View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2811_1D_high_8 (Length: 284)
Name: NF2811_1D_high_8
Description: NF2811_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2811_1D_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 4467577 - 4467843
Alignment:
| Q |
7 |
ttgctgtcatgaaagattgaaggtatagtcaaaatattgacacactaacattaagaggttagttttgtttatttttaagatctatatataattgttcatt |
106 |
Q |
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| T |
4467577 |
ttgctgtcatgaaagattgaaggtatagtcaaaatattgacacactaacattaagaggttagttttgtttatttttaagatctatatataattgttcatt |
4467676 |
T |
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| Q |
107 |
tttaaaacaaaagtgtaggtggagttttttgttttgttgaaatactatcactattatgtagaaagagaaagcaaaaatgtaaaataacctggatttgatc |
206 |
Q |
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| T |
4467677 |
tttaaaacaaaagtgtaggtggagttttttgttttgttgaaatactatcactattatgtagaaagagaaagcaaaaatgtaaaataacctggatttgatc |
4467776 |
T |
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| Q |
207 |
tccggcagtgattacaagtgcaccttgttcaggacagaaagtcaaccaacttttctttgagtaaaca |
273 |
Q |
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| T |
4467777 |
tcccgcagtgattacaagtgcaccttgttcaggacagaaagtcaaccaacttttctttgagtaaaca |
4467843 |
T |
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