View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2811_1D_low_33 (Length: 236)
Name: NF2811_1D_low_33
Description: NF2811_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2811_1D_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 7 - 230
Target Start/End: Original strand, 9149579 - 9149802
Alignment:
| Q |
7 |
tcccatcagtttaaagaacatccaactttctgtagtgacaagaaggagaaaagcccgtatgcaccgctgccataagaagttagagaatgactgttttaac |
106 |
Q |
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| T |
9149579 |
tcccatcagtttaaagaacatccaactttctgtagtgacaagaaggagaaaagcccgtatgcaccgctgccataagaagttggagaatgactgttttaac |
9149678 |
T |
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| Q |
107 |
ttatatttaagttatcattcttagtcgattttgttccactgagctactgcaagagtaataaatttgagacattaattgttgaagcagtcaaatgggaaca |
206 |
Q |
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| T |
9149679 |
ttatatttaagttatcattcttagtcgattttgttccactgagctactgcaagagtaataaatttgagacattaattgttgaagcagtcaaatgggaata |
9149778 |
T |
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| Q |
207 |
tttacaaaaacctagtataattta |
230 |
Q |
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| T |
9149779 |
tttacaaaaacctagtataattta |
9149802 |
T |
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