View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2810_low_58 (Length: 267)
Name: NF2810_low_58
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_low_58 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 10 - 267
Target Start/End: Complemental strand, 33969355 - 33969098
Alignment:
| Q |
10 |
catcatcaacaggaattgaagatacaggacaaggtgaagcttcttcactaataacactgttctcttctgaaataaccacataaggagattcgaaatccaa |
109 |
Q |
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| T |
33969355 |
catcatcaacaggaattgaagatacgggacaaggtgaagcttcttcactaataacactgttctcttctgaaataaccacataaggagattccaaatccaa |
33969256 |
T |
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| Q |
110 |
catcaacttcttatttccaaaacttcccttccttctatgccccatttcatttccattttcaccgtcaaccttaaaacttttaggcaaagacctcctcgcc |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
33969255 |
catcaacttcttatttccaaaacttcccttccttctatgccccatttcatttccattttcaccatcaaccttaaaacttttaggcaaagacctcctcgcc |
33969156 |
T |
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| Q |
210 |
ggcggcaaccggcctctcgacgttggccttgctggcaatgccggcggtaggtctttag |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33969155 |
ggcggcaaccggcctctcgacgttggccttgctggcaatgccggcggtaggtctttag |
33969098 |
T |
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