View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2810_low_27 (Length: 406)
Name: NF2810_low_27
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 1 - 394
Target Start/End: Complemental strand, 41640461 - 41640068
Alignment:
| Q |
1 |
attttattttcgagttagtagtcattttgacccttaaatgtgtgagaagctgtcaccatagtctgaatttatcaaaattgtaaaaacatacttaaacacg |
100 |
Q |
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| T |
41640461 |
attttattttcgagttagtagtcattttgacccttaaatgtgtgagaagctgtcgccatagtctgaatttatcaaaattgtaaaaacatactcaaacacg |
41640362 |
T |
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| Q |
101 |
tcttgtgttatcgaatgtgttttcgctagtaagtttgatcttcaaatgtgagtttcatgaatcaatttggccaaaaaattattagcaaaaacatacttga |
200 |
Q |
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| T |
41640361 |
tcttgtgttatcgaacgtgttttcgctagtaagtttgatcttcaaatgtgagtttcatgaatcaatttggccaaaaaattattagcaaaaacatacttga |
41640262 |
T |
|
| Q |
201 |
aaatgttattgtaattttgatataatcagagatacattagtgacagactgacaatgcctcacacaattaagaaacaaatgaatatttgctcaattttttc |
300 |
Q |
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| T |
41640261 |
aaatgttattgtaattttcatataatcagagatacattagtgacagactgacaatgcctcacacaattaagaaacaaatgaatatttgctcaattttttc |
41640162 |
T |
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| Q |
301 |
ttttcaattttatgtggacataatcatccatttacaattcaaagtttttatggttgcctttgatttggttaagttgaatgaaaattcttgccta |
394 |
Q |
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| T |
41640161 |
ttttcaattttatgtggacataatcatccatttacaattcaaagtttttatggttgcctttgatttggttaagttgaatgaaacttcttgccta |
41640068 |
T |
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