View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2810_low_73 (Length: 242)

Name: NF2810_low_73
Description: NF2810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2810_low_73
NF2810_low_73
[»] chr5 (35 HSPs)
chr5 (162-227)||(30084989-30085054)
chr5 (28-67)||(2545096-2545135)
chr5 (28-67)||(18811282-18811321)
chr5 (28-67)||(27433672-27433711)
chr5 (28-67)||(28551499-28551538)
chr5 (30-67)||(28593419-28593456)
chr5 (30-67)||(29209593-29209630)
chr5 (28-64)||(20992848-20992884)
chr5 (28-67)||(12014641-12014680)
chr5 (32-67)||(28519557-28519592)
chr5 (33-67)||(18811224-18811258)
chr5 (33-67)||(27433617-27433651)
chr5 (33-67)||(28277386-28277420)
chr5 (33-67)||(28551565-28551599)
chr5 (33-67)||(35936694-35936728)
chr5 (79-163)||(24801985-24802069)
chr5 (28-67)||(1497471-1497511)
chr5 (28-67)||(5661739-5661778)
chr5 (28-67)||(10331809-10331847)
chr5 (79-161)||(10598319-10598402)
chr5 (28-67)||(16431480-16431518)
chr5 (36-67)||(24801872-24801903)
chr5 (28-67)||(29986314-29986352)
chr5 (28-67)||(31601846-31601885)
chr5 (83-158)||(40657882-40657956)
chr5 (37-67)||(4633856-4633886)
chr5 (37-67)||(10331754-10331784)
chr5 (33-67)||(12014585-12014619)
chr5 (103-169)||(35936530-35936596)
chr5 (28-58)||(35936643-35936673)
chr5 (79-160)||(4633761-4633841)
chr5 (123-160)||(20025020-20025057)
chr5 (28-56)||(12496690-12496718)
chr5 (36-64)||(13924221-13924249)
chr5 (114-162)||(33052816-33052864)
[»] chr3 (73 HSPs)
chr3 (162-227)||(25045461-25045526)
chr3 (162-227)||(32278447-32278512)
chr3 (28-163)||(39846373-39846511)
chr3 (28-163)||(44512277-44512414)
chr3 (28-67)||(18945899-18945938)
chr3 (28-67)||(35359565-35359604)
chr3 (28-67)||(41747361-41747400)
chr3 (29-67)||(49166922-49166960)
chr3 (79-163)||(17261023-17261108)
chr3 (166-223)||(40024829-40024886)
chr3 (28-67)||(19301277-19301316)
chr3 (28-67)||(23388822-23388861)
chr3 (28-67)||(45333919-45333958)
chr3 (28-67)||(48489130-48489169)
chr3 (28-67)||(54087650-54087689)
chr3 (33-67)||(1351392-1351426)
chr3 (33-67)||(9559162-9559196)
chr3 (33-67)||(15096625-15096659)
chr3 (33-67)||(16295895-16295929)
chr3 (103-161)||(19756862-19756920)
chr3 (33-67)||(30595629-30595663)
chr3 (33-67)||(30908682-30908716)
chr3 (100-162)||(33898268-33898330)
chr3 (33-67)||(41301204-41301238)
chr3 (103-161)||(41749386-41749444)
chr3 (33-67)||(46993971-46994005)
chr3 (28-64)||(16876243-16876279)
chr3 (100-160)||(43110703-43110763)
chr3 (103-163)||(53806796-53806855)
chr3 (36-67)||(9797094-9797125)
chr3 (103-162)||(11761081-11761140)
chr3 (28-67)||(16295951-16295989)
chr3 (36-67)||(16308207-16308238)
chr3 (28-67)||(17342939-17342978)
chr3 (28-67)||(20123780-20123818)
chr3 (28-63)||(21549902-21549937)
chr3 (28-67)||(24286307-24286345)
chr3 (36-67)||(29013563-29013594)
chr3 (28-67)||(29853547-29853586)
chr3 (28-67)||(33887198-33887236)
chr3 (36-67)||(35433997-35434028)
chr3 (36-67)||(44512443-44512474)
chr3 (100-162)||(15093710-15093772)
chr3 (83-137)||(15309295-15309348)
chr3 (33-67)||(18945954-18945988)
chr3 (33-67)||(19301339-19301373)
chr3 (33-63)||(23526833-23526863)
chr3 (33-67)||(24286251-24286285)
chr3 (33-67)||(26480106-26480140)
chr3 (28-58)||(30908737-30908767)
chr3 (110-160)||(31293775-31293825)
chr3 (28-58)||(41301151-41301181)
chr3 (112-162)||(45151624-45151674)
chr3 (28-58)||(51102261-51102291)
chr3 (28-58)||(51688118-51688148)
chr3 (37-67)||(51688174-51688204)
chr3 (114-163)||(4548544-4548593)
chr3 (121-158)||(17543981-17544018)
chr3 (115-163)||(26927508-26927557)
chr3 (104-161)||(31073690-31073747)
chr3 (114-163)||(35434082-35434131)
chr3 (28-61)||(46550902-46550935)
chr3 (114-163)||(54012598-54012647)
chr3 (115-163)||(9559033-9559081)
chr3 (28-56)||(9796756-9796784)
chr3 (103-163)||(25024537-25024597)
chr3 (165-225)||(27011272-27011332)
chr3 (114-162)||(30451541-30451589)
chr3 (29-65)||(33898172-33898208)
chr3 (103-163)||(36867856-36867916)
chr3 (103-163)||(41301277-41301337)
chr3 (114-162)||(48418653-48418701)
chr3 (111-163)||(49263027-49263079)
[»] scaffold0127 (1 HSPs)
scaffold0127 (167-227)||(30118-30178)
[»] chr1 (60 HSPs)
chr1 (167-227)||(41404157-41404217)
chr1 (28-67)||(12277373-12277412)
chr1 (28-67)||(18653888-18653927)
chr1 (28-67)||(36454431-36454470)
chr1 (28-67)||(46583924-46583963)
chr1 (33-162)||(16555457-16555587)
chr1 (166-223)||(39793670-39793727)
chr1 (165-225)||(42365973-42366033)
chr1 (28-63)||(24004242-24004277)
chr1 (28-67)||(43412979-43413018)
chr1 (33-67)||(12277316-12277350)
chr1 (82-163)||(17724243-17724325)
chr1 (33-67)||(18653950-18653984)
chr1 (33-67)||(50721850-50721884)
chr1 (35-67)||(4352287-4352319)
chr1 (28-67)||(16555392-16555432)
chr1 (81-163)||(4605428-4605511)
chr1 (33-64)||(10176539-10176570)
chr1 (28-67)||(13295904-13295943)
chr1 (169-224)||(15581658-15581713)
chr1 (28-67)||(15879888-15879927)
chr1 (28-63)||(24466030-24466065)
chr1 (28-67)||(26399384-26399422)
chr1 (36-67)||(26486668-26486699)
chr1 (115-162)||(35168019-35168066)
chr1 (28-67)||(50721791-50721829)
chr1 (79-163)||(12277427-12277513)
chr1 (37-67)||(13738518-13738548)
chr1 (33-67)||(15879829-15879863)
chr1 (33-67)||(15961665-15961699)
chr1 (121-163)||(24004767-24004809)
chr1 (37-67)||(24465974-24466004)
chr1 (28-58)||(31923734-31923764)
chr1 (33-67)||(34945748-34945782)
chr1 (33-63)||(37847675-37847705)
chr1 (33-63)||(43412926-43412956)
chr1 (30-67)||(4352220-4352257)
chr1 (38-67)||(6607338-6607367)
chr1 (79-162)||(17746457-17746536)
chr1 (114-163)||(24963013-24963062)
chr1 (110-163)||(26399523-26399576)
chr1 (121-158)||(26486537-26486574)
chr1 (28-57)||(26486612-26486641)
chr1 (114-163)||(26486779-26486828)
chr1 (103-160)||(31648585-31648642)
chr1 (165-202)||(50678130-50678167)
chr1 (28-64)||(50879973-50880010)
chr1 (38-67)||(51809856-51809885)
chr1 (121-161)||(4352378-4352418)
chr1 (30-58)||(11452257-11452285)
chr1 (35-67)||(13738578-13738610)
chr1 (114-162)||(16555324-16555372)
chr1 (103-163)||(24004083-24004143)
chr1 (28-64)||(24004674-24004709)
chr1 (115-163)||(26399185-26399233)
chr1 (121-161)||(27142821-27142861)
chr1 (115-163)||(38742392-38742440)
chr1 (122-158)||(43193185-43193221)
chr1 (79-161)||(50879822-50879905)
chr1 (120-164)||(52413118-52413162)
[»] chr7 (60 HSPs)
chr7 (28-163)||(44412453-44412591)
chr7 (167-227)||(19625506-19625566)
chr7 (28-67)||(1263882-1263921)
chr7 (28-67)||(2248495-2248534)
chr7 (28-67)||(22335437-22335476)
chr7 (28-67)||(24374365-24374404)
chr7 (28-67)||(43745983-43746022)
chr7 (28-67)||(48848062-48848101)
chr7 (167-223)||(261729-261785)
chr7 (32-67)||(10659884-10659919)
chr7 (28-63)||(24205069-24205104)
chr7 (122-161)||(46146380-46146419)
chr7 (33-67)||(1492831-1492865)
chr7 (166-224)||(12633519-12633577)
chr7 (33-67)||(12670793-12670827)
chr7 (33-67)||(19336142-19336176)
chr7 (33-67)||(24205127-24205161)
chr7 (33-67)||(24374426-24374460)
chr7 (33-67)||(44412395-44412429)
chr7 (33-67)||(45639589-45639623)
chr7 (114-163)||(24233620-24233669)
chr7 (28-67)||(1492888-1492928)
chr7 (28-64)||(10659833-10659869)
chr7 (165-225)||(23417194-23417254)
chr7 (35-67)||(36878374-36878406)
chr7 (108-162)||(1492759-1492814)
chr7 (91-162)||(1830811-1830882)
chr7 (33-64)||(2456476-2456507)
chr7 (33-64)||(5077389-5077420)
chr7 (28-67)||(5835827-5835865)
chr7 (28-67)||(8603665-8603703)
chr7 (33-64)||(11352459-11352490)
chr7 (28-67)||(12670732-12670770)
chr7 (28-67)||(15108246-15108284)
chr7 (33-64)||(19336206-19336237)
chr7 (28-67)||(24757461-24757500)
chr7 (28-67)||(36878431-36878469)
chr7 (36-67)||(43746040-43746071)
chr7 (37-67)||(2248561-2248591)
chr7 (114-163)||(3402130-3402180)
chr7 (82-164)||(19336040-19336122)
chr7 (33-67)||(21852895-21852929)
chr7 (33-67)||(22335379-22335413)
chr7 (33-67)||(30335275-30335309)
chr7 (103-161)||(36374147-36374204)
chr7 (121-163)||(42695026-42695068)
chr7 (33-67)||(45633625-45633659)
chr7 (28-58)||(45639644-45639674)
chr7 (91-168)||(1831967-1832043)
chr7 (107-168)||(33757403-33757464)
chr7 (162-211)||(35759838-35759887)
chr7 (108-161)||(48848144-48848197)
chr7 (82-168)||(12670627-12670715)
chr7 (103-166)||(13593441-13593505)
chr7 (81-160)||(13797587-13797667)
chr7 (103-159)||(15108090-15108146)
chr7 (115-163)||(20164434-20164482)
chr7 (83-162)||(21852764-21852843)
chr7 (79-162)||(21852944-21853028)
chr7 (79-162)||(44569052-44569136)
[»] chr4 (82 HSPs)
chr4 (82-163)||(24215719-24215800)
chr4 (28-165)||(28292208-28292344)
chr4 (167-227)||(35033797-35033857)
chr4 (28-67)||(4431447-4431486)
chr4 (28-67)||(8590744-8590783)
chr4 (28-67)||(35904771-35904810)
chr4 (28-67)||(42861478-42861517)
chr4 (82-168)||(15522690-15522778)
chr4 (28-162)||(3475485-3475623)
chr4 (28-64)||(31110404-31110440)
chr4 (28-64)||(52431256-52431292)
chr4 (28-67)||(5498958-5498997)
chr4 (28-67)||(12144642-12144681)
chr4 (33-163)||(30966610-30966742)
chr4 (28-67)||(30966768-30966807)
chr4 (28-67)||(31592609-31592648)
chr4 (28-67)||(42802425-42802464)
chr4 (28-67)||(46731046-46731085)
chr4 (33-67)||(5420174-5420208)
chr4 (33-67)||(9885049-9885083)
chr4 (33-67)||(15782400-15782434)
chr4 (33-67)||(23981216-23981250)
chr4 (33-67)||(27449961-27449995)
chr4 (33-67)||(34318505-34318539)
chr4 (28-62)||(35804017-35804051)
chr4 (33-67)||(35904714-35904748)
chr4 (33-67)||(54097195-54097229)
chr4 (29-67)||(55432525-55432563)
chr4 (166-215)||(50859268-50859317)
chr4 (79-162)||(6439184-6439268)
chr4 (79-161)||(7272266-7272347)
chr4 (81-162)||(30966824-30966907)
chr4 (79-162)||(35904826-35904910)
chr4 (100-168)||(51353429-51353497)
chr4 (114-161)||(4431292-4431339)
chr4 (28-67)||(4928978-4929016)
chr4 (36-67)||(12144708-12144739)
chr4 (28-63)||(15522799-15522834)
chr4 (103-162)||(15782261-15782320)
chr4 (36-67)||(15782359-15782390)
chr4 (28-67)||(20514808-20514846)
chr4 (28-63)||(22452094-22452129)
chr4 (28-67)||(27450017-27450055)
chr4 (28-67)||(34853271-34853310)
chr4 (28-67)||(46360819-46360857)
chr4 (114-161)||(46731136-46731183)
chr4 (122-161)||(50719927-50719966)
chr4 (103-161)||(1952959-1953017)
chr4 (33-67)||(3475648-3475682)
chr4 (33-67)||(4928920-4928954)
chr4 (33-67)||(5496467-5496501)
chr4 (28-58)||(7085937-7085967)
chr4 (33-67)||(7085989-7086023)
chr4 (33-67)||(12878773-12878807)
chr4 (33-63)||(13032989-13033019)
chr4 (33-67)||(13910774-13910808)
chr4 (33-67)||(15522857-15522891)
chr4 (33-67)||(22452035-22452069)
chr4 (79-149)||(31110458-31110528)
chr4 (33-63)||(33295079-33295109)
chr4 (33-67)||(35803960-35803994)
chr4 (33-67)||(36405777-36405811)
chr4 (28-58)||(40997611-40997641)
chr4 (37-67)||(40997670-40997700)
chr4 (33-67)||(44311128-44311162)
chr4 (28-64)||(1952877-1952914)
chr4 (28-57)||(6463713-6463742)
chr4 (110-155)||(14946280-14946325)
chr4 (79-144)||(24661221-24661286)
chr4 (114-163)||(35370398-35370447)
chr4 (166-223)||(46944139-46944196)
chr4 (79-158)||(9885157-9885237)
chr4 (79-162)||(13032886-13032970)
chr4 (28-67)||(13033044-13033084)
chr4 (103-162)||(13910850-13910910)
chr4 (114-162)||(16588980-16589028)
chr4 (131-171)||(20986070-20986110)
chr4 (95-163)||(26144156-26144224)
chr4 (115-163)||(36405864-36405912)
chr4 (127-163)||(36680206-36680242)
chr4 (167-227)||(41809872-41809932)
chr4 (115-163)||(54097098-54097146)
[»] chr2 (67 HSPs)
chr2 (167-223)||(28199194-28199250)
chr2 (28-67)||(7785178-7785217)
chr2 (82-162)||(22116154-22116233)
chr2 (33-162)||(36944159-36944288)
chr2 (28-67)||(23834387-23834426)
chr2 (28-67)||(30728844-30728883)
chr2 (28-67)||(35337056-35337095)
chr2 (79-164)||(758719-758805)
chr2 (29-63)||(7327868-7327902)
chr2 (33-67)||(18543931-18543965)
chr2 (33-67)||(23834138-23834172)
chr2 (33-67)||(31108446-31108480)
chr2 (33-67)||(32845525-32845559)
chr2 (81-162)||(32845638-32845720)
chr2 (33-67)||(33441602-33441636)
chr2 (33-67)||(35336997-35337031)
chr2 (33-67)||(43015067-43015101)
chr2 (33-67)||(44611087-44611121)
chr2 (112-161)||(2526352-2526401)
chr2 (28-163)||(32195904-32196039)
chr2 (103-163)||(18048815-18048874)
chr2 (122-162)||(31122293-31122333)
chr2 (82-162)||(38358266-38358345)
chr2 (29-64)||(493825-493860)
chr2 (28-67)||(8467304-8467342)
chr2 (28-67)||(14793405-14793444)
chr2 (83-162)||(24952036-24952113)
chr2 (28-67)||(28739506-28739545)
chr2 (28-67)||(31108502-31108541)
chr2 (28-67)||(32650005-32650043)
chr2 (103-162)||(39341265-39341324)
chr2 (28-67)||(40385394-40385432)
chr2 (28-67)||(43015123-43015161)
chr2 (28-67)||(43766401-43766439)
chr2 (28-67)||(44611025-44611064)
chr2 (33-64)||(45632645-45632676)
chr2 (33-67)||(493882-493916)
chr2 (33-67)||(5558319-5558353)
chr2 (33-67)||(7327922-7327956)
chr2 (33-67)||(8467365-8467399)
chr2 (100-162)||(11093976-11094038)
chr2 (28-58)||(11115365-11115395)
chr2 (37-67)||(13691842-13691872)
chr2 (82-161)||(17920204-17920285)
chr2 (33-67)||(26756536-26756570)
chr2 (33-67)||(32196062-32196096)
chr2 (33-67)||(32649947-32649981)
chr2 (120-162)||(33441504-33441546)
chr2 (115-157)||(36795474-36795516)
chr2 (115-161)||(44610927-44610973)
chr2 (113-162)||(29097076-29097125)
chr2 (34-67)||(29640858-29640891)
chr2 (28-57)||(33441659-33441688)
chr2 (38-67)||(34181665-34181694)
chr2 (103-160)||(42162439-42162496)
chr2 (122-162)||(874352-874392)
chr2 (115-159)||(5856280-5856324)
chr2 (114-162)||(10374138-10374186)
chr2 (79-162)||(11115259-11115342)
chr2 (79-163)||(11740692-11740779)
chr2 (114-162)||(14793465-14793513)
chr2 (79-162)||(24951903-24951986)
chr2 (103-162)||(26502591-26502651)
chr2 (82-161)||(29640763-29640842)
chr2 (37-65)||(34181733-34181761)
chr2 (79-161)||(40321613-40321694)
chr2 (114-162)||(43766491-43766539)
[»] scaffold0318 (2 HSPs)
scaffold0318 (28-67)||(12548-12587)
scaffold0318 (36-67)||(12491-12522)
[»] chr8 (51 HSPs)
chr8 (28-67)||(5160447-5160486)
chr8 (28-67)||(11424211-11424250)
chr8 (28-67)||(23565991-23566030)
chr8 (28-67)||(37611429-37611468)
chr8 (28-67)||(45530600-45530639)
chr8 (28-144)||(15152068-15152185)
chr8 (28-67)||(9857409-9857448)
chr8 (32-67)||(11105870-11105905)
chr8 (28-67)||(16358509-16358548)
chr8 (28-67)||(19158086-19158125)
chr8 (28-63)||(21692553-21692588)
chr8 (28-63)||(26711448-26711483)
chr8 (28-67)||(43382850-43382889)
chr8 (118-168)||(4923506-4923556)
chr8 (33-67)||(5160391-5160425)
chr8 (33-67)||(16358450-16358484)
chr8 (33-67)||(19158028-19158062)
chr8 (33-67)||(39301981-39302015)
chr8 (34-67)||(41708899-41708932)
chr8 (35-67)||(23428893-23428925)
chr8 (103-163)||(25653702-25653762)
chr8 (79-162)||(45530501-45530585)
chr8 (28-63)||(94226-94261)
chr8 (96-162)||(11272849-11272916)
chr8 (36-67)||(11424265-11424296)
chr8 (28-67)||(18367181-18367219)
chr8 (100-163)||(21692602-21692664)
chr8 (28-67)||(29724006-29724044)
chr8 (28-67)||(39302041-39302079)
chr8 (28-58)||(4352416-4352446)
chr8 (33-67)||(18367125-18367159)
chr8 (115-161)||(19158178-19158224)
chr8 (28-58)||(22686851-22686881)
chr8 (37-67)||(31343530-31343560)
chr8 (33-67)||(37611373-37611407)
chr8 (29-67)||(38661538-38661575)
chr8 (121-163)||(38687348-38687390)
chr8 (33-63)||(45530664-45530694)
chr8 (29-58)||(11961025-11961054)
chr8 (122-167)||(13572534-13572579)
chr8 (122-163)||(18028277-18028318)
chr8 (79-163)||(19157928-19158013)
chr8 (100-161)||(26537971-26538032)
chr8 (114-163)||(43383000-43383049)
chr8 (31-67)||(3448794-3448830)
chr8 (131-163)||(12719085-12719117)
chr8 (28-67)||(13759387-13759427)
chr8 (122-162)||(30222105-30222145)
chr8 (103-167)||(31343601-31343665)
chr8 (115-163)||(41708826-41708874)
chr8 (82-137)||(45530715-45530771)
[»] chr6 (47 HSPs)
chr6 (28-67)||(308478-308517)
chr6 (33-162)||(21604119-21604249)
chr6 (28-67)||(33936346-33936385)
chr6 (28-67)||(10790198-10790237)
chr6 (28-67)||(21604272-21604311)
chr6 (28-67)||(27967569-27967608)
chr6 (28-67)||(29239573-29239612)
chr6 (33-67)||(11336753-11336787)
chr6 (33-67)||(21226882-21226916)
chr6 (33-67)||(24602568-24602602)
chr6 (82-163)||(18788872-18788952)
chr6 (114-163)||(22362947-22362996)
chr6 (110-163)||(31826213-31826266)
chr6 (35-67)||(10366535-10366567)
chr6 (28-64)||(19412537-19412573)
chr6 (115-163)||(26475761-26475809)
chr6 (35-67)||(29239624-29239656)
chr6 (79-162)||(33552744-33552828)
chr6 (28-67)||(2181468-2181506)
chr6 (28-67)||(7313600-7313638)
chr6 (28-67)||(10366470-10366509)
chr6 (28-67)||(11336812-11336850)
chr6 (28-67)||(14974635-14974674)
chr6 (33-161)||(18172475-18172604)
chr6 (28-63)||(21226827-21226862)
chr6 (103-162)||(24602429-24602488)
chr6 (36-67)||(24602527-24602558)
chr6 (28-67)||(31826328-31826366)
chr6 (120-163)||(33225440-33225483)
chr6 (33-64)||(33352540-33352571)
chr6 (33-67)||(308422-308456)
chr6 (114-168)||(2033108-2033162)
chr6 (103-161)||(10790333-10790390)
chr6 (115-157)||(12292869-12292911)
chr6 (121-163)||(13420440-13420482)
chr6 (33-67)||(14487738-14487772)
chr6 (33-67)||(18788760-18788794)
chr6 (103-169)||(19376058-19376122)
chr6 (121-163)||(19376207-19376249)
chr6 (28-57)||(18788815-18788844)
chr6 (103-152)||(19412399-19412448)
chr6 (114-163)||(25562152-25562201)
chr6 (114-163)||(26101666-26101715)
chr6 (115-163)||(10545829-10545877)
chr6 (28-56)||(19418105-19418133)
chr6 (79-163)||(31733259-31733346)
chr6 (35-63)||(33225515-33225543)
[»] scaffold0511 (3 HSPs)
scaffold0511 (82-163)||(5405-5485)
scaffold0511 (33-67)||(5293-5327)
scaffold0511 (28-57)||(5348-5377)
[»] scaffold0192 (2 HSPs)
scaffold0192 (103-163)||(14446-14506)
scaffold0192 (28-67)||(14365-14403)
[»] scaffold0034 (1 HSPs)
scaffold0034 (28-67)||(83526-83565)
[»] scaffold0009 (3 HSPs)
scaffold0009 (28-67)||(150084-150123)
scaffold0009 (36-67)||(150152-150183)
scaffold0009 (110-158)||(263206-263254)
[»] scaffold1797 (1 HSPs)
scaffold1797 (33-67)||(631-665)
[»] scaffold0111 (2 HSPs)
scaffold0111 (33-67)||(29559-29593)
scaffold0111 (29-58)||(29608-29637)
[»] scaffold0010 (1 HSPs)
scaffold0010 (33-67)||(145427-145461)
[»] scaffold0001 (3 HSPs)
scaffold0001 (33-67)||(53385-53419)
scaffold0001 (28-67)||(53441-53481)
scaffold0001 (79-162)||(53496-53580)
[»] scaffold0007 (2 HSPs)
scaffold0007 (28-61)||(68758-68791)
scaffold0007 (33-66)||(68817-68850)
[»] scaffold0597 (2 HSPs)
scaffold0597 (28-67)||(6397-6436)
scaffold0597 (33-67)||(6341-6375)
[»] scaffold0148 (1 HSPs)
scaffold0148 (28-67)||(34848-34886)
[»] scaffold0085 (1 HSPs)
scaffold0085 (28-67)||(25183-25221)
[»] scaffold0375 (1 HSPs)
scaffold0375 (37-67)||(14062-14092)
[»] scaffold0019 (1 HSPs)
scaffold0019 (33-67)||(142409-142443)
[»] scaffold0002 (2 HSPs)
scaffold0002 (100-161)||(432710-432772)
scaffold0002 (122-171)||(332055-332104)
[»] scaffold0025 (1 HSPs)
scaffold0025 (28-57)||(2860-2889)
[»] scaffold0013 (1 HSPs)
scaffold0013 (38-67)||(149585-149614)
[»] scaffold0430 (1 HSPs)
scaffold0430 (96-164)||(12793-12861)
[»] scaffold0258 (1 HSPs)
scaffold0258 (103-163)||(18641-18700)
[»] scaffold0227 (1 HSPs)
scaffold0227 (102-161)||(24935-24995)


Alignment Details
Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 30085054 - 30084989
Alignment:
Q  162 ttgaattattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    |||| |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  30085054 ttgagttattaatgtgttccattccattggatacaccccaatttgggaggaatggaaaattggatg 30084989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 2545135 - 2545096
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2545135 taaagtcgtttttttatgacctattaggggggtattccaa 2545096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 18811282 - 18811321
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18811282 taaagtcgtttttttatgacctattaggggggtattccaa 18811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 27433672 - 27433711
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27433672 taaagtcgtttttttatgacctattaggggggtattccaa 27433711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 28551538 - 28551499
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28551538 taaagtcgtttttttatgacctattaggggggtattccaa 28551499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 28593456 - 28593419
Alignment:
Q  30 aagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28593456 aagtcgtttttttatgacctattaggggggtattccaa 28593419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 29209630 - 29209593
Alignment:
Q  30 aagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29209630 aagtcgtttttttatgacctattaggggggtattccaa 29209593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 20992848 - 20992884
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattc 64  Q
    |||||||||||||||||||||||||||||||||||||    
T  20992848 taaagtcgtttttttatgacctattaggggggtattc 20992884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 12014641 - 12014680
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  12014641 taaagtcatttttttatgacctattaggggggtattccaa 12014680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 28519592 - 28519557
Alignment:
Q  32 gtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||    
T  28519592 gtcgtttttttatgacctattaggggggtattccaa 28519557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 18811258 - 18811224
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  18811258 tcgtttttttatgacctattaggggggtattccaa 18811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 27433651 - 27433617
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  27433651 tcgtttttttatgacctattaggggggtattccaa 27433617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 28277386 - 28277420
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  28277386 tcgtttttttatgacctattaggggggtattccaa 28277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 28551565 - 28551599
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  28551565 tcgtttttttatgacctattaggggggtattccaa 28551599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 35936694 - 35936728
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  35936694 tcgtttttttatgacctattaggggggtattccaa 35936728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 24801985 - 24802069
Alignment:
Q  79 acagggggtaaataaataaataaa-tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||||||||| ||| ||| |||| ||||| |||||  |||||| |||||||||| | |||||||| ||||||||||||||    
T  24801985 acagggggtaaataaaaaaaaaaaatttacaggggggaaaacaaaaaatgacctatattaca-ggggtaaaacactattaaccctt 24802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 1497471 - 1497511
Alignment:
Q  28 taaagtcgtttttttatgacctatta-ggggggtattccaa 67  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  1497471 taaagtcgtttttttatgacctattagggggggtattccaa 1497511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 5661778 - 5661739
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  5661778 taaagtcgtttttttatgacctattaggaaggtattccaa 5661739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 10331809 - 10331847
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10331809 taaagtcgtttttttatgacctatta-gggggtattccaa 10331847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 10598402 - 10598319
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||||||||||||| ||| | |||| | ||||| |||||  |||||| |||||||||| | |||||||||||| ||||||||    
T  10598402 acagggggtaaataaaaaaaaatattttacaggggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccc 10598319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 16431480 - 16431518
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  16431480 taaagtcgtttttttatgacctatta-gggggtattccaa 16431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 24801903 - 24801872
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  24801903 tttttttatgacctattaggggggtattccaa 24801872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 29986314 - 29986352
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  29986314 taaagtcgtttttttatgacctatta-gggggtattccaa 29986352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 31601885 - 31601846
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  31601885 taaagtcgtttttttatgacctattaaggggttattccaa 31601846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 40657882 - 40657956
Alignment:
Q  83 ggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaa 158  Q
    |||||||||||||||| ||||||| |||||| |||  | ||||| |||||||||| | |||||||||| |||||||    
T  40657882 ggggtaaataaataaaaaaatttaaagggga-aaatccgaaaatgacctatattacagggggtaaagccctattaa 40657956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 4633886 - 4633856
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  4633886 ttttttatgacctattaggggggtattccaa 4633856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 10331784 - 10331754
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  10331784 ttttttatgacctattaggggggtattccaa 10331754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 12014619 - 12014585
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||| |||||||||    
T  12014619 tcgtttttttatgacctattaggggtgtattccaa 12014585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 35936596 - 35936530
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttgaatta 169  Q
    |||| ||| |||||||  ||||||||| ||||||| | |||||||||||| |||||||||| |||||    
T  35936596 tttacaggagagaaaacaaaaaataacatatattacagggggtaaagcaccattaacccttaaatta 35936530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 35936673 - 35936643
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  35936673 taaagtcgtttttttatgacctattaggggg 35936643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 4633841 - 4633761
Alignment:
Q  79 acagggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacc 160  Q
    ||||||||||||| || |||  | |||| ||||| |||||| |||||| |||||||||| | |||||||||||| |||||||    
T  4633841 acagggggtaaatcaaaaaaatattttacagggg-gaaaataaaaaatgacctatattacatggggtaaagcaccattaacc 4633761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 20025020 - 20025057
Alignment:
Q  123 aaataacctatattataaggggtaaagcactattaacc 160  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  20025020 aaatgacctatattatagggggtaaagcactattaacc 20025057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 12496690 - 12496718
Alignment:
Q  28 taaagtcgtttttttatgacctattaggg 56  Q
    |||||||||||||||||||||||||||||    
T  12496690 taaagtcgtttttttatgacctattaggg 12496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 64
Target Start/End: Complemental strand, 13924249 - 13924221
Alignment:
Q  36 tttttttatgacctattaggggggtattc 64  Q
    |||||||||||||||||||||||||||||    
T  13924249 tttttttatgacctattaggggggtattc 13924221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 33052864 - 33052816
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||| |||||| |||||||||| |||||||||||  |||||||||||    
T  33052864 gaaaataaaaaatgacctatattacaaggggtaaagacctattaaccct 33052816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 25045526 - 25045461
Alignment:
Q  162 ttgaattattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    |||| |||||||||||||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  25045526 ttgagttattaatgtgttccattccattggatacacaccaatttgggaggaatggaaaattggatg 25045461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 32278512 - 32278447
Alignment:
Q  162 ttgaattattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    |||| |||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||    
T  32278512 ttgagttattaatgtgttcaattccattggatacaccccaatttgggaggaatggaaaattggatg 32278447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 39846511 - 39846373
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaannnnnnnnnnn-acagggggtaaat-aaataaataaatttataggggagaaaatcaaaaa 125  Q
    |||||| |||||||||||||||||||| ||||||||||||            ||||||||||||| ||| ||| ||||||| ||||||||||| ||||||    
T  39846511 taaagttgtttttttatgacctattagtggggtattccaattttttttttttacagggggtaaatcaaaaaaaaaaatttacaggggagaaaaccaaaaa 39846412  T
Q  126 taacctatattataa-ggggtaaagcactattaaccctt 163  Q
    | |||||||||| || |||||||||||| ||||||||||    
T  39846411 tgacctatattacaagggggtaaagcaccattaaccctt 39846373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 44512414 - 44512277
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaannnnnnnnnnnaca-gggggtaaat-aaataaataaatttataggggagaaaatcaaaaa 125  Q
    ||||||||||||||||||||||||||||||||||||||||           ||| |||||||||| ||| |||  | |||| ||||| |||||  |||||    
T  44512414 taaagtcgtttttttatgacctattaggggggtattccaaaaaaattaattacaggggggtaaatcaaaaaaaatattttacaggggggaaaacaaaaaa 44512315  T
Q  126 taacctatattataaggggtaaagcactattaaccctt 163  Q
    | || ||||||||| |||||||||||| ||||||||||    
T  44512314 tgacatatattatagggggtaaagcaccattaaccctt 44512277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 18945938 - 18945899
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18945938 taaagtcgtttttttatgacctattaggggggtattccaa 18945899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 35359565 - 35359604
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35359565 taaagtcgtttttttatgacctattaggggggtattccaa 35359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 41747361 - 41747400
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41747361 taaagtcgtttttttatgacctattaggggggtattccaa 41747400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 49166922 - 49166960
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49166922 aaagtcgtttttttatgacctattaggggggtattccaa 49166960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 17261108 - 17261023
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||||||||| ||||| |||| | ||| | ||||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  17261108 acagggggtaaataaaaaaatatattttacaggagggaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 17261023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 40024829 - 40024886
Alignment:
Q  166 attattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattg 223  Q
    ||||||||||||||||||| ||||||||| ||||||| || ||||||||| |||||||    
T  40024829 attattaatgtgttccattccattggatacaccccaaattgggaggaatgaaaaattg 40024886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 19301316 - 19301277
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19301316 taaagtcgtttttttatgacctattagggggctattccaa 19301277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 23388861 - 23388822
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  23388861 taaagtcgttttttgatgacctattaggggggtattccaa 23388822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 45333958 - 45333919
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  45333958 taaagtcgtttttttatgacctattatgggggtattccaa 45333919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 48489130 - 48489169
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  48489130 taaagtcgtttttttatgatctattaggggggtattccaa 48489169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 54087650 - 54087689
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  54087650 taaagtcatttttttatgacctattaggggggtattccaa 54087689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 1351392 - 1351426
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  1351392 tcgtttttttatgacctattaggggggtattccaa 1351426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 9559162 - 9559196
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  9559162 tcgtttttttatgacctattaggggggtattccaa 9559196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 15096659 - 15096625
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  15096659 tcgtttttttatgacctattaggggggtattccaa 15096625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 16295929 - 16295895
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  16295929 tcgtttttttatgacctattaggggggtattccaa 16295895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 19756920 - 19756862
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||| ||||| ||||| ||||||| |||||||||||| |||||||||||| ||||||||    
T  19756920 tttacaggggggaaaaccaaaaatgacctatattatagggggtaaagcaccattaaccc 19756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 30595629 - 30595663
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  30595629 tcgtttttttatgacctattaggggggtattccaa 30595663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 30908716 - 30908682
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  30908716 tcgtttttttatgacctattaggggggtattccaa 30908682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 33898268 - 33898330
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||| | ||| ||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  33898268 aaatttacaagggggaaaaccaaaaataacctatattacagggggtaaagcaccattaaccct 33898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 41301204 - 41301238
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  41301204 tcgtttttttatgacctattaggggggtattccaa 41301238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 41749444 - 41749386
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||| ||||||||||||||||| | |||||||||| |||||||||||  ||||||||||    
T  41749444 tttacaggggagaaaatcaaaagtgacctatattacaaggggtaaaggcctattaaccc 41749386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 46994005 - 46993971
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  46994005 tcgtttttttatgacctattaggggggtattccaa 46993971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 16876279 - 16876243
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattc 64  Q
    |||||| ||||||||||||||||||||||||||||||    
T  16876279 taaagttgtttttttatgacctattaggggggtattc 16876243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 43110703 - 43110763
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacc 160  Q
    ||||||| ||||| ||||||||||||| |||||||||| | ||| |||| |||||||||||    
T  43110703 aaatttagaggggtgaaaatcaaaaatgacctatattacaggggataaaacactattaacc 43110763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 53806796 - 53806855
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||| ||||||| ||||| |||||||||| |||||||||||  ||||||||||||    
T  53806796 tttatagggg-gaaaatcgaaaatgacctatattacaaggggtaaagacctattaaccctt 53806855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 9797094 - 9797125
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  9797094 tttttttatgacctattaggggggtattccaa 9797125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 11761140 - 11761081
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||  ||||| ||||||| |||||||||| | |||||||||||| |||||||||    
T  11761140 tttatagggaggaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 11761081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 16295951 - 16295989
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  16295951 taaagtcgtttttttatgacctatta-gggggtattccaa 16295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 16308238 - 16308207
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  16308238 tttttttatgacctattaggggggtattccaa 16308207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 17342978 - 17342939
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  17342978 taaagtcgtttttttatgacctattataggggtattccaa 17342939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 20123780 - 20123818
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20123780 taaagtcgtttttttatgacctatta-gggggtattccaa 20123818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 21549902 - 21549937
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21549902 taaagtcgtttttttatgacctattagggggatatt 21549937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 24286307 - 24286345
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  24286307 taaagtcgtttttttatgacctatta-gggggtattccaa 24286345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 29013563 - 29013594
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  29013563 tttttttatgacctattaggggggtattccaa 29013594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 29853547 - 29853586
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  29853547 taaagtcgtttttctatgacctattaggggtgtattccaa 29853586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 33887198 - 33887236
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  33887198 taaagtcgtttttttatgacctatta-gggggtattccaa 33887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 35433997 - 35434028
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  35433997 tttttttatgacctattaggggggtattccaa 35434028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 44512443 - 44512474
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  44512443 tttttttatgacctattaggggggtattccaa 44512474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 15093710 - 15093772
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||| |||||  |||||||||| || ||||||||||| |||||||||  |||||||||||    
T  15093710 aaatttacagggggcaaaatcaaaagtaccctatattatagggggtaaagttctattaaccct 15093772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 15309295 - 15309348
Alignment:
Q  83 ggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatatta 137  Q
    |||||||||||| ||| ||||||||||||| ||||| || |||||||||||||||    
T  15309295 ggggtaaataaaaaaa-aaatttataggggggaaaaccataaataacctatatta 15309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 18945954 - 18945988
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| ||||||||    
T  18945954 tcgtttttttatgacctattagggggatattccaa 18945988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 19301339 - 19301373
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||| ||||||    
T  19301339 tcgtttttttatgacctattaggggggtgttccaa 19301373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 23526863 - 23526833
Alignment:
Q  33 tcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||||    
T  23526863 tcgtttttttatgacctattaggggggtatt 23526833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 24286285 - 24286251
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||| |||||||||    
T  24286285 tcgtttttttatgacctattaggggagtattccaa 24286251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 26480140 - 26480106
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||| |||||||||||    
T  26480140 tcgtttttttatgacctattaggagggtattccaa 26480106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 30908737 - 30908767
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  30908737 taaagtcgtttttttatgacctattaggggg 30908767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 31293775 - 31293825
Alignment:
Q  110 gggagaaaatcaaaaataacctatattataaggggtaaagcactattaacc 160  Q
    ||||||||||| ||| |  ||||||||||| ||||||||||||||||||||    
T  31293775 gggagaaaatcgaaagtgtcctatattatagggggtaaagcactattaacc 31293825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 41301181 - 41301151
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  41301181 taaagtcgtttttttatgacctattaggggg 41301151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 45151674 - 45151624
Alignment:
Q  112 gagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||| ||||||| |||||||||| | ||||||||||||| ||||||||    
T  45151674 gagaaaaccaaaaatgacctatattacagggggtaaagcactgttaaccct 45151624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 51102261 - 51102291
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  51102261 taaagtcgtttttttatgacctattaggggg 51102291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 51688148 - 51688118
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  51688148 taaagtcgtttttttatgacctattaggggg 51688118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 51688174 - 51688204
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  51688174 ttttttatgacctattaggggggtattccaa 51688204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 4548593 - 4548544
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  4548593 gaaaaccaaaaatgacctatattagagggggtaaagcaccattaaccctt 4548544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 17543981 - 17544018
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaa 158  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  17543981 aaaaataacctatattacaaggggtaaagcaccattaa 17544018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 26927557 - 26927508
Alignment:
Q  115 aaaatcaaaaataacctatattata-aggggtaaagcactattaaccctt 163  Q
    |||| |||||||||||||||||||| ||||||||||  ||||||||||||    
T  26927557 aaaaccaaaaataacctatattatagaggggtaaagacctattaaccctt 26927508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 31073747 - 31073690
Alignment:
Q  104 ttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||||||  |||||| ||||| |||||||||| | |||||||| ||||||||||||    
T  31073747 ttatagggggaaaaatcgaaaatgacctatattacatggggtaaaacactattaaccc 31073690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 35434082 - 35434131
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  35434082 gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 35434131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 46550935 - 46550902
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggta 61  Q
    |||||||||||||||||||||||| |||||||||    
T  46550935 taaagtcgtttttttatgacctataaggggggta 46550902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 54012598 - 54012647
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  54012598 gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 54012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 9559081 - 9559033
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| |||||||||| ||||||| | |||||||||||| ||||||||||    
T  9559081 aaaaccaaaaataacatatattacagggggtaaagcaccattaaccctt 9559033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 9796784 - 9796756
Alignment:
Q  28 taaagtcgtttttttatgacctattaggg 56  Q
    |||||||||||||||||||||||||||||    
T  9796784 taaagtcgtttttttatgacctattaggg 9796756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 25024597 - 25024537
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||  ||||| | ||||| || ||||||| | |||||||||||||||||||||||    
T  25024597 tttatagggtggaaaaccgaaaatgacatatattacagggggtaaagcactattaaccctt 25024537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 27011332 - 27011272
Alignment:
Q  165 aattattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattgga 225  Q
    ||||||||||||||| |||| ||||||||| ||||||| || |  |||||| |||||||||    
T  27011332 aattattaatgtgtttcattccattggatacaccccaaattggatggaatgaaaaattgga 27011272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 30451541 - 30451589
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||| ||||| |||||||||| | |||||||||||| |||||||||    
T  30451541 gaaaatcgaaaatgacctatattacagggggtaaagcacaattaaccct 30451589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 33898208 - 33898172
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggggtattcc 65  Q
    |||||||||||||||||||||||||||| || |||||    
T  33898208 aaagtcgtttttttatgacctattagggaggcattcc 33898172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 36867856 - 36867916
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||||||||| |  |||| |||||||||||| |||||||||  ||||||||||||    
T  36867856 tttacaggggagaaaaccggaaatgacctatattatagggggtaaagatctattaaccctt 36867916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 41301277 - 41301337
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||| |||||| |||||| || ||||||| | |||||||||||| ||||||||||    
T  41301277 tttacaggggggaaaataaaaaatgacatatattacagggggtaaagcaccattaaccctt 41301337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 48418701 - 48418653
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||| |||||| |||||||||| | |||||||||||| |||||||||    
T  48418701 gaaaataaaaaatgacctatattacagggggtaaagcaccattaaccct 48418653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 49263079 - 49263027
Alignment:
Q  111 ggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||||||| | | |||||||||| |||||||||  ||||||||||||    
T  49263079 ggagaaaatcaaaagtgatctatattatagggggtaaagacctattaaccctt 49263027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 30118 - 30178
Alignment:
Q  167 ttattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    |||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||    
T  30118 ttattaatgtgttccatttcattggatacaccccaaattggggggaatggaaaattggatg 30178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 41404217 - 41404157
Alignment:
Q  167 ttattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    |||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||    
T  41404217 ttattaatgtgttccatttcattggatacaccccaaattggggggaatggaaaattggatg 41404157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 12277373 - 12277412
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12277373 taaagtcgtttttttatgacctattaggggggtattccaa 12277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 18653927 - 18653888
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18653927 taaagtcgtttttttatgacctattaggggggtattccaa 18653888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 36454431 - 36454470
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36454431 taaagtcgtttttttatgacctattaggggggtattccaa 36454470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 46583963 - 46583924
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46583963 taaagtcgtttttttatgacctattaggggggtattccaa 46583924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 16555457 - 16555587
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaannnnnnnnnnnacagggggtaaat-aaataaataaatttataggggagaaaatcaaaaataacct 131  Q
    |||||||||||||||||||||||||||||||||||           ||||||||||||| ||| |||  | |||| ||||| |||||  |||||| ||||    
T  16555457 tcgtttttttatgacctattaggggggtattccaaattttttttttacagggggtaaatcaaaaaaaatattttacaggggggaaaacaaaaaatgacct 16555556  T
Q  132 atattataaggggtaaagcactattaaccct 162  Q
    |||||| | || ||||||||| |||||||||    
T  16555557 atattacagggagtaaagcaccattaaccct 16555587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 39793727 - 39793670
Alignment:
Q  166 attattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattg 223  Q
    ||||||||||||||||||||||||||||| |||| || |||| ||||||| |||||||    
T  39793727 attattaatgtgttccatttcattggatacaccctaaattagaaggaatgaaaaattg 39793670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 42366033 - 42365973
Alignment:
Q  165 aattattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattgga 225  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||  |||||| |||||||||    
T  42366033 aattattaatgtgttccattccattggatacaccccaaattagatggaatgaaaaattgga 42365973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 24004242 - 24004277
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  24004242 taaagtcgtttttttatgacctattaggggggtatt 24004277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 43412979 - 43413018
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  43412979 taaagtcgtttttttatgacctattaggagggtattccaa 43413018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 12277350 - 12277316
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  12277350 tcgtttttttatgacctattaggggggtattccaa 12277316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 17724243 - 17724325
Alignment:
Q  82 gggggtaaat-aaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||| ||| ||| ||||||| |||||||||||  |||||| |||||||||| | |||||||| ||| ||||||||||    
T  17724243 gggggtaaatcaaaaaaaaaaatttacaggggagaaaacaaaaaatgacctatattacagggggtaaaacaccattaaccctt 17724325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 18653950 - 18653984
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  18653950 tcgtttttttatgacctattaggggggtattccaa 18653984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 50721850 - 50721884
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  50721850 tcgtttttttatgacctattaggggggtattccaa 50721884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 4352287 - 4352319
Alignment:
Q  35 gtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||    
T  4352287 gtttttttatgacctattaggggggtattccaa 4352319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 16555432 - 16555392
Alignment:
Q  28 taaagtcgtttttttatgacctattagggggg-tattccaa 67  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  16555432 taaagtcgtttttttatgacctattaggggggatattccaa 16555392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 4605428 - 4605511
Alignment:
Q  81 agggggtaaataaataaataa-atttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||||||  ||| || ||||| |||||| |||| | ||||| |||||||||| || ||||||||||||||| ||||||    
T  4605428 agggggtaaataataaaaaaatatttacaggggaaaaaaccgaaaatgacctatattacaaagggtaaagcactattgaccctt 4605511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 10176570 - 10176539
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||||||||||    
T  10176570 tcgtttttttatgacctattaggggggtattc 10176539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 13295943 - 13295904
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  13295943 taaagtcatttttttatgacctattagggggatattccaa 13295904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 15581713 - 15581658
Alignment:
Q  169 attaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattgg 224  Q
    |||| ||||||||||| ||||||||| ||||||| || || |||||||||||||||    
T  15581713 attattgtgttccattccattggatacaccccaaattggggggaatggaaaattgg 15581658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 15879888 - 15879927
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  15879888 taaagtcgtttttttataacctattaagggggtattccaa 15879927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 24466030 - 24466065
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    ||||||||||||||||||||| ||||||||||||||    
T  24466030 taaagtcgtttttttatgaccaattaggggggtatt 24466065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 26399422 - 26399384
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  26399422 taaagtcgtttttttatgacctattag-ggggtattccaa 26399384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 26486668 - 26486699
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  26486668 tttttttatgacctattaggggggtattccaa 26486699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 35168019 - 35168066
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||| ||||||| |||||||||| | ||||||||||||||||||||||    
T  35168019 aaaaccaaaaatgacctatattacagggggtaaagcactattaaccct 35168066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 50721829 - 50721791
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  50721829 taaagtcgtttttttatgacctattag-ggggtattccaa 50721791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 12277427 - 12277513
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattata-aggggtaaagcactattaaccctt 163  Q
    ||||||||||||| || ||| | |||| | ||||||||||| ||||||| |||||||||| |  |||||||||||| ||||||||||    
T  12277427 acagggggtaaatcaaaaaaaatattttacaggggagaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccctt 12277513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 13738548 - 13738518
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  13738548 ttttttatgacctattaggggggtattccaa 13738518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 15879863 - 15879829
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||| ||||||||||||||||||||    
T  15879863 tcgtttttttatgagctattaggggggtattccaa 15879829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 15961665 - 15961699
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||| ||||||||||    
T  15961665 tcgtttttttatgacctattagggaggtattccaa 15961699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 24004767 - 24004809
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| |||||||||| |||||||||||||| ||||||||||    
T  24004767 aaaaatgacctatattacaaggggtaaagcaccattaaccctt 24004809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 24466004 - 24465974
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  24466004 ttttttatgacctattaggggggtattccaa 24465974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 31923764 - 31923734
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  31923764 taaagtcgtttttttatgacctattaggggg 31923734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 34945782 - 34945748
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||| ||||||||||    
T  34945782 tcgtttttttatgacctattagggaggtattccaa 34945748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 37847705 - 37847675
Alignment:
Q  33 tcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||||    
T  37847705 tcgtttttttatgacctattaggggggtatt 37847675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 43412956 - 43412926
Alignment:
Q  33 tcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||||    
T  43412956 tcgtttttttatgacctattaggggggtatt 43412926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 4352257 - 4352220
Alignment:
Q  30 aagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  4352257 aagtcgtttttttatgacttattagggtggtattccaa 4352220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 6607338 - 6607367
Alignment:
Q  38 tttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||    
T  6607338 tttttatgacctattaggggggtattccaa 6607367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 17746457 - 17746536
Alignment:
Q  79 acagggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||||||| ||  ||| ||||||  ||| | ||||| |||||||||||| |||||||| ||| |||||||||    
T  17746457 acagggggtaaataaataaaaaa--ttacagggga--aaaccgaaaatgacctatattatagggggtaaaacaccattaaccct 17746536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 24963013 - 24963062
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||||||||||||||||| | ||||||||   ||||||||||||    
T  24963013 gaaaatcaaaaataacctatattacagggggtaaaagcctattaaccctt 24963062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 26399523 - 26399576
Alignment:
Q  110 gggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||  ||||||||||||||||| | | |||||||||| ||||||||||    
T  26399523 gggagaaaacaaaaaataacctatattacaggaggtaaagcaccattaaccctt 26399576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 26486574 - 26486537
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaa 158  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  26486574 aaaaatgacctatattacaaggggtaaagcactattaa 26486537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 26486641 - 26486612
Alignment:
Q  28 taaagtcgtttttttatgacctattagggg 57  Q
    ||||||||||||||||||||||||||||||    
T  26486641 taaagtcgtttttttatgacctattagggg 26486612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 26486779 - 26486828
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| |||||| |||||||||| | |||||||||||| ||||||||||    
T  26486779 gaaaataaaaaatgacctatattacagggggtaaagcaccattaaccctt 26486828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 31648585 - 31648642
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacc 160  Q
    |||| |||||| |||| |||||||||||||||||| | |||||||||  |||||||||    
T  31648585 tttacaggggacaaaaccaaaaataacctatattacagggggtaaaggtctattaacc 31648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 50678130 - 50678167
Alignment:
Q  165 aattattaatgtgttccatttcattggatataccccaa 202  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  50678130 aattattaatgtgttccattccattggatacaccccaa 50678167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 50879973 - 50880010
Alignment:
Q  28 taaagtcgtttt-tttatgacctattaggggggtattc 64  Q
    |||||||||||| |||||||||||||||||||||||||    
T  50879973 taaagtcgttttttttatgacctattaggggggtattc 50880010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 51809885 - 51809856
Alignment:
Q  38 tttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||    
T  51809885 tttttatgacctattaggggggtattccaa 51809856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 4352378 - 4352418
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||| ||||||||||||| ||||||||||| ||||||||    
T  4352378 aaaaattacctatattataaagggtaaagcaccattaaccc 4352418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 58
Target Start/End: Original strand, 11452257 - 11452285
Alignment:
Q  30 aagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||    
T  11452257 aagtcgtttttttatgacctattaggggg 11452285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 13738578 - 13738610
Alignment:
Q  35 gtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||| ||||||||||||    
T  13738578 gtttttttatgacctattagtggggtattccaa 13738610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 16555372 - 16555324
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||| |||||| |||||||||| | |||||||||||| |||||||||    
T  16555372 gaaaataaaaaatgacctatattacagggggtaaagcaccattaaccct 16555324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 24004143 - 24004083
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||| | |||||| |||||| || ||||||| | |||||||||||| ||||||||||    
T  24004143 tttataggagggaaaataaaaaatgacatatattacagggggtaaagcaccattaaccctt 24004083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 24004674 - 24004709
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattc 64  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24004674 taaagtcgtttt-ttatgacctattaggggggtattc 24004709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 26399185 - 26399233
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| ||||| |||||||||| | |||||||| ||||||||||||||    
T  26399185 aaaatcgaaaatgacctatattacagggggtaaaacactattaaccctt 26399233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 27142821 - 27142861
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    ||||||||||||||||| | |||||||||||| ||||||||    
T  27142821 aaaaataacctatattacagggggtaaagcaccattaaccc 27142861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 38742392 - 38742440
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||| || ||||||||| | |||||||||| ||||||||||||    
T  38742392 aaaatcaaaagtaccctatattacagggggtaaagctctattaaccctt 38742440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 43193185 - 43193221
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaa 158  Q
    |||||||||||||||| || |||||||||||||||||    
T  43193185 aaaataacctatattacaacgggtaaagcactattaa 43193221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 50879905 - 50879822
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattata-aggggtaaagcactattaaccc 161  Q
    ||||||||||||| || ||||| |||| | |||||| ||||| |||||| |||||||||| | ||||||||||||| ||||||||    
T  50879905 acagggggtaaatcaaaaaatatattttacagggga-aaaataaaaaatgacctatattacagaggggtaaagcaccattaaccc 50879822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 52413162 - 52413118
Alignment:
Q  120 caaaaataacctatattataaggggtaaagcactattaacccttg 164  Q
    ||||||| |||||||||| | |||||||||||| |||||||||||    
T  52413162 caaaaatgacctatattacagggggtaaagcaccattaacccttg 52413118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 44412453 - 44412591
Alignment:
Q  28 taaagtcgtttttttatgacctattagggggg-tattccaannnnnnnnnnn--acagggggtaaataaataaataaatttataggggagaaaatcaaaa 124  Q
    |||||||||||||||||||||||||||||||| ||||||||             |||||||||||||||| ||| ||| ||| ||||| |||||  ||||    
T  44412453 taaagtcgtttttttatgacctattagggggggtattccaaaaaacactattttacagggggtaaataaaaaaaaaaaattaaaggggggaaaacaaaaa 44412552  T
Q  125 ataacctatattataaggggtaaagcactattaaccctt 163  Q
    || |||||||||| | |||||||||||| ||||||||||    
T  44412553 atgacctatattacagggggtaaagcaccattaaccctt 44412591  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 19625566 - 19625506
Alignment:
Q  167 ttattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    |||||||||||||||||  ||||||||| ||| |||||| |||||||||||||||||||||    
T  19625566 ttattaatgtgttccatcccattggatacaccacaatttgggaggaatggaaaattggatg 19625506  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 1263921 - 1263882
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1263921 taaagtcgtttttttatgacctattaggggggtattccaa 1263882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 2248534 - 2248495
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2248534 taaagtcgtttttttatgacctattaggggggtattccaa 2248495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 22335437 - 22335476
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22335437 taaagtcgtttttttatgacctattaggggggtattccaa 22335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 24374404 - 24374365
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24374404 taaagtcgtttttttatgacctattaggggggtattccaa 24374365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 43746022 - 43745983
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43746022 taaagtcgtttttttatgacctattaggggggtattccaa 43745983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 48848062 - 48848101
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48848062 taaagtcgtttttttatgacctattaggggggtattccaa 48848101  T

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Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 261729 - 261785
Alignment:
Q  167 ttattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattg 223  Q
    |||||||||||||||||||||||||||| ||||||| ||  | ||||||||||||||    
T  261729 ttattaatgtgttccatttcattggatacaccccaaattgaggggaatggaaaattg 261785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 10659884 - 10659919
Alignment:
Q  32 gtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||    
T  10659884 gtcgtttttttatgacctattaggggggtattccaa 10659919  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 24205104 - 24205069
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  24205104 taaagtcgtttttttatgacctattaggggggtatt 24205069  T

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Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 46146380 - 46146419
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  46146380 aaaataacttatattataaggggtaaagcactattaaccc 46146419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 1492865 - 1492831
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  1492865 tcgtttttttatgacctattaggggggtattccaa 1492831  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 12633577 - 12633519
Alignment:
Q  166 attattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattgg 224  Q
    ||||||||||| || |||| ||||||||| |||| ||||| ||||||||||||||||||    
T  12633577 attattaatgtatttcattccattggatacaccctaatttgggaggaatggaaaattgg 12633519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 12670793 - 12670827
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  12670793 tcgtttttttatgacctattaggggggtattccaa 12670827  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 19336176 - 19336142
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  19336176 tcgtttttttatgacctattaggggggtattccaa 19336142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 24205127 - 24205161
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  24205127 tcgtttttttatgacctattaggggggtattccaa 24205161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 24374426 - 24374460
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  24374426 tcgtttttttatgacctattaggggggtattccaa 24374460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 44412429 - 44412395
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  44412429 tcgtttttttatgacctattaggggggtattccaa 44412395  T

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Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 45639623 - 45639589
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  45639623 tcgtttttttatgacctattaggggggtattccaa 45639589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 24233620 - 24233669
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||| ||||| |||||||||||| |||||||| ||||||||||||||    
T  24233620 gaaaatcgaaaatgacctatattatagggggtaaaacactattaaccctt 24233669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 1492888 - 1492928
Alignment:
Q  28 taaagtcgtttt-tttatgacctattaggggggtattccaa 67  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  1492888 taaagtcgttttgtttatgacctattaggggggtattccaa 1492928  T

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Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 10659869 - 10659833
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattc 64  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10659869 taaagtcgttattttatgacctattaggggggtattc 10659833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 23417194 - 23417254
Alignment:
Q  165 aattattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattgga 225  Q
    |||||||||||||||||||| ||||||||| ||||||| || |  |||||| |||||||||    
T  23417194 aattattaatgtgttccattccattggatacaccccaaattggatggaatgaaaaattgga 23417254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 36878406 - 36878374
Alignment:
Q  35 gtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||    
T  36878406 gtttttttatgacctattaggggggtattccaa 36878374  T

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Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 1492814 - 1492759
Alignment:
Q  108 aggggagaaaatcaaaaataacctatattataagggg-taaagcactattaaccct 162  Q
    ||||| ||||| ||||||| |||||||||| |||||| ||||||||||||||||||    
T  1492814 aggggggaaaaccaaaaatgacctatattacaagggggtaaagcactattaaccct 1492759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 1830882 - 1830811
Alignment:
Q  91 taaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||| ||| ||||||| | ||| ||||||||||| || ||||||||| | |||||||||| |||||||||||    
T  1830882 taaaaaaaaaaatttacaagggggaaaatcaaaagtatcctatattacagggggtaaagccctattaaccct 1830811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 2456507 - 2456476
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||||||||||    
T  2456507 tcgtttttttatgacctattaggggggtattc 2456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 5077420 - 5077389
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||||||||||    
T  5077420 tcgtttttttatgacctattaggggggtattc 5077389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 5835865 - 5835827
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5835865 taaagtcgtttttttatgacctattag-ggggtattccaa 5835827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 8603665 - 8603703
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  8603665 taaagtcgtttttttatgacctatta-gggggtattccaa 8603703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 11352490 - 11352459
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||||||||||    
T  11352490 tcgtttttttatgacctattaggggggtattc 11352459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 12670770 - 12670732
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  12670770 taaagtcgtttttttatgacctattag-ggggtattccaa 12670732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 15108246 - 15108284
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  15108246 taaagtcgtttttttatgacctatta-gggggtattccaa 15108284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Original strand, 19336206 - 19336237
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||||||||||    
T  19336206 tcgtttttttatgacctattaggggggtattc 19336237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 24757500 - 24757461
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  24757500 taaagtcgtttttttatgacatattagggggatattccaa 24757461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 36878431 - 36878469
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  36878431 taaagtcgtttttttatgacctatta-gggggtattccaa 36878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 43746040 - 43746071
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  43746040 tttttttatgacctattaggggggtattccaa 43746071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 2248561 - 2248591
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  2248561 ttttttatgacctattaggggggtattccaa 2248591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 3402130 - 3402180
Alignment:
Q  114 gaaaatcaaaaataacctatattata-aggggtaaagcactattaaccctt 163  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||||||||    
T  3402130 gaaaatcgaaaatgacctatattacagaggggtaaagcactattaaccctt 3402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 19336122 - 19336040
Alignment:
Q  82 gggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttg 164  Q
    |||||||||| || |||  | |||| ||||| ||||| ||||||| |||||||||| | |||||||| ||| |||||||||||    
T  19336122 gggggtaaatcaaaaaaatattttacaggggggaaaaccaaaaatgacctatattacagggggtaaaacaccattaacccttg 19336040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 21852895 - 21852929
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| ||||||||    
T  21852895 tcgtttttttatgacctattagggggatattccaa 21852929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 22335413 - 22335379
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| ||||||||    
T  22335413 tcgtttttttatgacctattagggggatattccaa 22335379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 30335309 - 30335275
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||| |||||||||||||||||||||    
T  30335309 tcgtttttttatgccctattaggggggtattccaa 30335275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 36374204 - 36374147
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||| |||||| |||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  36374204 tttacaggggataaaatcgaaaatgacctatattat-aggggtaaaacactattaaccc 36374147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 42695068 - 42695026
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| | ||||||||||||||||||||||| ||||||||||    
T  42695068 aaaaatgatctatattataaggggtaaagcaccattaaccctt 42695026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 45633625 - 45633659
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||| |||||||||||||    
T  45633625 tcgtttttttatgacctattaagggggtattccaa 45633659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 45639644 - 45639674
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  45639644 taaagtcgtttttttatgacctattaggggg 45639674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 1831967 - 1832043
Alignment:
Q  91 taaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttgaatt 168  Q
    |||| ||| ||||||| ||||| ||||||||||| |  ||||||||| | |||||||||| |||||||||||| ||||    
T  1831967 taaaaaaaaaaatttacagggg-gaaaatcaaaagtgccctatattacagggggtaaagccctattaaccctttaatt 1832043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 33757464 - 33757403
Alignment:
Q  107 taggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttgaatt 168  Q
    |||||| ||||||||||| | |||||||||| | |||||||||  |||||||||||| ||||    
T  33757464 taggggggaaaatcaaaagtgacctatattacagggggtaaagatctattaaccctttaatt 33757403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 35759887 - 35759838
Alignment:
Q  162 ttgaattattaatgtgttccatttcattggatataccccaatttaggagg 211  Q
    ||||||||||||||||||||||| ||||| ||| |||||| ||| |||||    
T  35759887 ttgaattattaatgtgttccattccattgcatacaccccagtttgggagg 35759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 48848144 - 48848197
Alignment:
Q  108 aggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    ||||| |||||  |||||| |||||||||||| |||||||||||| ||||||||    
T  48848144 aggggggaaaacaaaaaatgacctatattatagggggtaaagcaccattaaccc 48848197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 12670715 - 12670627
Alignment:
Q  82 gggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataagggg-taaagcactattaacccttgaatt 168  Q
    |||||||||| || ||||| |||| | ||||| ||||| ||||||||||||||| || | |||| |||||||| |||||||||| ||||    
T  12670715 gggggtaaatcaaaaaatatattttacaggggtgaaaaccaaaaataacctataatacaggggggtaaagcaccattaacccttcaatt 12670627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 13593441 - 13593505
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggg-gtaaagcactattaacccttgaa 166  Q
    |||||||||| ||||| | ||||| | |||||||||||||| | ||| |||||||||||||||||    
T  13593441 tttataggggtgaaaaccgaaaatgatctatattataagggtgaaaaacactattaacccttgaa 13593505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 13797587 - 13797667
Alignment:
Q  81 agggggtaaat-aaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacc 160  Q
    ||||||||||| ||| |||| | |||| |||||||||||||  |||| |||||||||| | |||||||||  |||||||||    
T  13797587 agggggtaaatcaaaaaaattattttacaggggagaaaatcggaaatgacctatattacagggggtaaagacctattaacc 13797667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 15108146 - 15108090
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaac 159  Q
    |||| ||| ||||||| ||||||| |||||||||| | |||||||||||| ||||||    
T  15108146 tttacaggagagaaaaccaaaaatgacctatattacagggggtaaagcaccattaac 15108090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 20164434 - 20164482
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| ||||| |||||||||| | |||||||| ||||||||||||||    
T  20164434 aaaatcgaaaatgacctatattacagggggtaaaacactattaaccctt 20164482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 21852843 - 21852764
Alignment:
Q  83 ggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||||| || ||||| |||| | |||||| ||||| |||||||| |||||||| | |||||||||||| |||||||||    
T  21852843 ggggtaaatcaaaaaatatattttacagggga-aaaataaaaaataatctatattacagggggtaaagcaccattaaccct 21852764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 21852944 - 21853028
Alignment:
Q  79 acagggggtaaataaataaata-aatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| | | |||| ||| | ||||| ||||||| |||||||||| | | |||||||||| |||||||||    
T  21852944 acagggggtaaataaaaaaaaatattttacaggagggaaaaccaaaaatgacctatattacaggaggtaaagcaccattaaccct 21853028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 44569052 - 44569136
Alignment:
Q  79 acagggggtaaat-aaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||||||||| ||| |||| | |||| ||||||||||||| ||||| |||| ||||| | ||| |||||  |||||||||||    
T  44569052 acagggggtaaatcaaaaaaattattttacaggggagaaaatcgaaaatgacctgtattacaggggataaagacctattaaccct 44569136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 24215719 - 24215800
Alignment:
Q  82 gggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||||||| ||| ||||||| ||||||||||| || |||| |||||||||| | |||||||||  ||||||||||||    
T  24215719 gggggtaaataaaaaaaaaaatttacaggggagaaaaccagaaatgacctatattacagggggtaaagacctattaaccctt 24215800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 28292208 - 28292344
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaannnnnnnnnnnacagggggtaaat-aaataaataaatttataggggagaaaatcaaaaat 126  Q
    |||||||||||||||||||||||||| |||||||||||||           ||||||||||||| ||| |||  | |||| ||||| |||||| ||||||    
T  28292208 taaagtcgtttttttatgacctatta-gggggtattccaaaaaaaataattacagggggtaaatcaaaaaaaatattttacagggg-gaaaataaaaaat 28292305  T
Q  127 aacctatattataaggggtaaagcactattaacccttga 165  Q
     |||||||||| ||||||||||||||  |||||||||||    
T  28292306 gacctatattacaaggggtaaagcaccgttaacccttga 28292344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 35033797 - 35033857
Alignment:
Q  167 ttattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    |||||||||||||||||| ||||||||| | || ||||| |||||||||||||||||||||    
T  35033797 ttattaatgtgttccattccattggatacatcctaatttgggaggaatggaaaattggatg 35033857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 4431447 - 4431486
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4431447 taaagtcgtttttttatgacctattaggggggtattccaa 4431486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 8590783 - 8590744
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8590783 taaagtcgtttttttatgacctattaggggggtattccaa 8590744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 35904771 - 35904810
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35904771 taaagtcgtttttttatgacctattaggggggtattccaa 35904810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 42861517 - 42861478
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42861517 taaagtcgtttttttatgacctattaggggggtattccaa 42861478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 168
Target Start/End: Complemental strand, 15522778 - 15522690
Alignment:
Q  82 gggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattata--aggggtaaagcactattaacccttgaatt 168  Q
    ||||||||||||| ||| ||||||| ||||| ||||| ||||||| |||||||||| |   |||||||||||| |||||||||| ||||    
T  15522778 gggggtaaataaaaaaaaaaatttacaggggggaaaaccaaaaatgacctatattacagggggggtaaagcaccattaaccctttaatt 15522690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 3475623 - 3475485
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaannnnnnnnnnna----cagggggtaaataaataaataaatttataggggagaaaatcaaa 123  Q
    |||||||||||||||||||||||||| |||||||||||||           |    |||||||||||| || ||| ||| ||| ||||| |||||  |||    
T  3475623 taaagtcgtttttttatgacctattacgggggtattccaaaaaaaaaaaaaaattacagggggtaaatcaaaaaaaaaaattacaggggggaaaacaaaa 3475524  T
Q  124 aataacctatattataaggggtaaagcactattaaccct 162  Q
    ||| |||||||||| | |||||||||||| |||||||||    
T  3475523 aatgacctatattacagggggtaaagcaccattaaccct 3475485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 31110404 - 31110440
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattc 64  Q
    |||||||||||||||||||||||||||||||||||||    
T  31110404 taaagtcgtttttttatgacctattaggggggtattc 31110440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 52431292 - 52431256
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattc 64  Q
    |||||||||||||||||||||||||||||||||||||    
T  52431292 taaagtcgtttttttatgacctattaggggggtattc 52431256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 5498997 - 5498958
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  5498997 taaagtcgtttttttatgacttattaggggggtattccaa 5498958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 12144681 - 12144642
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  12144681 taaagtcgtttttctatgacctattaggggggtattccaa 12144642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 30966742 - 30966610
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaannnnnnnnnnn-acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacc 130  Q
    |||||| ||||||||||||||||||||||||||||            ||||||||||||| || ||| | |||| | ||||| |||||  |||||| |||    
T  30966742 tcgtttatttatgacctattaggggggtattccaaattattttttttacagggggtaaatcaaaaaaaatattttacaggggggaaaacaaaaaatgacc 30966643  T
Q  131 tatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||| |||||||||||| ||||||||||    
T  30966642 tatattatagggggtaaagcaccattaaccctt 30966610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 30966768 - 30966807
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  30966768 taaagtcgtttttttatgatctattaggggggtattccaa 30966807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 31592648 - 31592609
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  31592648 taaagtcgtttttttatgacctattagggaggtattccaa 31592609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 42802464 - 42802425
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  42802464 taaagtcgtttttttatgacctattagggaggtattccaa 42802425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 46731085 - 46731046
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  46731085 taaagttgtttttttatgacctattaggggggtattccaa 46731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 5420174 - 5420208
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  5420174 tcgtttttttatgacctattaggggggtattccaa 5420208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 9885083 - 9885049
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  9885083 tcgtttttttatgacctattaggggggtattccaa 9885049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 15782400 - 15782434
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  15782400 tcgtttttttatgacctattaggggggtattccaa 15782434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 23981250 - 23981216
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  23981250 tcgtttttttatgacctattaggggggtattccaa 23981216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 27449995 - 27449961
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  27449995 tcgtttttttatgacctattaggggggtattccaa 27449961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 34318539 - 34318505
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  34318539 tcgtttttttatgacctattaggggggtattccaa 34318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 35804017 - 35804051
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtat 62  Q
    |||||||||||||||||||||||||||||||||||    
T  35804017 taaagtcgtttttttatgacctattaggggggtat 35804051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 35904748 - 35904714
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  35904748 tcgtttttttatgacctattaggggggtattccaa 35904714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 54097229 - 54097195
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  54097229 tcgtttttttatgacctattaggggggtattccaa 54097195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 55432563 - 55432525
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  55432563 aaagtcgcttttttatgacctattaggggggtattccaa 55432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 50859317 - 50859268
Alignment:
Q  166 attattaatgtgttccatttcattggatataccccaatttaggaggaatg 215  Q
    ||||||||||||||||||| ||||||||| ||||||| || |||||||||    
T  50859317 attattaatgtgttccattccattggatacaccccaaattgggaggaatg 50859268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 6439268 - 6439184
Alignment:
Q  79 acagggggtaaataaataaataaa-tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| ||| |||| ||||   |||| | ||||| |||||||||| | ||||||||||||||||||||||    
T  6439268 acagggggtaaataaaaaaaaaaaatttacagggtgtaaaaccgaaaatgacctatattacagggggtaaagcactattaaccct 6439184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 7272347 - 7272266
Alignment:
Q  79 acagggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataa-ggggtaaagcactattaaccc 161  Q
    |||||||||||||||||||| ||  ||| ||||| ||||| | |||||||||||||||| || |||||||||  ||||||||||    
T  7272347 acagggggtaaataaataaaaaa--ttacaggggggaaaaccgaaaataacctatattacaagggggtaaagacctattaaccc 7272266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 30966824 - 30966907
Alignment:
Q  81 agggggtaaataaataaataaa--tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||| ||| ||   |||| |||||  |||| |||||||||||||||||| |||||||||| ||| |||||||||    
T  30966824 agggggtaaataaaaaaaaaatattttacagggggaaaaaccaaaaataacctatattacaaggggtaaatcaccattaaccct 30966907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 35904826 - 35904910
Alignment:
Q  79 acagggggtaaataaataaata-aatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| | | |||| ||||| |||||| |||||| |||||||||| | || ||||||||| |||||||||    
T  35904826 acagggggtaaataaaaaaaaatattttacaggggggaaaataaaaaatgacctatattacagggagtaaagcaccattaaccct 35904910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 51353429 - 51353497
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttgaatt 168  Q
    ||||||| ||||| ||||| || |||| |||||||||| | |||||||| |||||||||||| ||||||    
T  51353429 aaatttacaggggggaaaaccagaaatgacctatattacagggggtaaatcactattaacccatgaatt 51353497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 4431339 - 4431292
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    ||||| |||||||||||||||||| | |||||||||||| ||||||||    
T  4431339 gaaaaccaaaaataacctatattacagggggtaaagcaccattaaccc 4431292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 4928978 - 4929016
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  4928978 taaagtcgtttttttatgacctatta-gggggtattccaa 4929016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 12144708 - 12144739
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  12144708 tttttttatgacctattaggggggtattccaa 12144739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 15522834 - 15522799
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    |||||| |||||||||||||||||||||||||||||    
T  15522834 taaagtagtttttttatgacctattaggggggtatt 15522799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 15782320 - 15782261
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||| ||||| |||||  |||||| |||||||||| |||||||||||||| |||||||||    
T  15782320 tttacaggggggaaaacaaaaaatgacctatattacaaggggtaaagcaccattaaccct 15782261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 15782390 - 15782359
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  15782390 tttttttatgacctattaggggggtattccaa 15782359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 20514808 - 20514846
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20514808 taaagtcgtttttttatgacctatta-gggggtattccaa 20514846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 22452094 - 22452129
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||| |||||||||    
T  22452094 taaagtcgtttttttatgacctattatgggggtatt 22452129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 27450017 - 27450055
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  27450017 taaagtcgtttttttatgacctatt-ggggggtattccaa 27450055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 34853271 - 34853310
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  34853271 taaagtcgtttttttatgatctattaagggggtattccaa 34853310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 46360819 - 46360857
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  46360819 taaagtcgtttttttatgacctatta-gggggtattccaa 46360857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 46731136 - 46731183
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||| ||||||||||||||||||| |||||||| ||| ||||||||    
T  46731136 gaaaataaaaaataacctatattatagggggtaaaacaccattaaccc 46731183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 50719927 - 50719966
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaaccc 161  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  50719927 aaaatgacctatattatagggggtaaagcactattaaccc 50719966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 1952959 - 1953017
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||| |||||||||||  ||||||||||||||||| | ||||||||||||  |||||||    
T  1952959 tttacaggggagaaaacaaaaaataacctatattacagggggtaaagcaccgttaaccc 1953017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 3475648 - 3475682
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| ||||||||    
T  3475648 tcgtttttttatgacctattagggggatattccaa 3475682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 4928954 - 4928920
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||| ||||||||||||||||||||||    
T  4928954 tcgtttttttataacctattaggggggtattccaa 4928920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 5496467 - 5496501
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||| ||||||||||||||||||||||||||||||    
T  5496467 tcgtctttttatgacctattaggggggtattccaa 5496501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 7085967 - 7085937
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  7085967 taaagtcgtttttttatgacctattaggggg 7085937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 7085989 - 7086023
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  7085989 tcgtttttttatgacctattaggggggcattccaa 7086023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 12878807 - 12878773
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||| ||||||||||||||||||||||||||||    
T  12878807 tcgtttatttatgacctattaggggggtattccaa 12878773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 13033019 - 13032989
Alignment:
Q  33 tcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||||    
T  13033019 tcgtttttttatgacctattaggggggtatt 13032989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 13910774 - 13910808
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||| |||||    
T  13910774 tcgtttttttatgacctattaggggggtaatccaa 13910808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 15522857 - 15522891
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||| ||||||||||    
T  15522857 tcgtttttttatgacctattagggaggtattccaa 15522891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 22452069 - 22452035
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||| ||||||||||||||||||||||    
T  22452069 tcgtttttttataacctattaggggggtattccaa 22452035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 31110458 - 31110528
Alignment:
Q  79 acagggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaag 149  Q
    ||||||||||||| || ||| ||||||| |||||  |||| ||||||| |||||||||| | |||||||||    
T  31110458 acagggggtaaatcaaaaaaaaaatttacagggggaaaaaccaaaaatgacctatattacagggggtaaag 31110528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 33295079 - 33295109
Alignment:
Q  33 tcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||||    
T  33295079 tcgtttttttatgacctattaggggggtatt 33295109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 35803994 - 35803960
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  35803994 tcgtttttttatgacctattaggggggcattccaa 35803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 36405777 - 36405811
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||| ||||||||||    
T  36405777 tcgtttttttatgacctattagggaggtattccaa 36405811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 40997641 - 40997611
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  40997641 taaagtcgtttttttatgacctattaggggg 40997611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 40997670 - 40997700
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  40997670 ttttttatgacctattaggggggtattccaa 40997700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 44311162 - 44311128
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||| ||||||||||||||||||||||    
T  44311162 tcgtttttttataacctattaggggggtattccaa 44311128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 1952877 - 1952914
Alignment:
Q  28 taaagtcgtttt-tttatgacctattaggggggtattc 64  Q
    |||||||||||| |||||||||||||||||||||||||    
T  1952877 taaagtcgttttttttatgacctattaggggggtattc 1952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 6463713 - 6463742
Alignment:
Q  28 taaagtcgtttttttatgacctattagggg 57  Q
    ||||||||||||||||||||||||||||||    
T  6463713 taaagtcgtttttttatgacctattagggg 6463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 14946280 - 14946325
Alignment:
Q  110 gggagaaaatcaaaaataacctatattataaggggtaaagcactat 155  Q
    ||||||||||| |||||||||||||||| | |||||||| ||||||    
T  14946280 gggagaaaatcgaaaataacctatattacagggggtaaaacactat 14946325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 24661221 - 24661286
Alignment:
Q  79 acagggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataagggg 144  Q
    ||||||||||||| || |||||| |||| |||||  |||| | |||||||||||||||| ||||||    
T  24661221 acagggggtaaatcaaaaaataattttacagggggaaaaaccgaaaataacctatattacaagggg 24661286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 35370398 - 35370447
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  35370398 gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 35370447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 46944196 - 46944139
Alignment:
Q  166 attattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattg 223  Q
    |||||||||||| | |||| ||||||||| ||||||| || || ||||||||||||||    
T  46944196 attattaatgtgctacattccattggatacaccccaaattgggtggaatggaaaattg 46944139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 9885157 - 9885237
Alignment:
Q  79 acagggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataagggg-taaagcactattaa 158  Q
    ||||||||||||| || |||| | |||| |||   |||||| ||||||||||||||||| |||||| |||||||| |||||    
T  9885157 acagggggtaaatcaaaaaattattttacaggaaggaaaataaaaaataacctatattacaaggggataaagcaccattaa 9885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 13032970 - 13032886
Alignment:
Q  79 acagggggtaaataaataaata-aatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| | | |||| ||||  ||||| ||||||| |||||||||| | |||||||| ||| |||||||||    
T  13032970 acagggggtaaataaaaaaaaatattttacagggaggaaaaccaaaaatgacctatattacagggggtaaaacaccattaaccct 13032886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 13033044 - 13033084
Alignment:
Q  28 taaagtcgttttttt-atgacctattaggggggtattccaa 67  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  13033044 taaagtcgttttttttataacctattaggggggtattccaa 13033084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 13910850 - 13910910
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattata-aggggtaaagcactattaaccct 162  Q
    |||| ||||||||||| ||||||| |||||||||| |  |||||||||||| |||||||||    
T  13910850 tttacaggggagaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccct 13910910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 16589028 - 16588980
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||| |||||||||||||||| | | |||||| |||||||||||||    
T  16589028 gaaaatcgaaaataacctatattacaggaggtaaaacactattaaccct 16588980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 20986070 - 20986110
Alignment:
Q  131 tatattataaggggtaaagcactattaacccttgaattatt 171  Q
    ||||||||| |||||||| |||||||||||||| |||||||    
T  20986070 tatattatagggggtaaaacactattaacccttaaattatt 20986110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 26144224 - 26144156
Alignment:
Q  95 taaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||||| ||| | |||||  |||||| |||||||||| | |||||||||||| ||||||||||    
T  26144224 taaaaaaatttacaggagggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccctt 26144156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 36405864 - 36405912
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  36405864 aaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 36405912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 36680206 - 36680242
Alignment:
Q  127 aacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  36680206 aacctatattatagggggtaaagcaccattaaccctt 36680242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 41809872 - 41809932
Alignment:
Q  167 ttattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattggatg 227  Q
    ||||||||| |||||||| ||||| ||| | ||||| || || ||||||||||||||||||    
T  41809872 ttattaatgcgttccattccattgaatacatcccaaattggggggaatggaaaattggatg 41809932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 54097146 - 54097098
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||| |||||| |||||||||| | |||||||||||| ||||||||||    
T  54097146 aaaataaaaaatgacctatattacagggggtaaagcaccattaaccctt 54097098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 28199194 - 28199250
Alignment:
Q  167 ttattaatgtgttccatttcattggatataccccaatttaggaggaatggaaaattg 223  Q
    |||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||    
T  28199194 ttattaatgtgttccatcccattggatacaccccaatttgggaggaatggaaaattg 28199250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 7785217 - 7785178
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7785217 taaagtcgtttttttatgacctattaggggggtattccaa 7785178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 22116233 - 22116154
Alignment:
Q  82 gggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||||||||||||| ||||||| ||||| ||||| | ||||| |||||||||| | |||||||||  |||||||||||    
T  22116233 gggggtaaataaataaaaaaatttacagggg-gaaaaccgaaaatgacctatattacagggggtaaagacctattaaccct 22116154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 36944159 - 36944288
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaannnnnnnnnnnacagggggtaaataaataaataaatttataggggagaaaatcaaaaataaccta 132  Q
    |||||||||||||||||||||||||||||||||||           ||| ||||||||| || |||  | |||| ||| | |||||  |||||| |||||    
T  36944159 tcgtttttttatgacctattaggggggtattccaaaaaaacaaattacaaggggtaaatcaaaaaaatattttacaggtgggaaaacaaaaaatgaccta 36944258  T
Q  133 tattataaggggtaaagcactattaaccct 162  Q
    ||||| | |||||||||||| |||||||||    
T  36944259 tattacagggggtaaagcaccattaaccct 36944288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 23834387 - 23834426
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  23834387 taaagtcgtttttttatgacctattagaggggtattccaa 23834426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 30728844 - 30728883
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  30728844 taaagtcgtttttttatggcctattaggggggtattccaa 30728883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 35337056 - 35337095
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  35337056 taaagtcgtttttttatgacctattaggagggtattccaa 35337095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 758719 - 758805
Alignment:
Q  79 acagggggtaaataaataaataaat-ttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttg 164  Q
    |||||||||||||||| ||| |||  ||| ||||| ||||| |  |||| |||||||||| | ||||||||||||||||||||||||    
T  758719 acagggggtaaataaaaaaaaaaaaattacaggggggaaaaccggaaatgacctatattacagggggtaaagcactattaacccttg 758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 7327902 - 7327868
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||||||||    
T  7327902 aaagtcgtttttttatgacctattaggggggtatt 7327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 18543931 - 18543965
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  18543931 tcgtttttttatgacctattaggggggtattccaa 18543965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 23834172 - 23834138
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  23834172 tcgtttttttatgacctattaggggggtattccaa 23834138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 31108480 - 31108446
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  31108480 tcgtttttttatgacctattaggggggtattccaa 31108446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 32845559 - 32845525
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  32845559 tcgtttttttatgacctattaggggggtattccaa 32845525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 32845638 - 32845720
Alignment:
Q  81 agggggtaaat-aaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||||||| ||| ||| ||||||| ||||| |||||  |||||| |||||||||| | |||||||||||| |||||||||    
T  32845638 agggggtaaatcaaaaaaaaaaatttacaggggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccct 32845720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 33441636 - 33441602
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  33441636 tcgtttttttatgacctattaggggggtattccaa 33441602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 35337031 - 35336997
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  35337031 tcgtttttttatgacctattaggggggtattccaa 35336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 43015101 - 43015067
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  43015101 tcgtttttttatgacctattaggggggtattccaa 43015067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 44611087 - 44611121
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  44611087 tcgtttttttatgacctattaggggggtattccaa 44611121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 2526401 - 2526352
Alignment:
Q  112 gagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    ||||||| ||||||| | |||||||| |||||||||||||||||||||||    
T  2526401 gagaaaaccaaaaattagctatattacaaggggtaaagcactattaaccc 2526352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 32196039 - 32195904
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaannnnnnnnnnn--acagggggtaaataaataaataaatttataggggagaaaatcaaaaa 125  Q
    ||||||||||||||||||||||||||||||| ||||||||             |||||||||||||||| ||| |||||   ||||| ||||| |||| |    
T  32196039 taaagtcgtttttttatgacctattaggggg-tattccaaaaaaaataaaattacagggggtaaataaaaaaaaaaattacaagggg-gaaaaccaaata 32195942  T
Q  126 taacctatattataaggggtaaagcactattaaccctt 163  Q
    | |||||||||||| |||||||| ||| ||||||||||    
T  32195941 tgacctatattatagggggtaaaacaccattaaccctt 32195904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 18048874 - 18048815
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||||  |||| ||||||| |||||||||| | |||||||||||||||||||||||    
T  18048874 tttatagggggtaaaaccaaaaatgacctatattaca-ggggtaaagcactattaaccctt 18048815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 31122293 - 31122333
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  31122293 aaaatgacctatattataaggggtaaaacactattaaccct 31122333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 38358345 - 38358266
Alignment:
Q  82 gggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||||||||||||| ||||||| |||||| |||| || |||| |||| ||||| | || ||||| |||||||||||||    
T  38358345 gggggtaaataaataaaaaaatttacagggga-aaaaccagaaatgacctttattacagggagtaaaacactattaaccct 38358266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 64
Target Start/End: Complemental strand, 493860 - 493825
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||| ||||||||||    
T  493860 aaagtcgtttttttatgacctattatgggggtattc 493825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 8467342 - 8467304
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  8467342 taaagtcgtttttttatgacctattag-ggggtattccaa 8467304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 14793405 - 14793444
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  14793405 taaagtcgtttttttatgacctattagggaagtattccaa 14793444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 24952036 - 24952113
Alignment:
Q  83 ggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||| ||| ||||| | ||||| ||||| ||||||| |||||||||| | |||||||||||| |||||||||    
T  24952036 ggggtaaataaaaaaaaaaatt-acagggg-gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 24952113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 28739545 - 28739506
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  28739545 taaagtcgtttttttatgacctattaggggaatattccaa 28739506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 31108502 - 31108541
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  31108502 taaagttgtttttttatgacctattaagggggtattccaa 31108541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 32650005 - 32650043
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  32650005 taaagtcgtttttttatgacctatta-gggggtattccaa 32650043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 39341324 - 39341265
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||| ||||||||||| ||||||| |||||||||| | |||||||| ||| |||||||||    
T  39341324 tttacaggggagaaaaccaaaaatgacctatattacagggggtaaaacaccattaaccct 39341265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 40385394 - 40385432
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  40385394 taaagtcgtttttttatgacctatta-gggggtattccaa 40385432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 43015123 - 43015161
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  43015123 taaagtcgtttttttatgacctatta-gggggtattccaa 43015161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 43766401 - 43766439
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  43766401 taaagtcgtttttttatgacctatta-gggggtattccaa 43766439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 44611064 - 44611025
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  44611064 taaaatcgttgttttatgacctattaggggggtattccaa 44611025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 45632676 - 45632645
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||||||||||    
T  45632676 tcgtttttttatgacctattaggggggtattc 45632645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 493882 - 493916
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||| |||||||||||||||||||||||||||||    
T  493882 tcgttcttttatgacctattaggggggtattccaa 493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 5558353 - 5558319
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||| |||||||||||    
T  5558353 tcgtttttttatgacctattaggagggtattccaa 5558319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 7327922 - 7327956
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| ||||||||    
T  7327922 tcgtttttttatgacctattagggggatattccaa 7327956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 8467365 - 8467399
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||| ||||||||||||||||||||    
T  8467365 tcgtttttttatgatctattaggggggtattccaa 8467399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 11094038 - 11093976
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||| | ||| ||||| | ||||| |||||||||||| |||||||| |||||||||||||    
T  11094038 aaatttacaagggggaaaaccgaaaatgacctatattatagggggtaaaacactattaaccct 11093976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 11115395 - 11115365
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  11115395 taaagtcgtttttttatgacctattaggggg 11115365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 13691872 - 13691842
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  13691872 ttttttatgacctattaggggggtattccaa 13691842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 17920204 - 17920285
Alignment:
Q  82 gggggtaaataaataaataaa--tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    ||||||||||||| ||| |||  |||| |||| ||||||  |||||| |||||||||| | |||||||||||| ||||||||    
T  17920204 gggggtaaataaaaaaaaaaaaatttacagggaagaaaactaaaaatgacctatattacagggggtaaagcaccattaaccc 17920285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 26756570 - 26756536
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||| ||||||||||||||||||||    
T  26756570 tcgtttttttatgatctattaggggggtattccaa 26756536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 32196062 - 32196096
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| ||||||||    
T  32196062 tcgtttttttatgacctattagggggatattccaa 32196096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 32649981 - 32649947
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||| |||||||||    
T  32649981 tcgtttttttatgacctattaggggagtattccaa 32649947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 33441546 - 33441504
Alignment:
Q  120 caaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||||| | |||||||||||| |||||||||    
T  33441546 caaaaataacctatattacagggggtaaagcaccattaaccct 33441504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 36795474 - 36795516
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactatta 157  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||    
T  36795474 aaaatcaaaaataacttatattaaaaggggtaaagcaatatta 36795516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 44610973 - 44610927
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||| |||||||||||||||||| | |||||||||||| ||||||||    
T  44610973 aaaaccaaaaataacctatattacagggggtaaagcaccattaaccc 44610927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 29097076 - 29097125
Alignment:
Q  113 agaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||| | |||||||| ||||||| |||||||||| |||||||||||||    
T  29097076 agaaaaccgaaaataacttatattacaaggggtaaaacactattaaccct 29097125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 29640891 - 29640858
Alignment:
Q  34 cgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||| ||||||||||||    
T  29640891 cgtttttttatgacctattagaggggtattccaa 29640858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 33441659 - 33441688
Alignment:
Q  28 taaagtcgtttttttatgacctattagggg 57  Q
    ||||||||||||||||||||||||||||||    
T  33441659 taaagtcgtttttttatgacctattagggg 33441688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 34181694 - 34181665
Alignment:
Q  38 tttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||    
T  34181694 tttttatgacctattaggggggtattccaa 34181665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 42162439 - 42162496
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacc 160  Q
    ||||||||||| |||| |||||||||| ||||||| | | |||||| |||||||||||    
T  42162439 tttataggggataaaaccaaaaataacatatattacatgtggtaaaacactattaacc 42162496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 874392 - 874352
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||| ||||||||||||||||||||| || ||||||||||    
T  874392 aaaatgacctatattataaggggtaaaacattattaaccct 874352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 5856280 - 5856324
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaac 159  Q
    ||||| ||||||||||||||||| | |||||||||||| ||||||    
T  5856280 aaaataaaaaataacctatattacagggggtaaagcaccattaac 5856324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 10374186 - 10374138
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||||| ||||| |||||||||| | ||||||||||||| ||||||||    
T  10374186 gaaaatcgaaaatgacctatattacagggggtaaagcactgttaaccct 10374138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 11115342 - 11115259
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| | |||| | |||||| ||||  ||||||||||||||||| | |||||||| ||| |||||||||    
T  11115342 acagggggtaaataaaaaaaaatattttacagggga-aaaacaaaaaataacctatattacagggggtaaaacaccattaaccct 11115259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 11740692 - 11740779
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattata--aggggtaaagcactattaaccctt 163  Q
    ||||||||||||| || ||| | |||| ||||||| |||||| ||||||||||||||||| |   ||||||||| || ||||||||||    
T  11740692 acagggggtaaatcaaaaaaaatattttataggggggaaaataaaaaataacctatattacagggggggtaaagtaccattaaccctt 11740779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 14793465 - 14793513
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||| ||||||| |||||||||| | |||||||||||| |||||||||    
T  14793465 gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 14793513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 24951986 - 24951903
Alignment:
Q  79 acagggggtaaataaataaata-aatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| | | |||| ||||| ||||| ||||||| |||||||||| | ||| |||||||| |||||||||    
T  24951986 acagggggtaaataaaaaaaaatattttacagggg-gaaaaccaaaaatgacctatattacaggggttaaagcaccattaaccct 24951903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 26502591 - 26502651
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggg-gtaaagcactattaaccct 162  Q
    |||||||||| |||||||| |||| || ||||||| ||||| | |||||||||||||||||    
T  26502591 tttataggggcgaaaatcagaaatgacatatattacaagggtgaaaagcactattaaccct 26502651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 29640842 - 29640763
Alignment:
Q  82 gggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||||||| || ||||| |||| | ||||| ||||| ||||||| |||||||||| | |||||||||||| ||||||||    
T  29640842 gggggtaaatcaaaaaatatattttacagggg-gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccc 29640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 34181733 - 34181761
Alignment:
Q  37 ttttttatgacctattaggggggtattcc 65  Q
    |||||||||||||||||||||||||||||    
T  34181733 ttttttatgacctattaggggggtattcc 34181761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 40321613 - 40321694
Alignment:
Q  79 acagggggtaaataaataaataaa-tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||||||||||||| ||| ||| |||| ||||||  ||||| ||||| |||||||||| | | ||||||||||| |||||||    
T  40321613 acagggggtaaataaaaaaaaaaaatttacagggga--aaatcgaaaatgacctatattacaggaggtaaagcacttttaaccc 40321694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 43766491 - 43766539
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||| ||||||| |||||||||| | |||||||||||| |||||||||    
T  43766491 gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 43766539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 12548 - 12587
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12548 taaagtcgtttttttatgacctattaggggggtattccaa 12587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 12522 - 12491
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  12522 tttttttatgacctattaggggggtattccaa 12491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 5160447 - 5160486
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5160447 taaagtcgtttttttatgacctattaggggggtattccaa 5160486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 11424250 - 11424211
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11424250 taaagtcgtttttttatgacctattaggggggtattccaa 11424211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 23566030 - 23565991
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23566030 taaagtcgtttttttatgacctattaggggggtattccaa 23565991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 37611429 - 37611468
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37611429 taaagtcgtttttttatgacctattaggggggtattccaa 37611468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 45530639 - 45530600
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45530639 taaagtcgtttttttatgacctattaggggggtattccaa 45530600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 144
Target Start/End: Complemental strand, 15152185 - 15152068
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaannnnnnnnnnnacagggggtaaataaataaata-aatttataggggagaaaatcaaaaat 126  Q
    ||||||| ||||||||||||||||||||||||||||||||           |||||||||||||||| ||||| | |||| ||||| |||||  ||||||    
T  15152185 taaagtcatttttttatgacctattaggggggtattccaaaaaaaaaaattacagggggtaaataaaaaaatatattttacaggggggaaaacaaaaaat 15152086  T
Q  127 aacctatattataagggg 144  Q
     || ||||||| ||||||    
T  15152085 gacatatattacaagggg 15152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 9857409 - 9857448
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  9857409 taaagttgtttttttatgacctattaggggggtattccaa 9857448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 11105905 - 11105870
Alignment:
Q  32 gtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||    
T  11105905 gtcgtttttttatgacctattaggggggtattccaa 11105870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 16358509 - 16358548
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  16358509 taaagtcgtttttttatgacctattagggggatattccaa 16358548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 19158086 - 19158125
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19158086 taaagtcgtttttttatgacctattagggggctattccaa 19158125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 21692553 - 21692588
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  21692553 taaagtcgtttttttatgacctattaggggggtatt 21692588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 26711483 - 26711448
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  26711483 taaagtcgtttttttatgacctattaggggggtatt 26711448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 43382889 - 43382850
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  43382889 taaagtcgtttttttatgaactattaggggggtattccaa 43382850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 4923506 - 4923556
Alignment:
Q  118 atcaaaaataacctatattataaggggtaaagcactattaacccttgaatt 168  Q
    ||||||||| |||||||||| |||| ||||||||| |||||||||||||||    
T  4923506 atcaaaaatgacctatattacaaggagtaaagcaccattaacccttgaatt 4923556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 5160425 - 5160391
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  5160425 tcgtttttttatgacctattaggggggtattccaa 5160391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 16358484 - 16358450
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  16358484 tcgtttttttatgacctattaggggggtattccaa 16358450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 19158062 - 19158028
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  19158062 tcgtttttttatgacctattaggggggtattccaa 19158028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 39302015 - 39301981
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  39302015 tcgtttttttatgacctattaggggggtattccaa 39301981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 41708932 - 41708899
Alignment:
Q  34 cgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||    
T  41708932 cgtttttttatgacctattaggggggtattccaa 41708899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 23428893 - 23428925
Alignment:
Q  35 gtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||    
T  23428893 gtttttttatgacctattaggggggtattccaa 23428925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 25653762 - 25653702
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||| ||||| ||||||| |||||||||| | |||||||| ||||||||||||||    
T  25653762 tttacaggggggaaaaccaaaaatgacctatattacagggggtaaaacactattaaccctt 25653702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 45530585 - 45530501
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||| ||||||||| ||||| |||| | ||||  |||||| |||||| |||||||||| | |||||||||||| |||||||||    
T  45530585 acagggcgtaaataaaaaaatatattttacagggcggaaaataaaaaatgacctatattacagggggtaaagcaccattaaccct 45530501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 94261 - 94226
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||| |||||||    
T  94261 taaagtcgtttttttatgacctattaggagggtatt 94226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 11272849 - 11272916
Alignment:
Q  96 aaataaatttataggggagaaaatcaaaaataacctatattataagg-ggtaaagcactattaaccct 162  Q
    |||||| |||| ||||| ||||| |  ||||||||||||||| |||| ||||||||||||||||||||    
T  11272849 aaataattttacaggggggaaaaccggaaataacctatattacaaggaggtaaagcactattaaccct 11272916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 11424265 - 11424296
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  11424265 tttttttatgacctattaggggggtattccaa 11424296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 18367181 - 18367219
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  18367181 taaagtcgtttttttatgacctatta-gggggtattccaa 18367219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 21692602 - 21692664
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||| ||||| ||||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  21692602 aaatttacagggg-gaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 21692664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 29724006 - 29724044
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  29724006 taaagtcgtttttttatgacctatta-gggggtattccaa 29724044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 39302041 - 39302079
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  39302041 taaagtcgtttttttatgacctatta-gggggtattccaa 39302079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 4352446 - 4352416
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  4352446 taaagtcgtttttttatgacctattaggggg 4352416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 18367159 - 18367125
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  18367159 tcgtttttttatgacctattaggggggaattccaa 18367125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 19158178 - 19158224
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||||||||||| |||||||||| | |||||||||||| ||||||||    
T  19158178 aaaatcaaaaatgacctatattacagggggtaaagcaccattaaccc 19158224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 22686881 - 22686851
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggg 58  Q
    |||||||||||||||||||||||||||||||    
T  22686881 taaagtcgtttttttatgacctattaggggg 22686851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 31343530 - 31343560
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  31343530 ttttttatgacctattaggggggtattccaa 31343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 37611407 - 37611373
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||| ||||||||||||||||||||||||||    
T  37611407 tcgtttttatatgacctattaggggggtattccaa 37611373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 38661538 - 38661575
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  38661538 aaagtcgtttttttatgacctatta-gggggtattccaa 38661575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 38687390 - 38687348
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| || ||||||| |||||||||||||||||||||||||    
T  38687390 aaaaatgacgtatattacaaggggtaaagcactattaaccctt 38687348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 45530664 - 45530694
Alignment:
Q  33 tcgtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||||    
T  45530664 tcgtttttttatgacctattaggggggtatt 45530694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 11961025 - 11961054
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggg 58  Q
    ||||||||||||||||||||||||||||||    
T  11961025 aaagtcgtttttttatgacctattaggggg 11961054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 13572579 - 13572534
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaacccttgaat 167  Q
    ||||| |||||||||| | |||||||| ||||||||||||||||||    
T  13572579 aaaatgacctatattacagggggtaaaacactattaacccttgaat 13572534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 18028277 - 18028318
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||| |||||||||||| |||||||||||| ||||||||||    
T  18028277 aaaatgacctatattatatggggtaaagcaccattaaccctt 18028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 19158013 - 19157928
Alignment:
Q  79 acagggggtaaat-aaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||||||| ||| |||  | |||| ||||| ||||| ||||||| |||||||| | | |||||||||||| ||||||||||    
T  19158013 acagggggtaaatcaaaaaaactattttacaggggggaaaaccaaaaatgacctatataacagggggtaaagcaccattaaccctt 19157928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 26538032 - 26537971
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    ||||||| ||| | ||||| ||||||| || ||||||| |||||||||||||| ||||||||    
T  26538032 aaatttacaggagggaaaaccaaaaatgacatatattacaaggggtaaagcaccattaaccc 26537971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 43383000 - 43383049
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| |||||| |||||||||| | |||||||||||| ||||||||||    
T  43383000 gaaaataaaaaatgacctatattacagggggtaaagcaccattaaccctt 43383049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 3448794 - 3448830
Alignment:
Q  31 agtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||| |||||||||||||||||| |||||||||||||    
T  3448794 agtcatttttttatgacctattaagggggtattccaa 3448830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 12719117 - 12719085
Alignment:
Q  131 tatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||| |||||||||||||||||||||||    
T  12719117 tatattatagggggtaaagcactattaaccctt 12719085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 13759427 - 13759387
Alignment:
Q  28 taaagtcgtttttttatgacctattag-gggggtattccaa 67  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  13759427 taaagtcatttttttatgacctattagagggggtattccaa 13759387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 30222105 - 30222145
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaaccct 162  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  30222105 aaaatgacctatattacagggggtaaagcactattaaccct 30222145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 31343601 - 31343665
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttgaat 167  Q
    |||| ||||| ||||| ||||| | |||||||||| | |||||||||||| ||||||||| ||||    
T  31343601 tttacaggggggaaaaccaaaagtgacctatattacatggggtaaagcaccattaaccctagaat 31343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 41708874 - 41708826
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  41708874 aaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 41708826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 45530715 - 45530771
Alignment:
Q  82 gggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatatta 137  Q
    ||||||||||||| ||||| |||| | ||||| ||||| ||||||||||||||||||    
T  45530715 gggggtaaataaaaaaatatattttacaggggggaaaaccaaaaataacctatatta 45530771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 308478 - 308517
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  308478 taaagtcgtttttttatgacctattaggggggtattccaa 308517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 21604249 - 21604119
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattcc--aannnnnnnnnnnacagggggtaaataaataaataaatttataggggagaaaatcaaaaataacc 130  Q
    |||||||||||||||||||||||||| ||||||  ||           ||||||||||||| || ||| ||| ||| ||||| ||||| ||||||| |||    
T  21604249 tcgtttttttatgacctattagggggttattccaaaaaaaaataatttacagggggtaaatcaa-aaaaaaaattacaggggggaaaaccaaaaattacc 21604151  T
Q  131 tatattataaggggtaaagcactattaaccct 162  Q
    ||||||||| |||||||||||| |||||||||    
T  21604150 tatattatagggggtaaagcaccattaaccct 21604119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 33936346 - 33936385
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33936346 taaagtcgtttttttatgacctattaggggggtattccaa 33936385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 10790237 - 10790198
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10790237 taaagtcgtttttttatgacctattaagggggtattccaa 10790198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 21604272 - 21604311
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  21604272 taaagtcgtttttttatgaactattaggggggtattccaa 21604311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 27967608 - 27967569
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  27967608 taaagtcgtttttttatgacctattagggggatattccaa 27967569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 29239612 - 29239573
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  29239612 taaagtcttttttttatgacctattaggggggtattccaa 29239573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 11336787 - 11336753
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  11336787 tcgtttttttatgacctattaggggggtattccaa 11336753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 21226882 - 21226916
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  21226882 tcgtttttttatgacctattaggggggtattccaa 21226916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 24602568 - 24602602
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  24602568 tcgtttttttatgacctattaggggggtattccaa 24602602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 18788872 - 18788952
Alignment:
Q  82 gggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||||||| ||| ||| ||| ||||| ||| | ||||||| |||||||||| || ||||||||||| ||||||||||    
T  18788872 gggggtaaataaaaaaaaaaaattacagggg-gaataccaaaaatgacctatattacaaagggtaaagcaccattaaccctt 18788952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 22362947 - 22362996
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||| ||||| |||||||||| | |||||||||||||||||||||||    
T  22362947 gaaaatcgaaaatgacctatattacagggggtaaagcactattaaccctt 22362996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 31826266 - 31826213
Alignment:
Q  110 gggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||| ||||||| |||||||||| | |||||||||||| ||||||||||    
T  31826266 gggagaaaaccaaaaatcacctatattacagggggtaaagcaccattaaccctt 31826213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 10366535 - 10366567
Alignment:
Q  35 gtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||    
T  10366535 gtttttttatgacctattaggggggtattccaa 10366567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 19412537 - 19412573
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattc 64  Q
    |||||||||| ||||||||||||||||||||||||||    
T  19412537 taaagtcgttattttatgacctattaggggggtattc 19412573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 26475809 - 26475761
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  26475809 aaaaccaaaaatgacctatattacaaggggtaaaacactattaaccctt 26475761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 29239624 - 29239656
Alignment:
Q  35 gtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||    
T  29239624 gtttttttatgacctattaggggggtattccaa 29239656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 33552744 - 33552828
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| | |||| | |||||||||||| |||||| |||||||||| | ||| |||| ||| |||||||||    
T  33552744 acagggggtaaataaaaaaaaatattttacaggggagaaaataaaaaatgacctatattacaggggataaaacaccattaaccct 33552828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 2181468 - 2181506
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  2181468 taaagtcgtttttttatgacctatta-gggggtattccaa 2181506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 7313600 - 7313638
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  7313600 taaagtcgtttttttatgacctatta-gggggtattccaa 7313638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 10366509 - 10366470
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  10366509 taaagtcgtttttttatgacctattaaggaggtattccaa 10366470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 11336812 - 11336850
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  11336812 taaagtcgtttttttatgacctatta-gggggtattccaa 11336850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 14974635 - 14974674
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  14974635 taaagtcatttttttatgacctattaggggggtatgccaa 14974674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 161
Target Start/End: Complemental strand, 18172604 - 18172475
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaannnnnnnnnnnacagggggtaaataaataaata--aatttataggggagaaaatcaaaaataacc 130  Q
    ||||| |||||||||||||||||||||||||||||           |||||||||||||||| |||||  |||||| |||||| |||| | ||||| |||    
T  18172604 tcgttattttatgacctattaggggggtattccaaattttttttttacagggggtaaataaa-aaataataatttacagggga-aaaaccgaaaatgacc 18172507  T
Q  131 tatattataagg-ggtaaagcactattaaccc 161  Q
    ||||||| | || |||||||||| ||||||||    
T  18172506 tatattacagggtggtaaagcaccattaaccc 18172475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 21226862 - 21226827
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtatt 63  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21226862 taaagtcgtttttttataacctattaggggggtatt 21226827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 24602488 - 24602429
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||| ||||| |||||  |||||| |||||||||| |||||||||||||| |||||||||    
T  24602488 tttacaggggggaaaacaaaaaatgacctatattacaaggggtaaagcaccattaaccct 24602429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Complemental strand, 24602558 - 24602527
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  24602558 tttttttatgacctattaggggggtattccaa 24602527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 31826328 - 31826366
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  31826328 taaagtcgtttt-ttatgacctattaggggggtattccaa 31826366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 33225483 - 33225440
Alignment:
Q  120 caaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||||||||||| | |||||||||||| ||||||||||    
T  33225483 caaaaataacctatattacagggggtaaagcaccattaaccctt 33225440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 64
Target Start/End: Original strand, 33352540 - 33352571
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattc 64  Q
    ||||||||||||||||||||||||||||||||    
T  33352540 tcgtttttttatgacctattaggggggtattc 33352571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 308456 - 308422
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||| ||||||||||||||||||    
T  308456 tcgtttttttatgaccaattaggggggtattccaa 308422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 2033108 - 2033162
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaacccttgaatt 168  Q
    ||||||| ||||| |||||||||||| |||||||| ||| |||||||||| ||||    
T  2033108 gaaaatcgaaaatgacctatattatagggggtaaaacaccattaaccctttaatt 2033162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 10790333 - 10790390
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccc 161  Q
    |||| |||||||||||| |||||| ||||||||||  ||||||||||||| ||||||||    
T  10790333 tttacaggggagaaaataaaaaatgacctatatta-caggggtaaagcaccattaaccc 10790390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 12292911 - 12292869
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactatta 157  Q
    |||||| ||||| || |||||||||||||||||||||||||||    
T  12292911 aaaatcgaaaatgacatatattataaggggtaaagcactatta 12292869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 13420440 - 13420482
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||||||||||||||||  ||||||||||| ||||||||||    
T  13420440 aaaaataacctatattatagagggtaaagcaccattaaccctt 13420482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 14487738 - 14487772
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||| ||||||||||||||||||||||||||    
T  14487738 tcgtttttgtatgacctattaggggggtattccaa 14487772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 18788794 - 18788760
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||| |||||||||||    
T  18788794 tcgtttttttatgacctattaggagggtattccaa 18788760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 19376122 - 19376058
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttgaatta 169  Q
    |||||||||| ||||| ||||||| |||||||||| | |||||||||||| |||||||||| |||||    
T  19376122 tttatagggg-gaaaaccaaaaatgacctatattaca-ggggtaaagcaccattaacccttcaatta 19376058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 19376207 - 19376249
Alignment:
Q  121 aaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| |||||||||||| |||||||||||| ||||||||||    
T  19376207 aaaaatgacctatattatagggggtaaagcaccattaaccctt 19376249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 18788815 - 18788844
Alignment:
Q  28 taaagtcgtttttttatgacctattagggg 57  Q
    ||||||||||||||||||||||||||||||    
T  18788815 taaagtcgtttttttatgacctattagggg 18788844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 19412448 - 19412399
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcac 152  Q
    |||| ||||| ||||| |||||||||||||||||| | ||||||||||||    
T  19412448 tttacaggggggaaaaccaaaaataacctatattacagggggtaaagcac 19412399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 25562201 - 25562152
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| |||||| |||||||||| | |||||||||||| ||||||||||    
T  25562201 gaaaataaaaaatgacctatattacagggggtaaagcaccattaaccctt 25562152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 26101715 - 26101666
Alignment:
Q  114 gaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| |||||| |||||||||| | |||||||||||| ||||||||||    
T  26101715 gaaaataaaaaatgacctatattacagggggtaaagcaccattaaccctt 26101666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 10545877 - 10545829
Alignment:
Q  115 aaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||||| ||||| |||||||||| | |||||||| ||||||||||||||    
T  10545877 aaaatcgaaaatgacctatattacagggggtaaaacactattaaccctt 10545829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 19418105 - 19418133
Alignment:
Q  28 taaagtcgtttttttatgacctattaggg 56  Q
    |||||||||||||||||||||||||||||    
T  19418105 taaagtcgtttttttatgacctattaggg 19418133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 31733259 - 31733346
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataagggg--taaagcactattaaccctt 163  Q
    ||||||||||||| || ||| | |||| | ||||| ||||| ||||||| |||||||||| ||||||  |||||||| ||||||||||    
T  31733259 acagggggtaaatcaaaaaaaatattttacaggggggaaaaccaaaaatgacctatattacaaggggggtaaagcaccattaaccctt 31733346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 33225515 - 33225543
Alignment:
Q  35 gtttttttatgacctattaggggggtatt 63  Q
    |||||||||||||||||||||||||||||    
T  33225515 gtttttttatgacctattaggggggtatt 33225543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 5405 - 5485
Alignment:
Q  82 gggggtaaataaataaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||||||| ||| ||| ||| ||||| ||| | ||||||| |||||||||| |||||||||||||| ||||||||||    
T  5405 gggggtaaataaaaaaaaaaaattacagggg-gaataccaaaaatgacctatattacaaggggtaaagcaccattaaccctt 5485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 5327 - 5293
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||| |||||||||||    
T  5327 tcgtttttttatgacctattaggagggtattccaa 5293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 5348 - 5377
Alignment:
Q  28 taaagtcgtttttttatgacctattagggg 57  Q
    ||||||||||||||||||||||||||||||    
T  5348 taaagtcgtttttttatgacctattagggg 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 14446 - 14506
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    |||| ||||| ||||||||||||| |||||||||| | |||||||||||| ||||||||||    
T  14446 tttacaggggggaaaatcaaaaatgacctatattacagggggtaaagcaccattaaccctt 14506  T

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Target: scaffold0192; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 14365 - 14403
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  14365 taaagtcgtttttttatgacctatta-gggggtattccaa 14403  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 83565 - 83526
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  83565 taaagtcgtttttttatgacctattagaggggtattccaa 83526  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 150123 - 150084
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  150123 taaaggcgtttttttatgacctattaggggggtattccaa 150084  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 150152 - 150183
Alignment:
Q  36 tttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||||    
T  150152 tttttttatgacctattaggggggtattccaa 150183  T

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Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 263254 - 263206
Alignment:
Q  110 gggagaaaatcaaaaataacctatattataaggggtaaagcactattaa 158  Q
    |||||||||  |||||| |||||||||| | ||||||||||||||||||    
T  263254 gggagaaaacaaaaaatgacctatattacagggggtaaagcactattaa 263206  T

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Target: scaffold1797 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 631 - 665
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  631 tcgtttttttatgacctattaggggggtattccaa 665  T

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Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 29593 - 29559
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  29593 tcgtttttttatgacctattaggggggtattccaa 29559  T

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Target: scaffold0111; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 29608 - 29637
Alignment:
Q  29 aaagtcgtttttttatgacctattaggggg 58  Q
    ||||||||||||||||||||||||||||||    
T  29608 aaagtcgtttttttatgacctattaggggg 29637  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 145461 - 145427
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  145461 tcgtttttttatgacctattaggggggtattccaa 145427  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 53419 - 53385
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||||||    
T  53419 tcgtttttttatgacctattaggggggtattccaa 53385  T

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Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 53441 - 53481
Alignment:
Q  28 taaagtcgtttt-tttatgacctattaggggggtattccaa 67  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  53441 taaagtcgttttttttatgacctattaggggggtattccaa 53481  T

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Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 53496 - 53580
Alignment:
Q  79 acagggggtaaataaataaataaattt-ataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccct 162  Q
    |||||||||||||||| ||| | |||| | ||||| ||||| ||||||| |||||||||| | ||||||||||||  ||||||||    
T  53496 acagggggtaaataaaaaaaaatattttacaggggggaaaaccaaaaatgacctatattacagggggtaaagcaccgttaaccct 53580  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 68791 - 68758
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggta 61  Q
    ||||||||||||||||||||||||||||||||||    
T  68791 taaagtcgtttttttatgacctattaggggggta 68758  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 68817 - 68850
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattcca 66  Q
    |||||||||||||||||| |||||||||||||||    
T  68817 tcgtttttttatgacctactaggggggtattcca 68850  T

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Target: scaffold0597 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 6397 - 6436
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  6397 taaagtcgtgtttttatgacctattagggggttattccaa 6436  T

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Target: scaffold0597; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 6375 - 6341
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||| |||||||||||||    
T  6375 tcgtttttttatgacctattaagggggtattccaa 6341  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 34886 - 34848
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  34886 taaagtcgtttttttatgacctattag-ggggtattccaa 34848  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 25183 - 25221
Alignment:
Q  28 taaagtcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  25183 taaagtcgtttttttatgacctatta-gggggtattccaa 25221  T

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Target: scaffold0375 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Complemental strand, 14092 - 14062
Alignment:
Q  37 ttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||||||    
T  14092 ttttttatgacctattaggggggtattccaa 14062  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 142409 - 142443
Alignment:
Q  33 tcgtttttttatgacctattaggggggtattccaa 67  Q
    |||||||||||||||||||||||||||| ||||||    
T  142409 tcgtttttttatgacctattaggggggtgttccaa 142443  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 432710 - 432772
Alignment:
Q  100 aaatttataggggagaaaatcaaaaataacctatattataag-gggtaaagcactattaaccc 161  Q
    |||||||||||||| |||||| ||||| |||||||||| | | ||||||| ||||||||||||    
T  432710 aaatttataggggataaaatcgaaaatgacctatattacaggagggtaaaacactattaaccc 432772  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 332104 - 332055
Alignment:
Q  122 aaaataacctatattataaggggtaaagcactattaacccttgaattatt 171  Q
    ||||| |||||||||| | |||||||| |||||||||| |||||||||||    
T  332104 aaaatgacctatattacagggggtaaaacactattaactcttgaattatt 332055  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 2889 - 2860
Alignment:
Q  28 taaagtcgtttttttatgacctattagggg 57  Q
    ||||||||||||||||||||||||||||||    
T  2889 taaagtcgtttttttatgacctattagggg 2860  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 149614 - 149585
Alignment:
Q  38 tttttatgacctattaggggggtattccaa 67  Q
    ||||||||||||||||||||||||||||||    
T  149614 tttttatgacctattaggggggtattccaa 149585  T

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Target: scaffold0430 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 12793 - 12861
Alignment:
Q  96 aaataaatttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaacccttg 164  Q
    ||||| |||||||||||  |||| |  |||| |||||||||| | |||||||| |||||||||||||||    
T  12793 aaatatatttatagggggtaaaaccggaaatgacctatattaaagggggtaaaacactattaacccttg 12861  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 18700 - 18641
Alignment:
Q  103 tttataggggagaaaatcaaaaataacctatattataaggggtaaagcactattaaccctt 163  Q
    ||||||||||| |||||| ||||| |||||||||| | | |||||| ||||||||||||||    
T  18700 tttatagggga-aaaatcgaaaatgacctatattacaggaggtaaaacactattaaccctt 18641  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 24935 - 24995
Alignment:
Q  102 atttataggggagaaaatcaaaaataacctatattataa-ggggtaaagcactattaaccc 161  Q
    |||||||||||  |||||||||| || ||||||||| || |||||||||| ||||||||||    
T  24935 atttatagggggcaaaatcaaaagtaccctatattacaagggggtaaagctctattaaccc 24995  T

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