View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2810_low_62 (Length: 250)
Name: NF2810_low_62
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2810_low_62 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 43120170 - 43120405
Alignment:
| Q |
13 |
aatatctcgtaataataagcactttctttaagcttaacctcaaagttgggatataaagacaataaatttctactttgtgaaattaaaacgcgaaactctc |
112 |
Q |
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| T |
43120170 |
aatatctcgtaataataagcactttctttaagcttaacctcaaagttgggatataaagacaataaatttctactttgtgaaattaaaacgcgaaactct- |
43120268 |
T |
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| Q |
113 |
tgatatgaatttcctcaactttgtgaggcactctcaaaaatcacggtgtgaggtcccatttgactagccgtttgatagacttgaacattgcaacagcctc |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43120269 |
-gatatgaatttcctcaactttgtgaggcactctcaaaaatcacggtgtgaggtcccatttgactagccgtttgatagacttgaacattgcaacagcctc |
43120367 |
T |
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| Q |
213 |
cccttcaataaaagaataaattctaacatgttccaact |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
43120368 |
cccttcaataaaagaataaattctaacatgttccaact |
43120405 |
T |
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