View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2811R-Insertion-15 (Length: 330)
Name: NF2811R-Insertion-15
Description: NF2811R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2811R-Insertion-15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-175
Query Start/End: Original strand, 9 - 330
Target Start/End: Original strand, 35071238 - 35071559
Alignment:
| Q |
9 |
gacagtagtctcttgctactgccaaccgcatttatttccaaaatgcaccaaatctcattcatcatcatcgcgatcatcgccgccaccttcgtggtggccg |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35071238 |
gacagtagtctcttgctactgccaaccgcatttatttccaaaatgcaccaaatctcattcatcatcatcgcgatcatcgccgccaccttcgtggtggccg |
35071337 |
T |
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| Q |
109 |
acgatgacgccaccgtcatgcaaagccttcggcaatcccttaaaccttctcctaacggctggtcttccaatacttccttctgtcaatggtccggcgtcaa |
208 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35071338 |
acgatgacggcaccgtcatgcaaagccttcggcaatcccttaaaccttctcctaacggctggtcttccaatacttccttctgtcaatggtccggcgtcaa |
35071437 |
T |
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| Q |
209 |
atgctcatccgacaaccgcgtcaccagcataaacctctccgatcaaaagcttgccggtacccttcccgataatctcaactccctcactcaactcacaact |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
35071438 |
atgctcatccgacaaccgcgtcaccagcataaacctctccgatcaaaagctcgccggaacccttcccgataatctcaactccctcactcaactcacaact |
35071537 |
T |
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| Q |
309 |
ctctatctccaaaacaacgctc |
330 |
Q |
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|||||||||||||||||||||| |
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| T |
35071538 |
ctctatctccaaaacaacgctc |
35071559 |
T |
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