 167 - 309
Target Start/End: Complemental strand, 44730295 - 44730153
Alignment:
| Q |
167 |
ttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccgccacagaatcttcagtattctctcttatgtaagct |
266 |
Q |
| |
|
||||||| |||| || |||||||||||| |||||| | ||||| || ||||||||| |||||| || ||||| ||||||||| ||| |||||| |||| |
|
|
| T |
44730295 |
ttcatctccatcaaagtaagtaagcaatctataaatcgtcaaaatcaatagaaatccgagaacctcctaagaattttcagtattttcttttatgttagct |
44730196 |
T |
|
| Q |
267 |
ttcaaatcaagtgctagcgtcagtgcttcttctcttacacaat |
309 |
Q |
| |
|
||||| ||| |||||||| ||| ||||| ||||||||||||| |
|
|
| T |
44730195 |
ttcaactcatgtgctagcttcaaagcttcatctcttacacaat |
44730153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 603
Target Start/End: Complemental strand, 45342813 - 45342744
Alignment:
| Q |
534 |
cttaatcgatcatccatgtaagatgcaactgcatatttagatagcagatatttaagctccctcatattta |
603 |
Q |
| |
|
|||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
45342813 |
cttaattgatcatccatgtaagatgtgactaagtatttagatagcagatatttaagctctctcatattta |
45342744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 44950036 - 44950095
Alignment:
| Q |
335 |
cagttgttctagcagaaagatgcggctatcataaaaaatcacagcattgtctcccttctt |
394 |
Q |
| |
|
|||||||||||| ||| ||| |||||| |||| || ||||||||| |||||||||||||| |
|
|
| T |
44950036 |
cagttgttctagaagatagacgcggctttcatcaataatcacagctttgtctcccttctt |
44950095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 51576200 - 51576059
Alignment:
| Q |
132 |
ttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaagaaccg |
231 |
Q |
| |
|
|||||||||||||| ||| ||||| || |||||||||||||| ||| ||| ||| || ||||||||||||||||| ||| || ||| | ||||||||| |
|
|
| T |
51576200 |
ttgtgctgagcaacaaatccaaaatacttcaaaatttcatctttatcaaaataaggaaccaatccataaattgacagaaggagcagataaccaagaacca |
51576101 |
T |
|
| Q |
232 |
ccacagaatcttcagtattctctcttatgtaagctttcaaat |
273 |
Q |
| |
|
|||| |||| ||||||||| || || ||||| |||||||||| |
|
|
| T |
51576100 |
ccacggaattttcagtattttcactaatgtacgctttcaaat |
51576059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 247
Target Start/End: Complemental strand, 33152331 - 33152212
Alignment:
| Q |
128 |
tatcttgtgctgagcaaccaatgcaaaaagctccaaaatttcatcttcatcgaaagaagtaagcaatccataaattgacaaaagcagtagaaatccaaga |
227 |
Q |
| |
|
||||||||| |||||||| | | ||||||||| |||| |||||||||||| ||||| | || ||| ||||||||||||| ||| || ||||| || ||| |
|
|
| T |
33152331 |
tatcttgtgttgagcaacgattccaaaaagctttaaaacttcatcttcatcaaaagatgaaaccaacccataaattgacagaagtagcagaaaacccaga |
33152232 |
T |
|
| Q |
228 |
accgccacagaatcttcagt |
247 |
Q |
| |
|
||| ||||||| |||||| |
|
|
| T |
33152231 |
acctggacagaattttcagt |
33152212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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