View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2811_1D_low_34 (Length: 234)
Name: NF2811_1D_low_34
Description: NF2811_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2811_1D_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 42667614 - 42667420
Alignment:
| Q |
34 |
catcaaggacattgaagtacacacgtctttgaaaggaatgaacaagaagaagcaaggatcagaaacgcatcaatctgaaaagattgagaaaacaaaaaat |
133 |
Q |
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| T |
42667614 |
catcaaggacattgaagtacacacgtctttgaaaggaaagaacaagaagaagcaaggatcagaaacgcatcaatctgaaaagattgagaaaacaaaaaat |
42667515 |
T |
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| Q |
134 |
aacactgctgcagagagaaagaataaaaagttaattgtaacgaaggatgagaaaatgcaacaatctttgaaaggaaagaagaagcatagacataa |
228 |
Q |
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| T |
42667514 |
aacactgctgcagagagaaagaataaaaagttaattgtaacgaaggatgagaaaatgcaacaatctttgaaaggaaagaagaagcatagacataa |
42667420 |
T |
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